lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111
lowQualScore : 1 333 1 2222 1 111111 1 11 1 22 2 11111 333333 222 222222222 1 1 111 4444444444 111 1 2222 1 1 22 33333 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 2222 1 1111111111111111111111111111111 22222222 1 333333 11111 1 222 2 1 333333 1 11 99999999999999999999999999999999999999999999999999999999999999999999999999999999999 1111111 1 555555 9999999 00000000000000000000000000000000000000000000 1 1 1 1111111 111111
lowQualScore : 7 3 3 111 6 3 5 7777 7777 0 6 1 6 5 3 888888 6 3 3 00 7 6 6 3 6 8 0 88 3 0 4 6 66666 0 000000 111 0 6 2 777777777 0 5 5 8 7 111 0 1 3 0 55 4 5 6666666666 3 333 6 6 9 3 4444 0 5 5 3 5 5 22 00000 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 5555 0 3 77 0000000000000000000000000000000 00000000 4 5 222222 2 9 11111 0 6 7 6 111 7 6 77 2 1 0 9 3 5 9 1 222222 1 33 1 88888888888888888888888888888888888888888888888888888888888888888888888888888888888 6666666 4 2 333333 4 33 0000000 2 7 0 77777777777777777777777777777777777777777777 66 3 7 8888 8 5 3 4444444 222222 66 8 99
lowQualScore : . . . ... . . . .... .... . . . . . . ...... . . . .. . . . . . . . .. . . . . ..... . ...... ... . . . ......... . . . . . ... . . . . .. . . .......... . ... . . . . .... . . . . . . .. ..... ..................................................................................................................................................... .... . . .. ............................... ........ . . ...... . . ..... . . . . ... . . .. . . . . . . . . ...... . .. . ................................................................................... ....... . . ...... . .. ....... . . . ............................................ .. . . .... . . . ....... ...... .. . ..
lowQualScore : 0 0 2 000 0 2 0 7777 3333 7 0 0 0 0 7 777777 0 3 7 33 3 7 0 3 0 0 8 00 2 8 4 0 77777 8 888888 000 6 6 2 000000000 8 4 0 0 0 777 4 2 4 2 88 9 1 1111111111 5 000 7 7 2 5 3333 9 9 0 5 4 0 55 00000 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 2222 8 9 99 0000000000000000000000000000000 77777777 9 0 999999 1 6 22222 6 6 1 0 000 1 0 99 9 7 7 1 3 0 6 7 999999 4 66 4 55555555555555555555555555555555555555555555555555555555555555555555555555555555555 2222222 4 9 111111 4 77 3333333 1 4 1 00000000000000000000000000000000000000000000 11 0 0 5555 9 2 9 4444444 888888 11 0 66
consensus : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTNGTGGGTTCAAGAGTGTTTTGGATACATCGACTAT-CCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGTCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCNATCTGCTCT-TCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATNAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATGTGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGTTCTGTCAAAAGAGACTGCGGAAC-CAAAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCA-CTGTTTTT--GAAGCATTATTTACAAGCAATGCAAAACTGCTATCTCTCGTCGGANGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTACTGAGG-A-GCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACAC-TGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATA-AAAAAA--N--CTAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATT---TATGGATCCATATCGACTAAAAAT--TCAGAATTTTGT---AAT-GG------------TCCGA--------ATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATA------CATTTNTATTTGTAATCAATATGAAAAAGTACAAATTTGCCTACGCATGATTTAACAGACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATC-GGATTTTGTAATAAGTAA--ACAAAAAATGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATTT-TATTTG--TAATCAATC--------TG--------------------AA-------A-A----N---T--AAA----AAAA------C------------AGGAG-------TATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CCA-AAA-TCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACTGAAG-----GT-------CTTGCAACATC----------C-------C--TTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
Reference ( gi|2 ) : ATTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTACTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTTA-CCTATCAATAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGAAGACGTATATGTGATGCTGAACCTGAGCCCTATTTCTACTCATGATGTCGTAAAAGGCTTTGGCAAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAAGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCGCAGTTAGGTTAATTTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTTTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGTGGAAC-CAAACTATGTCACCATTGTCAAAAAGCTTAAAGCATTACTTA-----GTTAACTTCCAATCA-TGGTTTTG--GAAGCATTATTTACTAGCAATACAAGACTGATGTCTCTCGTCGGAAGAGGTTTGTATCT-ATAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTAAATGGTTGGTTTGTACCAGTGTAAAGCAAATAATCTAGTTTGTACTGAGGCAGGCTTGTATATGTGTGGCACGTGAAAAATATTTAA-GGGCATTACTCATGTAGGTGAATCAGAGAC-TGTGTCAGATGATGTTTACATGCTTCTGCTAGTTTATCA----TATTGCAATGTATCAATTAACACCTTTATATTGTATTTACATATACGTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGAT--AAAAAA--C--CTAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATT---GATGGTTTCATATTGACTAAAAAT--TC---------T---AAT-GT------------TCCGA--------ATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAGATTCGACACTTATAGAGCTAGTATATA------CATTTTTATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATT-ATGGATCCGTATCGACTAAAAAATC-CAATTTTGTAATAAATAA--A-AAAAAATGGTCCAAAAATGAGAATTTGCCCCCACCTATTCCATGAAATCTAAAATTTTAGATCCGCCATTTATACAGCTTTTATGTACAAGT------ACATTT-TATTTG--TAATCAATC--------TG--------------------AA-------A-A----C---T-------------------C------------AGGAG-------TATAAGTGTAATTT-TAGGCTTTATTCCATAATTTACTT-AAA-TCACCAGTTTCGTTATACAATGTATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACTGAAT-----GT-------CT-------TC----------C-------C--TTCGGCATCTAACTAACAGATTATGAAGACA----AACC-TTTTCTGTAAAGAGGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAGAATGCGCCTTTCGACT
gi|1 : TGGACCTGAAAACTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTTGTGAATTCAAGAGTGTTTTGGATACATCGACTAT-TCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACAAATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTAGCCAATCCATCTGCTTTGTCTTACTTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TATATGAAAGTCCTCTGACGTCCAC--AGAAT-ATTTTCGCAGTTAGGTTAATCTGAACA-TTGTCTGGAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTATCTTGTATTTGCCCAATAACCTTGAATGTGT-TGCTCATGATGCCAGATACCGATTGCTCTATCTAAAGAGACTGTGAAAC-AAAATT-TGTCACCACTGTCAAAAAGCTTAAAGCATCACTAA-----GTTAACTTCCAATCA-CTGTTTTG--GAAGCATTATTTACTAGCAAGTCAAAACTGATGTCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGGAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGAAGTTTATATCATGTAAATGTAATAGATCAGCACTTTAAAGGTTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAGTGAGG-A---TTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGAGAC-TGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TATTGTAATGTATCAATTAACACCTTTATATTGTATTGACATATACTTTCTAATTATCTACATTTATTACATTGGGT
gi|7 : gtgtaaagTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCTACTAT-CCCATCAACAAAATGTAGAATACCTCAAGTCCAATACTGAGGAAGCAGACGTACATATGATGCTGAAGTTGAGTCCCATTTCTACTCATGATGTCGTAGAAGGATTTGGCCAATCTCTCTGTTCTCTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATGGCTCTTAATTCTATAAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCTCAGTAAGGTTAAACTGAATA-TTGTCTGAAGGGTGCTTCAGTTCATGTGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACACCAGATACGGATTGCTCTGTCAAAAGAGACTGCGGAA--CAAA--ATGTTATCATTGTCAAAAAGCTTAAAGCATCACTTA-----GTCAACTTCCAA--------CTTC--CAAACACTATTTACTAGCAATA----------------CGTCGTAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTATTTTACTGCTCAAGGAACCTGCTCTTAGTGTATTGGAGGAGTTTACATCATCTAAATGTAATAGATCAGCACTTTTAAGGGTTGGTTTGTACAAATGTAAAGCAAATAATCTAGTTTGTACT-AGACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagtgagatggatacatttattgctccatatcgactaacaattctaatggtccgaatttgcccatacccattccatgaaatataaaattctagattcgccacttatagaactagtatatacattttatttgttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagatattatggatccatatcggctaaaatatccgattttgtaataagtaaacaaaaaatggtccaaaaatgagtttgcccccacccattccatgaaatctaaaattttaaatccgccacttacaaagcttttatgtacaggtacattttatttgtaatcaatctgaaatagtgcaaatcgcaaaaaaaaaaagaagtcaggagtataagtgtaatttaatgctttattccattattcccaaaatcaccagttttgttatatatttcgatgtatttagccccaaaacttgaaagttataaaacaattctttagtactgaaggtcaagcaacatctcttggtcatcttactaacagattatgaagtgaaaccttttctgcacagagggtgctacatgcacttatttcttggcttcatataaaatgcgctcttcgacta
gi|10 : agtgtaaagTGTACCTGAAAATTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCG-CCTATCCTATAAACATTATGT--------TGAAGTCTGATACTGAAGAAGCAGACGTACGTATGATGCTG---TTGAGTCCCATTCCTACTCATGATGTCGTTGAAGGCTTTGGCCAATCAATCT---------TACCTGCATTTCAATATATCACTGGATTCTTAAGTTCTTCAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATTAAAGTCCCCTGACGTCCACCAAGAAGAATTCTCGCAGTTAGGTTAATCTGAACATTTGTCTGAAGGGTGCTTCAGTTCATGTAAGAAGTGCGTCTGTACCTTGTATTTGTCCAATAACCTTGAAtttaagggcattactcatgtgggtgaatcagagactgggtcagatgatgcttacatgctttttcttttattacattgggtatcatttctataatcaatatcaa
gi|16 : gtgtaaagCTGAAAACTGCCTGCTGGGAAAGCATTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCGACTAT-CCTGTCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTA
gi|14 : tattgtaaagtgccgCATATAAGAAGTTTGTCTGTGCCTTGTATGTTCCCAATAACTCTGAATGTAC-GTCTGGTGACACTAGAT-CTGATTATTGTATCAAAAGAGTTTGTGGAACGCAAA-TATGCCGCTAATGTCACACAGCTAAACGCATCACTTAAACGTGTTAAcgtat
gi|12 : CAATAGCCTTGAATTTGCATGTCGATGATGCCAGATACCGATTGTTTTGTTAAAAGAGACTGCGGAA--CAAAATATACCACCATTTTCAAAAAACTTTAAGCGTCACTTA-----G--AACT-----------GTTTTT--AAAGCGTTCTTTACAAGCAATACAAAA--------TCTTG-------------GTATTTCAAAAATAATATTTTGAAA---ATGCTTCTGGTGCCCAAGGAACCTGCTTCAAGAGGATTGGTTGAGATTACATCATGTAAATGT--TGG----------TG---GGTTGGTTTTGGCCAATAAAAAGCAAACACTCCAGTTTGTACTG----AGGCTTGTGTATGTATGACACGTtctgacatcttcagtaaaaagaaaatggtatctcgaaattaataccctgacgcccaaaaatcatacttcaagtagattgattgcgcttacatcgcgtaaatataacaggtcagcatagttgtgccagtgtaaaacaa
gi|17 : AATATGC-TGCTGATGACGCCAGATACCGATTGTTCTGTCAAAAGAGACTGCGGAA--CAAAATATGTCACCGATGTCAAAAAGCTTAAA
gi|3 : TCACTTA-----GTTGACTTCCAATCA-CTGTTTTTTTGACGCATTATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGATGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATTT-AATGTAAAAGATCAGCACTTTTAATGGTTGATTTGTAACAATATAAAGCAAATAATCTAGTTTGCAC--AG--ATGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACAC-TGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTAATTATCTAC--TTA-CACATTGGGTATTATTTCTGATA-AAAAAA--A--CTAAACATAGTCTcggtaaccaaaatgctaat
gi|4 : ACTTA-----GTTGACTTCCAATCACTGTTTTTT--GACGCAATATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTTGAGTTTACATCATTAAAATGTAAAAGATCAACACTTTTAATGGTTGATTTGTAACAATGTAAAGCAAATAATCTAGTTTGCAC--AG--ATGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACAC-TGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTTATTATCT--TCTTA-CACATTGGGTATTATTTCTGATA-AAAAAA--A--CTAAACATAGTCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactgattcatatcgactaaaatttcagaattttgtaatggtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaagtacagatttgcatgagttaacagactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgccccaaccaaatccatgaaatctaaaattttagatccgccccttatagagctattatgtgcaaatcatgtgacatttcatttgctaacaatctgaaatagtgcaaatcacaaaaaaaaaacaggagtataagagtaattttaggctttattccattattctcaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacattccttgggcatcttactcacagattatgaagttaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctatttgac
gi|14 : TGGTATCTCGAAATTAATACC-CTGACGCCCAAAAATCATACTTCAAGTAGATTGATTGCGCTTACATCGCGTAAATATAACAGGTCAGC-------ATAG-----TTGTGCCAGTGTAAAACAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagtgagatggatacatttactgattcatatcgactaaaatttcagaattttgtaatagtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaggtacagatttgcatgagttaacatactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgcccccaccaaatccatgaaatctaaaattttagatccggctcttatagagctattatgtacaaatcatgtgacattttatttgcttacaatctgaaatagtgcaaatcacaaaaaaaacaggagtataagtgtaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacatcccttgggcatctatctcacagattatgaagtcaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctctttgac
gi|5 : catataagaagtttgtctgtgccttgtatgttcccaataactctgaatgtacgtctggtgacactagatctgattattgtatcaaaagagtttgtggaacgcaaatatgccgctaatgtcacacagctaaacgcatcacttaaacgtgttaatctgacatcttcagtaaaaagaaaaTGCTCTTAGAATATTGGTGGAGTTTACATCATGTTAATGCAATAGATCAGCACATAAAACGGTTGATTTGTATCACTGTAAAGCAAATAATCTAGTTAGTACTGAGGT----TTGTATATGTATGGCACGTGAAAAATGTTTAAAGGGCATTACTCATGTAGATGAATTAGACACCTG-GTAAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTGTATTAACATATACTTTCTAAGTATCTTCTTTTATTACATTGGGTATTATTTCTGAT--AAAAAAAACAACTAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATT---TATGGATCCATATCGACAAAAAAT--TCAGAATTTTGT---AAT-GG------------TCCGA--------ATTTGCCCCCACCCATTCCATGAAATATAAAATTCTGGATTCGCCATTTATAGAGCTAGTATATA------CATTTTTATTTGTAATCAATATAAAAAAGTACAAATTTGCCTACGCATGATTTAACAAACTGATGTAAGATAAAAACATTAATGGATCCATATCGACTAAAAAATC-AGACTTTGTAATAAGTAAACA-AAAAAATATTCCGAAAATGAGAATTTGCCAACACCCATACCA-GAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTAAGTACAAGT------ACATTT-TATTTG--TTATCAATC--------TG--------------------AA-------A-AAGTGCAAATCGCAACAAAAAAA------C------------AAGAG-------TATAAGTGCAATTT-TAGGCTGTATTCCATTATTC-CCA-AAA-TCACCAGTTTCG-------ATATATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCATAATTCTTTAGGACTGAAG-----GT-------CTTGCAACATC----------C-------C--TTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCATCTAGTTC--TAGGCTTCATATAAAAATGCACTCTTCGACT
gi|6 : TGTATTGGTGGAGTTTACATCATGTAAATGTAACAGATCAGCTCTTTAAAGGGTTGGTTTGTACCAATGTTAAGCAAGTAATCTAGTTTGTACTGAGGC----TTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTTAATCAGACAC-TGGGTCAGTTGCTGTTCACATGCTTCTGCTAGTTTATCG----TATTGTAATGTACCAATTAACACCTTAATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA--C--CTAAGCATTATCT
gi|7 : AGACATTTAA-GGGCATTACTCATGTGGGTGAATCAGAGAC-TGGGTCAGATGATGCTTACATGCTTTTTCT--TTTATTA----CATTG---GGTATCATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagtgagatggatacatttatggatctatatcgactaaaaatactaatggtccgaatttgcccctacccattccatgaaatataaaattctaagttcgccacttatagagctagtagatacacttttattagttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagacattatggatagatatcgactaaaaaatccgattttgtaatgagtaaacaaaaaatggtccaaaaatgaaaatttgcccccacccattccatgaaatctaaaattttagatctgccaattatagatcttttatgtacaagtacattttatttgtaatcaatctgaaatagtgcaaaaaatcgcaaaaacatcaggagtataagtgaaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccccaaaacttaagatataccacatttctttagtactgaaggtcttgcaacatcctttgggcatctaactaacagattatgaagtcaaaccttttctgtacagagggtgctacgtgcaactatttctaggcttcatataaaaatgagctcttcgacta
gi|8 : agtgtaaagtggacctgaaaactgcctgctgggaaagcagttttctccaggttgtgggttcaagagtgttttggatacatctactatcccatcaacaaaatgtagaatacctcaagtccaatactgaggaagcagacgtacatatgatgctgaagttgagtcccatttctactcatgatgtcgtagaaggatttggccaatctctctgttctctcttacctgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatggctcttaattctataaaagtcctctgacgtccaccgagaagaattgtctcagtaaggttaaactgaatattgtctgaagggtgcttcagttcatgtgagaagtgcgtctgtaccttgtatttgcccaataaccttgaatgtgctgctgatgacaccagatacggattgctctgtcaaaagagactgcggaacaaaatgttatcattgtcaaaaagcttaaagcatcacttagtcaacttccaacttccaaacactatttactagcaatacgtcgtaagaggttggtatctaaagctggtactttgaaaattattttactgctcaaggaacctgctcttagtgtattggaggagtttacatcatctaaatgtaatagatcagcacttttaagggttggtttgtacaaatgtaaagcaaataatctagtttgtactTACATGCTTCTTCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTTTATTTACAAATACTTTCTATTTATCTACATTTTTTACAATGGATATTAATTTTGAT--TAActataatcaatatcaa
gi|7 : CTTTTATTACATTGGGTATCATTTCT-AT--AAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatataatcaaggatccatatcgactaaacattcagaatgctgtaatagtaaataaaaatggtccgagaatgagaatttgccccaaccctttccatgatttctaaaattttagatccgccatttatagagctattttgtaacacttcatttgtatttgtaatcaatcggaaatagtgcaa
gi|1 : agtgtaaagtggacctgaaaactgcctgctgggaaagcagttttctccaggttgtgggttcaagagtgttttggatacatctactatcccatcaacaaaatgtagaatacctcaagtccaatactgaggaagcagacgtacatatgatgctgaagttgagtcccatttctactcatgatgtcgtagaaggatttggccaatctctctgttctctcttacctgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatggctcttaattctataaaagtcctctgacgtccaccgagaagaattgtctcagtaaggttaaactgaatattgtctgaagggtgcttcagttcatgtgagaagtgcgtctgtaccttgtatttgcccaataaccttgaatgtgctgctgatgacaccagatacggattgctctgtcaaaagagactgcggaacaaaatgttatcattgtcaaaaagcttaaagcatcacttagtcaacttccaacttccaaacactatttactagcaatacgtcgtaagaggttggtatctaaagctggtactttgaaaattattttactgctcaaggaacctgctcttagtgtattggaggagtttacatcatctaaatgtaatagatcagcacttttaagggttggtttgtacaaatgtaaagcaaataatctagtttgtactagacatttaagggcattactcatgtgggtgaatcagagactgggtcagatgatgcttacatgctttttTAGTGAGATGGATACATT---TATTGCTCCATATCGACTAACAAT--TC---------T---AAT-GG------------TCCGA--------ATTTGCCCATACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAACTAGTATATA------CATTTT-ATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGATATT-ATGGATCCATATCGGCTAAAATATC-CGATTTTGTAATAAGTAA--ACAAAAAATGGTCCAAAAATGAG--TTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAAATCCGCCACTTACAAAGCTTTTATGTACAGGT------ACATTT-TATTTG--TAATCAATC--------TG--------------------AAATAGTGCA-A----A---T-------------------CGCAAAAAAAAAAAGAAGTCAGGAGTATAAGTGTAATTT-AATGCTTTATTCCATTATTC-CCA-AAA-TCACCAGTTTTGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTGAAAGTTATAAAACAATTCTTTAGTACTGAAG-----GTCAAGCAACA-------TC----------T-------C--TTGGTCATCTTACTAACAGATTATGAAGTGA----AACC-TTTTCTGCACAGAGGGTGCT-------ACA------TGCACTTATTTC--TTGGCTTCATATAA-AATGCGCTCTTCGACTtcaatatcaa
gi|6 : gtgtaaagtggacctgaaaactgcctgctaggaaagcagttttctccaggttgtgaattcaagagtgttttggatacatcgactattctatcaacaaaatgtagaatacctcaagtccgatactgaggaagcagacgtacaaatgatgctgaagttgagccccattcctactcatgatgtcgtagaaggctttagccaatccatctgctttgtcttacttgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatagctcttaatatatgaaagtcctctgacgtccacagaatattttcgcagttaggttaatctgaacattgtctggagggtgcttcagttcatatgagaagtgcgtctgtatcttgtatttgcccaataaccttgaatgtgttgctcatgatgccagataccgattgctctatctaaagagactgtgaaacaaaatttgtcaccactgtcaaaaagcttaaagcatcactaagttaacttccaatcactgttttggaagcattatttactagcaagtcaaaactgatgtctctcgtcggaagaggttggtatctaaagctggtactttggaaattcttctggtgctcaaggaacctgctcttagtgtattggtgaagtttatatcatgtaaatgtaatagatcagcactttaaaggtttggtttgtaccaatgtaaagcaaataatctagtttgtagtgaggattgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggtgaatcagagactgggtcagatgatgcttacatgcttctgctagtttatcatattgtaatgtatcaattaacacctttatattgtattgacatatactttctaattatctacatttattacattgggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAGTGAGATGGATACATT---TATGGATCTATATCGACTAAAAAT--AC---------T---AAT-GG------------TCCGA--------ATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAAGTTCGCCACTTATAGAGCTAGTAGATA------CACTTTTATTAGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATT-ATGGATAGATATCGACTAAAAAATC-CGATTTTGTAATGAGTAA--ACAAAAAATGGTCCAAAAATGAAAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCTGCCAATTATAGATCTTTTATGTACAAGT------ACATTT-TATTTG--TAATCAATC--------TGAAATAGTGCAAAAAATCGCAAA-------A-A----CA--T-------------------C------------AGGAG-------TATAAGTGAAATTT-TAGGCTTTATTCCATTATTC-CCA-AAA-TCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAGA--TATACCACATTTCTTTAGTACTGAAG-----GT-------CTTGCAACATC----------C-------T--TTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCAACTATTTC--TAGGCTTCATATAAAAATGAGCTCTTCGACTa
gi|4 : tgtattggtggagtttacatcatgtaaatgtaacagatcagctctttaaagggttggtttgtaccaatgttaagcaagtaatctagtttgtactgaggcttgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggttaatcagacactgggtcagttgctgttcacatgcttctgctagtttatcgtattgtaatgtaccaattaacaccttaatattgtatttacatatactttctaattatctacttttattacattgggtattatttctgataaaaaaaacctaagcattatctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntAGTGAGATGGATACATT---TACTGATTCATATCGACTAAAATT--TCAGAATTTTGT---AAT-AG------------TCCGA--------ATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATA------CATTTCTATTTATAAGCAATATGAAAAGGTACAGATTT------GCATGAGTTAACATACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATC-AGATTTTGTAATAAGTAA--ACAAAAAATGGTCCGAAAATGAGAATTTGCCCCCACCAAATCCATGAAATCTAAAATTTTAGATCCGGCTCTTATAGAGCTATTATGTACAAATCATGTGACATTT-TATTTGCTTA--CAATC--------TG--------------------AA-------ATA----G---TGCAAATCACAAAAAAAA--C------------AGGAG-------TATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CCA-AAA-TCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACAGAAG-----GT-------CTTGCAACATC----------C-------C--TTGGGCATCTATCTCACAGATTATGAAGTCA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTCTTTGACa
gi|8 : acttagttgacttccaatcactgttttttgacgcaatatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctggtgctcaaggaacctgctcttagtgtattggttgagtttacatcattaaaatgtaaaagatcaacacttttaatggttgatttgtaacaatgtaaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttcttattatcttcttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncAGATGTATATAAT---CAAGGATCCATATCGACTAAACAT--TCAGAATGCTGT---AATAGTAAATAAAAATGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACTTCATTTGTATTTGTAATCAATCGGAAATAGTGCAA
gi|9 : tacatgcttcttctagtttatcatactgtaatgtatcaataaacacctttatattttatttacaaatactttctatttatctacattttttacaatggatattaattttgattaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntACATTCAGAATGCTGTAATAGTAAATAAAAATGGTC---------CGAGAAT-G---------------AGA--------ATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACTTCATTTGTATTTGTAATCAATCGGAAATAGTGCAAA
gi|3 : atcaaggatccatatcgactaaTTCATATCGACTAAAATT--TCAGAATTTTGT---AAT-GG------------TCCGA--------ATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATA------CATTTCTATTTATAAGCAATATGAAAAAGTACAGATTT------GCATGAGTTAACAGACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATC-AGATTTTGTAATAAGTAA--ACAAAAAATGGTCCGAAAATGAGAATTTGCCCCAACCAAATCCATGAAATCTAAAATTTTAGATCCGCCCCTTATAGAGCTATTATGTGCAAATCATGTGACATTT-CATTTGC-TAA-CAATC--------TG--------------------AA-------ATA----G---TGCAAATCACAAAAAAAAAAC------------AGGAG-------TATAAGAGTAATTT-TAGGCTTTATTCCATTATT--CTCAAAA-TCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACAGAAG-----GT-------CTTGCAACATT----------C-------C--TTGGGCATCTTACTCACAGATTATGAAGTTA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTATTTGACccaaaacattaaacaagagtataaatgttattttagacgttattccattattctcaaaatcaccagattcgttatacatttcgatgtaaagttatactacaattcttaagtactgaagttcttgcaacatcctttgggcatctaattagcagattatgaagtcaaaccttttctatatagacagtgctactagcacctattttaggcttcatatagaaatgcgctcttcaac
gi|9 : tcacttagttgacttccaatcactgtttttttgacgcattatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctgatgctcaaggaacctgctcttagtgtattggtggagtttacatcatttaatgtaaaagatcagcacttttaatggttgatttgtaacaatataaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttctaattatctacttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactgaATC-AAGGATCCATATCGACTAAACATTCAGAATGCTGTAAT-AGTAA--A-TAAAAATGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATTTGTATTTG--TAATCAATCGGAAATAGTG--------------------CA-------A-A----C---CAAAACATTAAA--------C------------AAGAG-------TATAAATGTTATTT-TAGACGTTATTCCATTATT--CTCAAAA-TCACCAGATTCGTTATAC-------ATTTCGATGT------------------AAAGTTATACTACAATTCTTAAGTACTGAAG-----TT-------CTTGCAACATC----------C-------T--TTGGGCATCTAATTAGCAGATTATGAAGTCA----AACC-TTTTCTATATAGACAGTGCT-------ACT------AGCACCTATTT---TAGGCTTCATATAGAAATGCGCTCTTCAAC
gi|8 : ATC-AAGGATCCATATCGACTAAACATTCAGAATGCTGTAAT-AGTAA--A-TAAAAATGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATTTGTATTTG--TAATCAATC--------GG--------------------AA-------A-
gi|13 : tacatgcttcttctagtttatcatactgtaatgtatcaataaacacctttatattttatttacaaatactttctatttatctacattttttacaatggatattaattttgattaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatata--------------------AA-------A-A----A---T-------------------C------------AGGTG-------TATAAGTGTAATTT-TAGGCTTTATTCCATTATTT-CCA-AAA-TCACCAGTTTCATTATA-------TATTTTGATGTATTTAGCCCCAAAACTTTAAAGTTATACCACAATTCTTTAGTACTGAAG-----GT-------CT-------TG----------CAACATCAC--TTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGAACAGAGGGTGAT-------ACG------TGCACCTTTTTC--TAGGCTTCACATAAAAATGCGCTTTTCGACtagtgcaa
gi|11 : ttacattgggtatcatttctataatcaatatcaaatagtgcaaatcgcaaA-------A-A----C---T-------------------T------------AAGAG-------TTCCTGTGTTATTTCTAAA-TTTATTAAATGATTTTCTA-AAA-TCACCCGATTCGT-----AATATATGCT--AGTGCATTTTACCGCAGAACGAAAGAGATATATCACAATTCTTTAATACTTAATCTAAGGT-------CC-------TG----------CAACAAT-C--TTTAGCATCCAACGAAC--AT-----AGTCA----AACA-TTGTCTCTACTGACGGAGCTACACAACACG------TGTACCTATATC--TAAGCTTCTTATAAG
gi|15 : atttgcatcgactgatccatacctggcctgaaatgttggatctgtcctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntAAGTATAATTT-CAAAACATATTCAAAAACTT--TT-AAAATCACGAGTTCCA--ATA------ATATTATAATATTTTCGGTCCCAAA-CTAGAAAGTTATACCA-AGTTCTTTACTTTTTAAT-----GT-------TC-------TCAAAAAAAAAAC-------CGTTTTGGCATCGAACTAACACCTTTTATAGTCA----AAC
gi|18 : aatgtgttataaatccaagatagtgaaaagctatacaaattactaggcggccCTAACA---TAT-AAGTCAGTATAACC-TTTTCTGTACAGACGATGCT-------ACGTGAACTTGCATCTATTTTTGTAGACTTCTTATAAAAATACACTTTTCGA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 3 1 1 11 11111 111 111 33333 111 2222 111 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 333333333 1 222222 11111 11 11111111 55555555555555555555555555555555555555555555555555555555555 1111111 11111 111111 1111111 111111
lowQualScore : 1 0 3 2 1 22 0 0 0 1 22 3 1 0 6 77 3 1 44444 3 777 4 2 3 6 3 3 6 000 2 2 2 3 11111 333 4444 1 1 3 3 77 1 444 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 888888888 7 4 6 4 66 9 0 3 0 3 5 0 0 555555 11111 8 66 00 66666666 22222222222222222222222222222222222222222222222222222222222 4 4 4 3333333 1 5 00000 111111 7777 8 2 3333333 111111 55
lowQualScore : . . . . . .. . . . . .. . . . . .. . . ..... . ... . . . . . . . ... . . . . ..... ... .... . . . . .. . ... ..................................................................................................................................................... ......... . . . . .. . . . . . . . . ...... ..... . .. .. ........ ........................................................... . . . ....... . . ..... ...... .... . . ....... ...... ..
lowQualScore : 0 8 2 5 0 88 2 0 0 0 88 2 0 0 7 55 2 0 33333 2 333 0 2 2 7 2 3 7 000 8 6 6 2 99999 000 3333 0 7 6 2 44 0 000 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 555555555 5 0 7 0 55 4 0 2 2 2 0 8 2 666666 11111 9 11 66 11111111 00000000000000000000000000000000000000000000000000000000000 0 0 0 0000000 0 8 00000 555555 7777 0 5 0000000 555555 55
consensus : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGCGGAACCAAAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACNAGCAATACAAAACTG-TATCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTACTGAGG---GCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGAT-AAAAAAAAC---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTTTATTTGTNATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGACTGNTGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATC--------TGAAAT------AG-------------TGCAAATC-C---A-AAA----AAA------------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
Reference ( family-3898 ) : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTNGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGTCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCNATCTGCTCT-TCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATNAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATGTGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGTTCTGTCAAAAGAGACTGCGGAACCAAAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACAAGCAATGCAAAACTGCTATCTCTCGTCGGANGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTACTGAGG--AGCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGAT-AAAAAAANC---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTNTATTTGTAATCAATATGAAAAAGTACAAATTTGCCTACGCATGATTTAACAGACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCGGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATC--------TGAAA-------AN-------------T------------A-AAA----AAA------------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
gi|1 : TGGACCTGAAAACTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTTGTGAATTCAAGAGTGTTTTGGATACATCGACTATTCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACAAATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTAGCCAATCCATCTGCTTTGTCTTACTTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TATATGAAAGTCCTCTGACGTCCAC--AGAATA-TTTTCGCAGTTAGGTTAATCTGAACA-TTGTCTGGAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTATCTTGTATTTGCCCAATAACCTTGAATGTGT-TGCTCATGATGCCAGATACCGATTGCTCTATCTAAAGAGACTGTGAAAC-AAAATTTGTCACCACTGTCAAAAAGCTTAAAGCATCACTAA-----GTTAACTTCCAATCACTGTTTTG--GAAGCATTATTTACTAGCAAGTCAAAACTGATGTCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGGAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGAAGTTTATATCATGTAAATGTAATAGATCAGCACTTTAAAGGTTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAGTGAGG--A--TTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGAGACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TATTGTAATGTATCAATTAACACCTTTATATTGTATTGACATATACTTTCTAATTATCTACATTTATTACATTGGGT
gi|1 : gtgtaaagTAGTGAGATGGATACATTTATTGCTCCATATCGACTAACAATTC---------TAATGGTCCGAATTTGCCCATACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAACTAGTATATACATTT-TATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGATATTA-TGGATCCATATCGGCTAAAATATCCGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCAAAAATGAG--TTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAAATCCGCCACTTACAAAGCTTTTATGTACAGGT------ACATT-----T-TATTT--G--TAATCAATC--------TGAAAT------AG-------------TGCAAATCGC---A-AAA----AAAAAAAGAAGT---CAGGAGTATAAGTGTAATTT-AATGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTTGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTGAAAGTTATAAAACAATTCTTTAGTACT-----GAAGGTCAAGC------AACATCTCTTGGTCATCTTACTAACAGATTATGAAGTGA----AACC-TTTTCTGCACAGAGGGTGCT-------ACA------TGCACTTATTTC--TTGGCTTCATAT-AAAATGCGCTCTTCGACTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagtgagatggatacatttattgctccatatcgactaacaattctaatggtccgaatttgcccatacccattccatgaaatataaaattctagattcgccacttatagaactagtatatacattttatttgttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagatattatggatccatatcggctaaaatatccgattttgtaataagtaaacaaaaaatggtccaaaaatgagtttgcccccacccattccatgaaatctaaaattttaaatccgccacttacaaagcttttatgtacaggtacattttatttgtaatcaatctgaaatagtgcaaatcgcaaaaaaaaaaagaagtcaggagtataagtgtaatttaatgctttattccattattcccaaaatcaccagttttgttatatatttcgatgtatttagccccaaaacttgaaagttataaaacaattctttagtactgaaggtcaagcaacatctcttggtcatcttactaacagattatgaagtgaaaccttttctgcacagagggtgctacatgcacttatttcttggcttcatataaaatgcgctcttcgacta
gi|10 : gtgtaaagtggacctgaaaactgcctgctaggaaagcagttttctccaggttgtgaattcaagagtgttttggatacatcgactattctatcaacaaaatgtagaatacctcaagtccgatactgaggaagcagacgtacaaatgatgctgaagttgagccccattcctactcatgatgtcgtagaaggctttagccaatccatctgctttgtcttacttgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatagctcttaatatatgaaagtcctctgacgtccacagaatattttcgcagttaggttaatctgaacattgtctggagggtgcttcagttcatatgagaagtgcgtctgtatcttgtatttgcccaataaccttgaatgtgttgctcatgatgccagataccgattgctctatctaaagagactgtgaaacaaaatttgtcaccactgtcaaaaagcttaaagcatcactaagttaacttccaatcactgttttggaagcattatttactagcaagtcaaaactgatgtctctcgtcggaagaggttggtatctaaagctggtactttggaaattcttctggtgctcaaggaacctgctcttagtgtattggtgaagtttatatcatgtaaatgtaatagatcagcactttaaaggtttggtttgtaccaatgtaaagcaaataatctagtttgtagtgaggattgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggtgaatcagagactgggtcagatgatgcttacatgcttctgctagtttatcatattgtaatgtatcaattaacacctttatattgtattgacatatactttctaattatctacatttattacattgggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTACCTGAAAATTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCGCCTATCCTATAAACATTATGT--------TGAAGTCTGATACTGAAGAAGCAGACGTACGTATGATGCTG---TTGAGTCCCATTCCTACTCATGATGTCGTTGAAGGCTTTGGCCAATCAATCT---------TACCTGCATTTCAATATATCACTGGATTCTTAAGTTCTTCAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATTAAAGTCCCCTGACGTCCACCAAGAAGAATTCTCGCAGTTAGGTTAATCTGAACATTTGTCTGAAGGGTGCTTCAGTTCATGTAAGAAGTGCGTCTGTACCTTGTATTTGTCCAATAACCTTGAAa
gi|11 : gtgtaaagGTGTTATTTCTAAA-TTTATTAAATGATTT-TCTAAAATCACCCGATTCGTAA-------TATATGCTAGTGCATTTTACCGCAGAACGAAAGAGATATATCACAATTCTTTAATACTTAATCTAAGGTCCTGC------AACAATCTTT-AGCATCCAACGAAC--AT-----AGTCA----AACA-TTGTCTCTACTGACGGAGCTACACAACACG------TGTACCTATATC--TAAGCTTCTTATAA
gi|12 : atttgcatcgactgatccatacctggcctgaaatgttggatctgtcctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacttaagagttcctCAATAGCCTTGAATTTGCATGTCGATGATGCCAGATACCGATTGTTTTGTTAAAAGAGACTGCGGAA-CAAAATATACCACCATTTTCAAAAAACTTTAAGCGTCACTTA-----G--A----------ACTGTTTTT--AAAGCGTTCTTTACAAGCAATACAAA------ATC---------------TTGGTATTTCAAAAATAATATTTTGAAA---ATGCTTCTGGTGCCCAAGGAACCTGCTTCAAGAGGATTGGTTGAGATTACATCATGTAAATG---------------TTGGTGGGTTGGTTTTGGCCAATAAAAAGCAAACACTCCAGTTTGTACTGAG----GCTTGTGTATGTATGACACGTg
gi|13 : T------ACATTGGGTAT-CATTTCTA--TAATCAATA--------TCAAATAGTGCAAA-------------TCGC---------A-AAA----AAAT-----------CAGGTGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTT-CC-AAAATCACCAGTTTCATTA-------TATATTTTGATGTATTTAGCCCCAAAACTTTAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCACTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGAACAGAGGGTGAT-------ACG------TGCACCTTTTTC--TAGGCTTCACATAAAAATGCGCTTTTCGAC
gi|14 : tCATATAAGAAGTTTGTCTGTGCCTTGTATGTTCCCAATAACTCTGAATGTAC-GTCTGGTGACACTAGAT-CTGATTATTGTATCAAAAGAGTTTGTGGAACGCAAATATGCCGCTAATGTCACACAGCTAAACGCATCACTTAAACGTGTTAA
gi|14 : TGGTATCTCGAAATTAATACC-CTGACGCCCAAAAATCATACTTCAAGTAGATTGATTGCGCTTACATCGCGTAAATATAACAGGTCAGCA-----------TAG-TTGTGCCAGTGTAAAACAAtctgacatcttcagtaaaaagaaaatggtatctcgaaattaataccctgacgcccaaaaatcatacttcaagtagattgattgcgcttacatcgcgtaaatataacaggtcagcatagttgtgccagtgtaaaacaa
gi|15 : catataagaagtttgtctgtgccttgtatgttcccaataactctgaatgtacgtctggtgacactagatctgattattgtatcaaaagagtttgtggaacgcaaatatgccgctaatgtcacacagctaaacgcatcacttaaacgtgttaatctgacatcttcagtaaaaagaaaaAAGTATAATTT-CAAAACATATTCAAAAACTT-TT-AAAATCACGAGTTCCAATA--------ATATTATAATATTTTCGGTCCCAAA-CTAGAAAGTTATACCA-AGTTCTTTACTTTT-----TAATGTTCT-CAAAAAAAAAACCGTTTTGGCATCGAACTAACACCTTTTATAGTCA----AAC
gi|16 : aatgtgttataaatccaagatagtgaaaagctatacaaattactaggcggccCTGAAAACTGCCTGCTGGGAAAGCATTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTGTCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTAT
gi|17 : tattgtaaagtgccgAATATGC-TGCTGATGACGCCAGATACCGATTGTTCTGTCAAAAGAGACTGCGGAA-CAAAATATGTCACCGATGTCAAAAAGCTTAAA
gi|18 : CTAACA---TAT-AAGTCAGTATAACC-TTTTCTGTACAGACGATGCT-------ACGTGAACTTGCATCTATTTTTGTAGACTTCTTATAAAAATACACTTTTCGAcggtaaccaaaatgctaat
gi|2 : TGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTACTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTTACCTATCAATAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGAAGACGTATATGTGATGCTGAACCTGAGCCCTATTTCTACTCATGATGTCGTAAAAGGCTTTGGCAAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAAGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCGCAGTTAGGTTAATTTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTTTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGTGGAACCAAACTATGTCACCATTGTCAAAAAGCTTAAAGCATTACTTA-----GTTAACTTCCAATCATGGTTTTG--GAAGCATTATTTACTAGCAATACAAGACTGATGTCTCTCGTCGGAAGAGGTTTGTATCT-ATAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTAAATGGTTGGTTTGTACCAGTGTAAAGCAAATAATCTAGTTTGTACTGAGGCAGGCTTGTATATGTGTGGCACGTGAAAAATATTTAA-GGGCATTACTCATGTAGGTGAATCAGAGACTGTGTCAGATGATGTTTACATGCTTCTGCTAGTTTATCA----TATTGCAATGTATCAATTAACACCTTTATATTGTATTTACATATACGTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGAT--AAAAAACC---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTGATGGTTTCATATTGACTAAAAATTC---------TAATGTTCCGAATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAGATTCGACACTTATAGAGCTAGTATATACATTTTTATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATT-ATGGATCCGTATCGACTAAAAAATCCAA-TTTTGTAATAAATAAA-AAAAAA-TGGTCCAAAAATGAGAATTTGCCCCCACCTATTCCATGAAATCTAAAATTTTAGATCCGCCATTTATACAGCTTTTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATC--------TGAAA-------AC-------------T------------------------------------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATAATTTACT-TAAATCACCAGTTTCGTTATACAATGTATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAATGTCT-------------TCCCTTCGGCATCTAACTAACAGATTATGAAGACA----AACC-TTTTCTGTAAAGAGGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAGAATGCGCCTTTCGACT
gi|3 : atTCACTTA-----GTTGACTTCCAATCACTGTTTTTTTGACGCATTATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGATGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATTT-AATGTAAAAGATCAGCACTTTTAATGGTTGATTTGTAACAATATAAAGCAAATAATCTAGTTTGCAC--AGA--TGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTAATTATCTAC--TTA-CACATTGGGTATTATTTCTGAT-AAAAAAAAC---TAAACATAGTCT
gi|3 : GATTCATATCGACTAAAATTTCAGAATTTTGTAATGGTCCGAATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATACATTTCTATTTATAAGCAATATGAAAAAGTACAGATTTGC------ATGAGTTAACAGACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCAACCAAATCCATGAAATCTAAAATTTTAGATCCGCCCCTTATAGAGCTATTATGTGCAAATCATGTGACATT-----T-CATTT--GC-TAA-CAATC--------TGAAAT------AG-------------TGCAAATCACAAAA-AAA----AAA------------CAGGAGTATAAGAGTAATTT-TAGGCTTTATTCCATTATTC-TC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACA-----GAAGGTCTTGC------AACATTCCTTGGGCATCTTACTCACAGATTATGAAGTTA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTATTTGACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactgattcatatcgactaaaatttcagaattttgtaatggtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaagtacagatttgcatgagttaacagactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgccccaaccaaatccatgaaatctaaaattttagatccgccccttatagagctattatgtgcaaatcatgtgacatttcatttgctaacaatctgaaatagtgcaaatcacaaaaaaaaaacaggagtataagagtaattttaggctttattccattattctcaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacattccttgggcatcttactcacagattatgaagttaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctatttgac
gi|4 : tcacttagttgacttccaatcactgtttttttgacgcattatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctgatgctcaaggaacctgctcttagtgtattggtggagtttacatcatttaatgtaaaagatcagcacttttaatggttgatttgtaacaatataaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttctaattatctacttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactACTTA-----GTTGACTTCCAATCACTGTTTTTT-GACGCAATATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTTGAGTTTACATCATTAAAATGTAAAAGATCAACACTTTTAATGGTTGATTTGTAACAATGTAAAGCAAATAATCTAGTTTGCAC--AGA--TGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTTATTATCT--TCTTA-CACATTGGGTATTATTTCTGAT-AAAAAAAAC---TAAACATAGTCT
gi|4 : AGTGAGATGGATACATTTACTGATTCATATCGACTAAAATTTCAGAATTTTGTAATAGTCCGAATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATACATTTCTATTTATAAGCAATATGAAAAGGTACAGATTTGC------ATGAGTTAACATACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCAAATCCATGAAATCTAAAATTTTAGATCCGGCTCTTATAGAGCTATTATGTACAAATCATGTGACATT-----T-TATTT--GCTTA--CAATC--------TGAAAT------AG-------------TGCAAATCACA--A-AAA----AAA------------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACA-----GAAGGTCTTGC------AACATCCCTTGGGCATCTATCTCACAGATTATGAAGTCA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTCTTTGACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagtgagatggatacatttactgattcatatcgactaaaatttcagaattttgtaatagtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaggtacagatttgcatgagttaacatactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgcccccaccaaatccatgaaatctaaaattttagatccggctcttatagagctattatgtacaaatcatgtgacattttatttgcttacaatctgaaatagtgcaaatcacaaaaaaaacaggagtataagtgtaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacatcccttgggcatctatctcacagattatgaagtcaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctctttgac
gi|5 : acttagttgacttccaatcactgttttttgacgcaatatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctggtgctcaaggaacctgctcttagtgtattggttgagtttacatcattaaaatgtaaaagatcaacacttttaatggttgatttgtaacaatgtaaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttcttattatcttcttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncTGCTCTTAGAATATTGGTGGAGTTTACATCATGTTAATGCAATAGATCAGCACATAAAACGGTTGATTTGTATCACTGTAAAGCAAATAATCTAGTTAGTACTGAGG----TTTGTATATGTATGGCACGTGAAAAATGTTTAAAGGGCATTACTCATGTAGATGAATTAGACACCTGGTAAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTGTATTAACATATACTTTCTAAGTATCTTCTTTTATTACATTGGGTATTATTTCTGAT-AAAAAAAACAACTAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACAAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTGGATTCGCCATTTATAGAGCTAGTATATACATTTTTATTTGTAATCAATATAAAAAAGTACAAATTTGCCTACGCATGATTTAACAAACTGATGTAAGATAAAAACATTAATGGATCCATATCGACTAAAAAATCAGA-CTTTGTAATAAGTAAACAAAAAAATATTCCGAAAATGAGAATTTGCCAACACCCATACCA-GAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTAAGTACAAGT------ACATT-----T-TATTT--G--TTATCAATC--------TGAAA-------AAGTGCAAATCGCAAC------------A-AAA----AAA------------CAAGAGTATAAGTGCAATTT-TAGGCTGTATTCCATTATTC-CC-AAAATCACCAGTTTCGATA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCATAATTCTTTAGGACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCATCTAGTTC--TAGGCTTCATATAAAAATGCACTCTTCGACT
gi|6 : TGTATTGGTGGAGTTTACATCATGTAAATGTAACAGATCAGCTCTTTAAAGGGTTGGTTTGTACCAATGTTAAGCAAGTAATCTAGTTTGTACTGAGG----CTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTTAATCAGACACTGGGTCAGTTGCTGTTCACATGCTTCTGCTAGTTTATCG----TATTGTAATGTACCAATTAACACCTTAATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAACC---TAAGCATTATCT
gi|6 : TAGTGAGATGGATACATTTATGGATCTATATCGACTAAAAATAC---------TAATGGTCCGAATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAAGTTCGCCACTTATAGAGCTAGTAGATACACTTTTATTAGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATTA-TGGATAGATATCGACTAAAAAATCCGA-TTTTGTAATGAGTAAACAAAAAA-TGGTCCAAAAATGAAAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCTGCCAATTATAGATCTTTTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATC--------TGAAAT------AG-------------T------------GCAAA----AAATCGCAAAAACATCAGGAGTATAAGTGAAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAGA--TATACCACATTTCTTTAGTACT-----GAAGGTCTTGC------AACATCCTTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCAACTATTTC--TAGGCTTCATATAAAAATGAGCTCTTCGACTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagtgagatggatacatttatggatctatatcgactaaaaatactaatggtccgaatttgcccctacccattccatgaaatataaaattctaagttcgccacttatagagctagtagatacacttttattagttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagacattatggatagatatcgactaaaaaatccgattttgtaatgagtaaacaaaaaatggtccaaaaatgaaaatttgcccccacccattccatgaaatctaaaattttagatctgccaattatagatcttttatgtacaagtacattttatttgtaatcaatctgaaatagtgcaaaaaatcgcaaaaacatcaggagtataagtgaaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccccaaaacttaagatataccacatttctttagtactgaaggtcttgcaacatcctttgggcatctaactaacagattatgaagtcaaaccttttctgtacagagggtgctacgtgcaactatttctaggcttcatataaaaatgagctcttcgacta
gi|7 : tgtattggtggagtttacatcatgtaaatgtaacagatcagctctttaaagggttggtttgtaccaatgttaagcaagtaatctagtttgtactgaggcttgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggttaatcagacactgggtcagttgctgttcacatgcttctgctagtttatcgtattgtaatgtaccaattaacaccttaatattgtatttacatatactttctaattatctacttttattacattgggtattatttctgataaaaaaaacctaagcattatctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCTACTATCCCATCAACAAAATGTAGAATACCTCAAGTCCAATACTGAGGAAGCAGACGTACATATGATGCTGAAGTTGAGTCCCATTTCTACTCATGATGTCGTAGAAGGATTTGGCCAATCTCTCTGTTCTCTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATGGCTCTTAATTCTATAAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCTCAGTAAGGTTAAACTGAATA-TTGTCTGAAGGGTGCTTCAGTTCATGTGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACACCAGATACGGATTGCTCTGTCAAAAGAGACTGCGGAA-CAAA--ATGTTATCATTGTCAAAAAGCTTAAAGCATCACTTA-----GTCAACTTCCAA-------CTTC--CAAACACTATTTACTAGCAATA----------------CGTCGTAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTATTTTACTGCTCAAGGAACCTGCTCTTAGTGTATTGGAGGAGTTTACATCATCTAAATGTAATAGATCAGCACTTTTAAGGGTTGGTTTGTACAAATGTAAAGCAAATAATCTAGTTTGTACTa
gi|7 : agtgtaaagCTTTTATTACATTGGGTATCATTTCT-AT-AAagacatttaagggcattactcatgtgggtgaatcagagactgggtcagatgatgcttacatgctttttcttttattacattgggtatcatttctataatcaatatcaa
gi|8 : agtgtaaagtggacctgaaaactgcctgctgggaaagcagttttctccaggttgtgggttcaagagtgttttggatacatctactatcccatcaacaaaatgtagaatacctcaagtccaatactgaggaagcagacgtacatatgatgctgaagttgagtcccatttctactcatgatgtcgtagaaggatttggccaatctctctgttctctcttacctgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatggctcttaattctataaaagtcctctgacgtccaccgagaagaattgtctcagtaaggttaaactgaatattgtctgaagggtgcttcagttcatgtgagaagtgcgtctgtaccttgtatttgcccaataaccttgaatgtgctgctgatgacaccagatacggattgctctgtcaaaagagactgcggaacaaaatgttatcattgtcaaaaagcttaaagcatcacttagtcaacttccaacttccaaacactatttactagcaatacgtcgtaagaggttggtatctaaagctggtactttgaaaattattttactgctcaaggaacctgctcttagtgtattggaggagtttacatcatctaaatgtaatagatcagcacttttaagggttggtttgtacaaatgtaaagcaaataatctagtttgtactagacatttaagggcattactcatgtgggtgaatcagagactgggtcagatgatgcttacatgctttttTACATGCTTCTTCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTTTATTTACAAATACTTTCTATTTATCTACATTTTTTACAATGGATATTAATTTTGAT-TAAtcaatatcaa
gi|8 : ATCAA-GGATCCATATCGACTAAACATTCAGAATGCTGTAATA-GTAAATAAAA-A-TGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATT-----TGTATTT--G--TAATCAATC--------GGAAA-------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatataatcaaggatccatatcgactaaacattcagaatgctgtaatagtaaataaaaatggtccgagaatgagaatttgccccaaccctttccatgatttctaaaattttagatccgccatttatagagctattttgtaacacttcatttgtatttgtaatcaatcggaaatagtgcaa
gi|9 : tacatgcttcttctagtttatcatactgtaatgtatcaataaacacctttatattttatttacaaatactttctatttatctacattttttacaatggatattaattttgattaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatataATCAA-GGATCCATATCGACTAAACATTCAGAATGCTGTAATA-GTAAATAAAA-A-TGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATT-----TGTATTT--G--TAATCAATCGGAAATAGTGCAA-------AC-------------C------------A-AAACATTAAA------------CAAGAGTATAAATGTTATTT-TAGACGTTATTCCATTATTC-TC-AAAATCACCAGATTCGTTA-------TACATTTCGATGT------------------AAAGTTATACTACAATTCTTAAGTACT-----GAAGTTCTTGC------AACATCCTTTGGGCATCTAATTAGCAGATTATGAAGTCA----AACC-TTTTCTATATAGACAGTGCT-------ACT------AGCACCTATTT---TAGGCTTCATATAGAAATGCGCTCTTCAACtagtgcaa
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 2 11111 111 2 111 11111111 111111 11111111111111 2222 111 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 333333333 1 222222 11111 4444444444444444444444444444444 1111111 11111 111111 1111111 111111
lowQualScore : 0 0 3 2 0 22 0 2 0 0 22 3 1 0 6 3 3 1 44444 3 777 1 0 3 6 3 3 6 000 2 2 2 88888888 888888 44444444444444 1 1111 1 1 3 3 1 8 444 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 888888888 1 6 1 66 0 3 0 3 5 0 0 555555 11111 8 55 99 777 1 6666666666666666666666666666666 4 4 4 4 3333333 1 5 00000 111111 7777 8 2 3333333 111111 55
lowQualScore : . . . . . .. . . . . .. . . . . . . . ..... . ... . . . . . . . ... . . . ........ ...... .............. . .... . . . . . . ... ..................................................................................................................................................... ......... . . . .. . . . . . . . ...... ..... . .. .. ... . ............................... . . . . ....... . . ..... ...... .... . . ....... ...... ..
lowQualScore : 6 8 2 5 2 88 2 5 0 2 88 2 0 0 7 3 2 0 33333 2 333 0 3 2 7 2 0 7 000 8 6 6 11111111 222222 44444444444444 4 2222 0 7 6 2 7 0 000 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 555555555 0 7 0 55 0 2 2 2 0 8 2 666666 11111 9 55 55 000 8 1111111111111111111111111111111 4 0 0 0 0000000 0 8 00000 555555 7777 0 5 0000000 555555 55
consensus : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGCGGAA-CAAAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACNAGCAATACAAAACTG-TATCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAC--------TGAG---GGCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTTTATTTGTNATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGACTGNTGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATCG---C---A-AAA----AA--A---------C-AGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
Reference ( family-3898 ) : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGCGGAACCAAAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACNAGCAATACAAAACTG-TATCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAC--------TGAG---GGCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTTTATTTGTNATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGACTGNTGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC----C---A-AAA----AA--A---------C-AGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
gi|1 : TGGACCTGAAAACTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTTGTGAATTCAAGAGTGTTTTGGATACATCGACTATTCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACAAATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTAGCCAATCCATCTGCTTTGTCTTACTTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TATATGAAAGTCCTCTGACGTCCAC--AGAAT-ATTTTCGCAGTTAGGTTAATCTGAACA-TTGTCTGGAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTATCTTGTATTTGCCCAATAACCTTGAATGTGT-TGCTCATGATGCCAGATACCGATTGCTCTATCTAAAGAGACTGTGAAA-CAAAATTTGTCACCACTGTCAAAAAGCTTAAAGCATCACTAA-----GTTAACTTCCAATCACTGTTTTG--GAAGCATTATTTACTAGCAAGTCAAAACTGATGTCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGGAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGAAGTTTATATCATGTAAATGTAATAGATCAGCACTTTAAAGGTTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAG--------TGAG---GA-TTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGAGACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TATTGTAATGTATCAATTAACACCTTTATATTGTATTGACATATACTTTCTAATTATCTACATTTATTACATTGGGT
gi|1 : gtgtaaagTAGTGAGATGGATACATTTATTGCTCCATATCGACTAACAATTC---------TAATGGTCCGAATTTGCCCATACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAACTAGTATATACATTTT-ATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGATATTA-TGGATCCATATCGGCTAAAATATCCGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCAAAAATGAG--TTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAAATCCGCCACTTACAAAGCTTTTATGTACAGGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATCG---C---A-AAA----AA--AAAAAGAAGTC-AGGAGTATAAGTGTAATTT-AATGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTTGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTGAAAGTTATAAAACAATTCTTTAGTACT-----GAAGGTCAAGC------AACATCTCTTGGTCATCTTACTAACAGATTATGAAGTGA----AACC-TTTTCTGCACAGAGGGTGCT-------ACA------TGCACTTATTTC--TTGGCTTCATAT-AAAATGCGCTCTTCGACTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagtgagatggatacatttattgctccatatcgactaacaattctaatggtccgaatttgcccatacccattccatgaaatataaaattctagattcgccacttatagaactagtatatacattttatttgttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagatattatggatccatatcggctaaaatatccgattttgtaataagtaaacaaaaaatggtccaaaaatgagtttgcccccacccattccatgaaatctaaaattttaaatccgccacttacaaagcttttatgtacaggtacattttatttgtaatcaatctgaaatagtgcaaatcgcaaaaaaaaaaagaagtcaggagtataagtgtaatttaatgctttattccattattcccaaaatcaccagttttgttatatatttcgatgtatttagccccaaaacttgaaagttataaaacaattctttagtactgaaggtcaagcaacatctcttggtcatcttactaacagattatgaagtgaaaccttttctgcacagagggtgctacatgcacttatttcttggcttcatataaaatgcgctcttcgacta
gi|10 : gtgtaaagtggacctgaaaactgcctgctaggaaagcagttttctccaggttgtgaattcaagagtgttttggatacatcgactattctatcaacaaaatgtagaatacctcaagtccgatactgaggaagcagacgtacaaatgatgctgaagttgagccccattcctactcatgatgtcgtagaaggctttagccaatccatctgctttgtcttacttgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatagctcttaatatatgaaagtcctctgacgtccacagaatattttcgcagttaggttaatctgaacattgtctggagggtgcttcagttcatatgagaagtgcgtctgtatcttgtatttgcccaataaccttgaatgtgttgctcatgatgccagataccgattgctctatctaaagagactgtgaaacaaaatttgtcaccactgtcaaaaagcttaaagcatcactaagttaacttccaatcactgttttggaagcattatttactagcaagtcaaaactgatgtctctcgtcggaagaggttggtatctaaagctggtactttggaaattcttctggtgctcaaggaacctgctcttagtgtattggtgaagtttatatcatgtaaatgtaatagatcagcactttaaaggtttggtttgtaccaatgtaaagcaaataatctagtttgtagtgaggattgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggtgaatcagagactgggtcagatgatgcttacatgcttctgctagtttatcatattgtaatgtatcaattaacacctttatattgtattgacatatactttctaattatctacatttattacattgggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTACCTGAAAATTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCGCCTATCCTATAAACATTATGT--------TGAAGTCTGATACTGAAGAAGCAGACGTACGTATGATGCTG---TTGAGTCCCATTCCTACTCATGATGTCGTTGAAGGCTTTGGCCAATCAATCT---------TACCTGCATTTCAATATATCACTGGATTCTTAAGTTCTTCAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATTAAAGTCCCCTGACGTCCACCAAGAAGAATTCTCGCAGTTAGGTTAATCTGAACATTTGTCTGAAGGGTGCTTCAGTTCATGTAAGAAGTGCGTCTGTACCTTGTATTTGTCCAATAACCTTGAAa
gi|11 : gtgtaaagGTGTTATTTCTAAA-TTTATTAAATGATTT-TCTAAAATCACCCGATTCGTAA-------TATATGCTAGTGCATTTTACCGCAGAACGAAAGAGATATATCACAATTCTTTAATACTTAATCTAAGGTCCTGC------AACAATCTTT-AGCATCCAACGAAC--AT-----AGTCA----AACA-TTGTCTCTACTGACGGAGCTACACAACACG------TGTACCTATATC--TAAGCTTCTTATAA
gi|12 : atttgcatcgactgatccatacctggcctgaaatgttggatctgtcctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacttaagagttcctCAATAGCCTTGAATTTGCATGTCGATGATGCCAGATACCGATTGTTTTGTTAAAAGAGACTGCGGAA-CAAAATATACCACCATTTTCAAAAAACTTTAAGCGTCACTTA-----G--A----------ACTGTTTTT--AAAGCGTTCTTTACAAGCAATACAAA------ATC---------------TTGGTATTTCAAAAATAATATTTTGAAA---ATGCTTCTGGTGCCCAAGGAACCTGCTTCAAGAGGATTGGTTGAGATTACATCATGTAAATG---------------TTGGTGGGTTGGTTTTGGCCAATAAAAAGCAAACACTCCAGTTTGTAC--------TGA----GGCTTGTGTATGTATGACACGTg
gi|13 : T------ACATTGGGTAT-CATTTCTA--TAATCAATATCAAATAGTGC---AAATCG---C---A-AAA----AA--AT--------C-AGGTGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTT-CC-AAAATCACCAGTTTCATTA-------TATATTTTGATGTATTTAGCCCCAAAACTTTAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCACTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGAACAGAGGGTGAT-------ACG------TGCACCTTTTTC--TAGGCTTCACATAAAAATGCGCTTTTCGAC
gi|14 : tCATATAAGAAGTTTGTCTGTGCCTTGTATGTTCCCAATAACTCTGAATGTAC-GTCTGGTGACACTAGAT-CTGATTATTGTATCAAAAGAGTTTGTGGAACGCAAATATGCCGCTAATGTCACACAGCTAAACGCATCACTTAAACGTGTTAA
gi|14 : TGGTATCTCGAAATTAATACC-CTGACGCCCAAAAATCATACTTCAAGTAGATTGATTGCGCTTACATCGCGTAAATATAACAGGTCAGCA-----------TAG-TTGTGCCAGTGTAAAACAAtctgacatcttcagtaaaaagaaaatggtatctcgaaattaataccctgacgcccaaaaatcatacttcaagtagattgattgcgcttacatcgcgtaaatataacaggtcagcatagttgtgccagtgtaaaacaa
gi|15 : catataagaagtttgtctgtgccttgtatgttcccaataactctgaatgtacgtctggtgacactagatctgattattgtatcaaaagagtttgtggaacgcaaatatgccgctaatgtcacacagctaaacgcatcacttaaacgtgttaatctgacatcttcagtaaaaagaaaaATGT--G--TTATAAATCCAAGATAGTGA---AAAGC----T---ATACA----AATTA---------CTAGGCGGCCAAGTATAATTT-CAAAACATATTCAAAAACTT-TT-AAAATCACGAGTTCCAATA--------ATATTATAATATTTTCGGTCCCAAA-CTAGAAAGTTATACCA-AGTTCTTTACTTTT-----TAATGTTCT-CAAAAAAAAAACCGTTTTGGCATCGAACTAACACCTTTTATAGTCA----AAC
gi|16 : aCTGAAAACTGCCTGCTGGGAAAGCATTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTGTCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTAT
gi|17 : tattgtaaagtgccgAATATGC-TGCTGATGACGCCAGATACCGATTGTTCTGTCAAAAGAGACTGCGGAA-CAAAATATGTCACCGATGTCAAAAAGCTTAAA
gi|18 : CTAACA---TAT-AAGTCAGTATAACC-TTTTCTGTACAGACGATGCT-------ACGTGAACTTGCATCTATTTTTGTAGACTTCTTATAAAAATACACTTTTCGAcggtaaccaaaatgctaat
gi|2 : TGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTACTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTTACCTATCAATAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGAAGACGTATATGTGATGCTGAACCTGAGCCCTATTTCTACTCATGATGTCGTAAAAGGCTTTGGCAAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAAGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCGCAGTTAGGTTAATTTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTTTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGTGGAACCAAACTATGTCACCATTGTCAAAAAGCTTAAAGCATTACTTA-----GTTAACTTCCAATCATGGTTTTG--GAAGCATTATTTACTAGCAATACAAGACTGATGTCTCTCGTCGGAAGAGGTTTGTATCT-ATAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTAAATGGTTGGTTTGTACCAGTGTAAAGCAAATAATCTAGTTTGTAC--------TGAGGCAGGCTTGTATATGTGTGGCACGTGAAAAATATTTAA-GGGCATTACTCATGTAGGTGAATCAGAGACTGTGTCAGATGATGTTTACATGCTTCTGCTAGTTTATCA----TATTGCAATGTATCAATTAACACCTTTATATTGTATTTACATATACGTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGAT-AAAAAAC-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTGATGGTTTCATATTGACTAAAAATTC---------TAATGTTCCGAATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAGATTCGACACTTATAGAGCTAGTATATACATTTTTATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATT-ATGGATCCGTATCGACTAAAAAATCCAA-TTTTGTAATAAATAAA-AAAAAA-TGGTCCAAAAATGAGAATTTGCCCCCACCTATTCCATGAAATCTAAAATTTTAGATCCGCCATTTATACAGCTTTTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAA-ACT-----------------------------------------C-AGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATAATTTACT-TAAATCACCAGTTTCGTTATACAATGTATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAATGTCT-------------TCCCTTCGGCATCTAACTAACAGATTATGAAGACA----AACC-TTTTCTGTAAAGAGGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAGAATGCGCCTTTCGACT
gi|3 : atTCACTTA-----GTTGACTTCCAATCACTGTTTTTTTGACGCATTATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGATGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATTT-AATGTAAAAGATCAGCACTTTTAATGGTTGATTTGTAACAATATAAAGCAAATAATCTAGTTTGCAC--------AGA----TGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTAATTATCTAC--TTA-CACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAACATAGTCT
gi|3 : GATTCATATCGACTAAAATTTCAGAATTTTGTAATGGTCCGAATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATACATTTCTATTTATAAGCAATATGAAAAAGTACAGATTTGC------ATGAGTTAACAGACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCAACCAAATCCATGAAATCTAAAATTTTAGATCCGCCCCTTATAGAGCTATTATGTGCAAATCATGTGACATT-----T-CATTT--GC-TAA-CAATCTGAAATAGTGC---AAATCA---CAAAA-AAA----AA--A---------C-AGGAGTATAAGAGTAATTT-TAGGCTTTATTCCATTATTC-TC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACA-----GAAGGTCTTGC------AACATTCCTTGGGCATCTTACTCACAGATTATGAAGTTA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTATTTGACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactgattcatatcgactaaaatttcagaattttgtaatggtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaagtacagatttgcatgagttaacagactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgccccaaccaaatccatgaaatctaaaattttagatccgccccttatagagctattatgtgcaaatcatgtgacatttcatttgctaacaatctgaaatagtgcaaatcacaaaaaaaaaacaggagtataagagtaattttaggctttattccattattctcaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacattccttgggcatcttactcacagattatgaagttaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctatttgac
gi|4 : tcacttagttgacttccaatcactgtttttttgacgcattatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctgatgctcaaggaacctgctcttagtgtattggtggagtttacatcatttaatgtaaaagatcagcacttttaatggttgatttgtaacaatataaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttctaattatctacttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactACTTA-----GTTGACTTCCAATCACTGTTTTTT-GACGCAATATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTTGAGTTTACATCATTAAAATGTAAAAGATCAACACTTTTAATGGTTGATTTGTAACAATGTAAAGCAAATAATCTAGTTTGCAC--------AGA----TGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTTATTATCT--TCTTA-CACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAACATAGTCT
gi|4 : AGTGAGATGGATACATTTACTGATTCATATCGACTAAAATTTCAGAATTTTGTAATAGTCCGAATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATACATTTCTATTTATAAGCAATATGAAAAGGTACAGATTTGC------ATGAGTTAACATACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCAAATCCATGAAATCTAAAATTTTAGATCCGGCTCTTATAGAGCTATTATGTACAAATCATGTGACATT-----T-TATTT--GCTTA--CAATCTGAAATAGTGC---AAATCA---CA--A-AAA----AA--A---------C-AGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACA-----GAAGGTCTTGC------AACATCCCTTGGGCATCTATCTCACAGATTATGAAGTCA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTCTTTGACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagtgagatggatacatttactgattcatatcgactaaaatttcagaattttgtaatagtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaggtacagatttgcatgagttaacatactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgcccccaccaaatccatgaaatctaaaattttagatccggctcttatagagctattatgtacaaatcatgtgacattttatttgcttacaatctgaaatagtgcaaatcacaaaaaaaacaggagtataagtgtaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacatcccttgggcatctatctcacagattatgaagtcaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctctttgac
gi|5 : acttagttgacttccaatcactgttttttgacgcaatatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctggtgctcaaggaacctgctcttagtgtattggttgagtttacatcattaaaatgtaaaagatcaacacttttaatggttgatttgtaacaatgtaaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttcttattatcttcttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncTGCTCTTAGAATATTGGTGGAGTTTACATCATGTTAATGCAATAGATCAGCACATAAAACGGTTGATTTGTATCACTGTAAAGCAAATAATCTAGTTAGTAC--------TGAG---G-TTTGTATATGTATGGCACGTGAAAAATGTTTAAAGGGCATTACTCATGTAGATGAATTAGACACCTGGTAAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTGTATTAACATATACTTTCTAAGTATCTTCTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-CAACTAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACAAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTGGATTCGCCATTTATAGAGCTAGTATATACATTTTTATTTGTAATCAATATAAAAAAGTACAAATTTGCCTACGCATGATTTAACAAACTGATGTAAGATAAAAACATTAATGGATCCATATCGACTAAAAAATCAGA-CTTTGTAATAAGTAAACAAAAAAATATTCCGAAAATGAGAATTTGCCAACACCCATACCA-GAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTAAGTACAAGT------ACATT-----T-TATTT--G--TTATCAATCTGAAAAAGTGC---AAATCGCAAC---A-AAA----AA--A---------C-AAGAGTATAAGTGCAATTT-TAGGCTGTATTCCATTATTC-CC-AAAATCACCAGTTTCGATA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCATAATTCTTTAGGACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCATCTAGTTC--TAGGCTTCATATAAAAATGCACTCTTCGACT
gi|6 : TGTATTGGTGGAGTTTACATCATGTAAATGTAACAGATCAGCTCTTTAAAGGGTTGGTTTGTACCAATGTTAAGCAAGTAATCTAGTTTGTAC--------TGAG---G-CTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTTAATCAGACACTGGGTCAGTTGCTGTTCACATGCTTCTGCTAGTTTATCG----TATTGTAATGTACCAATTAACACCTTAATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAACC---TAAGCATTATCT
gi|6 : TAGTGAGATGGATACATTTATGGATCTATATCGACTAAAAATAC---------TAATGGTCCGAATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAAGTTCGCCACTTATAGAGCTAGTAGATACACTTTTATTAGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATTA-TGGATAGATATCGACTAAAAAATCCGA-TTTTGTAATGAGTAAACAAAAAA-TGGTCCAAAAATGAAAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCTGCCAATTATAGATCTTTTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGCAAAAAATCG---C---A-AAA----AC--AT--------C-AGGAGTATAAGTGAAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAGA--TATACCACATTTCTTTAGTACT-----GAAGGTCTTGC------AACATCCTTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCAACTATTTC--TAGGCTTCATATAAAAATGAGCTCTTCGACTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagtgagatggatacatttatggatctatatcgactaaaaatactaatggtccgaatttgcccctacccattccatgaaatataaaattctaagttcgccacttatagagctagtagatacacttttattagttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagacattatggatagatatcgactaaaaaatccgattttgtaatgagtaaacaaaaaatggtccaaaaatgaaaatttgcccccacccattccatgaaatctaaaattttagatctgccaattatagatcttttatgtacaagtacattttatttgtaatcaatctgaaatagtgcaaaaaatcgcaaaaacatcaggagtataagtgaaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccccaaaacttaagatataccacatttctttagtactgaaggtcttgcaacatcctttgggcatctaactaacagattatgaagtcaaaccttttctgtacagagggtgctacgtgcaactatttctaggcttcatataaaaatgagctcttcgacta
gi|7 : tgtattggtggagtttacatcatgtaaatgtaacagatcagctctttaaagggttggtttgtaccaatgttaagcaagtaatctagtttgtactgaggcttgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggttaatcagacactgggtcagttgctgttcacatgcttctgctagtttatcgtattgtaatgtaccaattaacaccttaatattgtatttacatatactttctaattatctacttttattacattgggtattatttctgataaaaaaaacctaagcattatctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCTACTATCCCATCAACAAAATGTAGAATACCTCAAGTCCAATACTGAGGAAGCAGACGTACATATGATGCTGAAGTTGAGTCCCATTTCTACTCATGATGTCGTAGAAGGATTTGGCCAATCTCTCTGTTCTCTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATGGCTCTTAATTCTATAAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCTCAGTAAGGTTAAACTGAATA-TTGTCTGAAGGGTGCTTCAGTTCATGTGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACACCAGATACGGATTGCTCTGTCAAAAGAGACTGCGGAA-CAAA--ATGTTATCATTGTCAAAAAGCTTAAAGCATCACTTA-----GTCAACTTCCAA-------CTTC--CAAACACTATTTACTAGCAATA----------------CGTCGTAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTATTTTACTGCTCAAGGAACCTGCTCTTAGTGTATTGGAGGAGTTTACATCATCTAAATGTAATAGATCAGCACTTTTAAGGGTTGGTTTGTACAAATGTAAAGCAAATAATCTAGTTTGTACTAGACATTTAAG---GGCAT-TACTCATGTGG---GTGAA-------TCA-GAG----AC---------TGGGTCAGAT---------GATG---CTTACATGCTTTTTCT--TTTATTA----CATTG---GGTATCAa
gi|7 : agtgtaaagCTTTTATTACATTGGGTATCATTTCT-ATAAtttctataatcaatatcaa
gi|8 : agtgtaaagtggacctgaaaactgcctgctgggaaagcagttttctccaggttgtgggttcaagagtgttttggatacatctactatcccatcaacaaaatgtagaatacctcaagtccaatactgaggaagcagacgtacatatgatgctgaagttgagtcccatttctactcatgatgtcgtagaaggatttggccaatctctctgttctctcttacctgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatggctcttaattctataaaagtcctctgacgtccaccgagaagaattgtctcagtaaggttaaactgaatattgtctgaagggtgcttcagttcatgtgagaagtgcgtctgtaccttgtatttgcccaataaccttgaatgtgctgctgatgacaccagatacggattgctctgtcaaaagagactgcggaacaaaatgttatcattgtcaaaaagcttaaagcatcacttagtcaacttccaacttccaaacactatttactagcaatacgtcgtaagaggttggtatctaaagctggtactttgaaaattattttactgctcaaggaacctgctcttagtgtattggaggagtttacatcatctaaatgtaatagatcagcacttttaagggttggtttgtacaaatgtaaagcaaataatctagtttgtactagacatttaagggcattactcatgtgggtgaatcagagactgggtcagatgatgcttacatgctttttTACATGCTTCTTCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTTTATTTACAAATACTTTCTATTTATCTACATTTTTTACAATGGATATTAATTTTGATTAAtcaatatcaa
gi|8 : ATCAA-GGATCCATATCGACTAAACATTCAGAATGCTGTAATA-GTAAATAAAA-A-TGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATT-----TGTATTT--G--TAATCAATCGGAAATAGTGC---AAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatataatcaaggatccatatcgactaaacattcagaatgctgtaatagtaaataaaaatggtccgagaatgagaatttgccccaaccctttccatgatttctaaaattttagatccgccatttatagagctattttgtaacacttcatttgtatttgtaatcaatcggaaatagtgcaa
gi|9 : tacatgcttcttctagtttatcatactgtaatgtatcaataaacacctttatattttatttacaaatactttctatttatctacattttttacaatggatattaattttgattaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatataATCAA-GGATCCATATCGACTAAACATTCAGAATGCTGTAATA-GTAAATAAAA-A-TGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATT-----TGTATTT--G--TAATCAATCGGAAATAGTGC---AAA-C----C---A-AAACATTAA--A---------C-AAGAGTATAAATGTTATTT-TAGACGTTATTCCATTATTC-TC-AAAATCACCAGATTCGTTA-------TACATTTCGATGT------------------AAAGTTATACTACAATTCTTAAGTACT-----GAAGTTCTTGC------AACATCCTTTGGGCATCTAATTAGCAGATTATGAAGTCA----AACC-TTTTCTATATAGACAGTGCT-------ACT------AGCACCTATTT---TAGGCTTCATATAGAAATGCGCTCTTCAAC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 11111 111 2 111 11111111 111111 11111111111111 2222 111 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 333333333 1 222222 11111 11111111 222222222 1111111 11111 111111 1111111 111111
lowQualScore : 0 0 3 2 0 22 0 2 0 0 22 3 1 0 6 6 6 3 1 44444 3 777 1 0 3 6 3 3 6 000 2 2 2 88888888 888888 44444444444444 1 1111 1 1 3 3 1 8 444 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 888888888 1 6 1 66 0 3 0 3 5 0 0 555555 11111 8 55 99 777 33333333 777 9999 666666666 4 4 4 3333333 1 5 00000 111111 7777 8 2 3333333 111111 55
lowQualScore : . . . . . .. . . . . .. . . . . . . . . ..... . ... . . . . . . . ... . . . ........ ...... .............. . .... . . . . . . ... ..................................................................................................................................................... ......... . . . .. . . . . . . . ...... ..... . .. .. ... ........ ... .... ......... . . . ....... . . ..... ...... .... . . ....... ...... ..
lowQualScore : 6 8 2 5 2 88 2 5 0 2 88 2 0 0 7 7 7 2 0 33333 2 333 0 3 2 7 2 0 7 000 8 6 6 11111111 222222 44444444444444 4 2222 0 7 6 2 7 0 000 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 555555555 0 7 0 55 0 2 2 2 0 8 2 666666 11111 9 55 55 000 77777777 888 4444 777777777 0 0 0 0000000 0 8 00000 555555 7777 0 5 0000000 555555 55
consensus : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGCGGAA-CA-AAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACNAGCAATACAAAACTG-TATCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAC--------TGAG---GGCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTTTATTTGTNATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGACTGNTGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC---GC---AA---AA----AAA---------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
Reference ( family-3898 ) : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGCGGAA-CA-AAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACNAGCAATACAAAACTG-TATCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAC--------TGAG---GGCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTTTATTTGTNATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGACTGNTGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC---GC---AA---AA----AAA---------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
gi|1 : TGGACCTGAAAACTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTTGTGAATTCAAGAGTGTTTTGGATACATCGACTATTCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACAAATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTAGCCAATCCATCTGCTTTGTCTTACTTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TATATGAAAGTCCTCTGACGTCCAC--AGAAT-ATTTTCGCAGTTAGGTTAATCTGAACA-TTGTCTGGAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTATCTTGTATTTGCCCAATAACCTTGAATGTGT-TGCTCATGATGCCAGATACCGATTGCTCTATCTAAAGAGACTGTGAAA-CA-AAATTTGTCACCACTGTCAAAAAGCTTAAAGCATCACTAA-----GTTAACTTCCAATCACTGTTTTG--GAAGCATTATTTACTAGCAAGTCAAAACTGATGTCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGGAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGAAGTTTATATCATGTAAATGTAATAGATCAGCACTTTAAAGGTTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAG--------TGAG---GA-TTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGAGACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TATTGTAATGTATCAATTAACACCTTTATATTGTATTGACATATACTTTCTAATTATCTACATTTATTACATTGGGT
gi|1 : gtgtaaagTAGTGAGATGGATACATTTATTGCTCCATATCGACTAACAATTC---------TAATGGTCCGAATTTGCCCATACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAACTAGTATATACATTTT-ATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGATATTA-TGGATCCATATCGGCTAAAATATCCGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCAAAAATGAG--TTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAAATCCGCCACTTACAAAGCTTTTATGTACAGGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC---GC---AA---AA----AAAAAAAGAAGTCAGGAGTATAAGTGTAATTT-AATGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTTGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTGAAAGTTATAAAACAATTCTTTAGTACT-----GAAGGTCAAGC------AACATCTCTTGGTCATCTTACTAACAGATTATGAAGTGA----AACC-TTTTCTGCACAGAGGGTGCT-------ACA------TGCACTTATTTC--TTGGCTTCATAT-AAAATGCGCTCTTCGACTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagtgagatggatacatttattgctccatatcgactaacaattctaatggtccgaatttgcccatacccattccatgaaatataaaattctagattcgccacttatagaactagtatatacattttatttgttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagatattatggatccatatcggctaaaatatccgattttgtaataagtaaacaaaaaatggtccaaaaatgagtttgcccccacccattccatgaaatctaaaattttaaatccgccacttacaaagcttttatgtacaggtacattttatttgtaatcaatctgaaatagtgcaaatcgcaaaaaaaaaaagaagtcaggagtataagtgtaatttaatgctttattccattattcccaaaatcaccagttttgttatatatttcgatgtatttagccccaaaacttgaaagttataaaacaattctttagtactgaaggtcaagcaacatctcttggtcatcttactaacagattatgaagtgaaaccttttctgcacagagggtgctacatgcacttatttcttggcttcatataaaatgcgctcttcgacta
gi|10 : gtgtaaagtggacctgaaaactgcctgctaggaaagcagttttctccaggttgtgaattcaagagtgttttggatacatcgactattctatcaacaaaatgtagaatacctcaagtccgatactgaggaagcagacgtacaaatgatgctgaagttgagccccattcctactcatgatgtcgtagaaggctttagccaatccatctgctttgtcttacttgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatagctcttaatatatgaaagtcctctgacgtccacagaatattttcgcagttaggttaatctgaacattgtctggagggtgcttcagttcatatgagaagtgcgtctgtatcttgtatttgcccaataaccttgaatgtgttgctcatgatgccagataccgattgctctatctaaagagactgtgaaacaaaatttgtcaccactgtcaaaaagcttaaagcatcactaagttaacttccaatcactgttttggaagcattatttactagcaagtcaaaactgatgtctctcgtcggaagaggttggtatctaaagctggtactttggaaattcttctggtgctcaaggaacctgctcttagtgtattggtgaagtttatatcatgtaaatgtaatagatcagcactttaaaggtttggtttgtaccaatgtaaagcaaataatctagtttgtagtgaggattgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggtgaatcagagactgggtcagatgatgcttacatgcttctgctagtttatcatattgtaatgtatcaattaacacctttatattgtattgacatatactttctaattatctacatttattacattgggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTACCTGAAAATTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCGCCTATCCTATAAACATTATGT--------TGAAGTCTGATACTGAAGAAGCAGACGTACGTATGATGCTG---TTGAGTCCCATTCCTACTCATGATGTCGTTGAAGGCTTTGGCCAATCAATCT---------TACCTGCATTTCAATATATCACTGGATTCTTAAGTTCTTCAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATTAAAGTCCCCTGACGTCCACCAAGAAGAATTCTCGCAGTTAGGTTAATCTGAACATTTGTCTGAAGGGTGCTTCAGTTCATGTAAGAAGTGCGTCTGTACCTTGTATTTGTCCAATAACCTTGAAa
gi|11 : gtgtaaagGTGTTATTTCTAAA-TTTATTAAATGATTT-TCTAAAATCACCCGATTCGTAA-------TATATGCTAGTGCATTTTACCGCAGAACGAAAGAGATATATCACAATTCTTTAATACTTAATCTAAGGTCCTGC------AACAATCTTT-AGCATCCAACGAAC--AT-----AGTCA----AACA-TTGTCTCTACTGACGGAGCTACACAACACG------TGTACCTATATC--TAAGCTTCTTATAA
gi|12 : atttgcatcgactgatccatacctggcctgaaatgttggatctgtcctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacttaagagttcctCAATAGCCTTGAATTTGCATGTCGATGATGCCAGATACCGATTGTTTTGTTAAAAGAGACTGCGGAA-CA-AAATATACCACCATTTTCAAAAAACTTTAAGCGTCACTTA-----G--A----------ACTGTTTTT--AAAGCGTTCTTTACAAGCAATACAAA------ATC---------------TTGGTATTTCAAAAATAATATTTTGAAA---ATGCTTCTGGTGCCCAAGGAACCTGCTTCAAGAGGATTGGTTGAGATTACATCATGTAAATG---------------TTGGTGGGTTGGTTTTGGCCAATAAAAAGCAAACACTCCAGTTTGTAC--------TGA----GGCTTGTGTATGTATGACACGTg
gi|13 : T------ACATTGGGTAT-CATTTCTA--TAATCAATATCAAATAGTGC---AAATC---GC---AA---AA----AAAT--------CAGGTGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTT-CC-AAAATCACCAGTTTCATTA-------TATATTTTGATGTATTTAGCCCCAAAACTTTAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCACTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGAACAGAGGGTGAT-------ACG------TGCACCTTTTTC--TAGGCTTCACATAAAAATGCGCTTTTCGAC
gi|14 : tCATATAAGAAGTTTGTCTGTGCCTTGTATGTTCCCAATAACTCTGAATGTAC-GTCTGGTGACACTAGAT-CTGATTATTGTATCAAAAGAGTTTGTGGAA-CGCAAATATGCCGCTAATGTCACACAGCTAAACGCATCACTTAAACGTGTTAA
gi|14 : TGGTATCTCGAAATTAATACC-CTGACGCCCAAAAATCATACTTCAAGTAGATTGATTGCGCTTACATCGCGTAAATATAACAGGTCAGCA-----------TAG-TTGTGCCAGTGTAAAACAAtctgacatcttcagtaaaaagaaaatggtatctcgaaattaataccctgacgcccaaaaatcatacttcaagtagattgattgcgcttacatcgcgtaaatataacaggtcagcatagttgtgccagtgtaaaacaa
gi|15 : catataagaagtttgtctgtgccttgtatgttcccaataactctgaatgtacgtctggtgacactagatctgattattgtatcaaaagagtttgtggaacgcaaatatgccgctaatgtcacacagctaaacgcatcacttaaacgtgttaatctgacatcttcagtaaaaagaaaaATGT--G--TTATAAATCCAAGATAGTGA---AAAGCTATAC---AA---AT----TAC---------TAGGCGGCCAAGTATAATTT-CAAAACATATTCAAAAACTT-TT-AAAATCACGAGTTCCAATA--------ATATTATAATATTTTCGGTCCCAAA-CTAGAAAGTTATACCA-AGTTCTTTACTTTT-----TAATGTTCT-CAAAAAAAAAACCGTTTTGGCATCGAACTAACACCTTTTATAGTCA----AAC
gi|16 : aCTGAAAACTGCCTGCTGGGAAAGCATTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTGTCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTAT
gi|17 : tattgtaaagtgccgAATATGC-TGCTGATGACGCCAGATACCGATTGTTCTGTCAAAAGAGACTGCGGAA-CA-AAATATGTCACCGATGTCAAAAAGCTTAAA
gi|18 : CTAACA---TAT-AAGTCAGTATAACC-TTTTCTGTACAGACGATGCT-------ACGTGAACTTGCATCTATTTTTGTAGACTTCTTATAAAAATACACTTTTCGAcggtaaccaaaatgctaat
gi|2 : TGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTACTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTTACCTATCAATAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGAAGACGTATATGTGATGCTGAACCTGAGCCCTATTTCTACTCATGATGTCGTAAAAGGCTTTGGCAAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAAGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCGCAGTTAGGTTAATTTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTTTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGTGGAACCA-AACTATGTCACCATTGTCAAAAAGCTTAAAGCATTACTTA-----GTTAACTTCCAATCATGGTTTTG--GAAGCATTATTTACTAGCAATACAAGACTGATGTCTCTCGTCGGAAGAGGTTTGTATCT-ATAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTAAATGGTTGGTTTGTACCAGTGTAAAGCAAATAATCTAGTTTGTAC--------TGAGGCAGGCTTGTATATGTGTGGCACGTGAAAAATATTTAA-GGGCATTACTCATGTAGGTGAATCAGAGACTGTGTCAGATGATGTTTACATGCTTCTGCTAGTTTATCA----TATTGCAATGTATCAATTAACACCTTTATATTGTATTTACATATACGTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGAT-AAAAAAC-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTGATGGTTTCATATTGACTAAAAATTC---------TAATGTTCCGAATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAGATTCGACACTTATAGAGCTAGTATATACATTTTTATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATT-ATGGATCCGTATCGACTAAAAAATCCAA-TTTTGTAATAAATAAA-AAAAAA-TGGTCCAAAAATGAGAATTTGCCCCCACCTATTCCATGAAATCTAAAATTTTAGATCCGCCATTTATACAGCTTTTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAA-ACT-----------------------------------------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATAATTTACT-TAAATCACCAGTTTCGTTATACAATGTATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAATGTCT-------------TCCCTTCGGCATCTAACTAACAGATTATGAAGACA----AACC-TTTTCTGTAAAGAGGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAGAATGCGCCTTTCGACT
gi|3 : atTCACTTA-----GTTGACTTCCAATCACTGTTTTTTTGACGCATTATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGATGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATTT-AATGTAAAAGATCAGCACTTTTAATGGTTGATTTGTAACAATATAAAGCAAATAATCTAGTTTGCAC--------AGA----TGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTAATTATCTAC--TTA-CACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAACATAGTCT
gi|3 : GATTCATATCGACTAAAATTTCAGAATTTTGTAATGGTCCGAATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATACATTTCTATTTATAAGCAATATGAAAAAGTACAGATTTGC------ATGAGTTAACAGACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCAACCAAATCCATGAAATCTAAAATTTTAGATCCGCCCCTTATAGAGCTATTATGTGCAAATCATGTGACATT-----T-CATTT--GC-TAA-CAATCTGAAATAGTGC---AAATC---ACAAAAA---AA----AAA---------CAGGAGTATAAGAGTAATTT-TAGGCTTTATTCCATTATTC-TC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACA-----GAAGGTCTTGC------AACATTCCTTGGGCATCTTACTCACAGATTATGAAGTTA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTATTTGACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactgattcatatcgactaaaatttcagaattttgtaatggtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaagtacagatttgcatgagttaacagactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgccccaaccaaatccatgaaatctaaaattttagatccgccccttatagagctattatgtgcaaatcatgtgacatttcatttgctaacaatctgaaatagtgcaaatcacaaaaaaaaaacaggagtataagagtaattttaggctttattccattattctcaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacattccttgggcatcttactcacagattatgaagttaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctatttgac
gi|4 : tcacttagttgacttccaatcactgtttttttgacgcattatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctgatgctcaaggaacctgctcttagtgtattggtggagtttacatcatttaatgtaaaagatcagcacttttaatggttgatttgtaacaatataaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttctaattatctacttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactACTTA-----GTTGACTTCCAATCACTGTTTTTT-GACGCAATATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTTGAGTTTACATCATTAAAATGTAAAAGATCAACACTTTTAATGGTTGATTTGTAACAATGTAAAGCAAATAATCTAGTTTGCAC--------AGA----TGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTTATTATCT--TCTTA-CACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAACATAGTCT
gi|4 : AGTGAGATGGATACATTTACTGATTCATATCGACTAAAATTTCAGAATTTTGTAATAGTCCGAATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATACATTTCTATTTATAAGCAATATGAAAAGGTACAGATTTGC------ATGAGTTAACATACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCAAATCCATGAAATCTAAAATTTTAGATCCGGCTCTTATAGAGCTATTATGTACAAATCATGTGACATT-----T-TATTT--GCTTA--CAATCTGAAATAGTGC---AAATC---ACA--AA---AA----AAA---------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACA-----GAAGGTCTTGC------AACATCCCTTGGGCATCTATCTCACAGATTATGAAGTCA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTCTTTGACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagtgagatggatacatttactgattcatatcgactaaaatttcagaattttgtaatagtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaggtacagatttgcatgagttaacatactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgcccccaccaaatccatgaaatctaaaattttagatccggctcttatagagctattatgtacaaatcatgtgacattttatttgcttacaatctgaaatagtgcaaatcacaaaaaaaacaggagtataagtgtaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacatcccttgggcatctatctcacagattatgaagtcaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctctttgac
gi|5 : acttagttgacttccaatcactgttttttgacgcaatatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctggtgctcaaggaacctgctcttagtgtattggttgagtttacatcattaaaatgtaaaagatcaacacttttaatggttgatttgtaacaatgtaaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttcttattatcttcttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncTGCTCTTAGAATATTGGTGGAGTTTACATCATGTTAATGCAATAGATCAGCACATAAAACGGTTGATTTGTATCACTGTAAAGCAAATAATCTAGTTAGTAC--------TGAG---G-TTTGTATATGTATGGCACGTGAAAAATGTTTAAAGGGCATTACTCATGTAGATGAATTAGACACCTGGTAAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTGTATTAACATATACTTTCTAAGTATCTTCTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-CAACTAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACAAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTGGATTCGCCATTTATAGAGCTAGTATATACATTTTTATTTGTAATCAATATAAAAAAGTACAAATTTGCCTACGCATGATTTAACAAACTGATGTAAGATAAAAACATTAATGGATCCATATCGACTAAAAAATCAGA-CTTTGTAATAAGTAAACAAAAAAATATTCCGAAAATGAGAATTTGCCAACACCCATACCA-GAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTAAGTACAAGT------ACATT-----T-TATTT--G--TTATCAATCTGAAAAAGTGC---AAATC---GC---AACAAAA----AAA---------CAAGAGTATAAGTGCAATTT-TAGGCTGTATTCCATTATTC-CC-AAAATCACCAGTTTCGATA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCATAATTCTTTAGGACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCATCTAGTTC--TAGGCTTCATATAAAAATGCACTCTTCGACT
gi|6 : TGTATTGGTGGAGTTTACATCATGTAAATGTAACAGATCAGCTCTTTAAAGGGTTGGTTTGTACCAATGTTAAGCAAGTAATCTAGTTTGTAC--------TGAG---G-CTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTTAATCAGACACTGGGTCAGTTGCTGTTCACATGCTTCTGCTAGTTTATCG----TATTGTAATGTACCAATTAACACCTTAATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAACC---TAAGCATTATCT
gi|6 : TAGTGAGATGGATACATTTATGGATCTATATCGACTAAAAATAC---------TAATGGTCCGAATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAAGTTCGCCACTTATAGAGCTAGTAGATACACTTTTATTAGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATTA-TGGATAGATATCGACTAAAAAATCCGA-TTTTGTAATGAGTAAACAAAAAA-TGGTCCAAAAATGAAAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCTGCCAATTATAGATCTTTTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGCAAAAAATC---GC---AA---AA----ACAT--------CAGGAGTATAAGTGAAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAGA--TATACCACATTTCTTTAGTACT-----GAAGGTCTTGC------AACATCCTTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCAACTATTTC--TAGGCTTCATATAAAAATGAGCTCTTCGACTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagtgagatggatacatttatggatctatatcgactaaaaatactaatggtccgaatttgcccctacccattccatgaaatataaaattctaagttcgccacttatagagctagtagatacacttttattagttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagacattatggatagatatcgactaaaaaatccgattttgtaatgagtaaacaaaaaatggtccaaaaatgaaaatttgcccccacccattccatgaaatctaaaattttagatctgccaattatagatcttttatgtacaagtacattttatttgtaatcaatctgaaatagtgcaaaaaatcgcaaaaacatcaggagtataagtgaaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccccaaaacttaagatataccacatttctttagtactgaaggtcttgcaacatcctttgggcatctaactaacagattatgaagtcaaaccttttctgtacagagggtgctacgtgcaactatttctaggcttcatataaaaatgagctcttcgacta
gi|7 : tgtattggtggagtttacatcatgtaaatgtaacagatcagctctttaaagggttggtttgtaccaatgttaagcaagtaatctagtttgtactgaggcttgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggttaatcagacactgggtcagttgctgttcacatgcttctgctagtttatcgtattgtaatgtaccaattaacaccttaatattgtatttacatatactttctaattatctacttttattacattgggtattatttctgataaaaaaaacctaagcattatctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCTACTATCCCATCAACAAAATGTAGAATACCTCAAGTCCAATACTGAGGAAGCAGACGTACATATGATGCTGAAGTTGAGTCCCATTTCTACTCATGATGTCGTAGAAGGATTTGGCCAATCTCTCTGTTCTCTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATGGCTCTTAATTCTATAAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCTCAGTAAGGTTAAACTGAATA-TTGTCTGAAGGGTGCTTCAGTTCATGTGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACACCAGATACGGATTGCTCTGTCAAAAGAGACTGCGGAA-CA-AA--ATGTTATCATTGTCAAAAAGCTTAAAGCATCACTTA-----GTCAACTTCCAA-------CTTC--CAAACACTATTTACTAGCAATA----------------CGTCGTAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTATTTTACTGCTCAAGGAACCTGCTCTTAGTGTATTGGAGGAGTTTACATCATCTAAATGTAATAGATCAGCACTTTTAAGGGTTGGTTTGTACAAATGTAAAGCAAATAATCTAGTTTGTACTAGACATTTAAG---GGCAT-TACTCATGTGG---GTGAA-------TCA-GAG----AC---------TGGGTCAGAT---------GATG---CTTACATGCTTTTTCT--TTTATTA----CATTG---GGTATCAa
gi|7 : agtgtaaagCTTTTATTACATTGGGTATCATTTCT-ATAAtttctataatcaatatcaa
gi|8 : agtgtaaagtggacctgaaaactgcctgctgggaaagcagttttctccaggttgtgggttcaagagtgttttggatacatctactatcccatcaacaaaatgtagaatacctcaagtccaatactgaggaagcagacgtacatatgatgctgaagttgagtcccatttctactcatgatgtcgtagaaggatttggccaatctctctgttctctcttacctgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatggctcttaattctataaaagtcctctgacgtccaccgagaagaattgtctcagtaaggttaaactgaatattgtctgaagggtgcttcagttcatgtgagaagtgcgtctgtaccttgtatttgcccaataaccttgaatgtgctgctgatgacaccagatacggattgctctgtcaaaagagactgcggaacaaaatgttatcattgtcaaaaagcttaaagcatcacttagtcaacttccaacttccaaacactatttactagcaatacgtcgtaagaggttggtatctaaagctggtactttgaaaattattttactgctcaaggaacctgctcttagtgtattggaggagtttacatcatctaaatgtaatagatcagcacttttaagggttggtttgtacaaatgtaaagcaaataatctagtttgtactagacatttaagggcattactcatgtgggtgaatcagagactgggtcagatgatgcttacatgctttttTACATGCTTCTTCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTTTATTTACAAATACTTTCTATTTATCTACATTTTTTACAATGGATATTAATTTTGATTAAtcaatatcaa
gi|8 : ATCAA-GGATCCATATCGACTAAACATTCAGAATGCTGTAATA-GTAAATAAAA-A-TGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATT-----TGTATTT--G--TAATCAATCGGAAATAGTGC---AAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatataatcaaggatccatatcgactaaacattcagaatgctgtaatagtaaataaaaatggtccgagaatgagaatttgccccaaccctttccatgatttctaaaattttagatccgccatttatagagctattttgtaacacttcatttgtatttgtaatcaatcggaaatagtgcaa
gi|9 : tacatgcttcttctagtttatcatactgtaatgtatcaataaacacctttatattttatttacaaatactttctatttatctacattttttacaatggatattaattttgattaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatataATCAA-GGATCCATATCGACTAAACATTCAGAATGCTGTAATA-GTAAATAAAA-A-TGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATT-----TGTATTT--G--TAATCAATCGGAAATAGTGC---AAAC-----C---AA---AACATTAAA---------CAAGAGTATAAATGTTATTT-TAGACGTTATTCCATTATTC-TC-AAAATCACCAGATTCGTTA-------TACATTTCGATGT------------------AAAGTTATACTACAATTCTTAAGTACT-----GAAGTTCTTGC------AACATCCTTTGGGCATCTAATTAGCAGATTATGAAGTCA----AACC-TTTTCTATATAGACAGTGCT-------ACT------AGCACCTATTT---TAGGCTTCATATAGAAATGCGCTCTTCAAC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 11111 111 2 111 11111111 111111 11111111111111 2222 111 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 333333333 1 222222 11111 11111111 222222222 1111111 11111 111111 1111111 111111
lowQualScore : 0 0 3 2 0 22 0 2 0 0 22 3 1 0 6 6 6 3 1 44444 3 777 1 0 3 6 3 3 6 000 2 2 2 88888888 888888 44444444444444 1 1111 1 1 3 3 1 8 444 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 888888888 1 6 1 66 0 3 0 3 5 0 0 555555 11111 8 55 99 777 33333333 777 9999 666666666 4 4 4 3333333 1 5 00000 111111 7777 8 2 3333333 111111 55
lowQualScore : . . . . . .. . . . . .. . . . . . . . . ..... . ... . . . . . . . ... . . . ........ ...... .............. . .... . . . . . . ... ..................................................................................................................................................... ......... . . . .. . . . . . . . ...... ..... . .. .. ... ........ ... .... ......... . . . ....... . . ..... ...... .... . . ....... ...... ..
lowQualScore : 6 8 2 5 2 88 2 5 0 2 88 2 0 0 7 7 7 2 0 33333 2 333 0 3 2 7 2 0 7 000 8 6 6 11111111 222222 44444444444444 4 2222 0 7 6 2 7 0 000 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 555555555 0 7 0 55 0 2 2 2 0 8 2 666666 11111 9 55 55 000 77777777 888 4444 777777777 0 0 0 0000000 0 8 00000 555555 7777 0 5 0000000 555555 55
consensus : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGCGGAA-CA-AAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACNAGCAATACAAAACTG-TATCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAC--------TGAG---GGCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTTTATTTGTNATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGACTGNTGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC---GC---AA---AA----AAA---------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
Reference ( family-3898 ) : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGCGGAA-CA-AAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACNAGCAATACAAAACTG-TATCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAC--------TGAG---GGCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTTTATTTGTNATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGACTGNTGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC---GC---AA---AA----AAA---------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
gi|1 : TGGACCTGAAAACTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTTGTGAATTCAAGAGTGTTTTGGATACATCGACTATTCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACAAATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTAGCCAATCCATCTGCTTTGTCTTACTTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TATATGAAAGTCCTCTGACGTCCAC--AGAAT-ATTTTCGCAGTTAGGTTAATCTGAACA-TTGTCTGGAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTATCTTGTATTTGCCCAATAACCTTGAATGTGT-TGCTCATGATGCCAGATACCGATTGCTCTATCTAAAGAGACTGTGAAA-CA-AAATTTGTCACCACTGTCAAAAAGCTTAAAGCATCACTAA-----GTTAACTTCCAATCACTGTTTTG--GAAGCATTATTTACTAGCAAGTCAAAACTGATGTCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGGAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGAAGTTTATATCATGTAAATGTAATAGATCAGCACTTTAAAGGTTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAG--------TGAG---GA-TTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGAGACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TATTGTAATGTATCAATTAACACCTTTATATTGTATTGACATATACTTTCTAATTATCTACATTTATTACATTGGGT
gi|1 : gtgtaaagTAGTGAGATGGATACATTTATTGCTCCATATCGACTAACAATTC---------TAATGGTCCGAATTTGCCCATACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAACTAGTATATACATTTT-ATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGATATTA-TGGATCCATATCGGCTAAAATATCCGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCAAAAATGAG--TTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAAATCCGCCACTTACAAAGCTTTTATGTACAGGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC---GC---AA---AA----AAAAAAAGAAGTCAGGAGTATAAGTGTAATTT-AATGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTTGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTGAAAGTTATAAAACAATTCTTTAGTACT-----GAAGGTCAAGC------AACATCTCTTGGTCATCTTACTAACAGATTATGAAGTGA----AACC-TTTTCTGCACAGAGGGTGCT-------ACA------TGCACTTATTTC--TTGGCTTCATAT-AAAATGCGCTCTTCGACTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagtgagatggatacatttattgctccatatcgactaacaattctaatggtccgaatttgcccatacccattccatgaaatataaaattctagattcgccacttatagaactagtatatacattttatttgttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagatattatggatccatatcggctaaaatatccgattttgtaataagtaaacaaaaaatggtccaaaaatgagtttgcccccacccattccatgaaatctaaaattttaaatccgccacttacaaagcttttatgtacaggtacattttatttgtaatcaatctgaaatagtgcaaatcgcaaaaaaaaaaagaagtcaggagtataagtgtaatttaatgctttattccattattcccaaaatcaccagttttgttatatatttcgatgtatttagccccaaaacttgaaagttataaaacaattctttagtactgaaggtcaagcaacatctcttggtcatcttactaacagattatgaagtgaaaccttttctgcacagagggtgctacatgcacttatttcttggcttcatataaaatgcgctcttcgacta
gi|10 : gtgtaaagtggacctgaaaactgcctgctaggaaagcagttttctccaggttgtgaattcaagagtgttttggatacatcgactattctatcaacaaaatgtagaatacctcaagtccgatactgaggaagcagacgtacaaatgatgctgaagttgagccccattcctactcatgatgtcgtagaaggctttagccaatccatctgctttgtcttacttgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatagctcttaatatatgaaagtcctctgacgtccacagaatattttcgcagttaggttaatctgaacattgtctggagggtgcttcagttcatatgagaagtgcgtctgtatcttgtatttgcccaataaccttgaatgtgttgctcatgatgccagataccgattgctctatctaaagagactgtgaaacaaaatttgtcaccactgtcaaaaagcttaaagcatcactaagttaacttccaatcactgttttggaagcattatttactagcaagtcaaaactgatgtctctcgtcggaagaggttggtatctaaagctggtactttggaaattcttctggtgctcaaggaacctgctcttagtgtattggtgaagtttatatcatgtaaatgtaatagatcagcactttaaaggtttggtttgtaccaatgtaaagcaaataatctagtttgtagtgaggattgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggtgaatcagagactgggtcagatgatgcttacatgcttctgctagtttatcatattgtaatgtatcaattaacacctttatattgtattgacatatactttctaattatctacatttattacattgggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTACCTGAAAATTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCGCCTATCCTATAAACATTATGT--------TGAAGTCTGATACTGAAGAAGCAGACGTACGTATGATGCTG---TTGAGTCCCATTCCTACTCATGATGTCGTTGAAGGCTTTGGCCAATCAATCT---------TACCTGCATTTCAATATATCACTGGATTCTTAAGTTCTTCAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATTAAAGTCCCCTGACGTCCACCAAGAAGAATTCTCGCAGTTAGGTTAATCTGAACATTTGTCTGAAGGGTGCTTCAGTTCATGTAAGAAGTGCGTCTGTACCTTGTATTTGTCCAATAACCTTGAAa
gi|11 : gtgtaaagGTGTTATTTCTAAA-TTTATTAAATGATTT-TCTAAAATCACCCGATTCGTAA-------TATATGCTAGTGCATTTTACCGCAGAACGAAAGAGATATATCACAATTCTTTAATACTTAATCTAAGGTCCTGC------AACAATCTTT-AGCATCCAACGAAC--AT-----AGTCA----AACA-TTGTCTCTACTGACGGAGCTACACAACACG------TGTACCTATATC--TAAGCTTCTTATAA
gi|12 : atttgcatcgactgatccatacctggcctgaaatgttggatctgtcctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacttaagagttcctCAATAGCCTTGAATTTGCATGTCGATGATGCCAGATACCGATTGTTTTGTTAAAAGAGACTGCGGAA-CA-AAATATACCACCATTTTCAAAAAACTTTAAGCGTCACTTA-----G--A----------ACTGTTTTT--AAAGCGTTCTTTACAAGCAATACAAA------ATC---------------TTGGTATTTCAAAAATAATATTTTGAAA---ATGCTTCTGGTGCCCAAGGAACCTGCTTCAAGAGGATTGGTTGAGATTACATCATGTAAATG---------------TTGGTGGGTTGGTTTTGGCCAATAAAAAGCAAACACTCCAGTTTGTAC--------TGA----GGCTTGTGTATGTATGACACGTg
gi|13 : T------ACATTGGGTAT-CATTTCTA--TAATCAATATCAAATAGTGC---AAATC---GC---AA---AA----AAAT--------CAGGTGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTT-CC-AAAATCACCAGTTTCATTA-------TATATTTTGATGTATTTAGCCCCAAAACTTTAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCACTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGAACAGAGGGTGAT-------ACG------TGCACCTTTTTC--TAGGCTTCACATAAAAATGCGCTTTTCGAC
gi|14 : tCATATAAGAAGTTTGTCTGTGCCTTGTATGTTCCCAATAACTCTGAATGTAC-GTCTGGTGACACTAGAT-CTGATTATTGTATCAAAAGAGTTTGTGGAA-CGCAAATATGCCGCTAATGTCACACAGCTAAACGCATCACTTAAACGTGTTAA
gi|14 : TGGTATCTCGAAATTAATACC-CTGACGCCCAAAAATCATACTTCAAGTAGATTGATTGCGCTTACATCGCGTAAATATAACAGGTCAGCA-----------TAG-TTGTGCCAGTGTAAAACAAtctgacatcttcagtaaaaagaaaatggtatctcgaaattaataccctgacgcccaaaaatcatacttcaagtagattgattgcgcttacatcgcgtaaatataacaggtcagcatagttgtgccagtgtaaaacaa
gi|15 : catataagaagtttgtctgtgccttgtatgttcccaataactctgaatgtacgtctggtgacactagatctgattattgtatcaaaagagtttgtggaacgcaaatatgccgctaatgtcacacagctaaacgcatcacttaaacgtgttaatctgacatcttcagtaaaaagaaaaATGT--G--TTATAAATCCAAGATAGTGA---AAAGCTATAC---AA---AT----TAC---------TAGGCGGCCAAGTATAATTT-CAAAACATATTCAAAAACTT-TT-AAAATCACGAGTTCCAATA--------ATATTATAATATTTTCGGTCCCAAA-CTAGAAAGTTATACCA-AGTTCTTTACTTTT-----TAATGTTCT-CAAAAAAAAAACCGTTTTGGCATCGAACTAACACCTTTTATAGTCA----AAC
gi|16 : aCTGAAAACTGCCTGCTGGGAAAGCATTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTGTCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTAT
gi|17 : tattgtaaagtgccgAATATGC-TGCTGATGACGCCAGATACCGATTGTTCTGTCAAAAGAGACTGCGGAA-CA-AAATATGTCACCGATGTCAAAAAGCTTAAA
gi|18 : CTAACA---TAT-AAGTCAGTATAACC-TTTTCTGTACAGACGATGCT-------ACGTGAACTTGCATCTATTTTTGTAGACTTCTTATAAAAATACACTTTTCGAcggtaaccaaaatgctaat
gi|2 : TGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTACTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTTACCTATCAATAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGAAGACGTATATGTGATGCTGAACCTGAGCCCTATTTCTACTCATGATGTCGTAAAAGGCTTTGGCAAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAAGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCGCAGTTAGGTTAATTTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTTTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGTGGAACCA-AACTATGTCACCATTGTCAAAAAGCTTAAAGCATTACTTA-----GTTAACTTCCAATCATGGTTTTG--GAAGCATTATTTACTAGCAATACAAGACTGATGTCTCTCGTCGGAAGAGGTTTGTATCT-ATAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTAAATGGTTGGTTTGTACCAGTGTAAAGCAAATAATCTAGTTTGTAC--------TGAGGCAGGCTTGTATATGTGTGGCACGTGAAAAATATTTAA-GGGCATTACTCATGTAGGTGAATCAGAGACTGTGTCAGATGATGTTTACATGCTTCTGCTAGTTTATCA----TATTGCAATGTATCAATTAACACCTTTATATTGTATTTACATATACGTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGAT-AAAAAAC-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTGATGGTTTCATATTGACTAAAAATTC---------TAATGTTCCGAATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAGATTCGACACTTATAGAGCTAGTATATACATTTTTATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATT-ATGGATCCGTATCGACTAAAAAATCCAA-TTTTGTAATAAATAAA-AAAAAA-TGGTCCAAAAATGAGAATTTGCCCCCACCTATTCCATGAAATCTAAAATTTTAGATCCGCCATTTATACAGCTTTTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAA-ACT-----------------------------------------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATAATTTACT-TAAATCACCAGTTTCGTTATACAATGTATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAATGTCT-------------TCCCTTCGGCATCTAACTAACAGATTATGAAGACA----AACC-TTTTCTGTAAAGAGGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAGAATGCGCCTTTCGACT
gi|3 : atTCACTTA-----GTTGACTTCCAATCACTGTTTTTTTGACGCATTATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGATGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATTT-AATGTAAAAGATCAGCACTTTTAATGGTTGATTTGTAACAATATAAAGCAAATAATCTAGTTTGCAC--------AGA----TGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTAATTATCTAC--TTA-CACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAACATAGTCT
gi|3 : GATTCATATCGACTAAAATTTCAGAATTTTGTAATGGTCCGAATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATACATTTCTATTTATAAGCAATATGAAAAAGTACAGATTTGC------ATGAGTTAACAGACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCAACCAAATCCATGAAATCTAAAATTTTAGATCCGCCCCTTATAGAGCTATTATGTGCAAATCATGTGACATT-----T-CATTT--GC-TAA-CAATCTGAAATAGTGC---AAATC---ACAAAAA---AA----AAA---------CAGGAGTATAAGAGTAATTT-TAGGCTTTATTCCATTATTC-TC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACA-----GAAGGTCTTGC------AACATTCCTTGGGCATCTTACTCACAGATTATGAAGTTA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTATTTGACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactgattcatatcgactaaaatttcagaattttgtaatggtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaagtacagatttgcatgagttaacagactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgccccaaccaaatccatgaaatctaaaattttagatccgccccttatagagctattatgtgcaaatcatgtgacatttcatttgctaacaatctgaaatagtgcaaatcacaaaaaaaaaacaggagtataagagtaattttaggctttattccattattctcaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacattccttgggcatcttactcacagattatgaagttaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctatttgac
gi|4 : tcacttagttgacttccaatcactgtttttttgacgcattatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctgatgctcaaggaacctgctcttagtgtattggtggagtttacatcatttaatgtaaaagatcagcacttttaatggttgatttgtaacaatataaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttctaattatctacttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactACTTA-----GTTGACTTCCAATCACTGTTTTTT-GACGCAATATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTTGAGTTTACATCATTAAAATGTAAAAGATCAACACTTTTAATGGTTGATTTGTAACAATGTAAAGCAAATAATCTAGTTTGCAC--------AGA----TGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTTATTATCT--TCTTA-CACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAACATAGTCT
gi|4 : AGTGAGATGGATACATTTACTGATTCATATCGACTAAAATTTCAGAATTTTGTAATAGTCCGAATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATACATTTCTATTTATAAGCAATATGAAAAGGTACAGATTTGC------ATGAGTTAACATACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCAAATCCATGAAATCTAAAATTTTAGATCCGGCTCTTATAGAGCTATTATGTACAAATCATGTGACATT-----T-TATTT--GCTTA--CAATCTGAAATAGTGC---AAATC---ACA--AA---AA----AAA---------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACA-----GAAGGTCTTGC------AACATCCCTTGGGCATCTATCTCACAGATTATGAAGTCA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTCTTTGACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagtgagatggatacatttactgattcatatcgactaaaatttcagaattttgtaatagtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaggtacagatttgcatgagttaacatactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgcccccaccaaatccatgaaatctaaaattttagatccggctcttatagagctattatgtacaaatcatgtgacattttatttgcttacaatctgaaatagtgcaaatcacaaaaaaaacaggagtataagtgtaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacatcccttgggcatctatctcacagattatgaagtcaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctctttgac
gi|5 : acttagttgacttccaatcactgttttttgacgcaatatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctggtgctcaaggaacctgctcttagtgtattggttgagtttacatcattaaaatgtaaaagatcaacacttttaatggttgatttgtaacaatgtaaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttcttattatcttcttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncTGCTCTTAGAATATTGGTGGAGTTTACATCATGTTAATGCAATAGATCAGCACATAAAACGGTTGATTTGTATCACTGTAAAGCAAATAATCTAGTTAGTAC--------TGAG---G-TTTGTATATGTATGGCACGTGAAAAATGTTTAAAGGGCATTACTCATGTAGATGAATTAGACACCTGGTAAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTGTATTAACATATACTTTCTAAGTATCTTCTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-CAACTAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACAAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTGGATTCGCCATTTATAGAGCTAGTATATACATTTTTATTTGTAATCAATATAAAAAAGTACAAATTTGCCTACGCATGATTTAACAAACTGATGTAAGATAAAAACATTAATGGATCCATATCGACTAAAAAATCAGA-CTTTGTAATAAGTAAACAAAAAAATATTCCGAAAATGAGAATTTGCCAACACCCATACCA-GAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTAAGTACAAGT------ACATT-----T-TATTT--G--TTATCAATCTGAAAAAGTGC---AAATC---GC---AACAAAA----AAA---------CAAGAGTATAAGTGCAATTT-TAGGCTGTATTCCATTATTC-CC-AAAATCACCAGTTTCGATA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCATAATTCTTTAGGACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCATCTAGTTC--TAGGCTTCATATAAAAATGCACTCTTCGACT
gi|6 : TGTATTGGTGGAGTTTACATCATGTAAATGTAACAGATCAGCTCTTTAAAGGGTTGGTTTGTACCAATGTTAAGCAAGTAATCTAGTTTGTAC--------TGAG---G-CTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTTAATCAGACACTGGGTCAGTTGCTGTTCACATGCTTCTGCTAGTTTATCG----TATTGTAATGTACCAATTAACACCTTAATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAACC---TAAGCATTATCT
gi|6 : TAGTGAGATGGATACATTTATGGATCTATATCGACTAAAAATAC---------TAATGGTCCGAATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAAGTTCGCCACTTATAGAGCTAGTAGATACACTTTTATTAGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATTA-TGGATAGATATCGACTAAAAAATCCGA-TTTTGTAATGAGTAAACAAAAAA-TGGTCCAAAAATGAAAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCTGCCAATTATAGATCTTTTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGCAAAAAATC---GC---AA---AA----ACAT--------CAGGAGTATAAGTGAAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAGA--TATACCACATTTCTTTAGTACT-----GAAGGTCTTGC------AACATCCTTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCAACTATTTC--TAGGCTTCATATAAAAATGAGCTCTTCGACTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagtgagatggatacatttatggatctatatcgactaaaaatactaatggtccgaatttgcccctacccattccatgaaatataaaattctaagttcgccacttatagagctagtagatacacttttattagttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagacattatggatagatatcgactaaaaaatccgattttgtaatgagtaaacaaaaaatggtccaaaaatgaaaatttgcccccacccattccatgaaatctaaaattttagatctgccaattatagatcttttatgtacaagtacattttatttgtaatcaatctgaaatagtgcaaaaaatcgcaaaaacatcaggagtataagtgaaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccccaaaacttaagatataccacatttctttagtactgaaggtcttgcaacatcctttgggcatctaactaacagattatgaagtcaaaccttttctgtacagagggtgctacgtgcaactatttctaggcttcatataaaaatgagctcttcgacta
gi|7 : tgtattggtggagtttacatcatgtaaatgtaacagatcagctctttaaagggttggtttgtaccaatgttaagcaagtaatctagtttgtactgaggcttgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggttaatcagacactgggtcagttgctgttcacatgcttctgctagtttatcgtattgtaatgtaccaattaacaccttaatattgtatttacatatactttctaattatctacttttattacattgggtattatttctgataaaaaaaacctaagcattatctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCTACTATCCCATCAACAAAATGTAGAATACCTCAAGTCCAATACTGAGGAAGCAGACGTACATATGATGCTGAAGTTGAGTCCCATTTCTACTCATGATGTCGTAGAAGGATTTGGCCAATCTCTCTGTTCTCTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATGGCTCTTAATTCTATAAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCTCAGTAAGGTTAAACTGAATA-TTGTCTGAAGGGTGCTTCAGTTCATGTGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACACCAGATACGGATTGCTCTGTCAAAAGAGACTGCGGAA-CA-AA--ATGTTATCATTGTCAAAAAGCTTAAAGCATCACTTA-----GTCAACTTCCAA-------CTTC--CAAACACTATTTACTAGCAATA----------------CGTCGTAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTATTTTACTGCTCAAGGAACCTGCTCTTAGTGTATTGGAGGAGTTTACATCATCTAAATGTAATAGATCAGCACTTTTAAGGGTTGGTTTGTACAAATGTAAAGCAAATAATCTAGTTTGTACTAGACATTTAAG---GGCAT-TACTCATGTGG---GTGAA-------TCA-GAG----AC---------TGGGTCAGAT---------GATG---CTTACATGCTTTTTCT--TTTATTA----CATTG---GGTATCAa
gi|7 : agtgtaaagCTTTTATTACATTGGGTATCATTTCT-ATAAtttctataatcaatatcaa
gi|8 : agtgtaaagtggacctgaaaactgcctgctgggaaagcagttttctccaggttgtgggttcaagagtgttttggatacatctactatcccatcaacaaaatgtagaatacctcaagtccaatactgaggaagcagacgtacatatgatgctgaagttgagtcccatttctactcatgatgtcgtagaaggatttggccaatctctctgttctctcttacctgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatggctcttaattctataaaagtcctctgacgtccaccgagaagaattgtctcagtaaggttaaactgaatattgtctgaagggtgcttcagttcatgtgagaagtgcgtctgtaccttgtatttgcccaataaccttgaatgtgctgctgatgacaccagatacggattgctctgtcaaaagagactgcggaacaaaatgttatcattgtcaaaaagcttaaagcatcacttagtcaacttccaacttccaaacactatttactagcaatacgtcgtaagaggttggtatctaaagctggtactttgaaaattattttactgctcaaggaacctgctcttagtgtattggaggagtttacatcatctaaatgtaatagatcagcacttttaagggttggtttgtacaaatgtaaagcaaataatctagtttgtactagacatttaagggcattactcatgtgggtgaatcagagactgggtcagatgatgcttacatgctttttTACATGCTTCTTCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTTTATTTACAAATACTTTCTATTTATCTACATTTTTTACAATGGATATTAATTTTGATTAAtcaatatcaa
gi|8 : ATCAA-GGATCCATATCGACTAAACATTCAGAATGCTGTAATA-GTAAATAAAA-A-TGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATT-----TGTATTT--G--TAATCAATCGGAAATAGTGC---AAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatataatcaaggatccatatcgactaaacattcagaatgctgtaatagtaaataaaaatggtccgagaatgagaatttgccccaaccctttccatgatttctaaaattttagatccgccatttatagagctattttgtaacacttcatttgtatttgtaatcaatcggaaatagtgcaa
gi|9 : tacatgcttcttctagtttatcatactgtaatgtatcaataaacacctttatattttatttacaaatactttctatttatctacattttttacaatggatattaattttgattaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatataATCAA-GGATCCATATCGACTAAACATTCAGAATGCTGTAATA-GTAAATAAAA-A-TGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATT-----TGTATTT--G--TAATCAATCGGAAATAGTGC---AAAC-----C---AA---AACATTAAA---------CAAGAGTATAAATGTTATTT-TAGACGTTATTCCATTATTC-TC-AAAATCACCAGATTCGTTA-------TACATTTCGATGT------------------AAAGTTATACTACAATTCTTAAGTACT-----GAAGTTCTTGC------AACATCCTTTGGGCATCTAATTAGCAGATTATGAAGTCA----AACC-TTTTCTATATAGACAGTGCT-------ACT------AGCACCTATTT---TAGGCTTCATATAGAAATGCGCTCTTCAAC
blockSeqs : A C GC G T CA A C T A C C A T AACGT T TTT A A A T A C TTA C G G TAGACATT GGCAGG AAAGGGCATTACTC A TAAT T A T T A C AAC NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN AGAATTTTG T C T AT A A A A CATGTG GGGTA G CT CT AAA TATAC CAA CATT T C A T TACAATG G A TAATC AAAAAA GTAT A C ACACAAC TGAACT TG
blockSeqs : A G GT C . CG A G . . . . A A . T TT T A C T C . . T A T . GGG AAGGGCATTACTC A TAAT A A T T A . . AGAATTTTG A C A AT A A A . CATGTG . G . C . ACAAA . . T . . . . T T . . . A G . . .
blockSeqs : . . . . . CG A G . . . . A A . T T A A C T C . . A T T . GG AAGGGCATTACTC A . A T T T A . . AGAATTTTG A C A AT . A A . . . . . . . ACA . . . . . . . T T . . . . C . . .
blockSeqs : . . . C T . . G A . . . A . . A T T . TG CAGAGAC A . A A T T A . . . A . A AT . A A . . . . . . . GC . . . . . . . T T . . . . G . . .
blockSeqs : . . . . T . . C T . . . . . . T A C . TG . C . T A T T A . T . T T . A A . . . . . . . GC . . . . . . . A T . . . . C . . .
blockSeqs : . . C A G . GG . . . A . A . T A . . . . . . . . . . GC . . . . . . . A T . . . . C . . .
blockSeqs : T T G . GG . . . A . . . . . . . . . . C . . . . . . . T . . . . . G . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . . . . G . . .
blockSeqs : . . . . . . . . . . . . . C . . .
blockSeqs : .
blockSeqCons : GG**** AAGGGCATTACTC* AGAATTTTG AT *********
originalCons : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGCGGAA-CA-AAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACNAGCAATACAAAACTG-TATCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAC--------TGAG---GGCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTTTATTTGTNATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGACTGNTGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC---GC---AA---AA----AAA---------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
finalCons : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGCGGAA-CA-AAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACNAGCAATACAAAACTG-TATCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAC--------TGAGG----CTTGTATATGTGTGGCACGTGAAAAATGTTTAAGGGCATTACTC-ATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTTTATTTGTNATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGACTGNTGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC---GC---AA---AA----AAA---------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 11111 111 2 111 1111 111 2222 111 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 333333333 1 222222 11111 11111111 222222222 1111111 11111 111111 1111111 111111
lowQualScore : 0 0 3 2 0 22 0 2 0 0 22 3 1 0 6 6 6 3 1 44444 3 777 1 0 3 6 3 3 6 000 2 2 2 0000 000 4 0 1111 1 1 3 3 1 8 444 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 888888888 1 6 1 66 0 3 0 3 5 0 0 555555 11111 8 55 99 777 33333333 777 9999 666666666 4 4 4 3333333 1 5 00000 111111 7777 8 2 3333333 111111 55
lowQualScore : . . . . . .. . . . . .. . . . . . . . . ..... . ... . . . . . . . ... . . . .... ... . . .... . . . . . . ... ..................................................................................................................................................... ......... . . . .. . . . . . . . ...... ..... . .. .. ... ........ ... .... ......... . . . ....... . . ..... ...... .... . . ....... ...... ..
lowQualScore : 6 8 2 5 2 88 2 5 0 2 88 2 0 0 7 7 7 2 0 33333 2 333 0 3 2 7 2 0 7 000 8 6 6 6666 777 3 7 2222 0 7 6 2 7 0 000 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 555555555 0 7 0 55 0 2 2 2 0 8 2 666666 11111 9 55 55 000 77777777 888 4444 777777777 0 0 0 0000000 0 8 00000 555555 7777 0 5 0000000 555555 55
consensus : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGCGGAA-CA-AAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACNAGCAATACAAAACTG-TATCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTACTG----AGGCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTTTATTTGTNATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGACTGNTGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC---GC---AA---AA----AAA---------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
Reference ( family-3898 ) : NNTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTGGCCAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTNTCGCAGTTAGGTTAATCTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGCGGAA-CA-AAATATGTCACCANTGTCAAAAAGCTTAAAGCATCACTTA-----GTTAACTTCCAATCACTGTTTTT--GAAGCATTATTTACNAGCAATACAAAACTG-TATCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTNAANGGTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTACTG----AGGCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATNAACACCTTTATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACTAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAGCTAGTATATACATTTTTATTTGTNATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGACTGNTGTAAGATAAAGACATTAATGGATCCATATCGACTAAAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC---GC---AA---AA----AAA---------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAAAATGCGCTCTTCGACT
gi|1 : TGGACCTGAAAACTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTTGTGAATTCAAGAGTGTTTTGGATACATCGACTATTCTATCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACAAATGATGCTGAAGTTGAGCCCCATTCCTACTCATGATGTCGTAGAAGGCTTTAGCCAATCCATCTGCTTTGTCTTACTTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TATATGAAAGTCCTCTGACGTCCAC--AGAATA-TTTTCGCAGTTAGGTTAATCTGAACA-TTGTCTGGAGGGTGCTTCAGTTCATATGAGAAGTGCGTCTGTATCTTGTATTTGCCCAATAACCTTGAATGTGT-TGCTCATGATGCCAGATACCGATTGCTCTATCTAAAGAGACTGTGAAA-CA-AAATTTGTCACCACTGTCAAAAAGCTTAAAGCATCACTAA-----GTTAACTTCCAATCACTGTTTTG--GAAGCATTATTTACTAGCAAGTCAAAACTGATGTCTCTCGTCGGAAGAGGTTGGTATCT-AAAGCTGGTACTTTGGAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGAAGTTTATATCATGTAAATGTAATAGATCAGCACTTTAAAGGTTTGGTTTGTACCAATGTAAAGCAAATAATCTAGTTTGTAGTG----AGGATTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTGAATCAGAGACTGGGTCAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TATTGTAATGTATCAATTAACACCTTTATATTGTATTGACATATACTTTCTAATTATCTACATTTATTACATTGGGT
gi|1 : gtgtaaagTAGTGAGATGGATACATTTATTGCTCCATATCGACTAACAATTC---------TAATGGTCCGAATTTGCCCATACCCATTCCATGAAATATAAAATTCTAGATTCGCCACTTATAGAACTAGTATATACATTTT-ATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGATATTA-TGGATCCATATCGGCTAAAATATCCGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCAAAAATGAG--TTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAAATCCGCCACTTACAAAGCTTTTATGTACAGGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGC---AAATC---GC---AA---AA----AAAAAAAGAAGTCAGGAGTATAAGTGTAATTT-AATGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTTGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTGAAAGTTATAAAACAATTCTTTAGTACT-----GAAGGTCAAGC------AACATCTCTTGGTCATCTTACTAACAGATTATGAAGTGA----AACC-TTTTCTGCACAGAGGGTGCT-------ACA------TGCACTTATTTC--TTGGCTTCATAT-AAAATGCGCTCTTCGACTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagtgagatggatacatttattgctccatatcgactaacaattctaatggtccgaatttgcccatacccattccatgaaatataaaattctagattcgccacttatagaactagtatatacattttatttgttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagatattatggatccatatcggctaaaatatccgattttgtaataagtaaacaaaaaatggtccaaaaatgagtttgcccccacccattccatgaaatctaaaattttaaatccgccacttacaaagcttttatgtacaggtacattttatttgtaatcaatctgaaatagtgcaaatcgcaaaaaaaaaaagaagtcaggagtataagtgtaatttaatgctttattccattattcccaaaatcaccagttttgttatatatttcgatgtatttagccccaaaacttgaaagttataaaacaattctttagtactgaaggtcaagcaacatctcttggtcatcttactaacagattatgaagtgaaaccttttctgcacagagggtgctacatgcacttatttcttggcttcatataaaatgcgctcttcgacta
gi|10 : gtgtaaagtggacctgaaaactgcctgctaggaaagcagttttctccaggttgtgaattcaagagtgttttggatacatcgactattctatcaacaaaatgtagaatacctcaagtccgatactgaggaagcagacgtacaaatgatgctgaagttgagccccattcctactcatgatgtcgtagaaggctttagccaatccatctgctttgtcttacttgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatagctcttaatatatgaaagtcctctgacgtccacagaatattttcgcagttaggttaatctgaacattgtctggagggtgcttcagttcatatgagaagtgcgtctgtatcttgtatttgcccaataaccttgaatgtgttgctcatgatgccagataccgattgctctatctaaagagactgtgaaacaaaatttgtcaccactgtcaaaaagcttaaagcatcactaagttaacttccaatcactgttttggaagcattatttactagcaagtcaaaactgatgtctctcgtcggaagaggttggtatctaaagctggtactttggaaattcttctggtgctcaaggaacctgctcttagtgtattggtgaagtttatatcatgtaaatgtaatagatcagcactttaaaggtttggtttgtaccaatgtaaagcaaataatctagtttgtagtgaggattgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggtgaatcagagactgggtcagatgatgcttacatgcttctgctagtttatcatattgtaatgtatcaattaacacctttatattgtattgacatatactttctaattatctacatttattacattgggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTACCTGAAAATTGCCTGCTAGGAAAGCAGTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCGCCTATCCTATAAACATTATGT--------TGAAGTCTGATACTGAAGAAGCAGACGTACGTATGATGCTG---TTGAGTCCCATTCCTACTCATGATGTCGTTGAAGGCTTTGGCCAATCAATCT---------TACCTGCATTTCAATATATCACTGGATTCTTAAGTTCTTCAGTTGAAATAGGCAAGAGAATAGCTCTTAA-TCTATTAAAGTCCCCTGACGTCCACCAAGAAGAATTCTCGCAGTTAGGTTAATCTGAACATTTGTCTGAAGGGTGCTTCAGTTCATGTAAGAAGTGCGTCTGTACCTTGTATTTGTCCAATAACCTTGAAa
gi|11 : gtgtaaagGTGTTATTTCTAAA-TTTATTAAATGATTT-TCTAAAATCACCCGATTCGTAA-------TATATGCTAGTGCATTTTACCGCAGAACGAAAGAGATATATCACAATTCTTTAATACTTAATCTAAGGTCCTGC------AACAATCTTT-AGCATCCAACGAAC--AT-----AGTCA----AACA-TTGTCTCTACTGACGGAGCTACACAACACG------TGTACCTATATC--TAAGCTTCTTATAA
gi|12 : atttgcatcgactgatccatacctggcctgaaatgttggatctgtcctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacttaagagttcctCAATAGCCTTGAATTTGCATGTCGATGATGCCAGATACCGATTGTTTTGTTAAAAGAGACTGCGGAA-CA-AAATATACCACCATTTTCAAAAAACTTTAAGCGTCACTTA-----G--A----------ACTGTTTTT--AAAGCGTTCTTTACAAGCAATACAAA------ATC---------------TTGGTATTTCAAAAATAATATTTTGAAA---ATGCTTCTGGTGCCCAAGGAACCTGCTTCAAGAGGATTGGTTGAGATTACATCATGTAAATG---------------TTGGTGGGTTGGTTTTGGCCAATAAAAAGCAAACACTCCAGTTTGTACTG----AGGCTTGTGTATGTATGACACGTg
gi|13 : T------ACATTGGGTAT-CATTTCTA--TAATCAATATCAAATAGTGC---AAATC---GC---AA---AA----AAAT--------CAGGTGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTT-CC-AAAATCACCAGTTTCATTA-------TATATTTTGATGTATTTAGCCCCAAAACTTTAAAGTTATACCACAATTCTTTAGTACT-----GAAGGTCTTGC------AACATCACTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGAACAGAGGGTGAT-------ACG------TGCACCTTTTTC--TAGGCTTCACATAAAAATGCGCTTTTCGAC
gi|14 : tCATATAAGAAGTTTGTCTGTGCCTTGTATGTTCCCAATAACTCTGAATGTAC-GTCTGGTGACACTAGAT-CTGATTATTGTATCAAAAGAGTTTGTGGAA-CGCAAATATGCCGCTAATGTCACACAGCTAAACGCATCACTTAAACGTGTTAA
gi|14 : TGGTATCTCGAAATTAATACC-CTGACGCCCAAAAATCATACTTCAAGTAGATTGATTGCGCTTACATCGCGTAAATATAACAGGTCAGCA-----------TAG-TTGTGCCAGTGTAAAACAAtctgacatcttcagtaaaaagaaaatggtatctcgaaattaataccctgacgcccaaaaatcatacttcaagtagattgattgcgcttacatcgcgtaaatataacaggtcagcatagttgtgccagtgtaaaacaa
gi|15 : catataagaagtttgtctgtgccttgtatgttcccaataactctgaatgtacgtctggtgacactagatctgattattgtatcaaaagagtttgtggaacgcaaatatgccgctaatgtcacacagctaaacgcatcacttaaacgtgttaatctgacatcttcagtaaaaagaaaaATGT--G--TTATAAATCCAAGATAGTGA---AAAGCTATAC---AA---AT----TAC---------TAGGCGGCCAAGTATAATTT-CAAAACATATTCAAAAACTT-TT-AAAATCACGAGTTCCAATA--------ATATTATAATATTTTCGGTCCCAAA-CTAGAAAGTTATACCA-AGTTCTTTACTTTT-----TAATGTTCT-CAAAAAAAAAACCGTTTTGGCATCGAACTAACACCTTTTATAGTCA----AAC
gi|16 : aCTGAAAACTGCCTGCTGGGAAAGCATTTTTCTCCAGGTGGTGGGTTCAAGAGTGTTTTGGATACATCGACTATCCTGTCAACAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGCAGACGTACGTAT
gi|17 : tattgtaaagtgccgAATATGC-TGCTGATGACGCCAGATACCGATTGTTCTGTCAAAAGAGACTGCGGAA-CA-AAATATGTCACCGATGTCAAAAAGCTTAAA
gi|18 : CTAACA---TAT-AAGTCAGTATAACC-TTTTCTGTACAGACGATGCT-------ACGTGAACTTGCATCTATTTTTGTAGACTTCTTATAAAAATACACTTTTCGAcggtaaccaaaatgctaat
gi|2 : TGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTACTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCGACTTACCTATCAATAAAATGTAGAATACCTCAAGTCCGATACTGAGGAAGAAGACGTATATGTGATGCTGAACCTGAGCCCTATTTCTACTCATGATGTCGTAAAAGGCTTTGGCAAATCCATCTGCTCTGTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAAGCAAGAGAATAGCTCTTAA-TCTATGAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCGCAGTTAGGTTAATTTGAACA-TTGTCTGAAGGGTGCTTCAGTTCATATGAGAAGTGCGTTTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACGCCAGATACCGATTGCTCTGTCAAAAGAGACTGTGGAACCA-AACTATGTCACCATTGTCAAAAAGCTTAAAGCATTACTTA-----GTTAACTTCCAATCATGGTTTTG--GAAGCATTATTTACTAGCAATACAAGACTGATGTCTCTCGTCGGAAGAGGTTTGTATCT-ATAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATGTAAATGTAATAGATCAGCACTTTAAATGGTTGGTTTGTACCAGTGTAAAGCAAATAATCTAGTTTGTACTGAGGCAGGCTTGTATATGTGTGGCACGTGAAAAATATTTAA-GGGCATTACTCATGTAGGTGAATCAGAGACTGTGTCAGATGATGTTTACATGCTTCTGCTAGTTTATCA----TATTGCAATGTATCAATTAACACCTTTATATTGTATTTACATATACGTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGAT-AAAAAAC-C---TAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTGATGGTTTCATATTGACTAAAAATTC---------TAATGTTCCGAATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAGATTCGACACTTATAGAGCTAGTATATACATTTTTATTTGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATT-ATGGATCCGTATCGACTAAAAAATCCAA-TTTTGTAATAAATAAA-AAAAAA-TGGTCCAAAAATGAGAATTTGCCCCCACCTATTCCATGAAATCTAAAATTTTAGATCCGCCATTTATACAGCTTTTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAA-ACT-----------------------------------------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATAATTTACT-TAAATCACCAGTTTCGTTATACAATGTATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCACAATTCTTTAGTACT-----GAATGTCT-------------TCCCTTCGGCATCTAACTAACAGATTATGAAGACA----AACC-TTTTCTGTAAAGAGGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTCATATAAGAATGCGCCTTTCGACT
gi|3 : atTCACTTA-----GTTGACTTCCAATCACTGTTTTTTTGACGCATTATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGATGCTCAAGGAACCTGCTCTTAGTGTATTGGTGGAGTTTACATCATTT-AATGTAAAAGATCAGCACTTTTAATGGTTGATTTGTAACAATATAAAGCAAATAATCTAGTTTGCACAG----ATGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTAATTATCTAC--TTA-CACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAACATAGTCT
gi|3 : GATTCATATCGACTAAAATTTCAGAATTTTGTAATGGTCCGAATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATACATTTCTATTTATAAGCAATATGAAAAAGTACAGATTTGC------ATGAGTTAACAGACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCAACCAAATCCATGAAATCTAAAATTTTAGATCCGCCCCTTATAGAGCTATTATGTGCAAATCATGTGACATT-----T-CATTT--GC-TAA-CAATCTGAAATAGTGC---AAATC---ACAAAAA---AA----AAA---------CAGGAGTATAAGAGTAATTT-TAGGCTTTATTCCATTATTC-TC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACA-----GAAGGTCTTGC------AACATTCCTTGGGCATCTTACTCACAGATTATGAAGTTA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTATTTGACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactgattcatatcgactaaaatttcagaattttgtaatggtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaagtacagatttgcatgagttaacagactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgccccaaccaaatccatgaaatctaaaattttagatccgccccttatagagctattatgtgcaaatcatgtgacatttcatttgctaacaatctgaaatagtgcaaatcacaaaaaaaaaacaggagtataagagtaattttaggctttattccattattctcaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacattccttgggcatcttactcacagattatgaagttaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctatttgac
gi|4 : tcacttagttgacttccaatcactgtttttttgacgcattatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctgatgctcaaggaacctgctcttagtgtattggtggagtttacatcatttaatgtaaaagatcagcacttttaatggttgatttgtaacaatataaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttctaattatctacttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnactACTTA-----GTTGACTTCCAATCACTGTTTTTT-GACGCAATATTTACAAGCAATGCAAAACTGCTATCTCTTGTCGGACGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTCTTCTGGTGCTCAAGGAACCTGCTCTTAGTGTATTGGTTGAGTTTACATCATTAAAATGTAAAAGATCAACACTTTTAATGGTTGATTTGTAACAATGTAAAGCAAATAATCTAGTTTGCACAG----ATGCTTGTATATGTGTGGCACGTGAAAAATGTTT--------------ATGTAGGTGAATCAGACACTGGGTCAGATGATGCTTACATGCATCTGCTAGTTTATCATAATTACTGTAATGTATCAATAAATATCTTTATATTGTATTTACATATACTTTCTTATTATCT--TCTTA-CACATTGGGTATTATTTCTGATAAAAAAAA-C---TAAACATAGTCT
gi|4 : AGTGAGATGGATACATTTACTGATTCATATCGACTAAAATTTCAGAATTTTGTAATAGTCCGAATCTGCCCCCACCAATTCCATGAAATATAAAATTTTAGATTCGCTACTTATAGAGCTAGTATATACATTTCTATTTATAAGCAATATGAAAAGGTACAGATTTGC------ATGAGTTAACATACTGATGTAAGATAAAGACATTAATGGATCCATATCGACTAGAAAATCAGA-TTTTGTAATAAGTAAACAAAAAA-TGGTCCGAAAATGAGAATTTGCCCCCACCAAATCCATGAAATCTAAAATTTTAGATCCGGCTCTTATAGAGCTATTATGTACAAATCATGTGACATT-----T-TATTT--GCTTA--CAATCTGAAATAGTGC---AAATC---ACA--AA---AA----AAA---------CAGGAGTATAAGTGTAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCTAAAACATAAAAG-TATAGCACAACTCTTTAGAACA-----GAAGGTCTTGC------AACATCCCTTGGGCATCTATCTCACAGATTATGAAGTCA----AACCATTTTCTGTACAGACGGTGCT-------ACG------TGCACCTATTTC--TAGGCTTTATATAAAAATGAGCTCTTTGACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagtgagatggatacatttactgattcatatcgactaaaatttcagaattttgtaatagtccgaatctgcccccaccaattccatgaaatataaaattttagattcgctacttatagagctagtatatacatttctatttataagcaatatgaaaaggtacagatttgcatgagttaacatactgatgtaagataaagacattaatggatccatatcgactagaaaatcagattttgtaataagtaaacaaaaaatggtccgaaaatgagaatttgcccccaccaaatccatgaaatctaaaattttagatccggctcttatagagctattatgtacaaatcatgtgacattttatttgcttacaatctgaaatagtgcaaatcacaaaaaaaacaggagtataagtgtaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccctaaaacataaaagtatagcacaactctttagaacagaaggtcttgcaacatcccttgggcatctatctcacagattatgaagtcaaaccattttctgtacagacggtgctacgtgcacctatttctaggctttatataaaaatgagctctttgac
gi|5 : acttagttgacttccaatcactgttttttgacgcaatatttacaagcaatgcaaaactgctatctcttgtcggacgaggttggtatctaaagctggtactttgaaaattcttctggtgctcaaggaacctgctcttagtgtattggttgagtttacatcattaaaatgtaaaagatcaacacttttaatggttgatttgtaacaatgtaaagcaaataatctagtttgcacagatgcttgtatatgtgtggcacgtgaaaaatgtttatgtaggtgaatcagacactgggtcagatgatgcttacatgcatctgctagtttatcataattactgtaatgtatcaataaatatctttatattgtatttacatatactttcttattatcttcttacacattgggtattatttctgataaaaaaaactaaacatagtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncTGCTCTTAGAATATTGGTGGAGTTTACATCATGTTAATGCAATAGATCAGCACATAAAACGGTTGATTTGTATCACTGTAAAGCAAATAATCTAGTTAGTACTG----AGGTTTGTATATGTATGGCACGTGAAAAATGTTTAAAGGGCATTACTCATGTAGATGAATTAGACACCTGGTAAGATGATGCTTACATGCTTCTGCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTGTATTAACATATACTTTCTAAGTATCTTCTTTTATTACATTGGGTATTATTTCTGATAAAAAAAA-CAACTAAGCATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGAGATGGATACATTTATGGATCCATATCGACAAAAAATTCAGAATTTTGTAATGGTCCGAATTTGCCCCCACCCATTCCATGAAATATAAAATTCTGGATTCGCCATTTATAGAGCTAGTATATACATTTTTATTTGTAATCAATATAAAAAAGTACAAATTTGCCTACGCATGATTTAACAAACTGATGTAAGATAAAAACATTAATGGATCCATATCGACTAAAAAATCAGA-CTTTGTAATAAGTAAACAAAAAAATATTCCGAAAATGAGAATTTGCCAACACCCATACCA-GAAATCTAAAATTTTAGATCCGCCACTTATAGAGCTATTAAGTACAAGT------ACATT-----T-TATTT--G--TTATCAATCTGAAAAAGTGC---AAATC---GC---AACAAAA----AAA---------CAAGAGTATAAGTGCAATTT-TAGGCTGTATTCCATTATTC-CC-AAAATCACCAGTTTCGATA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAAAGTTATACCATAATTCTTTAGGACT-----GAAGGTCTTGC------AACATCCCTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCATCTAGTTC--TAGGCTTCATATAAAAATGCACTCTTCGACT
gi|6 : TGTATTGGTGGAGTTTACATCATGTAAATGTAACAGATCAGCTCTTTAAAGGGTTGGTTTGTACCAATGTTAAGCAAGTAATCTAGTTTGTACTG----AGGCTTGTATATGTGTGGCACGTGAAAAATGTTTAA-GGGCATTACTCATGTAGGTTAATCAGACACTGGGTCAGTTGCTGTTCACATGCTTCTGCTAGTTTATCG----TATTGTAATGTACCAATTAACACCTTAATATTGTATTTACATATACTTTCTAATTATCTACTTTTATTACATTGGGTATTATTTCTGATAAAAAAAACC---TAAGCATTATCT
gi|6 : TAGTGAGATGGATACATTTATGGATCTATATCGACTAAAAATAC---------TAATGGTCCGAATTTGCCCCTACCCATTCCATGAAATATAAAATTCTAAGTTCGCCACTTATAGAGCTAGTAGATACACTTTTATTAGTTATCAATATGAAAAAGTACAAATTTGCCTACGCATGATCTAACAGATTGTTGTAAGATAAAGACATTA-TGGATAGATATCGACTAAAAAATCCGA-TTTTGTAATGAGTAAACAAAAAA-TGGTCCAAAAATGAAAATTTGCCCCCACCCATTCCATGAAATCTAAAATTTTAGATCTGCCAATTATAGATCTTTTATGTACAAGT------ACATT-----T-TATTT--G--TAATCAATCTGAAATAGTGCAAAAAATC---GC---AA---AA----ACAT--------CAGGAGTATAAGTGAAATTT-TAGGCTTTATTCCATTATTC-CC-AAAATCACCAGTTTCGTTA-------TATATTTCGATGTATTTAGCCCCAAAACTTAAGA--TATACCACATTTCTTTAGTACT-----GAAGGTCTTGC------AACATCCTTTGGGCATCTAACTAACAGATTATGAAGTCA----AACC-TTTTCTGTACAGAGGGTGCT-------ACG------TGCAACTATTTC--TAGGCTTCATATAAAAATGAGCTCTTCGACTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttagtgagatggatacatttatggatctatatcgactaaaaatactaatggtccgaatttgcccctacccattccatgaaatataaaattctaagttcgccacttatagagctagtagatacacttttattagttatcaatatgaaaaagtacaaatttgcctacgcatgatctaacagattgttgtaagataaagacattatggatagatatcgactaaaaaatccgattttgtaatgagtaaacaaaaaatggtccaaaaatgaaaatttgcccccacccattccatgaaatctaaaattttagatctgccaattatagatcttttatgtacaagtacattttatttgtaatcaatctgaaatagtgcaaaaaatcgcaaaaacatcaggagtataagtgaaattttaggctttattccattattcccaaaatcaccagtttcgttatatatttcgatgtatttagccccaaaacttaagatataccacatttctttagtactgaaggtcttgcaacatcctttgggcatctaactaacagattatgaagtcaaaccttttctgtacagagggtgctacgtgcaactatttctaggcttcatataaaaatgagctcttcgacta
gi|7 : tgtattggtggagtttacatcatgtaaatgtaacagatcagctctttaaagggttggtttgtaccaatgttaagcaagtaatctagtttgtactgaggcttgtatatgtgtggcacgtgaaaaatgtttaagggcattactcatgtaggttaatcagacactgggtcagttgctgttcacatgcttctgctagtttatcgtattgtaatgtaccaattaacaccttaatattgtatttacatatactttctaattatctacttttattacattgggtattatttctgataaaaaaaacctaagcattatctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntTGGACCTGAAAACTGCCTGCTGGGAAAGCAGTTTTCTCCAGGTTGTGGGTTCAAGAGTGTTTTGGATACATCTACTATCCCATCAACAAAATGTAGAATACCTCAAGTCCAATACTGAGGAAGCAGACGTACATATGATGCTGAAGTTGAGTCCCATTTCTACTCATGATGTCGTAGAAGGATTTGGCCAATCTCTCTGTTCTCTCTTACCTGCAGTTCAATGTATCACTGGATTCATTAGTTCTTTAGTTGAAATAGGCAAGAGAATGGCTCTTAATTCTATAAAAGTCCTCTGACGTCCACCGAGAAGAATTGTCTCAGTAAGGTTAAACTGAATA-TTGTCTGAAGGGTGCTTCAGTTCATGTGAGAAGTGCGTCTGTACCTTGTATTTGCCCAATAACCTTGAATGTGC-TGCTGATGACACCAGATACGGATTGCTCTGTCAAAAGAGACTGCGGAA-CA-AA--ATGTTATCATTGTCAAAAAGCTTAAAGCATCACTTA-----GTCAACTTCCAA-------CTTC--CAAACACTATTTACTAGCAATA----------------CGTCGTAAGAGGTTGGTATCT-AAAGCTGGTACTTTGAAA---ATTATTTTACTGCTCAAGGAACCTGCTCTTAGTGTATTGGAGGAGTTTACATCATCTAAATGTAATAGATCAGCACTTTTAAGGGTTGGTTTGTACAAATGTAAAGCAAATAATCTAGTTTGTACT-----AGAC----AT---------------------TTAAG-GG-CATTACTCATGTGGGTGAATCAGAGACTGGGTCAGATGATGCTTACATGCTTTTTCT--TTTATTA----CATTG---GGTATCAa
gi|7 : agtgtaaagCTTTTATTACATTGGGTATCATTTCT-ATAAtttctataatcaatatcaa
gi|8 : agtgtaaagtggacctgaaaactgcctgctgggaaagcagttttctccaggttgtgggttcaagagtgttttggatacatctactatcccatcaacaaaatgtagaatacctcaagtccaatactgaggaagcagacgtacatatgatgctgaagttgagtcccatttctactcatgatgtcgtagaaggatttggccaatctctctgttctctcttacctgcagttcaatgtatcactggattcattagttctttagttgaaataggcaagagaatggctcttaattctataaaagtcctctgacgtccaccgagaagaattgtctcagtaaggttaaactgaatattgtctgaagggtgcttcagttcatgtgagaagtgcgtctgtaccttgtatttgcccaataaccttgaatgtgctgctgatgacaccagatacggattgctctgtcaaaagagactgcggaacaaaatgttatcattgtcaaaaagcttaaagcatcacttagtcaacttccaacttccaaacactatttactagcaatacgtcgtaagaggttggtatctaaagctggtactttgaaaattattttactgctcaaggaacctgctcttagtgtattggaggagtttacatcatctaaatgtaatagatcagcacttttaagggttggtttgtacaaatgtaaagcaaataatctagtttgtactagacatttaagggcattactcatgtgggtgaatcagagactgggtcagatgatgcttacatgctttttTACATGCTTCTTCTAGTTTATCA----TACTGTAATGTATCAATAAACACCTTTATATTTTATTTACAAATACTTTCTATTTATCTACATTTTTTACAATGGATATTAATTTTGATTAAtcaatatcaa
gi|8 : ATCAA-GGATCCATATCGACTAAACATTCAGAATGCTGTAATA-GTAAATAAAA-A-TGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATT-----TGTATTT--G--TAATCAATCGGAAATAGTGC---AAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatataatcaaggatccatatcgactaaacattcagaatgctgtaatagtaaataaaaatggtccgagaatgagaatttgccccaaccctttccatgatttctaaaattttagatccgccatttatagagctattttgtaacacttcatttgtatttgtaatcaatcggaaatagtgcaa
gi|9 : tacatgcttcttctagtttatcatactgtaatgtatcaataaacacctttatattttatttacaaatactttctatttatctacattttttacaatggatattaattttgattaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagatgtatataATCAA-GGATCCATATCGACTAAACATTCAGAATGCTGTAATA-GTAAATAAAA-A-TGGTCCGAGAATGAGAATTTGCCCCAACCCTTTCCATGATTTCTAAAATTTTAGATCCGCCATTTATAGAGCTATTTTGTAACACT------TCATT-----TGTATTT--G--TAATCAATCGGAAATAGTGC---AAAC-----C---AA---AACATTAAA---------CAAGAGTATAAATGTTATTT-TAGACGTTATTCCATTATTC-TC-AAAATCACCAGATTCGTTA-------TACATTTCGATGT------------------AAAGTTATACTACAATTCTTAAGTACT-----GAAGTTCTTGC------AACATCCTTTGGGCATCTAATTAGCAGATTATGAAGTCA----AACC-TTTTCTATATAGACAGTGCT-------ACT------AGCACCTATTT---TAGGCTTCATATAGAAATGCGCTCTTCAAC