lowQualScore : 4 1 1 111 1 1 1111111111 33333 111 3333333333333333333 11111111111111 22222222222 1 11
lowQualScore : 0 7 7 2 2 777 0 6 7 3333333333 888888 5555 44444 555 0000000000000000000 33 66666666666666 0 5 555 7 2 7 5 88888888888 555 5 7 6 888 6 6 6 0 6 11 6 8
lowQualScore : . . . . . ... . . . .......... ...... .... ..... ... ................... .. .............. . . ... . . . . ........... ... . . . ... . . . . . .. . .
lowQualScore : 0 0 0 0 0 555 0 0 0 5555555555 888888 6666 55555 666 6666666666666666666 99 88888888888888 3 5 444 6 9 6 7 66666666666 000 1 7 0 777 0 0 0 2 8 22 0 2
consensus : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTAT---TA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAATTA----------TTTTAT------TATATACATGTATATA----ATTATAT-ATATATTC------------------ATTGTCGTGTT--A--------------AAATAAAGTACACGAGTAAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGAAGAAGAA---GTAG-AATAAGAAGNAAAAGG-A-G-GGAGG-AGA---AGAAGACTATACACAGTTTCTCATCAAAGTACAATGTTGCAGTAATATG--CATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGTACATACTTTAATATANAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
Reference ( gi|4 ) : CCACATCGGTTTTATATAATGACAGGAAACAGCTGCAACATCATTTATAATCATATCACTACTTCAATATGGATGTTTTAT---TA-AGTAATTCACTGCGAAAACTTTGGAATTCACTTAGAAACATTAATTA----------TTTTAT------TATATACATGTATATAAA--ATTATAT-ATATATTA------------------ATTGTCGTGTT--A--------------AAATAAAGTACACGAGTAAGCGTTCCCCTTGATTTTCCATTTCTAGTTATAAAAGAAGAAGAA---GGAG-AAAAAGAAGGAGAAGA-ATA-AGAAG-AGA---AGAATACTATACACAGTTTCTCATCAAACTACAATGTTGCAGTGATATG--TATATTTGAACACATAAACATAAAACGAGTTAAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTACTATAAAAATCCCACTTAA
gi|1 : CCACATCGGTTT-ATATTATGACAGGAAACAGCACCAACATCATTTATAATCATATCACTACTTCAATATAGATGTTTTATATTCACAGTAATTCACTGCGAAAACTTTGGAATTCTTTTAGATACATTAATTA----------TTTTATAACACACACACACANNNNNNNNNN--NNNNNNN-NNNNNNNN------------------NNNNNNNNNNN--NNNNNNNNNNNACACAAATAAAGTACACGA-TAAGCGTTCCCCTTGATTTTCCATTTCTAGTTATAGAAGAAGAAGAA---AGAGAAAAAAGAAGGAGAAGA-ATA-AGAAG-AGA---ACAAGACTAAACACAGTTTCTCATCAAACTACAATGTTGCAGTAATATG--CATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAAAAATCCCACTTA
gi|2 : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTAT---TA-AGTAATTCACTGCGAAAACTCTGGAAATCATTTAGATATTTTAATTA----------TTTTAT------NNNNNNNNNNNNNNNNNN--NNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNTCATTGTCGTGTT--A--------------AGATGAATTACACAAGTAAGCGCTCCCCTTGATTTTCCATTTCTAGTTATAAAAGAAGAAGAAAAAGGAG-AAACAGAAGGAGAAGA-A-------G-AGA---AGAAGACTATACACAGTTTCTCACCAAGCTACAATGTTGCAGTAATATG--CAAATTTAAACACATAAACAC--AACGAGTTGAATGACTAACATGTGAATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAATAATCCCACTT
gi|5 : CACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATAAAGATATTTTAT---TA-AGTAACTCATTGCGAAAACTCTGGAATTCATTTAGATGCATAAAGGAAGAGCACACGTCTGA--------AGAAATATATATATA------TATAG-AGATATTA------------------ATTGTCGTGTT--A--------------AAATAAAGTACACGGGTAAGCGCTCACATTGATTTTCCATTTCTAGCTATNNNNNNNNNNNNN---NNNN-NNNNNNNNNNNNNNNN-NNN-NNNNN-NNG---------CTATACACAGTTTCTCATCAAACTACAATGTTGCAGTAATATG--CATATTTAAACATATAAACACAAAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCATATACTATTATAATAACCCCACTTA
gi|3 : CACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTAT---TA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAATTA----------TTTTAT------TATATA----TATATA------TATAT-ATATCT---------------------TTGTCGTGTT--A--------------AAATAAAGTACACGAGTAAGCGTTCCCCTTGATTTTCCATTTCTAGTTAT
gi|6 : AAAACTTTGGAATTCATTTTGATACATTAATTA----------TTTTAT------TATATACATGTATATA----------T-ATATATTA------------------AA-GTAATATTCAA--------------AAATAAAGTACACGAGTTAGCGTTCCCCTTGATTTTCCATTTCTAGTTATNNNNNNNNNNNNN---NNNN-NNNNNNNNNNNNNNNN-NNN-NNNNN-NNN---NNN---CTATACACAGTTTCTCATCAAACTACAATGTTGCAGTAATATG--CATATTAAAACACATAAACACAAAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAATAATCCCACTTAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctatacacagtttttcatcaaactactatgttgcagtaatatgcatatttaaacacataaacacaaaacgagttgaatgactaacatgaacatattttaatataaagacataactatcacttccgatactatcataataataccactta
gi|11 : ATTAATTA----------TTTTAT------TATATA
gi|9 : ATTAATTA----------TTTTAT------TATATAttcattgtcgtgttaaaataaagtacacgagtaagcgttcctcttgattttccatttctagttatagaagaagcagaagtagaataaaaagaaaacggaggaggagaagaagactatacacagtttctcatcaaagtacaatgttgcagtaatatgcatatttaaacacataaacacaaaacgagttgaatgactaacatgtacatactttaatatatagacataactataccttccgatactattataagaatcccactta
gi|12 : ATTAATCA----------TTTTAT------TATATAttcattgtcgtgttaaaataaagtacacgagtaagcgttcctcttgattttccatttctagttatagaagaagaagaagtagaataagaagtaaaaggatgaggaggagaagaagactatacacagtttctcatcaaagtacaatgttgcagtaatatgcatatttaaacacataaacacaaaacgagttgaatgactaacatgtacatacttaaatataaacacataactataccttccgatactattataggaatcccactta
gi|7 : ATTAATTA----------TTTTAT------TATATAttcattgtcgtgttaaagtaaagtacacgagtaagcgttcctcttgattttccatttctagttatagaagaagaagaagtagaataagaagaaaaaggaggaggggaagaagactataaacagtttctcatcaaagacaatgttgaagtaatatgcatatttaaacacataaacacaaaacgagttgaatgactaacatgtgcatactttaatatagagacataactataccttccgatactattataagaatcccactta
gi|8 : ATAAATTA----------TTTTAT------TATATAattcattgtcgtgtttaaataaagtacacgagtaagcgttcctcttgattttccatttctagttatagaagaagaagaagtagaataagaagtaaaaggaggaggaggagaataagactatacacagtttctcatcaaagtacaaagttgcagtaatatgcatatttaaacacataaacacaaaaccagttgaatgactaacatgtacatacttaaatataaacacataactataccttccgatactattataagaatcccacttaa
gi|10 : TAATTA----------TTTTAT------TATATAttcattgtcgtgttaaaataaagtacacgagtaagagttcctcttgattttccatttctagttatagaagaagaataagtagaataaaaagtaaaagacggaggaggagaataagactatacacagtttctcatcaaagtacaaagttgcagtaatatgcatatttaaacacataaacacaaaacgagttgaatgactaacatgtacatacctaaatataaacacataactataccttccgatactattttaagaatcccactta
gi|13 : TAATTA----------TTTTAT------TATATAttcattgtcgtgttaaaataaagtacacgagtaagcgttcctcttgattttccatttctagttatagaagaagaagaagtagaataagaagtaaaaggaggaggaggagaagaagactatacacagtttctcatcaaagtacaatgttgcagtaatatgcatatttaaacacataaacacaaaacgagttgaatgactaacatgtacatacttaaatataaacacataactataccttccgatactattataagaatcccactta
gi|14 : TAATTA----------TTTTAT------TATATAttcattgttgtgttaaaataaagtacacgagtaagcgttcctcttgattttccatttctagttataatagaagaagtagaataagaagaaacaggagaaggagaagaagactatacacaggttctcatcaaagtacaatgttgcagtaatatgcatatttaaacacataaacacaaaacgagttgaatgacaaacatgtacatactttaatataaagacataactataccttccgatactattataagaatcccacttaa
gi|8 : ATAAATTATTTTATTATATATTC------------------ATTGTCGTGTT--A--------------AAATAAAGTACACGAGTAAGAGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGAAGAATAA---GTAG-AATAAAAAGTAAAAGACGGA-GGAGG-AGA---ATAAGACTATACACAGTTTCTCATCAAAGTACAAAGTTGCAGTAATATG--CATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGTACATACCTAAATATAAACACATAACTATACCTTCCGATACTATTTTAAGAATCCCACTTAttcattgtcgtgttaaaataaagtacacgagtaagcgttcctcttgattttccatttctagttatagaagaagaagaaaaaggaggtggagaagaagaatgtacacagtttctcatcaaagtacaatgttgcagtaatatgcatatttaaacacataaacacaaaacgagttgaatgactaacatgtacatactttaatataaagacataactataccttccgatactattataagaat
gi|12 : --ATTATA-----TATTC------------------ATTGTCGTGTT--A--------------AAGTAAAGTACACGAGTAAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGAAGAAGAA---GTAG-AATAAGAAGAAAAAGG---A-GGAGG-GGA---AGAAGACTATAAACAGTTTCTCATCAAA-GACAATGTTGAAGTAATATG--CATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGTGCATACTTTAATATAGAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|7 : attaatcatttt--ATTATAT-A---ATTC------------------ATTGTCGTGTT--T--------------AAATAAAGTACACGAGTAAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGAAGAAGAA---GTAG-AATAAGAAGTAAAAGG-AGG-AGGAGGAGA---ATAAGACTATACACAGTTTCTCATCAAAGTACAAAGTTGCAGTAATATG--CATATTTAAACACATAAACACAAAACCAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
gi|11 : attaattattttTTAT-T-ATATATTC------------------ATTGTCGTGTT--A--------------AAATAAAGTACACGAGTAAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGAAGCAGAA---GTAG-AATAAAAAGAAAACGG-A---GGAGG-AGA---AGAAGACTATACACAGTTTCTCATCAAAGTACAATGTTGCAGTAATATG--CATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGTACATACTTTAATATATAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|9 : attaattattTTAT-T-ATATATTC------------------ATTGTCGTGTT--A--------------AAATAAAGTACACGAGTAAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGAAGAAGAA---GTAG-AATAAGAAGTAAAAGG-ATG-AGGAGGAGA---AGAAGACTATACACAGTTTCTCATCAAAGTACAATGTTGCAGTAATATG--CATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAGGAATCCCACTTA
gi|10 : attaattattTTAT-T-ATATATTC------------------ATTGTCGTGTT--A--------------AAATAAAGTACACGAGTAAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGAAGAAGAA---GTAG-AATAAGAAGTAAAAGG-AGG-AGGAGGAGA---AGAAGACTATACACAGTTTCTCATCAAAGTACAATGTTGCAGTAATATG--CATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|13 : taattattTTAT-T-ATATATTC------------------ATTGTTGTGTT--A--------------AAATAAAGTACACGAGTAAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAATAGAAGAAGTA---GAAT-AAGAAGAAACAGGAGA-A------GG-AGA---AGAAGACTATACACAGGTTCTCATCAAAGTACAATGTTGCAGTAATATG--CATATTTAAACACATAAACACAAAACGAGTTGAATGACAAACATGTACATACTTTAATATAAAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
gi|14 : taattattTTAT-T-ATATATTC------------------ATTGTCGTGTT--A--------------AAATAAAGTACACGAGTAAGCGTTCCTCTTGATTTTCCATTTCTAGTTATA------GAAGAA---GAAG-AAAAAGGAGGTGGAGA-A----------GA---AGAATG---TACACAGTTTCTCATCAAAGTACAATGTTGCAGTAATATG--CATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGTACATACTTTAATATAAAGACATAACTATACCTTCCGATACTATTATAAGAAT
gi|15 : taattattTTAT-T-ATATATTC------------------ATTGTCGTTTT--T--------------AAATAAAGTACACGAGTAAGCGTTCCTCTTGATTTTCCATTTCTAGTTAAAGAAGAAGAAGAA---GTAG-AATAAGAAGAAAAAGG---A-GGAGG-AGA---AGAAGACTATAGACAGTTTCTCATCAAAGTACAATGTTGCAGTAATATG--CATATTTAAACACATAAACACAAAACGAGTT
gi|16 : aattatt-AAGAAGAAGTCGAAAG-ATGTAGAGG-AGGTGGAGAA--------AGAGGATCCCATCAAATTACAATGTTGCAGTAACATGAATTTAGTTAAACGCTTAACCAg
gi|3 : CTATACACAGTTTTTCATCAAACTACTATGTTGCAGTAATATG--CATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGAACATATTTTAATATAAAGACATAACTATCACTTCCGATACTATCATAATAATACCACTTA
Alignments
lowQualScore : 111 2222222222 33333333333333333333333333333333 22222222222222222222 111111111111 1111111
lowQualScore : 8 444 8 5555555555 99999999999999999999999999999999 8888888 11111111111111111111 333333333333 2 0 2 2 1 33 7777777 2 0 5555 2 33 5555 2 5555 99999999 1 22
lowQualScore : . ... . .......... ................................ ....... .................... ............ . . . . . .. ....... . . .... . .. .... . .... ........ . ..
lowQualScore : 0 000 0 0000000000 11111111111111111111111111111111 7777777 77777777777777777777 777777777777 5 4 5 2 9 44 6666666 5 9 3333 5 44 3333 5 3333 77777777 0 00
consensus : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAATTA----------TTTTATTATATACA---------TGTATATAA--TTAT---AT-AT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGNAAAAG--GA--GG--GAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATANAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
Reference ( family-4282 ) : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAATTA----------TTTTATTATATACA---------TGTATATAA--TTAT---AT-AT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGNAAAAG--GA--GG--GAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATANAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
gi|1 : CCACATCGGTTT-ATATTATGACAGGAAACAGCACCAACATCATTTATAATCATATCACTACTTCAATATAGATGTTTTATATTCACAGTAATTCACTGCGAAAACTTTGGAATTCTTTTAGATACATTAATTA----------TTTTATAACACACACACACANNNNNNNNNNNN--NNNN---NN-NN-------NNNN--------------------NNNNNNNNNNNNNNNNNNNNNNNACACAAATAAAGTACACGATAAGCGTTCCCCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAAGAGAAAAAAGAAGGAGAAG--AAT-AA--GAAGAGAA-CAAGACTAAACACAGTTTCTCATCAAACT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAAAAATCCCACTTA
gi|10 : TAA--TTATTTTATTAT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGTAAAAG--GA--GGAGGAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|11 : TAA--TTATTTTATTAT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGCAGAAGTAG-AATAAAAAGAAAACG--GA--GG---AGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATATAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|12 : at--TTAT----T-AT-------ATAT--------------------TCATTGTCGTGTTAAAGTAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGAAAAAG--GA--GG---AGGGGAA-GAAGACTATAAACAGTTTCTCATCAAAG-----ACAATGTTGAAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTGCATACTTTAATATAGAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|13 : attaatcattTAA--TTATTTTATTAT-------ATAT--------------------TCATTGTTGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATA----ATAGAAGAAGTAG-AATAAGAAGAAACAG--GA--GA---AGGAGAA-GAAGACTATACACAGGTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACAAACATGTACATACTTTAATATAAAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
gi|14 : TAA--TTATTTTATTAT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGA----------------AAAAG--GA--GG--T-GGAGAA-GAAGAATGTACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATAAAGACATAACTATACCTTCCGATACTATTATAAGAAT
gi|15 : --TTAT----T-AT-------ATAT--------------------TCATTGTCGTTTTTAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTAAAGAAGA-AGAAGAAGTAG-AATAAGAAGAAAAAG--GA---G--GAGGAGAA-GAAGACTATAGACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTG
gi|16 : aattattA-AGAAGAAGTCG-AA--AGATGTAGA-G--GA--GG--T-GGAGAAAGAGGA------------TCCCATCAAATT----ACAATGTTGCAGTAACATGA-ATTTAGT----TAA-ACGCTT----AACCA
gi|2 : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTCTGGAAATCATTTAGATATTTTAATTA----------TTTTATNNNNNNNN---------NNNNNNNNN--NNNN---NN-NN-------NNNNNNNNNNNNNNNNNNNNNNNNTCATTGTCGTGTTAAGATGAATTACACAAGT------------AAGCGCTCCCCTTGATTTTCCATTTCTAGTTATAAAAGA-AGAAGAAA----AAGGAGAAACAGAAG--GA--GAA-GAAGAGAA-GAAGACTATACACAGTTTCTCACCAAGCT----ACAATGTTGCAGTAATATGC-A--AATT----TAA-ACACAT----AAACAC----------AACGAGTTGAATGACTAACATGTGAATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAATAATCCCACTT
gi|3 : CACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAATTA----------TTTTATTATATA-------------TATATA----TAT---AT-AT-------ATCT-----------------------TTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCCCTTGATTTTCCATTTCTAGTTATNNNNNN-NNNNNNNNNNN-NNNNNNNNNNNNNNN--NN--NN--NNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNCTATACACAGTTTTTCATCAAACTACTA--TGTTGCAGTAATATGCATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGAACATATTTTAATATAAAGACATAACTATCACTTCCGATACTATCATAATAATACCACTTA
gi|4 : CCACATCGGTTTTATATAATGACAGGAAACAGCTGCAACATCATTTATAATCATATCACTACTTCAATATGGATGTTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCACTTAGAAACATTAATTA----------TTTTATTATATACA---------TGTATATAAAATTAT---AT-AT-------ATAT--------------------TAATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCCCTTGATTTTCCATTTCTAGTTATAAAAGA-AGAAGAAGGAG-AAAAAGAAGGAGAAG--AAT-AA--GAAGAGAA-GAATACTATACACAGTTTCTCATCAAACT----ACAATGTTGCAGTGATATGT-A--TATT----TGA-ACACAT----AAACATA--------AAACGAGTTAAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTACTATAAAAATCCCACTTAA
gi|5 : CACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATAAAGATATTTTA---TTA-AGTAACTCATTGCGAAAACTCTGGAATTCATTTAGATGCATAAAGGAAGAGCACACGTCTGA--AGAAATA---------TATATATA----TAT---AG-AG-------ATAT--------------------TAATTGTCGTGTTAAAATAAAGTACACGGGT------------AAGCGCTCACATTGATTTTCCATTTCTAGCTATNNNNNN-NNNNNNNNNNN-NNNNNNNNNNNNNNN--NN--NN--NNNNNNNG------CTATACACAGTTTCTCATCAAACT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACATAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCATATACTATTATAATAACCCCACTTA
gi|6 : AAAACTTTGGAATTCATTTTGATACATTAATTA----------TTTTATTATATACA---------TGTATATA----TAT---AT-ATTAAAGTAATAT--------------------TCA----------AAAATAAAGTACACGAGT------------TAGCGTTCCCCTTGATTTTCCATTTCTAGTTATNNNNNN-NNNNNNNNNNN-NNNNNNNNNNNNNNN--NN--NN--NNNNNNNN-NNN--CTATACACAGTTTCTCATCAAACT----ACAATGTTGCAGTAATATGC-A--TATT----AAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAATAATCCCACTTA
gi|7 : ATTAATTA----------TTTTATTATATA-------------------------------------------AT--------------------TCATTGTCGTGTTTAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGTAAAAG--GA--GGAGGAGGAGAA-TAAGACTATACACAGTTTCTCATCAAAGT----ACAAAGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACCAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
gi|8 : --TTAT----T-AT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGAGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAATAAGTAG-AATAAAAAGTAAAAGACGG--AG--GAGGAGAA-TAAGACTATACACAGTTTCTCATCAAAGT----ACAAAGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACCTAAATATAAACACATAACTATACCTTCCGATACTATTTTAAGAATCCCACTTA
gi|9 : ataaattattTAA--TTATTTTATTAT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGTAAAAG--GATGAG--GAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAGGAATCCCACTTA
Alignments
lowQualScore : 111 2222222222 33333333333333333333333333333333 22222222222222222222 111111111111 1111111
lowQualScore : 8 444 8 5555555555 99999999999999999999999999999999 8888888 11111111111111111111 333333333333 2 0 2 2 1 33 7777777 2 0 5555 2 33 5555 2 5555 99999999 1 22
lowQualScore : . ... . .......... ................................ ....... .................... ............ . . . . . .. ....... . . .... . .. .... . .... ........ . ..
lowQualScore : 0 000 0 0000000000 11111111111111111111111111111111 7777777 77777777777777777777 777777777777 5 4 5 2 9 44 6666666 5 9 3333 5 44 3333 5 3333 77777777 0 00
consensus : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAATTA----------TTTTATTATATACA---------TGTATATAA--TTAT---AT-AT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGNAAAAG--GA--GG--GAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATANAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
Reference ( family-4282 ) : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAATTA----------TTTTATTATATACA---------TGTATATAA--TTAT---AT-AT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGNAAAAG--GA--GG--GAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATANAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
gi|1 : CCACATCGGTTT-ATATTATGACAGGAAACAGCACCAACATCATTTATAATCATATCACTACTTCAATATAGATGTTTTATATTCACAGTAATTCACTGCGAAAACTTTGGAATTCTTTTAGATACATTAATTA----------TTTTATAACACACACACACANNNNNNNNNNNN--NNNN---NN-NN-------NNNN--------------------NNNNNNNNNNNNNNNNNNNNNNNACACAAATAAAGTACACGATAAGCGTTCCCCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAAGAGAAAAAAGAAGGAGAAG--AAT-AA--GAAGAGAA-CAAGACTAAACACAGTTTCTCATCAAACT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAAAAATCCCACTTA
gi|10 : TAA--TTATTTTATTAT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGTAAAAG--GA--GGAGGAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|11 : TAA--TTATTTTATTAT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGCAGAAGTAG-AATAAAAAGAAAACG--GA--GG---AGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATATAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|12 : at--TTAT----T-AT-------ATAT--------------------TCATTGTCGTGTTAAAGTAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGAAAAAG--GA--GG---AGGGGAA-GAAGACTATAAACAGTTTCTCATCAAAG-----ACAATGTTGAAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTGCATACTTTAATATAGAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|13 : attaatcattTAA--TTATTTTATTAT-------ATAT--------------------TCATTGTTGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATA----ATAGAAGAAGTAG-AATAAGAAGAAACAG--GA--GA---AGGAGAA-GAAGACTATACACAGGTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACAAACATGTACATACTTTAATATAAAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
gi|14 : TAA--TTATTTTATTAT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGA----------------AAAAG--GA--GG--T-GGAGAA-GAAGAATGTACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATAAAGACATAACTATACCTTCCGATACTATTATAAGAAT
gi|15 : --TTAT----T-AT-------ATAT--------------------TCATTGTCGTTTTTAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTAAAGAAGA-AGAAGAAGTAG-AATAAGAAGAAAAAG--GA---G--GAGGAGAA-GAAGACTATAGACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTG
gi|16 : aattattA-AGAAGAAGTCG-AA--AGATGTAGA-G--GA--GG--T-GGAGAAAGAGGA------------TCCCATCAAATT----ACAATGTTGCAGTAACATGA-ATTTAGT----TAA-ACGCTT----AACCA
gi|2 : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTCTGGAAATCATTTAGATATTTTAATTA----------TTTTATNNNNNNNN---------NNNNNNNNN--NNNN---NN-NN-------NNNNNNNNNNNNNNNNNNNNNNNNTCATTGTCGTGTTAAGATGAATTACACAAGT------------AAGCGCTCCCCTTGATTTTCCATTTCTAGTTATAAAAGA-AGAAGAAA----AAGGAGAAACAGAAG--GA--GAA-GAAGAGAA-GAAGACTATACACAGTTTCTCACCAAGCT----ACAATGTTGCAGTAATATGC-A--AATT----TAA-ACACAT----AAACAC----------AACGAGTTGAATGACTAACATGTGAATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAATAATCCCACTT
gi|3 : CACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAATTA----------TTTTATTATATA-------------TATATA----TAT---AT-AT-------ATCT-----------------------TTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCCCTTGATTTTCCATTTCTAGTTATNNNNNN-NNNNNNNNNNN-NNNNNNNNNNNNNNN--NN--NN--NNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNCTATACACAGTTTTTCATCAAACTACTA--TGTTGCAGTAATATGCATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGAACATATTTTAATATAAAGACATAACTATCACTTCCGATACTATCATAATAATACCACTTA
gi|4 : CCACATCGGTTTTATATAATGACAGGAAACAGCTGCAACATCATTTATAATCATATCACTACTTCAATATGGATGTTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCACTTAGAAACATTAATTA----------TTTTATTATATACA---------TGTATATAAAATTAT---AT-AT-------ATAT--------------------TAATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCCCTTGATTTTCCATTTCTAGTTATAAAAGA-AGAAGAAGGAG-AAAAAGAAGGAGAAG--AAT-AA--GAAGAGAA-GAATACTATACACAGTTTCTCATCAAACT----ACAATGTTGCAGTGATATGT-A--TATT----TGA-ACACAT----AAACATA--------AAACGAGTTAAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTACTATAAAAATCCCACTTAA
gi|5 : CACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATAAAGATATTTTA---TTA-AGTAACTCATTGCGAAAACTCTGGAATTCATTTAGATGCATAAAGGAAGAGCACACGTCTGA--AGAAATA---------TATATATA----TAT---AG-AG-------ATAT--------------------TAATTGTCGTGTTAAAATAAAGTACACGGGT------------AAGCGCTCACATTGATTTTCCATTTCTAGCTATNNNNNN-NNNNNNNNNNN-NNNNNNNNNNNNNNN--NN--NN--NNNNNNNG------CTATACACAGTTTCTCATCAAACT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACATAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCATATACTATTATAATAACCCCACTTA
gi|6 : AAAACTTTGGAATTCATTTTGATACATTAATTA----------TTTTATTATATACA---------TGTATATA----TAT---AT-ATTAAAGTAATAT--------------------TCA----------AAAATAAAGTACACGAGT------------TAGCGTTCCCCTTGATTTTCCATTTCTAGTTATNNNNNN-NNNNNNNNNNN-NNNNNNNNNNNNNNN--NN--NN--NNNNNNNN-NNN--CTATACACAGTTTCTCATCAAACT----ACAATGTTGCAGTAATATGC-A--TATT----AAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAATAATCCCACTTA
gi|7 : ATTAATTA----------TTTTATTATATA-------------------------------------------AT--------------------TCATTGTCGTGTTTAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGTAAAAG--GA--GGAGGAGGAGAA-TAAGACTATACACAGTTTCTCATCAAAGT----ACAAAGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACCAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
gi|8 : --TTAT----T-AT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGAGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAATAAGTAG-AATAAAAAGTAAAAGACGG--AG--GAGGAGAA-TAAGACTATACACAGTTTCTCATCAAAGT----ACAAAGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACCTAAATATAAACACATAACTATACCTTCCGATACTATTTTAAGAATCCCACTTA
gi|9 : ataaattattTAA--TTATTTTATTAT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGTAAAAG--GATGAG--GAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAGGAATCCCACTTA
blockSeqs : T . . AGAGCACACG CATGTATATAAAATTATAT TAAAGTA NNNNNNNNNNNNNNNNNNNN . T . T T AC GGAGG A ATAC T TT GCAG T ATTT TAAACACA A AC
blockSeqs : . . . . NNNNNNNNNNNNNNNNN . . . . . T A . GGAGG . . . . . . . . T AC
blockSeqs : . . . . TATATATATATATAG . . . . . T A . TGAGG . . . . . . . . G AC
blockSeqs : . . . . CATGTATATATATAT . . . . . T A . GAAG . . . . . . . . A AC
blockSeqs : . TATATATATAT . . . . . T A . TAAG . . . . . . . . A AC
blockSeqs : . . . . . . . G T . GGT . . . . . . . . T CA
blockSeqs : . . . . . N C . GGT . . . . . . . . A CA
blockSeqs : . . . . . A N . NNN . . . . . . . . T CA
blockSeqs : . . . . . N G . NNN . . . . . . . . T CA
blockSeqs : . . . . . N N . NNN . . . . . . . . T CA
blockSeqs : . . . . . T N . AGG . . . . . . . . A AC
blockSeqs : . . . . . T T . GG . . . . . . . . A AC
blockSeqs : . . . . . T T . GG . . . . . . . . A AC
blockSeqs : . . . . . . T . GA . . . . . . . .
blockSeqs : . . . . . GG . . . . . . .
blockSeqCons : *** CATGTATATATATAT***************** ************ AGG****
originalCons : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAATTA----------TTTTATTATATACA---------TGTATATAA--TTAT---AT-AT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGNAAAAG--GA--GG--GAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATANAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
finalCons : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAATTA----------TTTTATTATATACATGTATATATATAT-----------------AT-------ATAT--------------------TCATTGTCGTGTTAAAATAAAGTACACGAGT------------AAGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGNAAAAG--GAAGG----AGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATANAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
Alignments
lowQualScore : 111 11111 1111111111 777777777777777777777777777777777777777777777777777777777777 111111111111 2222222
lowQualScore : 8 444 8 11111 9999999999 555555555555555555555555555555555555555555555555555555555555 333333333333 2 0 2 2 1 1111111 2 0 5555 2 33 5555 2 5555 99999999 1 22
lowQualScore : . ... . ..... .......... ............................................................ ............ . . . . . ....... . . .... . .. .... . .... ........ . ..
lowQualScore : 0 000 0 11111 4444444444 111111111111111111111111111111111111111111111111111111111111 777777777777 5 4 5 2 9 9999999 5 9 3333 5 44 3333 5 3333 77777777 0 00
consensus : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAA-----TTA----------TTTTATTATATACA-----------TGTATATA----TAT-TAT-------ATAT-----------------TCATTGTCGTGTTAAAATAAAGTACACGAGTA------------AGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGNAAAAG--GA--AGGAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATANAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
Reference ( family-4282 ) : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAA-----TTA----------TTTTATTATATACA-----------TGTATATA----TATATAT-------ATAT-----------------TCATTGTCGTGTTAAAATAAAGTACACGAGTA------------AGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGNAAAAG--GA--AGGAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATANAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
gi|1 : CCACATCGGTTT-ATATTATGACAGGAAACAGCACCAACATCATTTATAATCATATCACTACTTCAATATAGATGTTTTATATTCACAGTAATTCACTGCGAAAACTTTGGAATTCTTTTAGATACATTAA-----TTA----------TTTTATAACACACACACACANNNNNNNNNNNNN----NNNNNNN-------NNNN-----------------NNNNNNNNNNNNNNNNNNNNNNNACACAAATAAAGTACACGATAAGCGTTCCCCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAAGAGAAAAAAGAAGGAGAAG--AAT-AAGAAGAGAA-CAAGACTAAACACAGTTTCTCATCAAACT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAAAAATCCCACTTA
gi|10 : ----TAT-TAT-------ATAT-----------------TCATTGTCGTGTTAAAATAAAGTACACGAGTA------------AGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGTAAAAG--GAGGAGGAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|11 : taattatttATTAA-----TTA----------TTTTATTATATA------------------------------------------T-----------------TCATTGTCGTGTTAAAATAAAGTACACGAGTA------------AGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGCAGAAGTAG-AATAAAAAGAAAACG--GA---GGAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATATAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|12 : ----TAT-TAT-------ATAT-----------------TCATTGTCGTGTTAAAGTAAAGTACACGAGTA------------AGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGAAAAAG--GA---GGAGGGGAA-GAAGACTATAAACAGTTTCTCATCAAAG-----ACAATGTTGAAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTGCATACTTTAATATAGAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTA
gi|13 : attaatcattt----TAT-TAT-------ATAT-----------------TCATTGTTGTGTTAAAATAAAGTACACGAGTA------------AGCGTTCCTCTTGATTTTCCATTTCTAGTTATA----ATAGAAGAAGTAG-AATAAGAAGAAACAG--GA---GAAGGAGAA-GAAGACTATACACAGGTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACAAACATGTACATACTTTAATATAAAGACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
gi|14 : taattattt----TAT-TAT-------ATAT-----------------TCATTGTCGTGTTAAAATAAAGTACACGAGTA------------AGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGA----------------AAAAG--G---AGGTGGAGAA-GAAGAATGTACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTTAATATAAAGACATAACTATACCTTCCGATACTATTATAAGAAT
gi|15 : taattattt----TAT-TAT-------ATAT-----------------TCATTGTCGTTTTTAAATAAAGTACACGAGTA------------AGCGTTCCTCTTGATTTTCCATTTCTAGTTAAAGAAGA-AGAAGAAGTAG-AATAAGAAGAAAAAG--G---AGGAGGAGAA-GAAGACTATAGACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTG
gi|16 : aattatttA-AGAAGAAGTCG-AA--AGATGTAGAGG------AGGTGGAGAAAGAGGA------------TCCCATCAAATT----ACAATGTTGCAGTAACATGA-ATTTAGT----TAA-ACGCTT----AACCA
gi|2 : CCACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTCTGGAAATCATTTAGATATTTTAATTATTTTA----------TNNNNNNNNNNNNN-----------NNNNNNNN----NNNNNNN-------NNNNNNNNNNNNNNNNNNNNNTCATTGTCGTGTTAAGATGAATTACACAAGTA------------AGCGCTCCCCTTGATTTTCCATTTCTAGTTATAAAAGA-AGAAGAAA----AAGGAGAAACAGAAG--GAG-AAGAAGAGAA-GAAGACTATACACAGTTTCTCACCAAGCT----ACAATGTTGCAGTAATATGC-A--AATT----TAA-ACACAT----AAACACA--------A--CGAGTTGAATGACTAACATGTGAATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAATAATCCCACTT
gi|3 : CACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATATGGATATTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCATTTAGATACATTAA-----TTA----------TTTTATTATATA---------------TATATA----TATATAT-------ATCT--------------------TTGTCGTGTTAAAATAAAGTACACGAGTA------------AGCGTTCCCCTTGATTTTCCATTTCTAGTTATNNNNNN-NNNNNNNNNNN-NNNNNNNNNNNNNNN--NN--NNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNCTATACACAGTTTTTCATCAAACTACTA--TGTTGCAGTAATATGCATATTTAAACACATAAACACAAAACGAGTTGAATGACTAACATGAACATATTTTAATATAAAGACATAACTATCACTTCCGATACTATCATAATAATACCACTTA
gi|4 : CCACATCGGTTTTATATAATGACAGGAAACAGCTGCAACATCATTTATAATCATATCACTACTTCAATATGGATGTTTTA---TTA-AGTAATTCACTGCGAAAACTTTGGAATTCACTTAGAAACATTAA-----TTA----------TTTTATTATATACA-----------TGTATATAAAATTATATAT-------ATAT-----------------TAATTGTCGTGTTAAAATAAAGTACACGAGTA------------AGCGTTCCCCTTGATTTTCCATTTCTAGTTATAAAAGA-AGAAGAAGGAG-AAAAAGAAGGAGAAG--AAT-AAGAAGAGAA-GAATACTATACACAGTTTCTCATCAAACT----ACAATGTTGCAGTGATATGT-A--TATT----TGA-ACACAT----AAACATA--------AAACGAGTTAAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTACTATAAAAATCCCACTTAA
gi|5 : CACATCGGTTT-ATATTATGACAGGAAACAGCAGCAACATCATTTATAATCATATCACTATTTCAATAAAGATATTTTA---TTA-AGTAACTCATTGCGAAAACTCTGGAATTCATTTAGATGCATAAA-----GGAAGAGCACACGTCTGA--AGAAATA-----------TATATATA----TATAGAG-------ATAT-----------------TAATTGTCGTGTTAAAATAAAGTACACGGGTA------------AGCGCTCACATTGATTTTCCATTTCTAGCTATNNNNNN-NNNNNNNNNNN-NNNNNNNNNNNNNNN--NN--NNNNNNNNNG------CTATACACAGTTTCTCATCAAACT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACATAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCATATACTATTATAATAACCCCACTTA
gi|6 : AAAACTTTGGAATTCATTTTGATACATTAA-----TTA----------TTTTATTATATACA-----------TGTATATA----TATATATTAAAGTAATAT-----------------TCA----------AAAATAAAGTACACGAGTT------------AGCGTTCCCCTTGATTTTCCATTTCTAGTTATNNNNNN-NNNNNNNNNNN-NNNNNNNNNNNNNNN--NN--NNNNNNNNNN-NNN--CTATACACAGTTTCTCATCAAACT----ACAATGTTGCAGTAATATGC-A--TATT----AAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATATTTTAATATATAGACATAACTATCACTTCCGATACTATTATAATAATCCCACTTA
gi|7 : ATTAA-----TTA----------TTTTATTATATA-----------------------------------------AT-----------------TCATTGTCGTGTTTAAATAAAGTACACGAGTA------------AGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGTAAAAG--GAGGAGGAGGAGAA-TAAGACTATACACAGTTTCTCATCAAAGT----ACAAAGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACCAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAAGAATCCCACTTAA
gi|8 : ----TAT-TAT-------ATAT-----------------TCATTGTCGTGTTAAAATAAAGTACACGAGTA------------AGAGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAATAAGTAG-AATAAAAAGTAAAAGACGG--AGGAGGAGAA-TAAGACTATACACAGTTTCTCATCAAAGT----ACAAAGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACCTAAATATAAACACATAACTATACCTTCCGATACTATTTTAAGAATCCCACTTA
gi|9 : ataaattatttATTAA-----TTA----------TTTTATTATATA------------------------------------------T-----------------TCATTGTCGTGTTAAAATAAAGTACACGAGTA------------AGCGTTCCTCTTGATTTTCCATTTCTAGTTATAGAAGA-AGAAGAAGTAG-AATAAGAAGTAAAAG--GATGAGGAGGAGAA-GAAGACTATACACAGTTTCTCATCAAAGT----ACAATGTTGCAGTAATATGC-A--TATT----TAA-ACACAT----AAACACA--------AAACGAGTTGAATGACTAACATGTACATACTTAAATATAAACACATAACTATACCTTCCGATACTATTATAGGAATCCCACTTA