lowQualScore : 11111111111111
lowQualScore : 111 11 1 11 11111111111111 22 1 1 55555555555555555555555555555555555 1111111 1 1 1 111 22 1 4 4444 4444 2222 1 1111 1111 1
lowQualScore : 3 444 2 555 22 6666666 6 4444 11 22 333 2 4 2 777 2 2 66 8888888 9999999 4 88888888888888 77 3 1 77 3 3 3 8 3 6 77777777777777777777777777777777777 3333333 6 6 9999 66 4 5 7 5 1 3 6 3 0 8 111 44 9 0 0 3 5555 4 2222 6 0000 3 4444 4 8 7777 0 6 6 6 1
lowQualScore : . ... . ... .. ....... . .... .. .. ... . . . ... . . .. ....... ....... . .............. .. . . .. . . . . . . ................................... ....... . . .... .. . . . . . . . . . . ... .. . . . . .... . .... . .... . .... . . .... . . . . .
lowQualScore : 1 333 1 888 88 2222222 4 2222 44 88 555 0 9 0 777 4 4 88 7777777 3333333 2 00000000000000 55 3 3 88 3 3 5 4 1 8 33333333333333333333333333333333333 0000000 6 4 4444 11 4 4 1 7 4 3 7 2 8 8 222 88 0 0 0 2 0000 0 5555 7 0000 3 3333 0 3 0000 7 0 0 7 5
consensus : ATAC-AAGCTATATAAAT--GGG-GAG---TTTT-TT-----TTATGTCNTTACAATT----ATACAGAAG--ATCTCCACCAG---GATGAT-TGATTTTA-ACATTA--TT-TT-TANCATGATA-------TA-------GTTCTAAATTAATCA------A---AAAAGACAAAAGTGGCAAGAAGAATAA-GATATAATTATATTAAANATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGGCTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACANATAAAAGAATTATTATACCA-A-TTT-TATTTCTACCAGGTATTCCAAACGGTTTAACAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTCCGCTTTTCCAAGTGAGAACAANAAAAGNAGGAAGAGATGATGAAACAACAGGGAACACA-TTTGGCAGT-TTGTTTGAACATATTTNATTTATTTGATGATTGGTCTAGGCAACAATTATGAGTAACAGTTGACCATGTTANTT
Reference ( gi|1 ) : ATAC-AAGCTATATAAAT--TGG-GAG---TTTT-TT-----TTATGTCATTACAATT----ATATCGAAG--ATCTCCACCAA---AATGAT-TGATTTGA-ACATTA--TT-TT-TAACATGATA-------TA-------GTTCTAAATTAATCAGAAGACAATCAGAAGACAAAAGTAGCAAGAAGAAATA-GATATAATTATATTAAGAATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATACAAACATTTGACTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACAAATAAAAGAATCATTATACCA-A-TTT-TATTTCTACCAGGTATTCCAACCGGTTTAACAATACAAATTATATAAAAAAAAAATTAAAGTACA-AAAAATAGCAATAAAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--CAAAAAAAGGAAAAGA----GAAACAACAGGGAACACA-TATGGCAGT-TTGTTTAAACATATTTTATTTAATTGATGATTGGTCTATGCTACAGTTACGAGTAACAATTGACCCTGTTAATT
gi|2 : ATACCAAGCTATATTAAT--------G---TTTT-TT-----C---ATCATTACAATT----ATATAGAAG--ATCTCCACCAG---AATGAT-TGATTTTA-ACATTA--TT-TT-TATCATGAAA-------TA-------GTTCTAAATTAATCAAAAGACAA----AAGA-------AGCAAGAAGAATAA-AATATAATTATATTAAGAATAAATTATCAAGACAAACA-GA-AAATATTACAGAGATCTTTTCAATTCATATAGATGGCTTTTCACCAT------GT--------AA--------AAGTAACGACAT-------TTTTTCCCCTGAAAA----CCCAGC--CT-TTAATATCACATATAAAAGAATAATTATACCACG-TTT-TAGTTCTACCAGGTATCCCAAACGG-TTAATAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAACAAT-AAAAAAAGGCAAAATATTTATTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAACAAAAAAAAAAGGAAAAGA----GAAACAACAGGGAACCCA-TTTGGCAGT-TTGTTTGCACATATTTCATTTAATTGATGATTGGTTTAGGCAACAATTATGAGTAACAGTTGACCCTGTTAG
gi|5 : tattATAC-AAGCTTTATAAAT--AGG-GAGG--TTTT-TT-----TTATGTCATTACAATT----ATACAGAAG--ATCTCTACCAG---AATGAT-TGATTTTA-ACATTA--TT-TT-TATCATGATG-------TA-------GTTCCAAA-----------ATAATCAAAAGACAAAAGTAGCAAGAAGAATAA-GATATAATTAAATTAAGAATAAATGATAAAGACAAACA-AA-AATTATTACAGAAATCTTTTCAATTCATACATTTGACTTTTCACCATGTAAAAGT--------AA--------A--------GAT-------TTTTTTCCCAGAAAA----CCCAGC--CT-TTAATATCACATATAAAATAATTATTATACCA-AGTTT-TATTTCTGCCGGGTATTC
gi|3 : tattATAC-AAGCTATATAAAT--GGG-GA----TTTT-TT-----TTATGTCATTACAATT----ATATAGAGG--ATCTCTACCAA---AAAGAT-TGATTTCA-ACATTA--TT-TT-TAACATGATA-------TACAATGTAATTCTAAATTAATCA------------AAGACAAAAGTAGTAAGAAGAATAA-GATAAAATTATATTAAGCATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AAAAGTAACGA--------CAT-------TTTTTT-CCTGAAAA----CCAAGC--CT-TTAATATCACAAATAAAAGAATTATTATACCttagaaaaagtttg
gi|6 : ttgtaagtatgtataacatggagcatataaaaaccacaaaaaaaaacaatgcatattATAC-AAGCTATATAAATGGTGA-GGG---TTTT-ATCAGGGTTATGTCATTACAATT----ATACCGAAG--ATCTCCACCAA---AATGAT-TGATTTTA-ACATTA--TT-TT-TAACATGATA-------TA-------GTTCTAAATTAATCAAAAG-----------ACAAAAGTAGCAAGAAGAATAA-GATATAATTATATTAAGAATAAATGATCAAGACAAACA-AA-AATTAATACAGAGATCTTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AAAGGTAACGA--------CAT-------TTTTTT-CCCGAAAA----CCCAGT--CT-TATATATTACAAATCAAAGA
gi|7 : ggagcaaacaaaaatacataaaaaatgcatattATAC-AAGCTATATAAAT--GGG-GAT---TTTT-TT-----TTATATCATTACAAT-----------AAG--ATCTCAACCAG---GATGAT-TGATTTTCTACATTA--TT-TTCTATCATGATA-------TA-------GTTCCAAATTAATCAAAAAACAA-----------AAGTGGTAAGAAAAAATAAGATGTAATTATATT--------------------------A-AATTA------ATATTTTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AACAGGAAAGA--------CAT-------TTTTTTTATCGAACA----CCCAGC--CT-TTAATATCACAAATAAAATAATTACTAAACCA-AGTTT-TATTTCTACCAGGTATTCCAATCGGTTTAACATTA
gi|4 : tgcatatcATAC-GAGCTATATAAAA--GGG-CAG---TTTT-T--------ATGTCTTTACAGT-----ATATAGAAT--ATCTCCACCAG---GATGAT-TAATTT------TT---TT-TT-T--CATGATA-------TA-------GTTCTAAATTAATCAAAAGACAA-------AC----GTGACAAGAAGAATAA-GATATAATTATATCAAATATAAATAATCAAGACAAACA-AA-AA--A--AAAAAGAACTTTTCATTTCATACATTTGGCTTTTCACAAT------GT--------AA--------A--------TGTTAAGAAATCTTTTCCCCGAAAA----CCCAGTGATA-TTAA-ACCACATATAAAAGAATTATTATTCCA-A-GTTATATTTCTACCAGGTATT-CAAACAGTTTAACAAAACGCATTATATTAAAAAACAA-CAAGGAACA-a
gi|9 : taATAA-GAGCTATATTAAT--TGG-GAA---CTGT-TT-------ATGTCTTTACAGTT----ATACACAAG--ATCTCCACCAG---GATGAT-TAATTTTA-ACATTA--TT-TC-TTTCCTGATA--------A-------GTTCTAAATT-AT-----GCCA-----AAGACAAAAGTGGCAAGAAGACAAA-GATATAGTTATATTAGATATAAAAAATCAAGACAAACATAA-TATTGATACAGAGATTTTTTCAATTCATACATTTGGCTTTTCACCAT------ATAAAAGTAAAA--------A--------CAT-------TTTTTCCC
gi|10 : tattATAC-AAGCTATATAAAT--GGG-GGA---TTTT-TT-----TTAAGTC-TTACAATT----ATATAGAGG--ATCTCCACCAA---AATGAT-TGATTTTA-ACATTAT-TT-TT-TCACATGATATACAATGTA-------GTTCTAAATTAATCA------------AAGACAAAAGTAGTAAGAAG
gi|17 : aaaaacaaaaaacaatgcatattATAC-AAGCTTTATAAAT--AGG-GAG---TTTT-TC-----TTATGTCATTACAATT----ATATAGAAG--ATCTCCACCAA---AATGAT-TGATTTTA-ACCTTA--TT-TT-TGACATGATA-------TA-------GTTCTAAATTcatttcctgaatacacggcctttaatatcacaaatcaaagaattattataccaa
gi|19 : aaagcaatgcttattATAC-ACGCTATATAAAT--GGG-GAGGTTTTTT-TT-----TTATGTCATAACAATT----ATATAGAAA--ATCGCCACCAA---AATGAT-TGATTTTA-ACATTAT-TT-TT-TATCATGATA-------T
gi|23 : ttATAG-GAGTTACACAATT--GGG-GAG---TATG-TT-----TAA-GACTTTACAATT----ACACAGAAG--ATCTCCACCAATTTGACAAT-TG--TCAA-ACAT
gi|13 : tC-AAGCTATATAAAT--GGG-GAG---TTTT--T-----TTATGTCATTACAATT----ATATCGAAG--GTCTCCACCAA---AATGAT-TGATTTTA-ACATTA--TT-TT-TAACATGATA-------TA-------GTTCTAAATTAATC-----------AAAAGACAAAGGTAGCAAGAAGAATAA-GATA-AATTATATTAAAAATAAATGATCACGACAAACA-AA-AA
gi|14 : C-AAGCTATATAAAT--GGG-GAG---TTTT--T-----TTATGTCATTACAATT----ATATCGAAG--GTCTCCACCAA---AATGAT-TGATTTTA-ACATTA--TT-TT-TAACATGATA-------TA-------GTTCTAAATTAATC-----------AAAAGACAAAGGTAGCAAGAAGAATAA-GATA-AATTATATTAAAAATAAATGATCACGACAAACA-AA-A
gi|8 : AGCTATATTAAT--GTG-GAG---TTTT-TT-----A-ATGTCTTTACAATT----TTACAGATG--ATCAACACCAG---GATGAT-CAATTTTA-ACATTGTTTT-TT-TTTCATGTTA-------TT-------GTTTTATGT--------------TCAAAAGACAAAAATGGCAAGAAGAATAA-GATATTATTATATCAAATATTAATGATTAAAACAAACA-AA-A-----TATA------TTGTCAATGCATATATTT-AGTTTTTACAAT------GT--------AA--------A--------AGT-----------------AAAGAACCCCCCAGC--CTGTTAATATCACATATAAAAGGAATATTAT
gi|22 : aagAGCTATATAA-T--TGGTGAG---GTTTGTT-----TTGTGACTTTAAAATTTTACATATT------ATTTCCACCAA---GATGGT-TAGTCCAA-ACATTT--TTATT-T--CATG
gi|24 : taagCTATATAAAT--GGT-GAG---TCTT-T--------ATGTCTTTATAGTT----ATACCGAAA--ATATCCACCAG---GATGATACAATTTTA-ACATTA--ct
gi|12 : TATGAAAAT--GAG-GAG---TTCT-GT-----TT--GTCTTTACAACT----ATACAGAAG--ATATCCACTAG---GATGAA-TAATATTA-ACATTA--TT-TT-T--TATGATA-------TA-------GTTCTATATT-AT----------TCAAAACATAAAAATGGCAAGAAGAATAA-GATATAATTATATCAAACATAAATGATTAAAACAAACA-AA-AAAAATGATAGAGATCTTTTCAATACA
gi|25 : --TGG-GAG---TTAT-TT-----T-ATGTCTTTACAGTT----ATA---AAGGGATCTCCACAAG---GATAAT-TAATTTTA-ACAt
gi|15 : -GAG---TTTT--T-----TTATGTCTTTACAGTT----ATAGAGAAG--ATCTCCACCAG---GATGAT-TAAGTTTA-ACATTT--TT-TT-TTTCATGATA-------TA-------GTTCT-AATTTAT----------TCAAAAGACAAAAGTGGCAATAAGGATAA-GATATAATTTAATTAATTATAAATGATCTAGACAAACA-AACAATTa
gi|20 : a-TT-----TTATGTCTTTACAATT----GTACAGCAA--ATCGCCACCAA---ATTGAT-ACATTAAA-ACATT---TT-TC-T--CATGgata
gi|11 : atgcatatcataatagctttataatcggtaaaTATTACAGAGATCTTTT-------------TGGCTTTTTGCCAAAAGA--GA--------AA--------C--------CAT-------CGTATTCCC-GAAAA----CCAAGC--CT-TTAATATCACATATAAAATATCTATTTTACCA-A-GTTATATTTCTACCATGTATT-CAAACAGTTTAACAATACGAAATATATAATAACAAA--TACAGTACACAGAAAAAGCAAT--TAAAAAGGCAAAATATTTCTTTTGGAGATGTGAttttaa
gi|10 : --------AA--------G--------CAT-------TT-----CCTGAATA----CACGGC--CT-TTAATATCACAAATCAAAGAATTATTATACCA-A-
gi|18 : aaaaacaaaaaacaatgcatattatacaagctatataaatgggggattttttttaagtcttacaattatatagaggatctccaccaaaatgattgattttaacattattttttcacatgatatacaatgtagttctaaattaatcaaagacaaaagtagtaagA-A-TTT-TATTTCTACCAGGTATTCCAAACGGTTTAACAATTCTAGTTATAT-ATTAAAAAATTACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGA
gi|16 : tgatatagttctaaattTGTTTCTTT-GGAAATGTTCCTCCGTTTTTCCAAGTGAGAA---CAAAAGTAGAAAGAGATGATGAAA-AACTGGGAACAAACTA-GACAGTAATG----ATCAGATTTGATTTATTGGATGTTTGGTCTGGAATACAAGTATGAGTTATAGGTTACTATGTT
gi|21 : AAACAACAAGGAACACA-TTTGGTAGT-TTGTTTGAACATACTTTATTTATTTGATGATTGGTCTAGGCAACAGTTATGAGTAACAGTTGACCATGTTATTTg
Alignments
lowQualScore : 1111 22222222222 44444444444444444444444444444444444 1111111 1 1 111 1 1 11 222 11 4444
lowQualScore : 2 777 7777777777 2 0 333 1 1 6666666 2 0000 8888888 8888888 2 99 44444444444 2 0 22 3 3 2 6 0 77777777777777777777777777777777777 1111111 5 4 8888 55 4 1 5 0 1 4 000 11 0 0 0 33 0 0 0 0 000 77 0 4444 2 3 1 4 4 3 1
lowQualScore : . ... .......... . . ... . . ....... . .... ....... ....... . .. ........... . . .. . . . . . ................................... ....... . . .... .. . . . . . . ... .. . . . .. . . . . ... .. . .... . . . . . . .
lowQualScore : 9 999 1111111111 9 4 333 9 9 5555555 2 6666 1111111 7777777 9 11 66666666666 9 5 77 1 1 4 8 1 77777777777777777777777777777777777 8888888 1 8 5555 55 0 0 0 0 4 3 000 88 8 0 0 22 8 7 7 7 000 77 7 3333 5 2 0 0 0 0 0
consensus : ATAC-AAGCTATATAAATGGGGAG---TTTT-TT-----TTATGTCNTTACAATTATACAGAAGATCTCCACCAG---GATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA---------AAGACAAAAGTGGCAAGAAGAA-TAAGATATAATTATATTAAGNATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGGCTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACANATAAAAGAATTATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC-AAAAAAG-AGGAAAAGA----GAAACAACAGGGAACACATTTGGCAGTTTGTTTGAACATATTTTATTTANTTGATGATTGGTCTAGGCNACAGTTATGAGTAACAGTTGACCNTGTTANTT
Reference ( family-3146 ) : ATAC-AAGCTATATAAATGGGGAG---TTTT-TT-----TTATGTCNTTACAATTATACAGAAGATCTCCACCAG---GATGAT-TGATTTTA-ACATT-----A-TTTT-TAN--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA---------AAGACAAAAGTGGCAAGAAGAA-TAAGATATAATTATATTAAANATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGGCTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACANATAAAAGAATTATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTCCGCTTTTCCAAGTGAGAACAANAAAAGNAGGAAGAGATGATGAAACAACAGGGAACACATTTGGCAGTTTGTTTGAACATATTTNATTTATTTGATGATTGGTCTAGGCAACAATTATGAGTAACAGTTGACCATGTTANTT
gi|1 : ATAC-AAGCTATATAAATTGGGAG---TTTT-TT-----TTATGTCATTACAATTATATCGAAGATCTCCACCAA---AATGAT-TGATTTGA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATCAGAAGACAATCAGAAGACAAAAGTAGCAAGAAGAA-ATAGATATAATTATATTAAGAATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATACAAACATTTGACTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACAAATAAAAGAATCATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AACCGGTTTAACAATACAAATTATATAAAAAAAAAATTAAAGTACA-AAAAATAGCAATAAAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAACCAAAAAA--AGGAAAAGA----GAAACAACAGGGAACACATATGGCAGTTTGTTTAAACATATTTTATTTAATTGATGATTGGTCTATGCTACAGTTACGAGTAACAATTGACCCTGTTAATT
gi|10 : ATAC-AAGCTATATAAATGGGGGA---TTTT-TT-----TTAAGTC-TTACAATTATATAGAGGATCTCCACCAA---AATGAT-TGATTTTA-ACATT-----ATTTTT-TCA--CATGATATACAATGTA-------GTTCTAAATTA-ATC---A---------AAGACAAAAGTAGTAAGAAGCA-T
gi|10 : aaaaacaaaaaacaatgcatatt--------AA--------G--------CAT-------TT-----CCTGAATA----CACGGC--CT-TTAATATCACAAATCAAAGAATTATTATACCA-A-ttcctgaatacacggcctttaatatcacaaatcaaagaattattataccaa
gi|11 : aaaaacaaaaaacaatgcatattatacaagctatataaatgggggattttttttaagtcttacaattatatagaggatctccaccaaaatgattgattttaacattattttttcacatgatatacaatgtagttctaaattaatcaaagacaaaagtagtaagTATTACAGAGATCTTTT-------------TGGCTTTTTGCCAAAAGA--GA--------AA--------C--------CAT-------CGTATTCCC-GAAAA----CCAAGC--CT-TTAATATCACATATAAAATATCTATTTTACCA-A-GTTATATTTCTACCATGTATT-C---AAACAGTTTAACAATACGAAATATATAAT-AACAAA-TACAGTACACAGAAAAAGCAAT--TAAAAAGGCAAAATATTTCTTTTGGAGATGTGA
gi|12 : TATGAAAATGAGGAG---TTCT-GT-----TT--GTCTTTACAACTATACAGAAGATATCCACTAG---GATGAA-TAATATTA-ACATT-----A-TTTT-T----TATGATA-------TA-------GTTCTATATTA-TTCAAAA---------CA--TAAAAATGGCAAGAAGAA-TAAGATATAATTATATCAAACATAAATGATTAAAACAAACA-AA-AAAAATGATAGAGATCTTTTCAATACAT
gi|13 : C-AAGCTATATAAATGGGGAG---TTTT--T-----TTATGTCATTACAATTATATCGAAGGTCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATC--AA---------AAGACAAAGGTAGCAAGAAGAA-TAAGATA-AATTATATTAAAAATAAATGATCACGACAAACA-AA-AA
gi|14 : C-AAGCTATATAAATGGGGAG---TTTT--T-----TTATGTCATTACAATTATATCGAAGGTCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATC--AA---------AAGACAAAGGTAGCAAGAAGAA-TAAGATA-AATTATATTAAAAATAAATGATCACGACAAACA-AA-A
gi|15 : GAG---TTTT--T-----TTATGTCTTTACAGTTATAGAGAAGATCTCCACCAG---GATGAT-TAAGTTTA-ACATT-----T-TTTT-TTT--CATGATA-------TA-------GTTCTAATTTA-TTC--AA---------AAGACAAAAGTGGCAATAAGGA-TAAGATATAATTTAATTAATTATAAATGATCTAGACAAACA-AACAATT
gi|16 : aTGTTTCTTT-GGAAATGTTCCTCCGTTTTTCCAAGTGAGAAC---AAAAGTAGAAAGAGATGATGAAA-AACTGGGAACAAACTAGACAGT---AATGATCAGATTTGATTTATTGGATGTTTGGTCTGGAATACAAGTATGAGTTATAGGTTACTATGTTgata
gi|17 : ATAC-AAGCTTTATAAATAGGGAG---TTTT-TC-----TTATGTCATTACAATTATATAGAAGATCTCCACCAA---AATGAT-TGATTTTA-ACCTT-----A-TTTT-TGA--CATGATA-------TA-------GTTCTAAATTg
gi|18 : aaagcaatgcttattA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATTCTAGTTATATATTAAAAAAT-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGA
gi|19 : tgatatagttctaaattATAC-ACGCTATATAAATGGGGAGGTTTTTT-TT-----TTATGTCATAACAATTATATAGAAAATCGCCACCAA---AATGAT-TGATTTTA-ACATT-----ATTTTT-TAT--CATGATA-------T
gi|2 : ttATACCAAGCTATATTAATG---------TTT-TT-----TCAT--CATTACAATTATATAGAAGATCTCCACCAG---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGAAA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAAAGAAGCAAGAAGAA-TAAAATATAATTATATTAAGAATAAATTATCAAGACAAACA-GA-AAATATTACAGAGATCTTTTCAATTCATATAGATGGCTTTTCACCAT------GT--------AA--------AAGTAACGACAT-------TTTTTCCCCTGAAAA----CCCAGC--CT-TTAATATCACATATAAAAGAATAATTATACCACG-TTT-TAGTTCTACCAGGTATCCC---AAACGG-TTAATAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAACAAT-AAAAAAAGGCAAAATATTTATTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAACAAAAAAAAAAGGAAAAGA----GAAACAACAGGGAACCCATTTGGCAGTTTGTTTGCACATATTTCATTTAATTGATGATTGGTTTAGGCAACAATTATGAGTAACAGTTGACCCTGTTAG
gi|20 : tattAGCTTTATAATCGGTAAA---TTTT----------ATGTCTTTACAATTGTACAGCAAATCGCCACCA-------AAT-TGAT-----ACATTAAAACA-TTTT-TCT--CATG
gi|21 : atgcatatcataatAAACAACAAGGAACACATTTGGTAGTTTGTTTGAACATACTTTATTTATTTGATGATTGGTCTAGGCAACAGTTATGAGTAACAGTTGACCATGTTATTTttttaa
gi|22 : aAGCTATATAATTGGTGAG---GTTTGTT-----TTGTGACTTTAAAATTTTACATATTATTTCCACCAA---GATGGT-TAGTCCAA-ACATT-------TTTA-TTT--CATGt
gi|23 : taagATAG-GAGTTACACAATTGGGGAG---TATG-TT-----TAA-GACTTTACAATTACACAGAAGATCTCCACCAATTTGACAAT-TG--TCAA-ACATct
gi|24 : tCTATATAAATGGTGAG---TCTT-T--------ATGTCTTTATAGTTATACCGAAAATATCCACCAG---GATGATACAATTTTA-ACATT-----A-
gi|25 : GGGAG---TTAT-TT-----T-ATGTCTTTACAGTTATAAAGG-GATCTCCACAAG---GATAAT-TAATTTTA-ACA
gi|3 : tATAC-AAGCTATATAAATGGGGA----TTTT-TT-----TTATGTCATTACAATTATATAGAGGATCTCTACCAA---AAAGAT-TGATTTCA-ACATT-----A-TTTT-TAA--CATGATA-------TACAATGTAATTCTAAATTA-ATCAAA------------GACAAAAGTAGTAAGAAGAA-TAAGATAAAATTATATTAAGCATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AAAAGTAACGA--------CAT-------TTTTTT-CCTGAAAA----CCAAGC--CT-TTAATATCACAAATAAAAGAATTATTATACCa
gi|4 : ttgtaagtatgtataacatggagcatataaaaaccacaaaaaaaaacaatgcatattATAC-GAGCTATATAAAAGGGCAG---TTTT-T--------ATGTCTTTACAGT-ATATAGAATATCTCCACCAG---GATGAT-TAATTTT--------------TTTT-T-T--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAACGTGACAAGAAGAA-TAAGATATAATTATATCAAATATAAATAATCAAGACAAACA-AA-AA--A--AAAAAGAACTTTTCATTTCATACATTTGGCTTTTCACAAT------GT--------AA--------A--------TGTTAAGAAATCTTTTCCCCGAAAA----CCCAGTGATA-TTAA-ACCACATATAAAAGAATTATTATTCCA-A-GTTATATTTCTACCAGGTATT-C---AAACAGTTTAACAAAACGCATTATAT--TAAAAAA
gi|5 : taATAC-AAGCTTTATAAATAGGGAGG--TTTT-TT-----TTATGTCATTACAATTATACAGAAGATCTCTACCAG---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATG-------TA-------GTTCCAAAATA-ATCAAAA-----------GACAAAAGTAGCAAGAAGAA-TAAGATATAATTAAATTAAGAATAAATGATAAAGACAAACA-AA-AATTATTACAGAAATCTTTTCAATTCATACATTTGACTTTTCACCATGTAAAAGT--------AA--------A--------GAT-------TTTTTTCCCAGAAAA----CCCAGC--CT-TTAATATCACATATAAAATAATTATTATACCA-AGTTT-TATTTCTGCCGGGTATTCTTAGAAAAAGTTTcaacaaggaaca
gi|6 : tattATAC-AAGCTATATAAATGGTGAGGG-TTTT-ATCAGGGTTATGTCATTACAATTATACCGAAGATCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAAAGTAGCAAGAAGAA-TAAGATATAATTATATTAAGAATAAATGATCAAGACAAACA-AA-AATTAATACAGAGATCTTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AAAGGTAACGA--------CAT-------TTTTTT-CCCGAAAA----CCCAGT--CT-TATATATTACAAATCAAAGAg
gi|7 : ggagcaaacaaaaatacataaaaaatgcatattATAC-AAGCTATATAAATGGGGAT---TTTT-TT-----TTATATCATTACAAT-------AAGATCTCAACCAG---GATGAT-TGATTTTCTACATT-----A-TTTTCTAT--CATGATA-------TA-------GTTCCAAATTA-ATCAAAA---------AA--CAAAAGTGGTAAGAAAAAATAAGATGTAATTATATT--------------------------A-AATTA------ATATTTTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AACAGGAAAGA--------CAT-------TTTTTTTATCGAACA----CCCAGC--CT-TTAATATCACAAATAAAATAATTACTAAACCA-AGTTT-TATTTCTACCAGGTATTCC---AATCGGTTTAACATTA
gi|8 : tgcatatcAGCTATATTAATGTGGAG---TTTT-TT-----A-ATGTCTTTACAATTTTACAGATGATCAACACCAG---GATGAT-CAATTTTA-ACATT-----G-TTTT-TTTTTCATGTTA-------TT-------GTTTTATGTT----CAAAA-----------GACAAAAATGGCAAGAAGAA-TAAGATATTATTATATCAAATATTAATGATTAAAACAAACA-AA-A-----TATA------TTGTCAATGCATATATTTAGTTTTT-ACAAT------GT--------AA--------A--------AGT-----------------AAAGAACCCCCCAGC--CTGTTAATATCACATATAAAAGGAATATTATa
gi|9 : aagATAA-GAGCTATATTAATTGGGAA---CTGT-TT-------ATGTCTTTACAGTTATACACAAGATCTCCACCAG---GATGAT-TAATTTTA-ACATT-----A-TTTC-TTT--CCTGATA--------A-------GTTCTAAATTATGCC---A---------AAGACAAAAGTGGCAAGAAGAC-AAAGATATAGTTATATTAGATATAAAAAATCAAGACAAACATAA-TATTGATACAGAGATTTTTTCAATTCATACATTTGGCTTTTCACCAT------ATAAAAGTAAAA--------A--------CAT-------TTTTTCCC
Alignments
lowQualScore : 1111 22222222222 44444444444444444444444444444444444 1111111 1 1 111 1 1 11 11 11 1
lowQualScore : 2 777 7777777777 2 0 333 1 1 55555 2 2 4444 8888888 8888888 2 99 88888888888 2 0 55 3 3 4 2 0 77777777777777777777777777777777777 1111111 5 4 8888 55 4 1 5 0 1 4 000 11 0 0 0 33 0 88 88 6 3 2 3 0 1 1 1 1
lowQualScore : . ... .......... . . ... . . ..... . . .... ....... ....... . .. ........... . . .. . . . . . ................................... ....... . . .... .. . . . . . . ... .. . . . .. . .. .. . . . . . . . . .
lowQualScore : 9 999 1111111111 9 4 333 9 9 33333 1 2 2222 1111111 7777777 9 11 11111111111 9 5 22 1 1 5 4 1 77777777777777777777777777777777777 8888888 1 8 5555 55 0 0 0 0 4 3 000 88 8 0 0 22 8 33 33 0 3 5 2 8 0 0 0 0
consensus : ATAC-AAGCTATATAAATGGGGAG---TTTT-TT-----TTATGTCNTTACAATTATACAGAAGATCTCCACCAG---GATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA---------AAGACAAAAGTGGCAAG-AAGAATAAGATATAATTATATTAAGNATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGGCTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACANATAAAAGAATTATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--AAAA--AAAAGGAAAAGA-GAAACAACAGGGAACACATTTGGCAGTTTGTTTGAACATATTTTATTTANTTGATGATTGGTCTAGGCNACAGTTATGAGTAACAGTTGACCNTGTTANTT
Reference ( family-3146 ) : ATAC-AAGCTATATAAATGGGGAG---TTTT-TT-----TTATGTCNTTACAATTATACAGAAGATCTCCACCAG---GATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA---------AAGACAAAAGTGGCAAG-AAGAATAAGATATAATTATATTAAGNATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGGCTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACANATAAAAGAATTATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--AAAA--AAGAGGAAAAGA-GAAACAACAGGGAACACATTTGGCAGTTTGTTTGAACATATTTTATTTANTTGATGATTGGTCTAGGCNACAGTTATGAGTAACAGTTGACCNTGTTANTT
gi|1 : ATAC-AAGCTATATAAATTGGGAG---TTTT-TT-----TTATGTCATTACAATTATATCGAAGATCTCCACCAA---AATGAT-TGATTTGA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATCAGAAGACAATCAGAAGACAAAAGTAGCAAG-AAGAAATAGATATAATTATATTAAGAATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATACAAACATTTGACTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACAAATAAAAGAATCATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AACCGGTTTAACAATACAAATTATATAAAAAAAAAATTAAAGTACA-AAAAATAGCAATAAAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--CAAA--AAAAGGAAAAGA-GAAACAACAGGGAACACATATGGCAGTTTGTTTAAACATATTTTATTTAATTGATGATTGGTCTATGCTACAGTTACGAGTAACAATTGACCCTGTTAATT
gi|10 : ATAC-AAGCTATATAAATGGGGGA---TTTT-TT-----TTAAGTC-TTACAATTATATAGAGGATCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-T-TCACATGATATACAATGTA-------GTTCTAAATTA-ATC---A---------AAGACAAAAGTAGTAAG-AAGCAT
gi|10 : aaaaacaaaaaacaatgcatatt--------AA--------G--------CAT-------TT-----CCTGAATA----CACGGC--CT-TTAATATCACAAATCAAAGAATTATTATACCA-A-ttcctgaatacacggcctttaatatcacaaatcaaagaattattataccaa
gi|11 : aaaaacaaaaaacaatgcatattatacaagctatataaatgggggattttttttaagtcttacaattatatagaggatctccaccaaaatgattgattttaacattattttttcacatgatatacaatgtagttctaaattaatcaaagacaaaagtagtaagTATTACAGAGATCTTTT-------------TGGCTTTTTGCCAAAAGA--GA--------AA--------C--------CAT-------CGTATTCCC-GAAAA----CCAAGC--CT-TTAATATCACATATAAAATATCTATTTTACCA-A-GTTATATTTCTACCATGTATT-C---AAACAGTTTAACAATACGAAATATATAAT-AACAAA-TACAGTACACAGAAAAAGCAAT--TAAAAAGGCAAAATATTTCTTTTGGAGATGTGA
gi|12 : TATGAAAATGAGGAG---TTCT-GT-----TT--GTCTTTACAACTATACAGAAGATATCCACTAG---GATGAA-TAATATTA-ACATT-----A-TTTT-T----TATGATA-------TA-------GTTCTATATTA-TTCAAAA---------CA--TAAAAATGGCAAG-AAGAATAAGATATAATTATATCAAACATAAATGATTAAAACAAACA-AA-AAAAATGATAGAGATCTTTTCAATACAT
gi|13 : C-AAGCTATATAAATGGGGAG---TTTT--T-----TTATGTCATTACAATTATATCGAAGGTCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATC--AA---------AAGACAAAGGTAGCAAG-AAGAATAAGATA-AATTATATTAAAAATAAATGATCACGACAAACA-AA-AA
gi|14 : C-AAGCTATATAAATGGGGAG---TTTT--T-----TTATGTCATTACAATTATATCGAAGGTCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATC--AA---------AAGACAAAGGTAGCAAG-AAGAATAAGATA-AATTATATTAAAAATAAATGATCACGACAAACA-AA-A
gi|15 : GAG---TTTT--T-----TTATGTCTTTACAGTTATAGAGAAGATCTCCACCAG---GATGAT-TAAGTTTA-ACATT-----T-TTTT-TTT--CATGATA-------TA-------GTTCTAATTTA-TTC--AA---------AAGACAAAAGTGGCAAT-AAGGATAAGATATAATTTAATTAATTATAAATGATCTAGACAAACA-AACAATT
gi|16 : aTGTTTCTTT-GGAAATGTTCCTCCGTTTTTCCAAGTGAGAAC--AAAAGTAGAAAGAGATGATGAAA-AACTGGGAACAAACTAGACAGT---AATGATCAGATTTGATTTATTGGATGTTTGGTCTGGAATACAAGTATGAGTTATAGGTTACTATGTTgata
gi|17 : ATAC-AAGCTTTATAAATAGGGAG---TTTT-TC-----TTATGTCATTACAATTATATAGAAGATCTCCACCAA---AATGAT-TGATTTTA-ACCTT-----A-TTTT-TGA--CATGATA-------TA-------GTTCTAAATTg
gi|18 : aaagcaatgcttattA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATTCTAGTTATATATTAAAAAAT-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGA
gi|19 : tgatatagttctaaattATAC-ACGCTATATAAATGGGGAGGTTTTTT-TT-----TTATGTCATAACAATTATATAGAAAATCGCCACCAA---AATGAT-TGATTTTA-ACATT-----ATTTTT-TAT--CATGATA-------T
gi|2 : ttATACCAAGCTATATTAATG---------TTT-TT-----TCAT--CATTACAATTATATAGAAGATCTCCACCAG---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGAAA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAAAGAAGCAAG-AAGAATAAAATATAATTATATTAAGAATAAATTATCAAGACAAACA-GA-AAATATTACAGAGATCTTTTCAATTCATATAGATGGCTTTTCACCAT------GT--------AA--------AAGTAACGACAT-------TTTTTCCCCTGAAAA----CCCAGC--CT-TTAATATCACATATAAAAGAATAATTATACCACG-TTT-TAGTTCTACCAGGTATCCC---AAACGG-TTAATAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAACAAT-AAAAAAAGGCAAAATATTTATTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAACAAAAAA--AAAAGGAAAAGA-GAAACAACAGGGAACCCATTTGGCAGTTTGTTTGCACATATTTCATTTAATTGATGATTGGTTTAGGCAACAATTATGAGTAACAGTTGACCCTGTTAG
gi|20 : tattAGCTTTATAATCGGTAAA---TTTT----------ATGTCTTTACAATTGTACAGCAAATCGCCACCA-------AAT-TGAT-----ACATTAAAACA-TTTT-TCT--CATG
gi|21 : atgcatatcataatAAACAACAAGGAACACATTTGGTAGTTTGTTTGAACATACTTTATTTATTTGATGATTGGTCTAGGCAACAGTTATGAGTAACAGTTGACCATGTTATTTttttaa
gi|22 : aAGCTATATAATTGGTGAG---GTTTGTT-----TTGTGACTTTAAAATTTTACATATTATTTCCACCAA---GATGGT-TAGTCCAA-ACATT-------TTTA-TTT--CATGt
gi|23 : taagATAG-GAGTTACACAATTGGGGAG---TATG-TT-----TAA-GACTTTACAATTACACAGAAGATCTCCACCAATTTGACAAT-TG--TCAA-ACATct
gi|24 : tCTATATAAATGGTGAG---TCTT-T--------ATGTCTTTATAGTTATACCGAAAATATCCACCAG---GATGATACAATTTTA-ACATT-----A-
gi|25 : GGGAG---TTAT-TT-----T-ATGTCTTTACAGTTATAAAGG-GATCTCCACAAG---GATAAT-TAATTTTA-ACA
gi|3 : tATAC-AAGCTATATAAATGGGGA----TTTT-TT-----TTATGTCATTACAATTATATAGAGGATCTCTACCAA---AAAGAT-TGATTTCA-ACATT-----A-TTTT-TAA--CATGATA-------TACAATGTAATTCTAAATTA-ATCAAA------------GACAAAAGTAGTAAG-AAGAATAAGATAAAATTATATTAAGCATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AAAAGTAACGA--------CAT-------TTTTTT-CCTGAAAA----CCAAGC--CT-TTAATATCACAAATAAAAGAATTATTATACCa
gi|4 : ttgtaagtatgtataacatggagcatataaaaaccacaaaaaaaaacaatgcatattATAC-GAGCTATATAAAAGGGCAG---TTTT-T--------ATGTCTTTACAGT-ATATAGAATATCTCCACCAG---GATGAT-TAATTTT--------------TTTT-T-T--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAACGTGACAAG-AAGAATAAGATATAATTATATCAAATATAAATAATCAAGACAAACA-AA-AA--A--AAAAAGAACTTTTCATTTCATACATTTGGCTTTTCACAAT------GT--------AA--------A--------TGTTAAGAAATCTTTTCCCCGAAAA----CCCAGTGATA-TTAA-ACCACATATAAAAGAATTATTATTCCA-A-GTTATATTTCTACCAGGTATT-C---AAACAGTTTAACAAAACGCATTATAT--TAAAAAA
gi|5 : taATAC-AAGCTTTATAAATAGGGAGG--TTTT-TT-----TTATGTCATTACAATTATACAGAAGATCTCTACCAG---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATG-------TA-------GTTCCAAAATA-ATCAAAA-----------GACAAAAGTAGCAAG-AAGAATAAGATATAATTAAATTAAGAATAAATGATAAAGACAAACA-AA-AATTATTACAGAAATCTTTTCAATTCATACATTTGACTTTTCACCATGTAAAAGT--------AA--------A--------GAT-------TTTTTTCCCAGAAAA----CCCAGC--CT-TTAATATCACATATAAAATAATTATTATACCA-AGTTT-TATTTCTGCCGGGTATTCTTAGAAAAAGTTTcaacaaggaaca
gi|6 : tattATAC-AAGCTATATAAATGGTGAGGG-TTTT-ATCAGGGTTATGTCATTACAATTATACCGAAGATCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAAAGTAGCAAG-AAGAATAAGATATAATTATATTAAGAATAAATGATCAAGACAAACA-AA-AATTAATACAGAGATCTTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AAAGGTAACGA--------CAT-------TTTTTT-CCCGAAAA----CCCAGT--CT-TATATATTACAAATCAAAGAg
gi|7 : ggagcaaacaaaaatacataaaaaatgcatattATAC-AAGCTATATAAATGGGGAT---TTTT-TT-----TTATATCATTACAAT-------AAGATCTCAACCAG---GATGAT-TGATTTTCTACATT-----A-TTTTCTAT--CATGATA-------TA-------GTTCCAAATTA-ATCAAAA---------A--ACAAAAGTGGTAAGAAAAAATAAGATGTAATTATATTAA---------ATTAA---------------TATT---------TTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AACAGGAAAGA--------CAT-------TTTTTTTATCGAACA----CCCAGC--CT-TTAATATCACAAATAAAATAATTACTAAACCA-AGTTT-TATTTCTACCAGGTATTCC---AATCGGTTTAACATTA
gi|8 : tgcatatcAGCTATATTAATGTGGAG---TTTT-TT-----A-ATGTCTTTACAATTTTACAGATGATCAACACCAG---GATGAT-CAATTTTA-ACATT-----G-TTTT-TTTTTCATGTTA-------TT-------GTTTTATGTT----CAAAA-----------GACAAAAATGGCAAG-AAGAATAAGATATTATTATATCAAATATTAATGATTAAAACAAACA-AA-A-----TATA------TTGTCAATGCATATATTTAGTTTTT-ACAAT------GT--------AA--------A--------AGT-----------------AAAGAACCCCCCAGC--CTGTTAATATCACATATAAAAGGAATATTATa
gi|9 : aagATAA-GAGCTATATTAATTGGGAA---CTGT-TT-------ATGTCTTTACAGTTATACACAAGATCTCCACCAG---GATGAT-TAATTTTA-ACATT-----A-TTTC-TTT--CCTGATA--------A-------GTTCTAAATTATGCC---A---------AAGACAAAAGTGGCAAG-AAGACAAAGATATAGTTATATTAGATATAAAAAATCAAGACAAACATAA-TATTGATACAGAGATTTTTTCAATTCATACATTTGGCTTTTCACCAT------ATAAAAGTAAAA--------A--------CAT-------TTTTTCCC
Alignments
lowQualScore : 1111 22222222222 44444444444444444444444444444444444 1111111 1 1 111 1 1 11 11 11 1
lowQualScore : 2 777 7777777777 2 0 333 1 1 55555 2 2 4444 8888888 8888888 2 99 88888888888 2 0 55 3 3 4 2 0 77777777777777777777777777777777777 1111111 5 4 8888 55 4 1 5 0 1 4 000 11 0 0 0 33 0 88 88 3 2 3 0 1 1 1 1
lowQualScore : . ... .......... . . ... . . ..... . . .... ....... ....... . .. ........... . . .. . . . . . ................................... ....... . . .... .. . . . . . . ... .. . . . .. . .. .. . . . . . . . .
lowQualScore : 9 999 1111111111 9 4 333 9 9 33333 1 2 2222 1111111 7777777 9 11 11111111111 9 5 22 1 1 5 4 1 77777777777777777777777777777777777 8888888 1 8 5555 55 0 0 0 0 4 3 000 88 8 0 0 22 8 33 33 3 5 2 8 0 0 0 0
consensus : ATAC-AAGCTATATAAATGGGGAG---TTTT-TT-----TTATGTCNTTACAATTATACAGAAGATCTCCACCAG---GATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA---------AAGACAAAAGTGGCAAG-AAGAATAAGATATAATTATATTAAGNATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGGCTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACANATAAAAGAATTATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--AAAA--AAAAGGAAAAGA-GAAACAACAGGGAACACATTTGGCAGTTTGTTTGAACATATTTTATTTANTTGATGATTGGTCTAGGCNACAGTTATGAGTAACAGTTGACCNTGTTANTT
Reference ( family-3146 ) : ATAC-AAGCTATATAAATGGGGAG---TTTT-TT-----TTATGTCNTTACAATTATACAGAAGATCTCCACCAG---GATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA---------AAGACAAAAGTGGCAAG-AAGAATAAGATATAATTATATTAAGNATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGGCTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACANATAAAAGAATTATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--AAAA--AAAAGGAAAAGA-GAAACAACAGGGAACACATTTGGCAGTTTGTTTGAACATATTTTATTTANTTGATGATTGGTCTAGGCNACAGTTATGAGTAACAGTTGACCNTGTTANTT
gi|1 : ATAC-AAGCTATATAAATTGGGAG---TTTT-TT-----TTATGTCATTACAATTATATCGAAGATCTCCACCAA---AATGAT-TGATTTGA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATCAGAAGACAATCAGAAGACAAAAGTAGCAAG-AAGAAATAGATATAATTATATTAAGAATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATACAAACATTTGACTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACAAATAAAAGAATCATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AACCGGTTTAACAATACAAATTATATAAAAAAAAAATTAAAGTACA-AAAAATAGCAATAAAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--CAAA--AAAAGGAAAAGA-GAAACAACAGGGAACACATATGGCAGTTTGTTTAAACATATTTTATTTAATTGATGATTGGTCTATGCTACAGTTACGAGTAACAATTGACCCTGTTAATT
gi|10 : ATAC-AAGCTATATAAATGGGGGA---TTTT-TT-----TTAAGTC-TTACAATTATATAGAGGATCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-T-TCACATGATATACAATGTA-------GTTCTAAATTA-ATC---A---------AAGACAAAAGTAGTAAG-AAGCAT
gi|10 : aaaaacaaaaaacaatgcatatt--------AA--------G--------CAT-------TT-----CCTGAATA----CACGGC--CT-TTAATATCACAAATCAAAGAATTATTATACCA-A-ttcctgaatacacggcctttaatatcacaaatcaaagaattattataccaa
gi|11 : aaaaacaaaaaacaatgcatattatacaagctatataaatgggggattttttttaagtcttacaattatatagaggatctccaccaaaatgattgattttaacattattttttcacatgatatacaatgtagttctaaattaatcaaagacaaaagtagtaagTATTACAGAGATCTTTT-------------TGGCTTTTTGCCAAAAGA--GA--------AA--------C--------CAT-------CGTATTCCC-GAAAA----CCAAGC--CT-TTAATATCACATATAAAATATCTATTTTACCA-A-GTTATATTTCTACCATGTATT-C---AAACAGTTTAACAATACGAAATATATAAT-AACAAA-TACAGTACACAGAAAAAGCAAT--TAAAAAGGCAAAATATTTCTTTTGGAGATGTGA
gi|12 : TATGAAAATGAGGAG---TTCT-GT-----TT--GTCTTTACAACTATACAGAAGATATCCACTAG---GATGAA-TAATATTA-ACATT-----A-TTTT-T----TATGATA-------TA-------GTTCTATATTA-TTCAAAA---------CA--TAAAAATGGCAAG-AAGAATAAGATATAATTATATCAAACATAAATGATTAAAACAAACA-AA-AAAAATGATAGAGATCTTTTCAATACAT
gi|13 : C-AAGCTATATAAATGGGGAG---TTTT--T-----TTATGTCATTACAATTATATCGAAGGTCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATC--AA---------AAGACAAAGGTAGCAAG-AAGAATAAGATA-AATTATATTAAAAATAAATGATCACGACAAACA-AA-AA
gi|14 : C-AAGCTATATAAATGGGGAG---TTTT--T-----TTATGTCATTACAATTATATCGAAGGTCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATC--AA---------AAGACAAAGGTAGCAAG-AAGAATAAGATA-AATTATATTAAAAATAAATGATCACGACAAACA-AA-A
gi|15 : GAG---TTTT--T-----TTATGTCTTTACAGTTATAGAGAAGATCTCCACCAG---GATGAT-TAAGTTTA-ACATT-----T-TTTT-TTT--CATGATA-------TA-------GTTCTAATTTA-TTC--AA---------AAGACAAAAGTGGCAAT-AAGGATAAGATATAATTTAATTAATTATAAATGATCTAGACAAACA-AACAATT
gi|16 : aTGTTTCTTT-GGAAATGTTCCTCCGTTTTTCCAAGTGAGAAC--AAAAGTAGAAAGAGATGATGAAA-AACTGGGAACAAACTAGACAGT---AATGATCAGATTTGATTTATTGGATGTTTGGTCTGGAATACAAGTATGAGTTATAGGTTACTATGTTgata
gi|17 : ATAC-AAGCTTTATAAATAGGGAG---TTTT-TC-----TTATGTCATTACAATTATATAGAAGATCTCCACCAA---AATGAT-TGATTTTA-ACCTT-----A-TTTT-TGA--CATGATA-------TA-------GTTCTAAATTg
gi|18 : aaagcaatgcttattA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATTCTAGTTATATATTAAAAAAT-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGA
gi|19 : tgatatagttctaaattATAC-ACGCTATATAAATGGGGAGGTTTTTT-TT-----TTATGTCATAACAATTATATAGAAAATCGCCACCAA---AATGAT-TGATTTTA-ACATT-----ATTTTT-TAT--CATGATA-------T
gi|2 : ttATACCAAGCTATATTAATG---------TTT-TT-----TCAT--CATTACAATTATATAGAAGATCTCCACCAG---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGAAA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAAAGAAGCAAG-AAGAATAAAATATAATTATATTAAGAATAAATTATCAAGACAAACA-GA-AAATATTACAGAGATCTTTTCAATTCATATAGATGGCTTTTCACCAT------GT--------AA--------AAGTAACGACAT-------TTTTTCCCCTGAAAA----CCCAGC--CT-TTAATATCACATATAAAAGAATAATTATACCACG-TTT-TAGTTCTACCAGGTATCCC---AAACGG-TTAATAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAACAAT-AAAAAAAGGCAAAATATTTATTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAACAAAAAA--AAAAGGAAAAGA-GAAACAACAGGGAACCCATTTGGCAGTTTGTTTGCACATATTTCATTTAATTGATGATTGGTTTAGGCAACAATTATGAGTAACAGTTGACCCTGTTAG
gi|20 : tattAGCTTTATAATCGGTAAA---TTTT----------ATGTCTTTACAATTGTACAGCAAATCGCCACCA-------AAT-TGAT-----ACATTAAAACA-TTTT-TCT--CATG
gi|21 : atgcatatcataatAAACAACAAGGAACACATTTGGTAGTTTGTTTGAACATACTTTATTTATTTGATGATTGGTCTAGGCAACAGTTATGAGTAACAGTTGACCATGTTATTTttttaa
gi|22 : aAGCTATATAATTGGTGAG---GTTTGTT-----TTGTGACTTTAAAATTTTACATATTATTTCCACCAA---GATGGT-TAGTCCAA-ACATT-------TTTA-TTT--CATGt
gi|23 : taagATAG-GAGTTACACAATTGGGGAG---TATG-TT-----TAA-GACTTTACAATTACACAGAAGATCTCCACCAATTTGACAAT-TG--TCAA-ACATct
gi|24 : tCTATATAAATGGTGAG---TCTT-T--------ATGTCTTTATAGTTATACCGAAAATATCCACCAG---GATGATACAATTTTA-ACATT-----A-
gi|25 : GGGAG---TTAT-TT-----T-ATGTCTTTACAGTTATAAAGG-GATCTCCACAAG---GATAAT-TAATTTTA-ACA
gi|3 : tATAC-AAGCTATATAAATGGGGA----TTTT-TT-----TTATGTCATTACAATTATATAGAGGATCTCTACCAA---AAAGAT-TGATTTCA-ACATT-----A-TTTT-TAA--CATGATA-------TACAATGTAATTCTAAATTA-ATCAAA------------GACAAAAGTAGTAAG-AAGAATAAGATAAAATTATATTAAGCATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AAAAGTAACGA--------CAT-------TTTTTT-CCTGAAAA----CCAAGC--CT-TTAATATCACAAATAAAAGAATTATTATACCa
gi|4 : ttgtaagtatgtataacatggagcatataaaaaccacaaaaaaaaacaatgcatattATAC-GAGCTATATAAAAGGGCAG---TTTT-T--------ATGTCTTTACAGT-ATATAGAATATCTCCACCAG---GATGAT-TAATTTT--------------TTTT-T-T--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAACGTGACAAG-AAGAATAAGATATAATTATATCAAATATAAATAATCAAGACAAACA-AA-AA--A--AAAAAGAACTTTTCATTTCATACATTTGGCTTTTCACAAT------GT--------AA--------A--------TGTTAAGAAATCTTTTCCCCGAAAA----CCCAGTGATA-TTAA-ACCACATATAAAAGAATTATTATTCCA-A-GTTATATTTCTACCAGGTATT-C---AAACAGTTTAACAAAACGCATTATAT--TAAAAAA
gi|5 : taATAC-AAGCTTTATAAATAGGGAGG--TTTT-TT-----TTATGTCATTACAATTATACAGAAGATCTCTACCAG---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATG-------TA-------GTTCCAAAATA-ATCAAAA-----------GACAAAAGTAGCAAG-AAGAATAAGATATAATTAAATTAAGAATAAATGATAAAGACAAACA-AA-AATTATTACAGAAATCTTTTCAATTCATACATTTGACTTTTCACCATGTAAAAGT--------AA--------A--------GAT-------TTTTTTCCCAGAAAA----CCCAGC--CT-TTAATATCACATATAAAATAATTATTATACCA-AGTTT-TATTTCTGCCGGGTATTCTTAGAAAAAGTTTcaacaaggaaca
gi|6 : tattATAC-AAGCTATATAAATGGTGAGGG-TTTT-ATCAGGGTTATGTCATTACAATTATACCGAAGATCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAAAGTAGCAAG-AAGAATAAGATATAATTATATTAAGAATAAATGATCAAGACAAACA-AA-AATTAATACAGAGATCTTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AAAGGTAACGA--------CAT-------TTTTTT-CCCGAAAA----CCCAGT--CT-TATATATTACAAATCAAAGAg
gi|7 : ggagcaaacaaaaatacataaaaaatgcatattATAC-AAGCTATATAAATGGGGAT---TTTT-TT-----TTATATCATTACAAT-------AAGATCTCAACCAG---GATGAT-TGATTTTCTACATT-----A-TTTTCTAT--CATGATA-------TA-------GTTCCAAATTA-ATCAAAA---------A--ACAAAAGTGGTAAGAAAAAATAAGATGTAATTATATTAA---------ATTAA---------------TATT---------TTTTCAATTCATACATTTGACTTTTCACCAT------GT--------AACAGGAAAGA--------CAT-------TTTTTTTATCGAACA----CCCAGC--CT-TTAATATCACAAATAAAATAATTACTAAACCA-AGTTT-TATTTCTACCAGGTATTCC---AATCGGTTTAACATTA
gi|8 : tgcatatcAGCTATATTAATGTGGAG---TTTT-TT-----A-ATGTCTTTACAATTTTACAGATGATCAACACCAG---GATGAT-CAATTTTA-ACATT-----G-TTTT-TTTTTCATGTTA-------TT-------GTTTTATGTT----CAAAA-----------GACAAAAATGGCAAG-AAGAATAAGATATTATTATATCAAATATTAATGATTAAAACAAACA-AA-A-----TATA------TTGTCAATGCATATATTTAGTTTTT-ACAAT------GT--------AA--------A--------AGT-----------------AAAGAACCCCCCAGC--CTGTTAATATCACATATAAAAGGAATATTATa
gi|9 : aagATAA-GAGCTATATTAATTGGGAA---CTGT-TT-------ATGTCTTTACAGTTATACACAAGATCTCCACCAG---GATGAT-TAATTTTA-ACATT-----A-TTTC-TTT--CCTGATA--------A-------GTTCTAAATTATGCC---A---------AAGACAAAAGTGGCAAG-AAGACAAAGATATAGTTATATTAGATATAAAAAATCAAGACAAACATAA-TATTGATACAGAGATTTTTTCAATTCATACATTTGGCTTTTCACCAT------ATAAAAGTAAAA--------A--------CAT-------TTTTTCCC
blockSeqs : C GTT ATCAGGGTT T TTT A T AAAAC T C TTTT TACAATG CAATGTA T AA AA A AC T C A T GTAAAAGTAACGA TAAGAAA C T ACCC GA G A C G A C TAG AA . C A AA GT T C T T T A G
blockSeqs : . GG GTTTT A . . . . . . TCA . . . AA CA . AA . . T T GTAAAAGTAACGA . C T . . . T . G A C . AT . . A . . . C T A A C T
blockSeqs : . G TTTT A . . . . . . AA . . . AA AA . AA . . A T GTAAAGGTAACGA . C T . . . T . . . C . AA . . . . . T A A
blockSeqs : . . GTTT T . . . . . . AA . . . AA AA . TT . . T T GTAACAGGAAAGA . C C . . . A . . . C . .
blockSeqs : . . TCTT A . . . . . . TT . . . AA AA . GA . . T T ATAAAAGTAAAAA . T A . . . T . . . . .
blockSeqs : . . TTTT A . . . . . . GA . . . AA AA . GC . . T A GTAAAAGTAAA . C C . . . T . . . . .
blockSeqs : . . TTTC A . . . . . . AT . . . AA A . AT . . T T AAGAGAAAC . . C . . . A . .
blockSeqs : . . TTTA T . . . . . . AT . . . AA . . GA . . . A GTAAA . . . . . . A
blockSeqs : . . TTTT T . . . . . . CT . . . . . . GA . . . . GTAAA . . . . . . T
blockSeqs : . . TTTT T . . . . . . TT . . . . . . AT . . . . . .
blockSeqs : . . TTTT T . . . . . . AA . . . . . . AT . .
blockSeqs : . . TTT T . . . . . . AT . . . . . . . . .
blockSeqs : . . TTT A . . . . . . AA . . . . . .
blockSeqs : . TTT T . . . . . . AT . .
blockSeqs : . TTT A . . . . . . TT .
blockSeqs : . TTA A . . . . . . T
blockSeqs : . TT A . . . . . . .
blockSeqs : . T T . . . . .
blockSeqs : . T T . . .
blockSeqs : . . . . . .
blockSeqCons : A********** GTAAAAGTAACGA**********************
originalCons : ATAC-AAGCTATATAAATGGGGAG---TTTT-TT-----TTATGTCNTTACAATTATACAGAAGATCTCCACCAG---GATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA---------AAGACAAAAGTGGCAAG-AAGAATAAGATATAATTATATTAAGNATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGGCTTTTCACCAT------GT--------AA--------A--------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACANATAAAAGAATTATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--AAAA--AAAAGGAAAAGA-GAAACAACAGGGAACACATTTGGCAGTTTGTTTGAACATATTTTATTTANTTGATGATTGGTCTAGGCNACAGTTATGAGTAACAGTTGACCNTGTTANTT
finalCons : ATAC-AAGCTATATAAATGGGGAG---TTTT-TT-----TTATGTCNTTACAATTATACAGAAGATCTCCACCAG---GATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATA-------TA-------GTTCTAAATTA-ATCAAAAA----------GACAAAAGTGGCAAG-AAGAATAAGATATAATTATATTAAGNATAAATGATCAAGACAAACA-AA-AATTATTACAGAGATCTTTTCAATTCATACATTTGGCTTTTCACCATGTAAAAGTAACGA----------------------CAT-------TTTTTTCCCCGAAAA----CCCAGC--CT-TTAATATCACANATAAAAGAATTATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATACGAATTATATAATAAAAAAA-TACAGTACA-AAAAATAGCAAT-AAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--AAAA--AAAAGGAAAAGA-GAAACAACAGGGAACACATTTGGCAGTTTGTTTGAACATATTTTATTTANTTGATGATTGGTCTAGGCNACAGTTATGAGTAACAGTTGACCNTGTTANTT
Alignments
lowQualScore : 1111 22222222222 1 1 111 1 1 1 11 11 1
lowQualScore : 2 777 7777777777 2 0 333 1 1 55555 2 2 4444 8888888 8888888 2 5 66666666666 2 0 55 3 444 2 0 3 55 99999 2 7 55 4 1 5 0 1 4 000 11 0 0 0 3 0 0 88 88 3 2 3 0 1 1 1 1
lowQualScore : . ... .......... . . ... . . ..... . . .... ....... ....... . . ........... . . .. . ... . . . .. ..... . . .. . . . . . . ... .. . . . . . . .. .. . . . . . . . .
lowQualScore : 9 999 1111111111 9 4 333 9 9 33333 1 2 2222 1111111 7777777 9 0 11111111111 9 5 22 1 777 4 1 6 00 00000 8 3 55 0 0 0 0 4 3 000 88 8 0 0 2 0 8 33 33 3 5 2 8 0 0 0 0
consensus : ATAC-AAGCTATATAAATGGGGAG---TTTT-TT-----TTATGTCNTTACAATTATACAGAAGATCTCCACCAG---GATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA----------AGACAAAAGTGGCAAG-AAGAATAAGATATAATTATATTAAGNATAAATGATCAAGACAAACAAA-A-ATTATTACAGAGATCTTTTCAATTCATACATTTGGCTTTTCACCATGTAAA-AGTA--AAGA--CATTTTTTTCCCCGAAAACCCAGC--CT-TTAATATCACANATAAAAGAATTATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATACGAATTATATAATAAAAAAAT-ACAGTACA-AAAAATAGCAATAAAA-AAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--AAAA--AAAAGGAAAAGA-GAAACAACAGGGAACACATTTGGCAGTTTGTTTGAACATATTTTATTTANTTGATGATTGGTCTAGGCNACAGTTATGAGTAACAGTTGACCNTGTTANTT
Reference ( family-3146 ) : ATAC-AAGCTATATAAATGGGGAG---TTTT-TT-----TTATGTCNTTACAATTATACAGAAGATCTCCACCAG---GATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA----------AGACAAAAGTGGCAAG-AAGAATAAGATATAATTATATTAAGNATAAATGATCAAGACAAACAAA-A-ATTATTACAGAGATCTTTTCAATTCATACATTTGGCTTTTCACCATGTAAA-AGTA--ACGA--CATTTTTTTCCCCGAAAACCCAGC--CT-TTAATATCACANATAAAAGAATTATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATACGAATTATATAATAAAAAAAT-ACAGTACA-AAAAATAGCAATAAAA-AAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--AAAA--AAAAGGAAAAGA-GAAACAACAGGGAACACATTTGGCAGTTTGTTTGAACATATTTTATTTANTTGATGATTGGTCTAGGCNACAGTTATGAGTAACAGTTGACCNTGTTANTT
gi|1 : ATAC-AAGCTATATAAATTGGGAG---TTTT-TT-----TTATGTCATTACAATTATATCGAAGATCTCCACCAA---AATGAT-TGATTTGA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATCAGAAGACAATCAGAAGACAAAAGTAGCAAG-AAGAAATAGATATAATTATATTAAGAATAAATGATCAAGACAAACAAA-A-ATTATTACAGAGATCTTTTCAATACAAACATTTGACTTTTCACCATGTAAA-------------CATTTTTTTCCCCGAAAACCCAGC--CT-TTAATATCACAAATAAAAGAATCATTATACCA-A-TTT-TATTTCTACCAGGTATTCC---AACCGGTTTAACAATACAAATTATATAAAAAAAAAATTAAAGTACA-AAAAATAGCAATAAAAAAAAGGCAAAATATTTCTTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAAC--CAAA--AAAAGGAAAAGA-GAAACAACAGGGAACACATATGGCAGTTTGTTTAAACATATTTTATTTAATTGATGATTGGTCTATGCTACAGTTACGAGTAACAATTGACCCTGTTAATT
gi|10 : ATAC-AAGCTATATAAATGGGGGA---TTTT-TT-----TTAAGTC-TTACAATTATATAGAGGATCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-T-TCACATGATATACAATGTA-------GTTCTAAATTA-ATC--AA----------AGACAAAAGTAGTAAG-AAGCAT
gi|10 : aaaaacaaaaaacaatgcatattAAA-AGTAGTAAGAAGCATTT-----CCTGAATACACGGC--CT-TTAATATCACAAATCAAAGAATTATTATACCA-A-ttcctgaatacacggcctttaatatcacaaatcaaagaattattataccaa
gi|11 : aaaaacaaaaaacaatgcatattatacaagctatataaatgggggattttttttaagtcttacaattatatagaggatctccaccaaaatgattgattttaacattattttttcacatgatatacaatgtagttctaaattaatcaaagacTATTACAGAGATCTTTT-------------TGGCTTTTTGCCA---AAAGAGAA--AC----CATCGTATTCCC-GAAAACCAAGC--CT-TTAATATCACATATAAAATATCTATTTTACCA-A-GTTATATTTCTACCATGTATT-C---AAACAGTTTAACAATACGAAATATATAAT-AACAAAT-ACAGTACACAGAAAAAGCAAT-TAA-AAAGGCAAAATATTTCTTTTGGAGATGTGA
gi|12 : TATGAAAATGAGGAG---TTCT-GT-----TT--GTCTTTACAACTATACAGAAGATATCCACTAG---GATGAA-TAATATTA-ACATT-----A-TTTT-T----TATGATA-------TA-------GTTCTATATTA-TTCAAAA----------C-ATAAAAATGGCAAG-AAGAATAAGATATAATTATATCAAACATAAATGATTAAAACAAACAAA-A-AAAATGATAGAGATCTTTTCAATACAT
gi|13 : C-AAGCTATATAAATGGGGAG---TTTT--T-----TTATGTCATTACAATTATATCGAAGGTCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATC-AAA----------AGACAAAGGTAGCAAG-AAGAATAAGATA-AATTATATTAAAAATAAATGATCACGACAAACAAA-A-A
gi|14 : C-AAGCTATATAAATGGGGAG---TTTT--T-----TTATGTCATTACAATTATATCGAAGGTCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATC-AAA----------AGACAAAGGTAGCAAG-AAGAATAAGATA-AATTATATTAAAAATAAATGATCACGACAAACAAA-A-
gi|15 : GAG---TTTT--T-----TTATGTCTTTACAGTTATAGAGAAGATCTCCACCAG---GATGAT-TAAGTTTA-ACATT-----T-TTTT-TTT--CATGATA-------TA-------GTTCTAATTTA-TTC-AAA----------AGACAAAAGTGGCAAT-AAGGATAAGATATAATTTAATTAATTATAAATGATCTAGACAAACAAACA-ATT
gi|16 : aTGTTTCTTT-GGAAATGTTCCTCCGTTTTTCCAAGTGAGAAC--AAAAGTAGAAAGAGATGATGAAA-AACTGGGAACAAACTAGACAGT---AATGATCAGATTTGATTTATTGGATGTTTGGTCTGGAATACAAGTATGAGTTATAGGTTACTATGTTgata
gi|17 : ATAC-AAGCTTTATAAATAGGGAG---TTTT-TC-----TTATGTCATTACAATTATATAGAAGATCTCCACCAA---AATGAT-TGATTTTA-ACCTT-----A-TTTT-TGA--CATGATA-------TA-------GTTCTAAATTg
gi|18 : aaagcaatgcttattA-A-TTT-TATTTCTACCAGGTATTCC---AAACGGTTTAACAATTCTAGTTATATATTAAAAAATT-ACAGTACA-AAAAATAGCAATAAAA-AAAGGCAAAATATTTCTTTTGGA
gi|19 : tgatatagttctaaattATAC-ACGCTATATAAATGGGGAGGTTTTTT-TT-----TTATGTCATAACAATTATATAGAAAATCGCCACCAA---AATGAT-TGATTTTA-ACATT-----ATTTTT-TAT--CATGATA-------T
gi|2 : ttATACCAAGCTATATTAATG---------TTT-TT-----TCAT--CATTACAATTATATAGAAGATCTCCACCAG---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGAAA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAAAGAAGCAAG-AAGAATAAAATATAATTATATTAAGAATAAATTATCAAGACAAACAGA-A-AATATTACAGAGATCTTTTCAATTCATATAGATGGCTTTTCACCATGTAAA-AGTA--ACGA--CATTTTTTCCCCTGAAAACCCAGC--CT-TTAATATCACATATAAAAGAATAATTATACCACG-TTT-TAGTTCTACCAGGTATCCC---AAACGG-TTAATAATACGAATTATATAATAAAAAAAT-ACAGTACA-AAAAATAACAATAAAA-AAAGGCAAAATATTTATTTTGGAGATGTGACTTCGCTTTTTCAAGTGAAAACAAAAAA--AAAAGGAAAAGA-GAAACAACAGGGAACCCATTTGGCAGTTTGTTTGCACATATTTCATTTAATTGATGATTGGTTTAGGCAACAATTATGAGTAACAGTTGACCCTGTTAG
gi|20 : tattAGCTTTATAATCGGTAAA---TTTT----------ATGTCTTTACAATTGTACAGCAAATCGCCACCA-------AAT-TGAT-----ACATTAAAACA-TTTT-TCT--CATG
gi|21 : atgcatatcataatAAACAACAAGGAACACATTTGGTAGTTTGTTTGAACATACTTTATTTATTTGATGATTGGTCTAGGCAACAGTTATGAGTAACAGTTGACCATGTTATTTttttaa
gi|22 : aAGCTATATAATTGGTGAG---GTTTGTT-----TTGTGACTTTAAAATTTTACATATTATTTCCACCAA---GATGGT-TAGTCCAA-ACATT-------TTTA-TTT--CATGt
gi|23 : taagATAG-GAGTTACACAATTGGGGAG---TATG-TT-----TAA-GACTTTACAATTACACAGAAGATCTCCACCAATTTGACAAT-TG--TCAA-ACATct
gi|24 : tCTATATAAATGGTGAG---TCTT-T--------ATGTCTTTATAGTTATACCGAAAATATCCACCAG---GATGATACAATTTTA-ACATT-----A-
gi|25 : GGGAG---TTAT-TT-----T-ATGTCTTTACAGTTATAAAGG-GATCTCCACAAG---GATAAT-TAATTTTA-ACA
gi|3 : tATAC-AAGCTATATAAATGGGGA----TTTT-TT-----TTATGTCATTACAATTATATAGAGGATCTCTACCAA---AAAGAT-TGATTTCA-ACATT-----A-TTTT-TAA--CATGATA-------TACAATGTAATTCTAAATTA-ATCAAA------------GACAAAAGTAGTAAG-AAGAATAAGATAAAATTATATTAAGCATAAATGATCAAGACAAACAAA-A-ATTATTACAGAGATCTTTTCAATTCATACATTTGACTTTTCACCATGTAAA-AGTA--ACGA--CATTTTTTT-CCTGAAAACCAAGC--CT-TTAATATCACAAATAAAAGAATTATTATACCa
gi|4 : ttgtaagtatgtataacatggagcatataaaaaccacaaaaaaaaacaatgcatattATAC-GAGCTATATAAAAGGGCAG---TTTT-T--------ATGTCTTTACAGT-ATATAGAATATCTCCACCAG---GATGAT-TAATTTT--------------TTTT-T-T--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAACGTGACAAG-AAGAATAAGATATAATTATATCAAATATAAATAATCAAGACAAACAAA-A-A--A--AAAAAGAACTTTTCATTTCATACATTTGGCTTTTCACAATGTAAA-TGTT--AAGA--AA-TCTTTTCCCCGAAAACCCAGTGATA-TTAA-ACCACATATAAAAGAATTATTATTCCA-A-GTTATATTTCTACCAGGTATT-C---AAACAGTTTAACAAAACGCATTATAT--TAAAAAA
gi|5 : taATAC-AAGCTTTATAAATAGGGAGG--TTTT-TT-----TTATGTCATTACAATTATACAGAAGATCTCTACCAG---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAT--CATGATG-------TA-------GTTCCAAAATA-ATCAAAA-----------GACAAAAGTAGCAAG-AAGAATAAGATATAATTAAATTAAGAATAAATGATAAAGACAAACAAA-A-ATTATTACAGAAATCTTTTCAATTCATACATTTGACTTTTCACCATGTAAA-AGTA--AAG----ATTTTTTTCCCAGAAAACCCAGC--CT-TTAATATCACATATAAAATAATTATTATACCA-AGTTT-TATTTCTGCCGGGTATTCTTAGAAAAAGTTTcaacaaggaaca
gi|6 : tattATAC-AAGCTATATAAATGGTGAGGG-TTTT-ATCAGGGTTATGTCATTACAATTATACCGAAGATCTCCACCAA---AATGAT-TGATTTTA-ACATT-----A-TTTT-TAA--CATGATA-------TA-------GTTCTAAATTA-ATCAAAA-----------GACAAAAGTAGCAAG-AAGAATAAGATATAATTATATTAAGAATAAATGATCAAGACAAACAAA-A-ATTAATACAGAGATCTTTTCAATTCATACATTTGACTTTTCACCATGTAAA-GGTA--ACGA--CATTTTTTT-CCCGAAAACCCAGT--CT-TATATATTACAAATCAAAGAg
gi|7 : ggagcaaacaaaaatacataaaaaatgcatattATAC-AAGCTATATAAATGGGGAT---TTTT-TT-----TTATATCATTACAAT-------AAGATCTCAACCAG---GATGAT-TGATTTTCTACATT-----A-TTTTCTAT--CATGATA-------TA-------GTTCCAAATTA-ATCAAAA----------A-ACAAAAGTGGTAAGAAAAAATAAGATGTAATTATATTAA---------ATTAA---------------TATT---------TTTTCAATTCATACATTTGACTTTTCACCATGTAAC-AGGA--AAGA--CATTTTTTTTATCGAACACCCAGC--CT-TTAATATCACAAATAAAATAATTACTAAACCA-AGTTT-TATTTCTACCAGGTATTCC---AATCGGTTTAACATTA
gi|8 : tgcatatcAGCTATATTAATGTGGAG---TTTT-TT-----A-ATGTCTTTACAATTTTACAGATGATCAACACCAG---GATGAT-CAATTTTA-ACATT-----G-TTTT-TTTTTCATGTTA-------TT-------GTTTTATGTT----CAAAA-----------GACAAAAATGGCAAG-AAGAATAAGATATTATTATATCAAATATTAATGATTAAAACAAACAAA-A------TATA------TTGTCAATGCATATATTTAGTTTTT-ACAATGTAAA-AGTA--AAGA---A-------CCC------CCCAGC--CTGTTAATATCACATATAAAAGGAATATTATa
gi|9 : aagATAA-GAGCTATATTAATTGGGAA---CTGT-TT-------ATGTCTTTACAGTTATACACAAGATCTCCACCAG---GATGAT-TAATTTTA-ACATT-----A-TTTC-TTT--CCTGATA--------A-------GTTCTAAATTATGCCAAA------------GACAAAAGTGGCAAG-AAGACAAAGATATAGTTATATTAGATATAAAAAATCAAGACAAACATA-ATATTGATACAGAGATTTTTTCAATTCATACATTTGGCTTTTCACCATATAAA-AGTA--AAAA--CATTTTTTCCC