lowQualScore : 1111111 2222222222222 1111111111111111111111111
lowQualScore : 4 1 1 3333333 22222 8888 777 555555555555555555555555 1 11 11111 1 1 1111111111111 11 11 1 1 1 111 22 1 1 1 111 1 11 11 1 2222222222 222 222222 1 1 11 11 11 1 1 1 33 1 1 33 1 1 2222 222 22 1 1 11 1 33 1 1111 9999999999 22222 1 22222 222222 1 0000000000000000000000000 11111111 111111 333333333333 1 22222 1 8888 11 11 1
lowQualScore : 6 0 6 7 5 6 0000000 77777 5555 000 4 4 2 6 999999999999999999999999 4 4 6 88 1 6 88888 5 2 6 6 6 7 1111111111111 22 22 5 5 7 888 6 33 5 6 5 6 6 4 7 000 6 2 3 3 333 0 88 2 0 44 3 3333333333 2 777 111111 5 4 3 0 0 3 33 2 11 1 2 2 2 99 0 0 5 1 2 2 0 22 5 6 6 7 6 00 6 2 2 44 0 5 1111 1 6 1 3 888 11 6 1 1 6 6 0 3 0 5 6 33 5 22 0 7777 2 0 11 3 6666666666 8 11 8 00000 4 00000 6 666666 3 99 7 2222222222222222222222222 88888888 7 555555 222222222222 0 1 5 4 1 5 4 0 2 8 0 9999 9999 9999 4 1 99999 2 5 5555 0 77 3 22 0 6 5 4 5 4 0 1 0
lowQualScore : . . . . . . ....... ..... .... ... . . . . ........................ . . . .. . . ..... . . . . . . ............. .. .. . . . ... . .. . . . . . . . ... . . . . ... . .. . . .. . .......... . ... ...... . . . . . . .. . .. . . . . .. . . . . . . . .. . . . . . .. . . . .. . . .... . . . . ... .. . . . . . . . . . . .. . .. . .... . . .. . .......... . .. . ..... . ..... . ...... . .. . ......................... ........ . ...... ............ . . . . . . . . . . . .... .... .... . . ..... . . .... . .. . .. . . . . . . . . .
lowQualScore : 0 0 0 0 0 0 0000000 00000 0000 000 0 0 5 0 222222222222222222222222 7 7 3 33 0 7 77777 0 5 0 0 0 0 0000000000000 00 00 0 0 0 000 0 00 0 0 0 0 0 0 0 555 0 5 0 0 000 5 33 5 7 00 3 7777777777 0 000 888888 0 2 2 2 0 2 88 5 00 0 2 5 0 22 2 5 0 2 0 5 0 55 0 8 0 0 0 00 0 8 5 66 8 4 2222 0 0 0 7 000 77 0 0 0 0 0 0 2 2 5 0 88 5 00 0 2222 5 8 44 2 0000000000 0 88 0 00000 8 00000 0 000000 0 22 0 0000000000000000000000000 11111111 9 000000 666666666666 7 7 0 4 0 0 0 7 3 9 1 0000 4444 4444 4 3 99999 9 4 0000 8 00 2 44 4 2 0 3 0 1 4 4 0
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAATACCAATGTTCAGTATACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGTTATCTCGTCCTTTCAGTCGAAGCGAAA-------AACAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAACAGAAATTAGATT----TAAAACAAACAGCCGANAANGGCTNAGTGGTCGTTGTGACGGAATGAGACAAT-ATATCTCA-A-GCAGAAAGACAACTGAATGACCAATCCTNTTNCATTCAGTTAGATCATGATC--CCACACTTGAATTCGCA-GAGGAGGTTTCAACAACTGTTAACCGAATGTTCGATAATGGCTACATCATTAAAGAGAATAAAGACTGTTTACTTCCTGAGAATTCCAA------------TTATTCTCTTTTAAATATAAACATACCTGGCAACCCAGGCCACTCCATTGTGTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCTTAATTCTAAATTGCAATAATTTTGAATTCAATGATAAACACTNCCTACAAGTANNNGGTACGGCAATGGGTACNANGATGGCACCTTCCTATGCCAACATTNCCATNGNTAAACTNGAAAAACAACTCTTACTATCGGTACCAATAAAAC--CCCAGTCATGGCTTCGTTTCATTGACGANATTG-ACACGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACTAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCGCACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCCACTAGTTGTCATCCCAAACACTGTTGTAGGAACATACCATATAGCTTAGCACTANGCATTAA-GAGAATCTGTTCAGACCCTCTGACATTCGTAACACGATCNCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAACNGAACAGATATTCTACAGTACAAAAATAAAACACACGACCCTGCAACGCGTCTACC----ATTTGTACTTGCATACCATCCGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTNGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAA-NAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACCCTACCGATGCCA-AAATAGGACAGCCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTAAA-CAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATGTTGTCTACTTGATGAC-T---GGCTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCTCTTAATCT-----GAGAGTTAACACGC--ACCGATCCGATGTACTTACC-----------CGT-AGCT--CCAGATCGCCAG--------TGGCTNAT----C-ACCT---ATG----CTCCACGGGAC-ATG-TTTTCTCGGAGATATC-CATTGTCTGTATAGATCATAACCCTANTT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAA-CCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTTTG
Reference ( gi|1 ) : CAAATCATTTAGTAGACGTCTACGGCTTAAGTCACATTTTACAAAACCTGAACCAAAATATGATAACAGTAAAGCAGATGACACCATTCGATGGTCTGTCGCAGTCAAATATATCTCCATCGGGCATAGATCACGTCAACAATTCACTGGCATTAGCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAA-GTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGAAAATGATATCTCGTCATTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAACTGATATTATAATAAAACAA---GCCGATAAAGGCTCAGCGGTCGTTGTGATGGACAGAGACAACTATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTAAGATCATGATC--CTACACTTGAATTCGCA-GAAAAGGTTTGAACAACTGTTAATGGAATATTCGATAATGGCTACATCACTGAAGAGAAAAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCTTCTTCCAAAGATACACAAACCTGGCAACCCAGGCCGTCCCATTGTGTCAGCAAATGGGCATCCCACAGAAAGAATTTCTGAGTTCGTTGATTTTCACCTGAAACCCCCTGTACGCAATATGCCATCATTTATTCAAGACACCACGGATTACATAAGGAAAGTTGAATCCGAGAATAGTATCGCTCCTGAAACTCTTACGGTCTCGATGGATGTGACATCACTATATACTAATATACCACACGATGATGGTATACTTGCGTGCAAAGAAATATGGAAGAGTAGGACATATCAACAACCACCCACCGAATATCTTGTTGAATTACTTACCCTAATTCTAAGATGCAATCATTCTTAATTTAATGGTAAACACTACCTACATGTACAAGGTACGGCAATGGGCACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAATAAAAC--CCCAGTCATGGCTTCGTTTCATTGACGACACTG-GCATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CGTACT---TCTCGCCAATGATATACACCCAATTA---TAAACTTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAATCCACAGACAGCCACCTATATCTACAACACACTAGTTGTCATCCCAAACACTGCTGTAGGAACATACCATATAGCTTAGCACTACGCATTAA-AATTATCTGTTCAGACCCTCTGACATTCGTACCACGATCACAGGAACTGTCGCAACATTTACACAATAGAGGCTACAAGAAAGTTGCCATTGATTCTCCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACACTGCAACGCGTCTACC----ATTTGTACTTACATACCATCCGGATATTCCTGACGTAAAAAATATAATTTCAAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACCAGTCATCGCCTACAGAAGGCCGAAAAATCTCCGCGATATTCTCGTCCGATCTAGATTAAGCTCGCACCTTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGAAGTTCACCTAGACGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTTAA-CAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATGTTGTCTACTTGATGACTTGACGACTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCACTTAATCT-----GGGAGTTTACTCAC--ACCGATCCGATGTACATACC-----------CGT-----------ATCGCCAG--------TGGCTGAT----C-ACCG---ATG----CTCCACGGGAC-ATG-TTTTGTCGGAGATATC-CATTATCTGCATAGATCATAACCCTAATT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAA-ACTGTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAAAACACAATTATATGCAATAGTTTAAATCTTACTCGGACAGTTCTACTCATTTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCAGCGTTCACAAATAGGTCTTCAACAA-ACTTTTTTG
gi|19 : GCCGAGAATACCAATGTTCAGTATACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGTTATCTCGTCCTTTCAGTCGAAGCGAAA-------AACAACA
gi|16 : TAAAACAGAAATTAGATT----TAAAACAAACAGCCGATAAAGGCTGAGTGGTCGTTGTGACAGAATGAGATAATAATATCTCATATGCAGAAATGTAACACAATGACCAATCCTTTTGCATTCAATTAGATGTTTATCATCTAAACTTGACTTC-CAGGAGGATGTTTCACCAACTGTGAACGAAAT
gi|14 : GAAAATGGCTCAGTGGTCGTTGTGATG------GACA---------------------GACAACTGAATGACCAGTCTTGTTTCATTCAGTTAGGTCATGATC--CCACATTTGAATTCGCA-G---AGGTTTCAACAACTGTTg
gi|17 : AGACTATTATATTTCAGAGGCAGAAAGACAAATGAATGACCAATCCTATTACATTCAGTCAGATCATGATC--CCACACTTGAATTCGCA-GAAAAGGTTTCAACAAATGTTAATCGAATGTTCGATAATGGCTACATCATTAAAGAGAATAAAGATTATTTACTTCCTGAGAATTtacttcctgagaattccaattattctcttttaaatataaacatacctggcaacccaggccactccattgtgtcagca
gi|14 : ACTGTTTACTTCCTGAGAATTCCAA------------TTATTCTCTTTTAAATATAAACATACCTGGCAACCCAGGCCACTCCATTGTGTCAGCA
gi|13 : gaaaatggctcagtggtcgttgtgatggacagacaactgaatgaccagtcttgtttcattcagttaggtcatgatcccacatttgaattcgcagaggtttcaacaTACCTTAATTCTAAATTGCAATAATTTTGAATTCAATGATAAACACTACCTACAAGTAATAGGTACGACAATGGGTACCACGATGGCATCTTCCTATGCCAACATTGCCATTGTTAAACTTGAAAATCATCTCTTACAATCGTTACCTATAAAAC--CCCAGTTATGGCTTCGCTTCATTGACGA
gi|2 : ataacCTTCCTACAAGTACATGGTACGGCAATGGGTACAAAGATGGCACCTTCCTATGCCAACATTTTCATGAGTAAACTAGAAAAACAATTCTTAGTATCGGTACAAATAAAAC--CCCAGTCATGGCTTCGTTTCATTGACGACATTG-ACATGAAATG-GTGTAACAGTTTCGAAAACCTTCAAAGTTT-CCTACA---TCTCGCCAATGATTTCCACCAAACCA---TAAAATTCACTAGTGAAATTTCTAACACGAA-ACACATATTTCTT--GATACA--GTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACAACAAATCCACAGACAGCAATCAGTATCTACTACCCACTAGTTGTAATTCCAAACACTTTTGTAGGAACATACCATATAGCTTAGCACTAAGCATTAAGAAAAATCTGTTCAGACCCTCTGACATTCGTAACATGATCCCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAAACGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGTAACGCGTCTACC----ATTTGTACTTGCATACCATCAGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTAGCCCATAATTGAATCTTCAAACCGTCTTAAAAACTTTTCCCCAGAAAAACGAGTCATCGCCTACAGAAGGTCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACACTACCGATGCCA-AAATAGGACAACCAGGACCTTGCAATTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTG-TTTTAAA-CAATCAAGGACAGGTGCA-------ACATCTGAGATCTAACGCCAACTATAAAACAAGTAATGTTGTCTACTTGATGA----A----TTGCAAACAATGTG-AAAAACAG--TGTCGG-TGAAACG-----AAAACTCCTCTTAATCT-----GAGAGTTAAAACGC--ATCGATCCGATGTACTTACC-----------CGTTAGCTCGCCAGAACGCCAG--------TGGCTTAT----C-ACCT---ATT----CTCCAC-GAAC-ATG-TTTTCTCGGAGATATC-CATTATCTGCATAGATAATAAACCTAATT-GGTCAGACGAGAAG---TGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAA-ACTTTTGGCCTCAACAAGGGGGACGATGTACGAGTTGCTATACACAAATAATATACCTTGCCAGTGCATCTACCAAGACA----TATATGCAATAGTTTAAAT
gi|3 : GAAAAACAACACTTACTATCGGTACCAATAAAAAAACCCAGCCATGGCTTCGTTTCATTGACGAAATTG-ACATGAAATG-GAGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCA--GACAGCCACTAATATTTACTACCCACTAGTTGTCATCCCAAACACTGCTGTAGGAACATACCATATAGTTTAGCACTACGCAATAT-GAGAATCTGTTCAGACCCTCTGACATTCGTAACACGATCACAGGAGCTGTCACAACATTTACTCAATAGGAGCTACACCAAAGCTGCCATTGATTCTGCTATTACGAGAGCTAGAGAACAAAACAGAACAGATATTCTACAACAAAAAAATAAAACACACGACCCTGCAAAGTATCTACCATTAATTTGTACTTACATACCATCCGGACACGCCTGGCGTAAAAAATATATTTTCGAATCACTTGCCCATAATTGAATCTTCAAACCGTCTTAAAAA--TGTTCCCAGAAAAA-AAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCACGATATTCTCGTCCGATCTAAATTAAGCCCGCACCCTAACAATGCCA-AACTAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTG-TTTTAAA-CAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAACCAAGTAATGTTGTCTACTTGAT--------GGCTTGCAAACAATGTGAAAAAACAGTATGTCTG-TGAAACG-----AAAACTCCTATTAATCT-----GAGAG-TTA-TCACGTACCGATCCGATGTACTTACC-----------CGCAAGCTCGCCAGATCGCCAG--------TGGCT-AT----C-ACCT---ATG----CTGCACGGGAC-ATGTTTTTCTCGGAGATATC-CATTATCTGCATAGATCATAACCCTAATT-GGTCAGACGAGAAG---TGCAAAATACGA----TAATC----GTACTGGATCCGCAGA-TTAAATACTTTTCAA-CGTTTTGGCTTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCtcagttgca
gi|15 : ACTGTGAACGAAATGTGTGTGACAACTTCAAAAGCCTGCAATTTTTGCTTGTTAAATGTCGCTTATGCTTTTCATTCTTCTA---TAAAAGTCACAAGTGAG-TTTCAAACACCAGTAC-CATACTTTCACGGATACTCAGTCGTATATCAAGGACGACAATCT--TAGACAGGACATGCACAACA
gi|5 : tcaccaCTAATGAT-TGCATCCAAGAAAAATAAAATTCACTAATGAAATTTCTAACACAAA-ATATATCTTTCTA--GATACACAGACGCACATCAAGGATGATAAACTGATAG--TGGACTTACATACCAAACCAGCAGCCAGTCATCAGTATATACACCCTAGAAGGTGTCATCCTAATCACTGTTGTCAGAAGATACACTACGGTTTGGCACTAGGCATTAA-GAGAATTTGCTCAGACCCTCTGACATTCGTAACACGATCGCAGGAACTGTCATAACGTTTACTCACTAGGGGTTACACCAAAGCTGCCATTGATTTTTCTATTTCGAAAGCTAAAGAACAAATCAGGACAGATATCCTGCAGTACAAAAATATGACGCATT-CTCTGAAACGCGCCTTCC----
gi|4 : gaAAGGATGATAAACTGGTAG--TGGACGTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCCACTAGTTGTCATCCCAAGCACTGTTTTAGGAACATACCATATATCTTAGCACTACGCATTAA-AAGAATCTGTTCAGACCCTCTGACATTCGTAACACGATCCCAGGAACTGTCATAACATTTACTCAATAGGAGCTACACCAAAGCAGCCATTGATTCTGCCATATCGAGAGCTCGAGAACAAAACCGAACAGATATTCTACAGTACAAAAATAAAACACTGGACCATTCAACG
gi|4 : ATTCTACAGTACAAAAATAAAACACTGAACCCTTCAACGCGtcgcgttgaagggttcagtgttttatttttgtactgtagaatttgaataccatttgtacttgcataccatccggatactcctgacgtaaaaaatataatttcaaatcactggcccataattgaatcttcaaaccgtcttaaaaatgttcccagaaaaaacagccattgcctacagaaggccgaaaagtctccgcggtattctcgtccgatctaggttgagcccgcaacctaccgatgccaaaataggacagtttggtccttgcagttcatctagatgcctaacatgcaaacaaatgcctgccactaactgttttaaacaatcaaggactggtccaactatacatctgagatctaacgccaactgtaaaacaagtaatgttgtctacttgatgatttgcaaacaatgtgaaaaacagtttgtcggtgaaacgaaaactcctcttaatctgagagttaacacgcacctatccgatgtacttaccaataagctcgccatatcgccagtggctgatcacctacgctccacgggacaggttttctcggagatatcaattatctgcacagatcataaccctaattggtcagacgagaaacgcaaaatacgagaatcatactggatccacagataaaatactgttcaaccttttggcctcaacaaaggggacgatgtacgtgttgctatatacaaataatatacctcgccagtgcatctaccaatacatatatgcaatagtttaaatcttactcacacagttctactcgacttacttatgttttttcaatatgatgctatgactaaatgtgagcgttcacgaatatgtcttcaacaaacttttt
gi|4 : aaggatgataaactggtagtggacgtacacaccaaacccacagacagccatcagtatctactacccactagttgtcatcccaagcactgttttaggaacataccatatatcttagcactacgcattaaaagaatctgttcagaccctctgacattcgtaacacgatcccaggaactgtcataacatttactcaataggagctacaccaaagcagccattgattctgccatatcgagagctcgagaacaaaaccgaacagatattctacagtacaaaaataaaacactggaccattcaacgtTACC----ATTTGTACTTGCATACCATCCGGATACTCCTGACGTAAAAAATATAATTTCAAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-T-GTTCCCAGAAAAAACAGCCATTGCCTACAGAAGGCCGAAAAGTCTCCGCGGTATTCTCGTCCGATCTAGGTTGAGCCCGCAACCTACCGATGCCA-AAATAGGACAGTTTGGTCCTTGCAGTTCATCTAGATGCCTAACATGCAAACAAATGCCTG--CCACTAACTGTTTTA-AA-CAATCAAGGACTGGTCCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATGTTGTCTACTTGATGATTTG--------CAAACAATGTG-AAAAACAGTTTGTCGG-TGAAACG-----AAAACTCCTCTTAATCT-----GAGAGTTAACACGC--ACCTATCCGATGTACTTACCAATAAGCTCGCCAT-----------ATCGCCAG--------TGGCTGAT----C-ACCT---ACG----CTCCACGGGAC-AGG-TTTTCTCGGAGATATC-AATTATCTGCACAGATCATAACCCTAATT-GGTCAGACGAGAAA---CGCAAAATACGA----GAATC----ATACTGGATCCACAGA-TAAAATACTGTTCAA-CCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATATACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCGACTTACTTATGTTTT-TTCAATATGATGCTATGACTAAATGTGAGCGTTCACGAATATGTCTTCAACAA-ACTTTTTttgaataccatttgtacttgcataccatccggatactcctgacgtaaaaaatataatttcaaatcactggcccataattgaatcttcaaaccgtcttaaaaatgttcccagaaaaaacagccattgcctacagaaggccgaaaagtctccgcggtattctcgtccgatctaggttgagcccgcaacctaccgatgccaaaataggacagtttggtccttgcagttcatctagatgcctaacatgcaaacaaatgcctgccactaactgttttaaacaatcaaggactggtccaactatacatctgagatctaacgccaactgtaaaacaagtaatgttgtctacttgatgatttgcaaacaatgtgaaaaacagtttgtcggtgaaacgaaaactcctcttaatctgagagttaacacgcacctatccgatgtacttaccaataagctcgccatatcgccagtggctgatcacctacgctccacgggacaggttttctcggagatatcaattatctgcacagatcataaccctaattggtcagacgagaaacgcaaaatacgagaatcatactggatccacagataaaatactgttcaaccttttggcctcaacaaaggggacgatgtacgtgttgctatatacaaataatatacctcgccagtgcatctaccaatacatatatgcaatagtttaaatcttactcacacagttctactcgacttacttatgttttttcaatatgatgctatgactaaatgtgagcgttcacgaatatgtcttcaacaaacttttt
gi|9 : aaggatgataaactggtagtggacgtacacaccaaacccacagacagccatcagtatctactacccactagttgtcatcccaagcactgttttaggaacataccatatatcttagcactacgcattaaaagaatctgttcagaccctctgacattcgtaacacgatcccaggaactgtcataacatttactcaataggagctacaccaaagcagccattgattctgccatatcgagagctcgagaacaaaaccgaacagatattctacagtacaaaaataaaacactggaccattcaacgtcgcgttgaagggttcagtgttttatttttgtactgtagaatttgaaCGATGCCTTAAAT--GACAGCCACCCCCTTTTCGTTCATCCAGATGCGCAATATGCTAACAAATGCCTTCTTCACTAACTGTTTC--AATCAATCAACGACTGATGCAATAATATATATCT----TCTAACGCCAGCTGCAAAACAAGT--TG--GT----TTGCTG-CCTATTGGCTTGCAAG-AGTGAG-AAAAACAGTATGTCGA-TGAAACG-----AAAACTCCTCTTAATCT-----GAGAATTAACACGC--TATGATCCGATGTACTTAAC-----------CGTAAGCTTACCAGATCACCAG--------TGGCT
gi|11 : tACTACAAAATAAGTAGCATGGTTTACTTAATGAC--------TTGCATACAGCGTG-ACAAGCACTACGGGGGATGGAGGGGATTTAAAACTCAGCTTAATCTTAGACGACAG--AACATGC--ACTAATCCGTTCTACTAACCAATA-------CGT------------TCGCCAGATGACCAATGGCTG-T----C-ACGT---GTG----CTCCACAAGACAAAG-TTTTCTCAGAAAAATC-TATGATtctta
gi|21 : C--ATCGATCCGACGTACTTCCT-----------CGTCAT--------ATTACCAG--------TGGCTGAT----CAATTG---CT-----CTCCGCAAGAC-ATG-T----------AT-----GTTGTTTGTACAGATCACAACCCCACTT-AATCAGACGAAA
gi|7 : g-----------ATCATCAG--------TAGCTTAT------ACTG-------------CACGGGAC-ATG-TTTACTCGGAGA-ATTACATTGTCTGTATAGATCATAACCCTATTT-GGTCAGAGGAGAAT---CGCAAAATACGA----GAATC----GTATTGGATCCGCAGA-TTAAACACTTTTCAG-CCATTTGGCTTCAATAAAGAGGACAATGCACGTGTTGTTATACA-AAATGATATACTTCGCCAGTGCACCTGCCTATTCA----TATATGCAATAGTTTAAAT---------ATAGT----GTCAT-----ATA----TTGT---ATAT-ATATTA----TATATGTCGGCGTTCACAAACCGGTCTTCAACAACACTTtgtg
gi|6 : cagcagcagcttcgttagcagttttgaagctcaccag-----------ATCATCAG--------TAGCTTATACTGC-ACGGGACATGTTTACTGCACGGGAC-ATG-TTTACCCGGAGATGTA-CATTGTCTGTATAGATCATAACCCTATTT-GGTCAGAGGACAAT---CGCAAAATACGA----GAATC----GTATTGGATCCGCAGA-TTAAACACTTTTCAG-CCATTTGGGTTCAATAAAGAGGACAATGCACGTGTTATTATACA-AAATGATATACTTCGCCAATGCACCTGCCTATTCA----TATATGCAATAGTTTGAA---------GATAGT----GTCAT-----ATA----TTGT---ATAT-ATATTA----TATATGTCGGCGTTCACAAACCGGTCTTCAACAACACTT
gi|12 : acagcagcagcttcgttagcagttttgaagctcaccagAT-ATA-TATTCTCAGAGATATC-AAT-GTTTATATAGAGCTTAACCCTATTTTGGTCAAACGAGACA---CGCA-----C-A----GATTC----GTACTGGATGCGTAGACTTAAAAA--AT-CAA---T-TTGGCCTCACCAAAGGATACGATTTATGCATTTATATTCACAAATc
gi|8 : -TCTTCTCGGAGATATC-CATTATCTGTTTAGATCATAGCCCTAATT-GGTCAGGCGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAA-ACTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACATAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACCCAAACAGTTCTACTCAATTTAC--ATGTTTTGTTCAATATGATGCTATGACTAAATGTCGACGTTCACAAATATGTCTTCAACAA-ACTTctactgattcatatactagtatgcagtgcattaaagatagtgtc
gi|20 : TC-CATTGTTTGTATAGATCATAACC-TAATTTGGTCAGATAA--AGTTACGAGAAATACAA----GAATC----ATACTGGATCGGCATA-CTGAACACAATTCAACAAT-TTGACTTCAACAAAGGGGATGATGTAgt
gi|10 : AAAGTACGATTCTGGATCTCGTATACTGGATCCGCAGA-TTAAATACTATTCAA-CCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTACTATACACAAATAATATACTTCGCCAGCGCATCAACCAATACA----TATATGCAATAGTTTTAATCCTACTCGCACAATTCCACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTT
gi|18 : ACGTGTTACTATACACAAATAATATACTTCGCCAGTGCATCAAGCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTGTTTT
gi|23 : TATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCATTTTACACATGTTTT
gi|22 : TAGTTTAAATCTTACCCACACATTTCTACTCAATTTACAT--GTTTTGTTCAATATGATGCTTTGACTAAATGTCGGCGTTCACGAATATGTCTTCAGCAA-ACTTTTTTG
gi|24 : AAATGTCGGCGTTCACGAATAAGTCTTCAACAA-ACTTTTTTG
Alignments
lowQualScore : 111111111111
lowQualScore : 1 6666666 333333333333333333333333333333333 4444 222 777777777777777777777777 11 1111 000000000000 11 1 1 111 111 11 111 5555555555555555555555 33333333 77777777777777777 22 1 22 11 2 11 333333333 11111 11111 44444444444 1111111 1111 1111 1111
lowQualScore : 5 4 2 5555555 333333333333333333333333333333333 3 3 2 2222 111 1 1 1 0 333333333333333333333333 3333 1 1 1 33 2 3333 6 4 0 0 222222222222 3 3 4 4 3 2 1 333 1 1 11 1 1 1 33 1 2 2 0 0 0 777 1 444 2 0 8 0 11 99 5 6 8 1 8 1 1 0 444 4444444444444444444444 66666666 00000000000000000 1 55 0 11 8 0 11 0 0 0 11 99 1 3 999999999 6 6 66666 66666 5 77777777777 5555555 0000 0 0000 0 4 4 3 1 4 777 8888 8888 4 0 2 1 1 0000 1 1 0 1 1 3 2 3 0 8
lowQualScore : . . . ....... ................................. . . . .... ... . . . . ........................ .... . . . .. . .... . . . . ............ . . . . . . . ... . . .. . . . .. . . . . . . ... . ... . . . . .. .. . . . . . . . . ... ...................... ........ ................. . .. . .. . . .. . . . .. .. . . ......... . . ..... ..... . ........... ....... .... . .... . . . . . . ... .... .... . . . . . .... . . . . . . . . . .
lowQualScore : 5 0 5 0000000 000000000000000000000000000000000 0 0 5 5555 000 0 0 0 7 888888888888888888888888 5555 0 0 2 88 5 8888 7 0 7 7 555555555555 0 0 0 0 0 5 0 000 0 0 77 0 0 0 88 0 5 0 0 0 8 555 4 000 2 8 0 8 00 22 0 0 0 0 0 0 0 8 000 9999999999999999999999 22222222 00000000000000000 0 55 0 00 0 8 00 4 8 8 00 22 0 2 555555555 7 7 77777 77777 7 22222222222 5555555 6666 1 6666 2 4 0 6 0 0 888 5555 5555 0 3 5 2 6 6666 1 9 1 9 9 2 5 2 1 9
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGNTATCTCGTCNTTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAANTNANATTATAATAAAACAAACAGCCGATAAAGGCTCAGCGGTCGTTGTGACGGA--GAGACAA-T-ATATTTCA-GAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTTAGATCATGATC--CCACACTTGAATTCGCA-GAAGAGGTTTCAACAACTGTTAACGGAATGTTCGATAATGGCTACATCACTGAAGAGAANAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCCTCTTCCAAANATANACANACCTGGCAACCCAGGCCGCCCCATTGTGTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCTAATTCTAAGNTGCAATNATTCTNAATTCAATGGTAAACACTACCTACAAGTACAAGGTACGGCAATGGGTACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCGCACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAACACTGTTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCNCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGCAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTGCATACCAT-----------------CCGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAG-AAAAACNAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACCCTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGACT----GGCTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCGATCCGATGTACTTACCCG-T-A-GCTCGC--CAGATCGCCAGTGGCTGAT----CAC----CTATG----CTCCACGGGAC-ATG-TTTTCTCGGAGATATC-CATTGTCTGTATAGATCATAACCCTANTT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTTTG
Reference ( family-3016 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAATACCAATGTTCAGTATACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGTTATCTCGTCCTTTCAGTCGAAGCGAAA-------AACAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAACAGAAATTAGATT----TAAAACAAACAGCCGANAANGGCTNAGTGGTCGTTGTGACGGAATGAGACAA-T-ATATCTCA-A--GCAGAAAGACAACTGAATGACCAATCCTNTTNCATTCAGTTAGATCATGATC--CCACACTTGAATTCGCA-GAGGAGGTTTCAACAACTGTTAACCGAATGTTCGATAATGGCTACATCATTAAAGAGAATAAAGACTGTTTACTTCCTGAGAATTCCAA------------TTATTCTCTTTTAAATATAAACATACCTGGCAACCCAGGCCACTCCATTGTGTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCTTAATTCTAAATTGCAATAATTTTGAATTCAATGATAAACACTNCCTACAAGTANNNGGTACGGCAATGGGTACNANGATGGCACCTTCCTATGCCAACATTNCCATNGNTAAACTNGAAAAACAACTCTTACTATCGGTACCAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGANATTGACACGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACTAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCGCACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAACACTGTTGTAGGAACATACCATATAGCTTAGCACTANGCATTAAGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCNCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAACNGAACAGATATTCTACAGTACAAAAATAAAACACACGACCCTGCAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTGCATACCAT-----------------CCGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTNGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAG-AAAAA-NAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACCCTACCGATGCCA-AAATAGGACAGCCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGACT----GGCTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCGATCCGATGTACTTACCCG-T-A-GCT--C--CAGATCGCCAGTGGCTNAT----CAC----CTATG----CTCCACGGGAC-ATG-TTTTCTCGGAGATATC-CATTGTCTGTATAGATCATAACCCTANTT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTTTG
gi|1 : GCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAA-GTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGAAAATGATATCTCGTCATTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAACTGATATTATAATAAAACAA---GCCGATAAAGGCTCAGCGGTCGTTGTGATGGACAGAGACAACT-ATATTTCA-GAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTAAGATCATGATC--CTACACTTGAATTCGCA-GAAAAGGTTTGAACAACTGTTAATGGAATATTCGATAATGGCTACATCACTGAAGAGAAAAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCTTCTTCCAAAGATACACAAACCTGGCAACCCAGGCCGTCCCATTGTGTCAGCA
gi|1 : caaatcatttagtagacgtctacggcttaagtcacattttacaaaacctgaaccaaaatatgataacagtaaagcagatgacaccattcgatggtctgtcgcagtcaaatatatctccatcgggcatagatcacgtcaacaattcactggcattaTACCCTAATTCTAAGATGCAATCATTCTTAATTTAATGGTAAACACTACCTACATGTACAAGGTACGGCAATGGGCACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACACTGGCATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CGTACT---TCTCGCCAATGATATACACCCAATTA---TAAACTTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAATCCACAGACAGCCACCTATATCTACAACAC-ACTAGTTGTCATCCCAAACACTGCTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAAATTA-TCTGTTCAGACCCTCTGACATTCGTACCACGATCACAGGAACTGTCGCAACATTTACACAATAGAGGCTACAAGAAAGTTGCCATTGATTCTCCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACACTGCAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTACATACCAT-----------------CCGGATATTCCTGACGTAAAAAATATAATTTCAAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAG-AAAAACCAGTCATCGCCTACAGAAGGCCGAAAAATCTCCGCGATATTCTCGTCCGATCTAGATTAAGCTCGCACCTTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGAAGTTCACCTAGACGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTTAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGACTTGACGACTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCACTTAATCTGGGA-----GTTTACTCACACCGATCCGATGTACATACCCG-T--------------ATCGCCAGTGGCTGAT----CAC----CGATG----CTCCACGGGAC-ATG-TTTTGTCGGAGATATC-CATTATCTGCATAGATCATAACCCTAATT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTGTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAAAACACAATTATATGCAATAGTTTAAATCTTACTCGGACAGTTCTACTCATTTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCAGCGTTCACAAATAGGTCTTCAACAA-ACTTTTTTGaatgggcatcccacagaaagaatttctgagttcgttgattttcacctgaaaccccctgtacgcaatatgccatcatttattcaagacaccacggattacataaggaaagttgaatccgagaatagtatcgctcctgaaactcttacggtctcgatggatgtgacatcactatatactaatataccacacgatgatggtatacttgcgtgcaaagaaatatggaagagtaggacatatcaacaaccacccaccgaatatcttgttgaattacttaccctaattctaagatgcaatcattcttaatttaatggtaaacactacctacatgtacaaggtacggcaatgggcaccaagatggcaccttcctatgccaacattttcatgggtaaactcgaaaaacaactcttactatcggtaccaataaaaccccagtcatggcttcgtttcattgacgacactggcatgaaatggtgtgacagtttcgaaaaccttcaaagtttcgtacttctcgccaatgatatacacccaattataaacttcaccagtgaaatttctaacacgaaacacatatttctagatacacagtcacacatcaaggatgataaactggtagtggacttacacaccaaatccacagacagccacctatatctacaacacactagttgtcatcccaaacactgctgtaggaacataccatatagcttagcactacgcattaaaattatctgttcagaccctctgacattcgtaccacgatcacaggaactgtcgcaacatttacacaatagaggctacaagaaagttgccattgattctcccatttcgagagctagagaacaaaaccgaacagatattctacaatacaaaaataaaacacacgacactgcaacgcgtctaccatttgtacttacataccatccggatattcctgacgtaaaaaatataatttcaaatcactggcccataattgaatcttcaaaccgtcttaaaaattgttcccagaaaaaccagtcatcgcctacagaaggccgaaaaatctccgcgatattctcgtccgatctagattaagctcgcaccttaccgatgccaaaataggacagtcaggcccttgaagttcacctagacgcctaacatgcaaacaaatgcctgtcactaactgttttttaacaatcaaggactggtgcaactatacatctgagatctaacgccaactgtaaaacaagtaatgttgtctacttgatgacttgacgacttgcaaacaatgtgaaaaacagtatgtcggtgaaacgaaaactccacttaatctgggagtttactcacaccgatccgatgtacatacccgtatcgccagtggctgatcaccgatgctccacgggacatgttttgtcggagatatccattatctgcatagatcataaccctaattggtcagacgagaagcgcaaaatacgagaatcgtactggatccgcagattaaatactattcaaactgttggcctcaacaaaggggacgatgtacgtgttgctatacacaaataatatacctcgccagtgcatctaccaaaacacaattatatgcaatagtttaaatcttactcggacagttctactcattttacatatgttttgttcaatatgatgctatgactaaatgtcagcgttcacaaataggtcttcaacaaacttttttg
gi|10 : caaatcatttagtagacgtctacggcttaagtcacattttacaaaacctgaaccaaaatatgataacagtaaagcagatgacaccattcgatggtctgtcgcagtcaaatatatctccatcgggcatagatcacgtcaacaattcactggcattagccgagaataccaatgttcagtacacacaatttaaactaaaagtaaatggcagccaccaagacaatccagagaacttaaaacatttattcaaagtgtcgaaaatgatatctcgtcatttcagccgaagcgaaaccatcacaacaacatatcaaagtctgagaaaaatgcactttgtgccttaaaacagaactgatattataataaaacaagccgataaaggctcagcggtcgttgtgatggacagagacaactatatttcagaggcagaaagacaactgaatgaccaatcctattacattcagtaagatcatgatcctacacttgaattcgcagaaaaggtttgaacaactgttaatggaatattcgataatggctacatcactgaagagaaaaaagattatttacttcctgagaattccaaagccgggctgttctatcttcttccaaagatacacaaacctggcaacccaggccgtcccattgtgtcagcaaatgggcatcccacagaaagaatttctgagttcgttgattttcacctgaaaccccctgtacgcaatatgccatcatttattcaagacaccacggattacataaggaaagttgaatccgagaatagtatcgctcctgaaactcttacggtctcgatggatgtgacatcactatatactaatataccacacgatgatggtatacttgcgtgcaaagaaatatggaagagtaggacatatcaacaaccacccaccgaatatcttgttgaattactAAAGTACGATTCTGGATCTCGTATACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTACTATACACAAATAATATACTTCGCCAGCGCATCAACCAATACA----TATATGCAATAGTTTTAATCCTACTCGCACAATTCCACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTT
gi|11 : ACTACAAAATAAGTAGCA--TGGTTTACTTAATGACT--------TGCATACAGCGTG-ACAAGCACTACGGGGGATGGAGGGGATTTAAAACTCAGCTTAATCTTAGACGACAG--AACATGCACTAATCCGTTCTACTAACCAA-T-ACGTT--CGCCAGATGACCAATGGCTG-T----CAC----GTGTG----CTCCACAAGACAAAG-TTTTCTCAGAAAAATC-TAT
gi|12 : AT-ATA-TATTCTCAGAGATATC-AAT-GTTTATATAGAGCTTAACCCTATTTTGGTCAAACGAGACA---CGCA-----C-A----GATTC----GTACTGGATGCGTAGACTTAAAAA--AT-CAA---TTTGGCCTCACCAAAGGATACGATTTATGCATTTATATTCACAAATgat
gi|13 : TACCTTAATTCTAAATTGCAATAATTTTGAATTCAATGATAAACACTACCTACAAGTAATAGGTACGACAATGGGTACCACGATGGCATCTTCCTATGCCAACATTGCCATTGTTAAACTTGAAAATCATCTCTTACAATCGTTACCTAT--AAAACCCCAGTTATGGCTTCGCTTCATTGACGActactgattcatatactagtatgcagtgcattaaagatagtgtc
gi|14 : ataacGAAAATGGCTCAGTGGTCGTTGTGATGGA-------------------------CAGA----CAACTGAATGACCAGTCTTGTTTCATTCAGTTAGGTCATGATC--CCACATTTGAATTCGCA----GAGGTTTCAACAACTGTTTAC
gi|14 : ACTGTTTACTTCCTGAGAATTCCAA------------TTATTCTCTTTTAAATATAAACATACCTGGCAACCCAGGCCACTCCATTGTGTCAGCAttcctgagaattccaattattctcttttaaatataaacatacctggcaacccaggccactccattgtgtcagca
gi|15 : gaaaatggctcagtggtcgttgtgatggacagacaactgaatgaccagtcttgtttcattcagttaggtcatgatcccacatttgaattcgcagaggtttcaacaTGA-ACGAAATGTGTGTGACAACTTCAAAAGCCTGCAATTTTTGCTTGTTAAATGTCGCTTATGCTTTTCATTCTTCTA---TAAAAGTCACAAGTGAG-TTTCAAACACCAGTAC-CATACTTTCACGGATACTCAGTCGTATATCAAGGACGACAATCT--TAGACAGGACATGCACAACA
gi|16 : tcaccaactgTAAAACAGAAATTAGATT----TAAAACAAACAGCCGATAAAGGCTGAGTGGTCGTTGTGACAGAATGAGATAA-TAATATCTCATAT-GCAGAAATGTAACACAATGACCAATCCTTTTGCATTCAATTAGATGTTTATCATCTAAACTTGACTTC-CAGGAGGATGTTTCACCAACTGTGAACGAAATG
gi|17 : AGACTA-TTATATTTCA-GAGGCAGAAAGACAAATGAATGACCAATCCTATTACATTCAGTCAGATCATGATC--CCACACTTGAATTCGCA-GAAAAGGTTTCAACAAATGTTAATCGAATGTTCGATAATGGCTACATCATTAAAGAGAATAAAGATTATTTACTTCCTGAGAATT
gi|18 : ACGTGTTACTATACACAAATAATATACTTCGCCAGTGCATCAAGCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTGTTTT
gi|19 : GCCGAGAATACCAATGTTCAGTATACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGTTATCTCGTCCTTTCAGTCGAAGCGAAA-------AACAACA
gi|2 : CTTCCTACAAGTACATGGTACGGCAATGGGTACAAAGATGGCACCTTCCTATGCCAACATTTTCATGAGTAAACTAGAAAAACAATTCTTAGTATCGGTACAAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTAACAGTTTCGAAAACCTTCAAAGTTT-CCTACA---TCTCGCCAATGATTTCCACCAAACCA---TAAAATTCACTAGTGAAATTTCTAACACGAA-ACACATATTTCTT--GATACA--GTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACAACAAATCCACAGACAGCAATCAGTATCTACTACCC-ACTAGTTGTAATTCCAAACACTTTTGTAGGAACATACCATATAGCTTAGCACTAAGCATTAAGAAAAATCTGTTCAGACCCTCTGACATTCGTAACATGATCCCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAAACGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGTAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTGCATACCAT-----------------CAGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTAGCCCATAATTGAATCTTCAAACCGTCTTAAAAACTTTTCCCCAG-AAAAACGAGTCATCGCCTACAGAAGGTCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACACTACCGATGCCA-AAATAGGACAACCAGGACCTTGCAATTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTG-TTTTAAACAATCAAGGACAGGTGCA-------ACATCTGAGATCTAACGCCAACTATAAAACAAGTAATG--TTGTCTACTTGATGA--------ATTGCAAACAATGTG-AAAAACAG--TGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAAAACGCATCGATCCGATGTACTTACCCGTT-A-GCTCGC--CAGAACGCCAGTGGCTTAT----CAC----CTATT----CTCCAC-GAAC-ATG-TTTTCTCGGAGATATC-CATTATCTGCATAGATAATAAACCTAATT-GGTCAGACGAGAAG---TGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTTTTGGCCTCAACAAGGGGGACGATGTACGAGTTGCTATACACAAATAATATACCTTGCCAGTGCATCTACCAAGACA----TATATGCAATAGTTTAAAT
gi|20 : TC-CATTGTTTGTATAGATCATAACCTAATTT-GGTCAGATAA--AGTTACGAGAAATACAA----GAATC----ATACTGGATCGGCATA-CTGAACACAATTCAACAATTTGACTTCAACAAAGGGGATGATGTAtcagttgca
gi|21 : GCATCGATCCGACGTACTTCCTCG-T-----------CATATTACCAGTGGCTGAT----CAA----TTGCT----CTCCGCAAGAC-ATG-T----------AT-----GTTGTTTGTACAGATCACAACCCCACTT-AATCAGACGAAA
gi|22 : TAGTTTAAATCTTACCCACACATTTCTACTCAATTTACAT--GTTTTGTTCAATATGATGCTTTGACTAAATGTCGGCGTTCACGAATATGTCTTCAGCAA-ACTTTTTTGtgtg
gi|23 : TATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCATTTTACACATGTTTT
gi|24 : AAATGTCGGCGTTCACGAATAAGTCTTCAACAA-ACTTTTTTG
gi|3 : GAAAAACAACACTTACTATCGGTACCAATAAAAAAACCCAGCCATGGCTTCGTTTCATTGACGAAATTGACATGAAATG-GAGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACC--CAGACAGCCACTAATATTTACTACCC-ACTAGTTGTCATCCCAAACACTGCTGTAGGAACATACCATATAGTTTAGCACTACGCAATATGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCACAGGAGCTGTCACAACATTTACTCAATAGGAGCTACACCAAAGCTGCCATTGATTCTGCTATTACGAGAGCTAGAGAACAAAACAGAACAGATATTCTACAACAAAAAAATAAAACACACGACCCTGCAA---AGTATCTA-----CCATTAA----------TTTGTAC--------TTACATACCAT-----------------CCGGACACGCCTGGCGTAAAAAATATATTTTCGAATCACTTGCCCATAATTGAATCTTCAAACCGTCTTAAAAA--TGTTCCCAG-AAAAA-AAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCACGATATTCTCGTCCGATCTAAATTAAGCCCGCACCCTAACAATGCCA-AACTAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTG-TTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAACCAAGTAATG--TTGTCTACTTGA----T----GGCTTGCAAACAATGTGAAAAAACAGTATGTCTG-TGAAACG-----AAAACTCCTATTAATCTGAGA-----GTTATCACGTACCGATCCGATGTACTTACCCG-CAA-GCTCGC--CAGATCGCCAGTGGCT-AT----CAC----CTATG----CTGCACGGGAC-ATGTTTTTCTCGGAGATATC-CATTATCTGCATAGATCATAACCCTAATT-GGTCAGACGAGAAG---TGCAAAATACGA----TAATC----GTACTGGATCCGCAGA-TTAAATACTTTTCAACGTTTTGGCTTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATC
gi|4 : AAGGATGATAAACTGGTAG--TGGACGTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAGCACTGTTTTAGGAACATACCATATATCTTAGCACTACGCATTAAAAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCCCAGGAACTGTCATAACATTTACTCAATAGGAGCTACACCAAAGCAGCCATTGATTCTGCCATATCGAGAGCTCGAGAACAAAACCGAACAGATATTCTACAGTACAAAAATAAAACACTGGACCATTCAACGTCGCGTTGAAGGGTTC----AGTGTTTTATTTTTGTACTGTAGAATTTGAATACCATTTGTACTTGCATACCATCCGGATACTCCTGACGTAAAAAATATAATTTCAAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA--TGTTCCCAGAAAAAA-CAGCCATTGCCTACAGAAGGCCGAAAAGTCTCCGCGGTATTCTCGTCCGATCTAGGTTGAGCCCGCAACCTACCGATGCCA-AAATAGGACAGTTTGGTCCTTGCAGTTCATCTAGATGCCTAACATGCAAACAAATGCCTG--CCACTAACTG-TTTTAAACAATCAAGGACTGGTCCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGA--------TTTGCAAACAATGTG-AAAAACAGTTTGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCTATCCGATGTACTTACCAA-TAA-GCTCGC--CATATCGCCAGTGGCTGAT----CAC----CTACG----CTCCACGGGAC-AGG-TTTTCTCGGAGATATC-AATTATCTGCACAGATCATAACCCTAATT-GGTCAGACGAGAAA---CGCAAAATACGA----GAATC----ATACTGGATCCACAGA-TAAAATACTGTTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATATACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCGACTTACTTATGTTTT-TTCAATATGATGCTATGACTAAATGTGAGCGTTCACGAATATGTCTTCAACAA-ACTTTTT
gi|5 : CTAATGATTGC-ATCCAAGAAAAATAAAATTCACTAATGAAATTTCTAACACAAA-ATATATCTTTCTA--GATACACAGACGCACATCAAGGATGATAAACTGATAG--TGGACTTACATACCAAACCAGCAGCCAGTCATCAGTATATAC-ACCCTAGAAGGTGTCATCCTAATCACTGTTGTCAGAAGATACACTACGGTTTGGCACTAGGCATTAAGAGAA-TTTGCTCAGACCCTCTGACATTCGTAACACGATCGCAGGAACTGTCATAACGTTTACTCACTAGGGGTTACACCAAAGCTGCCATTGATTTTTCTATTTCGAAAGCTAAAGAACAAATCAGGACAGATATCCTGCAGTACAAAAATATGACGCATT-CTCTGAAA---CGCGCCTT-----CC----
gi|6 : ga-A-GCT--CACCAGATCATCAGTAGCTTATACTGCACGGGAC-ATGTTTACTGCACGGGAC-ATG-TTTACCCGGAGATGTA-CATTGTCTGTATAGATCATAACCCTATTT-GGTCAGAGGACAAT---CGCAAAATACGA----GAATC----GTATTGGATCCGCAGA-TTAAACACTTTTCAGCCATTTGGGTTCAATAAAGAGGACAATGCACGTGTTATTATACA-AAATGATATACTTCGCCAATGCACCTGCCTATTCA----TATATGCAATAGTTTGA---------AGATAGT--------GT---CATATA--TTGT---ATAT-ATATTA----TATATGTCGGCGTTCACAAACCGGTCTTCAACAACACTT
gi|7 : acagcagcagcttcgttagcagttttga-A-GCT--CACCAGATCATCAGTAGCT---------------TATA----CTGCACGGGAC-ATG-TTTACTCGGAGA-ATTACATTGTCTGTATAGATCATAACCCTATTT-GGTCAGAGGAGAAT---CGCAAAATACGA----GAATC----GTATTGGATCCGCAGA-TTAAACACTTTTCAGCCATTTGGCTTCAATAAAGAGGACAATGCACGTGTTGTTATACA-AAATGATATACTTCGCCAGTGCACCTGCCTATTCA----TATATGCAATAGTTTAAAT---------ATAGT--------GT---CATATA--TTGT---ATAT-ATATTA----TATATGTCGGCGTTCACAAACCGGTCTTCAACAACACTTc
gi|8 : cagcagcagcttcgttagcagttttga-TCTTCTCGGAGATATC-CATTATCTGTTTAGATCATAGCCCTAATT-GGTCAGGCGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACATAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACCCAAACAGTTCTACTCAATTTAC--ATGTTTTGTTCAATATGATGCTATGACTAAATGTCGACGTTCACAAATATGTCTTCAACAA-ACTT
gi|9 : CGATGCCTTAAAT--GACAGCCACCCCCTTTTCGTTCATCCAGATGCGCAATATGCTAACAAATGCCTTCTTCACTAACTGTTTC-AATCAATCAACGACTGATGCAATAATATATATCT----TCTAACGCCAGCTGCAAAACAAGT--TGGTTTG-CTGCCT----ATT----GGCTTGCAAG-AGTGAG-AAAAACAGTATGTCGA-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----ATTAACACGCTATGATCCGATGTACTTAACCG-TAA-GCTTAC--CAGATCACCAGTGGCTgt
Alignments
lowQualScore : 1 3333333 2222 222 555555555555555 11 11 444444444444 11 1 1 111 111 11 111 5555555555555555555555 33333333 77777777777777777 22 11 2 11 333333333 11111 11111 222222 1111111 1111 1111 1111
lowQualScore : 5 1 1 1111111 1 1 1 4444 111 0 0 222222222222222 0 2 2 3333 1 1 1 33 2 33 1 444444444444 1 1 1 1 1 1 3 33 2 0 0 0 777 1 444 1 0 8 0 11 99 5 6 8 8 1 0 444 4444444444444444444444 66666666 00000000000000000 0 55 99 8 0 11 0 0 0 11 99 1 3 999999999 6 6 66666 66666 000000 3333333 0000 0 0000 0 4 4 3 1 4 777 8888 8888 4 0 2 1 1 0000 1 1 0 1 1 3 2 3 0 8
lowQualScore : . . . ....... . . . .... ... . . ............... . . . .... . . . .. . .. . ............ . . . . . . . .. . . . . ... . ... . . . . .. .. . . . . . . ... ...................... ........ ................. . .. .. . . .. . . . .. .. . . ......... . . ..... ..... ...... ....... .... . .... . . . . . . ... .... .... . . . . . .... . . . . . . . . . .
lowQualScore : 5 0 0 5555555 0 0 0 5555 000 7 7 333333333333333 8 5 5 5555 2 2 2 88 5 22 0 555555555555 0 0 0 0 0 0 7 88 5 0 0 8 555 4 000 4 8 0 8 00 22 0 0 0 0 0 8 000 9999999999999999999999 22222222 00000000000000000 2 55 88 0 8 00 4 8 8 00 22 0 2 555555555 7 7 77777 77777 999999 5555555 6666 1 6666 2 4 0 6 0 0 888 5555 5555 0 3 5 2 6 6666 1 9 1 9 9 2 5 2 1 9
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGNTATCTCGTCNTTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAANTNANATTATAATAAAACAAACAGCCGATAAAGGCTCAGCGGTCGTTGTGACGG--A--GAGACAA-T-ATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTTAGATCATGATC--CCACACTTGAATTCGCA-GAAGAGGTTTCAACAACTGTTAACGGAATGTTCGATAATGGCTACATCACTGAAGAGAANAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCCTCTTCCAAANATANACANACCTGGCAACCCAGGCCGCCCCATTGTGTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCTAATTCTAAGNTGCAATNATTCTNAATTCAATGGTAAACACTACCTACAAGTACAAGGTACGGCAATGGGTACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCGCACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAACACTGTTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCNCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGCAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTGCATACCAT-----------------CCGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACNAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACCCTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGACT----GGCTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCGATCCGATGTACTTACCCG-T-A-GCTCGCCAGATCGCCAGTGGCTGAT----CAC----CTATG----CTCCACGGGAC-ATG-TTTTCTCGGAGATATC-CATTGTCTGTATAGATCATAACCCTANTT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTTTG
Reference ( family-3016 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGNTATCTCGTCNTTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAANTNANATTATAATAAAACAAACAGCCGATAAAGGCTCAGCGGTCGTTGTGACGG--A--GAGACAA-T-ATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTTAGATCATGATC--CCACACTTGAATTCGCA-GAAGAGGTTTCAACAACTGTTAACGGAATGTTCGATAATGGCTACATCACTGAAGAGAANAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCCTCTTCCAAANATANACANACCTGGCAACCCAGGCCGCCCCATTGTGTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCTAATTCTAAGNTGCAATNATTCTNAATTCAATGGTAAACACTACCTACAAGTACAAGGTACGGCAATGGGTACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCGCACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAACACTGTTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCNCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGCAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTGCATACCAT-----------------CCGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACNAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACCCTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGACT----GGCTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCGATCCGATGTACTTACCCG-T-A-GCTCGCCAGATCGCCAGTGGCTGAT----CAC----CTATG----CTCCACGGGAC-ATG-TTTTCTCGGAGATATC-CATTGTCTGTATAGATCATAACCCTANTT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTTTG
gi|1 : GCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAA-GTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGAAAATGATATCTCGTCATTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAACTGATATTATAATAAAACA---AGCCGATAAAGGCTCAGCGGTCGTTGTGATGGACA--GAGACAACT-ATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTAAGATCATGATC--CTACACTTGAATTCGCA-GAAAAGGTTTGAACAACTGTTAATGGAATATTCGATAATGGCTACATCACTGAAGAGAAAAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCTTCTTCCAAAGATACACAAACCTGGCAACCCAGGCCGTCCCATTGTGTCAGCA
gi|1 : caaatcatttagtagacgtctacggcttaagtcacattttacaaaacctgaaccaaaatatgataacagtaaagcagatgacaccattcgatggtctgtcgcagtcaaatatatctccatcgggcatagatcacgtcaacaattcactggcattaTACCCTAATTCTAAGATGCAATCATTCTTAATTTAATGGTAAACACTACCTACATGTACAAGGTACGGCAATGGGCACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACACTGGCATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CGTACT---TCTCGCCAATGATATACACCCAATTA---TAAACTTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAATCCACAGACAGCCACCTATATCTACAACAC-ACTAGTTGTCATCCCAAACACTGCTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAAATTA-TCTGTTCAGACCCTCTGACATTCGTACCACGATCACAGGAACTGTCGCAACATTTACACAATAGAGGCTACAAGAAAGTTGCCATTGATTCTCCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACACTGCAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTACATACCAT-----------------CCGGATATTCCTGACGTAAAAAATATAATTTCAAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACCAGTCATCGCCTACAGAAGGCCGAAAAATCTCCGCGATATTCTCGTCCGATCTAGATTAAGCTCGCACCTTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGAAGTTCACCTAGACGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTTAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGACTTGACGACTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCACTTAATCTGGGA-----GTTTACTCACACCGATCCGATGTACATACCCG-T------------ATCGCCAGTGGCTGAT----CAC----CGATG----CTCCACGGGAC-ATG-TTTTGTCGGAGATATC-CATTATCTGCATAGATCATAACCCTAATT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTGTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAAAACACAATTATATGCAATAGTTTAAATCTTACTCGGACAGTTCTACTCATTTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCAGCGTTCACAAATAGGTCTTCAACAA-ACTTTTTTGaatgggcatcccacagaaagaatttctgagttcgttgattttcacctgaaaccccctgtacgcaatatgccatcatttattcaagacaccacggattacataaggaaagttgaatccgagaatagtatcgctcctgaaactcttacggtctcgatggatgtgacatcactatatactaatataccacacgatgatggtatacttgcgtgcaaagaaatatggaagagtaggacatatcaacaaccacccaccgaatatcttgttgaattacttaccctaattctaagatgcaatcattcttaatttaatggtaaacactacctacatgtacaaggtacggcaatgggcaccaagatggcaccttcctatgccaacattttcatgggtaaactcgaaaaacaactcttactatcggtaccaataaaaccccagtcatggcttcgtttcattgacgacactggcatgaaatggtgtgacagtttcgaaaaccttcaaagtttcgtacttctcgccaatgatatacacccaattataaacttcaccagtgaaatttctaacacgaaacacatatttctagatacacagtcacacatcaaggatgataaactggtagtggacttacacaccaaatccacagacagccacctatatctacaacacactagttgtcatcccaaacactgctgtaggaacataccatatagcttagcactacgcattaaaattatctgttcagaccctctgacattcgtaccacgatcacaggaactgtcgcaacatttacacaatagaggctacaagaaagttgccattgattctcccatttcgagagctagagaacaaaaccgaacagatattctacaatacaaaaataaaacacacgacactgcaacgcgtctaccatttgtacttacataccatccggatattcctgacgtaaaaaatataatttcaaatcactggcccataattgaatcttcaaaccgtcttaaaaattgttcccagaaaaaccagtcatcgcctacagaaggccgaaaaatctccgcgatattctcgtccgatctagattaagctcgcaccttaccgatgccaaaataggacagtcaggcccttgaagttcacctagacgcctaacatgcaaacaaatgcctgtcactaactgttttttaacaatcaaggactggtgcaactatacatctgagatctaacgccaactgtaaaacaagtaatgttgtctacttgatgacttgacgacttgcaaacaatgtgaaaaacagtatgtcggtgaaacgaaaactccacttaatctgggagtttactcacaccgatccgatgtacatacccgtatcgccagtggctgatcaccgatgctccacgggacatgttttgtcggagatatccattatctgcatagatcataaccctaattggtcagacgagaagcgcaaaatacgagaatcgtactggatccgcagattaaatactattcaaactgttggcctcaacaaaggggacgatgtacgtgttgctatacacaaataatatacctcgccagtgcatctaccaaaacacaattatatgcaatagtttaaatcttactcggacagttctactcattttacatatgttttgttcaatatgatgctatgactaaatgtcagcgttcacaaataggtcttcaacaaacttttttg
gi|10 : caaatcatttagtagacgtctacggcttaagtcacattttacaaaacctgaaccaaaatatgataacagtaaagcagatgacaccattcgatggtctgtcgcagtcaaatatatctccatcgggcatagatcacgtcaacaattcactggcattagccgagaataccaatgttcagtacacacaatttaaactaaaagtaaatggcagccaccaagacaatccagagaacttaaaacatttattcaaagtgtcgaaaatgatatctcgtcatttcagccgaagcgaaaccatcacaacaacatatcaaagtctgagaaaaatgcactttgtgccttaaaacagaactgatattataataaaacaagccgataaaggctcagcggtcgttgtgatggacagagacaactatatttcagaggcagaaagacaactgaatgaccaatcctattacattcagtaagatcatgatcctacacttgaattcgcagaaaaggtttgaacaactgttaatggaatattcgataatggctacatcactgaagagaaaaaagattatttacttcctgagaattccaaagccgggctgttctatcttcttccaaagatacacaaacctggcaacccaggccgtcccattgtgtcagcaaatgggcatcccacagaaagaatttctgagttcgttgattttcacctgaaaccccctgtacgcaatatgccatcatttattcaagacaccacggattacataaggaaagttgaatccgagaatagtatcgctcctgaaactcttacggtctcgatggatgtgacatcactatatactaatataccacacgatgatggtatacttgcgtgcaaagaaatatggaagagtaggacatatcaacaaccacccaccgaatatcttgttgaattactAAAGTACGATTCTGGATCTCGTATACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTACTATACACAAATAATATACTTCGCCAGCGCATCAACCAATACA----TATATGCAATAGTTTTAATCCTACTCGCACAATTCCACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTT
gi|11 : ACTACAAAATAAGTAGCA--TGGTTTACTTAATGACT--------TGCATACAGCGTG-ACAAGCACTACGGGGGATGGAGGGGATTTAAAACTCAGCTTAATCTTAGACGACAG--AACATGCACTAATCCGTTCTACTAACCAA-T-ACGTTCGCCAGATGACCAATGGCTG-T----CAC----GTGTG----CTCCACAAGACAAAG-TTTTCTCAGAAAAATC-TAT
gi|12 : AT-ATA-TATTCTCAGAGATATC-AAT-GTTTATATAGAGCTTAACCCTATTTTGGTCAAACGAGACA---CGCA-----C-A----GATTC----GTACTGGATGCGTAGACTTAAAAA--AT-CAA---TTTGGCCTCACCAAAGGATACGATTTATGCATTTATATTCACAAATgat
gi|13 : TACCTTAATTCTAAATTGCAATAATTTTGAATTCAATGATAAACACTACCTACAAGTAATAGGTACGACAATGGGTACCACGATGGCATCTTCCTATGCCAACATTGCCATTGTTAAACTTGAAAATCATCTCTTACAATCGTTACCTAT--AAAACCCCAGTTATGGCTTCGCTTCATTGACGActactgattcatatactagtatgcagtgcattaaagatagtgtc
gi|14 : ataacGAAAATGGCTCAGTGGTCGTTGTGATGG--A------------------------CAGA----CAACTGAATGACCAGTCTTGTTTCATTCAGTTAGGTCATGATC--CCACATTTGAATTCGC----AGAGGTTTCAACAACTGTTTAC
gi|14 : ACTGTTTACTTCCTGAGAATTCCAA------------TTATTCTCTTTTAAATATAAACATACCTGGCAACCCAGGCCACTCCATTGTGTCAGCAttcctgagaattccaattattctcttttaaatataaacatacctggcaacccaggccactccattgtgtcagca
gi|15 : gaaaatggctcagtggtcgttgtgatggacagacaactgaatgaccagtcttgtttcattcagttaggtcatgatcccacatttgaattcgcagaggtttcaacaTGA-ACGAAATGTGTGTGACAACTTCAAAAGCCTGCAATTTTTGCTTGTTAAATGTCGCTTATGCTTTTCATTCTTCTA---TAAAAGTCACAAGTGAG-TTTCAAACACCAGTAC-CATACTTTCACGGATACTCAGTCGTATATCAAGGACGACAATCT--TAGACAGGACATGCACAACA
gi|16 : tcaccaactgTAAAACAGAAATTAGATT----TAAAACAAACAGCCGATAAAGGCTGAGTGGTCGTTGTGACAG--AATGAGATAA-TAATATCTCATATGCAGAAATGTAACACAATGACCAATCCTTTTGCATTCAATTAGATGTTTATCATCTAAACTTGACTTC-CAGGAGGATGTTTCACCAACTGTGAACGAAATG
gi|17 : AGACTA-TTATATTTCAGAGGCAGAAAGACAAATGAATGACCAATCCTATTACATTCAGTCAGATCATGATC--CCACACTTGAATTCGCA-GAAAAGGTTTCAACAAATGTTAATCGAATGTTCGATAATGGCTACATCATTAAAGAGAATAAAGATTATTTACTTCCTGAGAATT
gi|18 : ACGTGTTACTATACACAAATAATATACTTCGCCAGTGCATCAAGCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTGTTTT
gi|19 : GCCGAGAATACCAATGTTCAGTATACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGTTATCTCGTCCTTTCAGTCGAAGCGAAA-------AACAACA
gi|2 : CTTCCTACAAGTACATGGTACGGCAATGGGTACAAAGATGGCACCTTCCTATGCCAACATTTTCATGAGTAAACTAGAAAAACAATTCTTAGTATCGGTACAAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTAACAGTTTCGAAAACCTTCAAAGTTT-CCTACA---TCTCGCCAATGATTTCCACCAAACCA---TAAAATTCACTAGTGAAATTTCTAACACGAA-ACACATATTTCTT--GATACA--GTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACAACAAATCCACAGACAGCAATCAGTATCTACTACCC-ACTAGTTGTAATTCCAAACACTTTTGTAGGAACATACCATATAGCTTAGCACTAAGCATTAAGAAAAATCTGTTCAGACCCTCTGACATTCGTAACATGATCCCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAAACGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGTAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTGCATACCAT-----------------CAGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTAGCCCATAATTGAATCTTCAAACCGTCTTAAAAACTTTTCCCCAGAAAAACGAGTCATCGCCTACAGAAGGTCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACACTACCGATGCCA-AAATAGGACAACCAGGACCTTGCAATTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTG-TTTTAAACAATCAAGGACAGGTGCA-------ACATCTGAGATCTAACGCCAACTATAAAACAAGTAATG--TTGTCTACTTGATGA--------ATTGCAAACAATGTG-AAAAACAG--TGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAAAACGCATCGATCCGATGTACTTACCCGTT-A-GCTCGCCAGAACGCCAGTGGCTTAT----CAC----CTATT----CTCCAC-GAAC-ATG-TTTTCTCGGAGATATC-CATTATCTGCATAGATAATAAACCTAATT-GGTCAGACGAGAAG---TGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTTTTGGCCTCAACAAGGGGGACGATGTACGAGTTGCTATACACAAATAATATACCTTGCCAGTGCATCTACCAAGACA----TATATGCAATAGTTTAAAT
gi|20 : TC-CATTGTTTGTATAGATCATAACCTAATTT-GGTCAGATAA--AGTTACGAGAAATACAA----GAATC----ATACTGGATCGGCATA-CTGAACACAATTCAACAATTTGACTTCAACAAAGGGGATGATGTAtcagttgca
gi|21 : GCATCGATCCGACGTACTT---C-------CTCGTCATATTACCAGTGGCTGAT----CAA----TTGCT----CTCCGCAAGAC-ATG-T----------AT-----GTTGTTTGTACAGATCACAACCCCACTT-AATCAGACGAAA
gi|22 : TAGTTTAAATCTTACCCACACATTTCTACTCAATTTACAT--GTTTTGTTCAATATGATGCTTTGACTAAATGTCGGCGTTCACGAATATGTCTTCAGCAA-ACTTTTTTGtgtg
gi|23 : TATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCATTTTACACATGTTTT
gi|24 : AAATGTCGGCGTTCACGAATAAGTCTTCAACAA-ACTTTTTTG
gi|3 : GAAAAACAACACTTACTATCGGTACCAATAAAAAAACCCAGCCATGGCTTCGTTTCATTGACGAAATTGACATGAAATG-GAGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACC--CAGACAGCCACTAATATTTACTACCC-ACTAGTTGTCATCCCAAACACTGCTGTAGGAACATACCATATAGTTTAGCACTACGCAATATGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCACAGGAGCTGTCACAACATTTACTCAATAGGAGCTACACCAAAGCTGCCATTGATTCTGCTATTACGAGAGCTAGAGAACAAAACAGAACAGATATTCTACAACAAAAAAATAAAACACACGACCCTGCAA---AGTATCTA-----CCATTAA----------TTTGTAC--------TTACATACCAT-----------------CCGGACACGCCTGGCGTAAAAAATATATTTTCGAATCACTTGCCCATAATTGAATCTTCAAACCGTCTTAAAAA--TGTTCCCAGAAAAA-AAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCACGATATTCTCGTCCGATCTAAATTAAGCCCGCACCCTAACAATGCCA-AACTAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTG-TTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAACCAAGTAATG--TTGTCTACTTGA----T----GGCTTGCAAACAATGTGAAAAAACAGTATGTCTG-TGAAACG-----AAAACTCCTATTAATCTGAGA-----GTTATCACGTACCGATCCGATGTACTTACCCG-CAA-GCTCGCCAGATCGCCAGTGGCT-AT----CAC----CTATG----CTGCACGGGAC-ATGTTTTTCTCGGAGATATC-CATTATCTGCATAGATCATAACCCTAATT-GGTCAGACGAGAAG---TGCAAAATACGA----TAATC----GTACTGGATCCGCAGA-TTAAATACTTTTCAACGTTTTGGCTTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATC
gi|4 : AAGGATGATAAACTGGTAG--TGGACGTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAGCACTGTTTTAGGAACATACCATATATCTTAGCACTACGCATTAAAAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCCCAGGAACTGTCATAACATTTACTCAATAGGAGCTACACCAAAGCAGCCATTGATTCTGCCATATCGAGAGCTCGAGAACAAAACCGAACAGATATTCTACAGTACAAAAATAAAACACTGGACCATTCAACGTCGCGTTGAAGGGTTC----AGTGTTTTATTTTTGTACTGTAGAATTTGAATACCATTTGTACTTGCATACCATCCGGATACTCCTGACGTAAAAAATATAATTTCAAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA--TGTTCCCAGAAAAAACAGCCATTGCCTACAGAAGGCCGAAAAGTCTCCGCGGTATTCTCGTCCGATCTAGGTTGAGCCCGCAACCTACCGATGCCA-AAATAGGACAGTTTGGTCCTTGCAGTTCATCTAGATGCCTAACATGCAAACAAATGCCTG--CCACTAACTG-TTTTAAACAATCAAGGACTGGTCCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGA--------TTTGCAAACAATGTG-AAAAACAGTTTGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCTATCCGATGTACTTACCAA-TAA-GCTCGCCATATCGCCAGTGGCTGAT----CAC----CTACG----CTCCACGGGAC-AGG-TTTTCTCGGAGATATC-AATTATCTGCACAGATCATAACCCTAATT-GGTCAGACGAGAAA---CGCAAAATACGA----GAATC----ATACTGGATCCACAGA-TAAAATACTGTTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATATACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCGACTTACTTATGTTTT-TTCAATATGATGCTATGACTAAATGTGAGCGTTCACGAATATGTCTTCAACAA-ACTTTTT
gi|5 : CTAATGATTGC-ATCCAAGAAAAATAAAATTCACTAATGAAATTTCTAACACAAA-ATATATCTTTCTA--GATACACAGACGCACATCAAGGATGATAAACTGATAG--TGGACTTACATACCAAACCAGCAGCCAGTCATCAGTATATAC-ACCCTAGAAGGTGTCATCCTAATCACTGTTGTCAGAAGATACACTACGGTTTGGCACTAGGCATTAAGAGAA-TTTGCTCAGACCCTCTGACATTCGTAACACGATCGCAGGAACTGTCATAACGTTTACTCACTAGGGGTTACACCAAAGCTGCCATTGATTTTTCTATTTCGAAAGCTAAAGAACAAATCAGGACAGATATCCTGCAGTACAAAAATATGACGCATT-CTCTGAAA---CGCGCCTT-----CC----
gi|6 : ga-A-GCTCACCAGATCATCAGTAGCTTATACTGCACGGGAC-ATGTTTACTGCACGGGAC-ATG-TTTACCCGGAGATGTA-CATTGTCTGTATAGATCATAACCCTATTT-GGTCAGAGGACAAT---CGCAAAATACGA----GAATC----GTATTGGATCCGCAGA-TTAAACACTTTTCAGCCATTTGGGTTCAATAAAGAGGACAATGCACGTGTTATTATACA-AAATGATATACTTCGCCAATGCACCTGCCTATTCA----TATATGCAATAGTTTGA---------AGATAGT--------GT---CATATA--TTGT---ATAT-ATATTA----TATATGTCGGCGTTCACAAACCGGTCTTCAACAACACTT
gi|7 : acagcagcagcttcgttagcagttttga-A-GCTCACCAGATCATCAGTAGCT---------------TATA----CTGCACGGGAC-ATG-TTTACTCGGAGA-ATTACATTGTCTGTATAGATCATAACCCTATTT-GGTCAGAGGAGAAT---CGCAAAATACGA----GAATC----GTATTGGATCCGCAGA-TTAAACACTTTTCAGCCATTTGGCTTCAATAAAGAGGACAATGCACGTGTTGTTATACA-AAATGATATACTTCGCCAGTGCACCTGCCTATTCA----TATATGCAATAGTTTAAAT---------ATAGT--------GT---CATATA--TTGT---ATAT-ATATTA----TATATGTCGGCGTTCACAAACCGGTCTTCAACAACACTTc
gi|8 : cagcagcagcttcgttagcagttttga-TCTTCTCGGAGATATC-CATTATCTGTTTAGATCATAGCCCTAATT-GGTCAGGCGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACATAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACCCAAACAGTTCTACTCAATTTAC--ATGTTTTGTTCAATATGATGCTATGACTAAATGTCGACGTTCACAAATATGTCTTCAACAA-ACTT
gi|9 : CGATGCCTTAAAT--GACAGCCACCCCCTTTTCGTTCATCCAGATGCGCAATATGCTAACAAATGCCTTCTTCACTAACTGTTTC-AATCAATCAACGACTGATGCAATAATATATATCT----TCTAACGCCAGCTGCAAAACAAGT--TGGTTTG-CTGCCT----ATT----GGCTTGCAAG-AGTGAG-AAAAACAGTATGTCGA-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----ATTAACACGCTATGATCCGATGTACTTAACCG-TAA-GCTTACCAGATCACCAGTGGCTgt
Alignments
lowQualScore : 1 3333333 2222 222 555555555555555 11 11 444444444444 11 1 1 111 111 11 111 5555555555555555555555 33333333 77777777777777777 22 11 2 11 333333333 11111 11111 222222 1111111 1111 1111 1111
lowQualScore : 5 1 1 1111111 1 1 1 4444 111 0 0 222222222222222 0 2 2 3333 1 1 1 33 2 33 1 444444444444 1 1 1 1 1 1 3 33 2 0 0 0 777 1 444 1 0 8 0 11 99 5 6 8 8 1 0 444 4444444444444444444444 66666666 00000000000000000 0 55 99 8 0 11 0 0 0 11 99 1 3 999999999 6 6 66666 66666 000000 3333333 0000 0 0000 0 4 4 3 1 4 777 8888 8888 4 0 2 1 1 0000 1 1 0 1 1 3 2 3 0 8
lowQualScore : . . . ....... . . . .... ... . . ............... . . . .... . . . .. . .. . ............ . . . . . . . .. . . . . ... . ... . . . . .. .. . . . . . . ... ...................... ........ ................. . .. .. . . .. . . . .. .. . . ......... . . ..... ..... ...... ....... .... . .... . . . . . . ... .... .... . . . . . .... . . . . . . . . . .
lowQualScore : 5 0 0 5555555 0 0 0 5555 000 7 7 333333333333333 8 5 5 5555 2 2 2 88 5 22 0 555555555555 0 0 0 0 0 0 7 88 5 0 0 8 555 4 000 4 8 0 8 00 22 0 0 0 0 0 8 000 9999999999999999999999 22222222 00000000000000000 2 55 88 0 8 00 4 8 8 00 22 0 2 555555555 7 7 77777 77777 999999 5555555 6666 1 6666 2 4 0 6 0 0 888 5555 5555 0 3 5 2 6 6666 1 9 1 9 9 2 5 2 1 9
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGNTATCTCGTCNTTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAANTNANATTATAATAAAACAAACAGCCGATAAAGGCTCAGCGGTCGTTGTGACGG--A--GAGACAA-T-ATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTTAGATCATGATC--CCACACTTGAATTCGCA-GAAGAGGTTTCAACAACTGTTAACGGAATGTTCGATAATGGCTACATCACTGAAGAGAANAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCCTCTTCCAAANATANACANACCTGGCAACCCAGGCCGCCCCATTGTGTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCTAATTCTAAGNTGCAATNATTCTNAATTCAATGGTAAACACTACCTACAAGTACAAGGTACGGCAATGGGTACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCGCACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAACACTGTTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCNCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGCAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTGCATACCAT-----------------CCGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACNAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACCCTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGACT----GGCTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCGATCCGATGTACTTACCCG-T-A-GCTCGCCAGATCGCCAGTGGCTGAT----CAC----CTATG----CTCCACGGGAC-ATG-TTTTCTCGGAGATATC-CATTGTCTGTATAGATCATAACCCTANTT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTTTG
Reference ( family-3016 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGNTATCTCGTCNTTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAANTNANATTATAATAAAACAAACAGCCGATAAAGGCTCAGCGGTCGTTGTGACGG--A--GAGACAA-T-ATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTTAGATCATGATC--CCACACTTGAATTCGCA-GAAGAGGTTTCAACAACTGTTAACGGAATGTTCGATAATGGCTACATCACTGAAGAGAANAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCCTCTTCCAAANATANACANACCTGGCAACCCAGGCCGCCCCATTGTGTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCTAATTCTAAGNTGCAATNATTCTNAATTCAATGGTAAACACTACCTACAAGTACAAGGTACGGCAATGGGTACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCGCACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAACACTGTTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCNCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGCAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTGCATACCAT-----------------CCGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACNAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACCCTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGACT----GGCTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCGATCCGATGTACTTACCCG-T-A-GCTCGCCAGATCGCCAGTGGCTGAT----CAC----CTATG----CTCCACGGGAC-ATG-TTTTCTCGGAGATATC-CATTGTCTGTATAGATCATAACCCTANTT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTTTG
gi|1 : GCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAA-GTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGAAAATGATATCTCGTCATTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAACTGATATTATAATAAAACA---AGCCGATAAAGGCTCAGCGGTCGTTGTGATGGACA--GAGACAACT-ATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTAAGATCATGATC--CTACACTTGAATTCGCA-GAAAAGGTTTGAACAACTGTTAATGGAATATTCGATAATGGCTACATCACTGAAGAGAAAAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCTTCTTCCAAAGATACACAAACCTGGCAACCCAGGCCGTCCCATTGTGTCAGCA
gi|1 : caaatcatttagtagacgtctacggcttaagtcacattttacaaaacctgaaccaaaatatgataacagtaaagcagatgacaccattcgatggtctgtcgcagtcaaatatatctccatcgggcatagatcacgtcaacaattcactggcattaTACCCTAATTCTAAGATGCAATCATTCTTAATTTAATGGTAAACACTACCTACATGTACAAGGTACGGCAATGGGCACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACACTGGCATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CGTACT---TCTCGCCAATGATATACACCCAATTA---TAAACTTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAATCCACAGACAGCCACCTATATCTACAACAC-ACTAGTTGTCATCCCAAACACTGCTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAAATTA-TCTGTTCAGACCCTCTGACATTCGTACCACGATCACAGGAACTGTCGCAACATTTACACAATAGAGGCTACAAGAAAGTTGCCATTGATTCTCCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACACTGCAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTACATACCAT-----------------CCGGATATTCCTGACGTAAAAAATATAATTTCAAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACCAGTCATCGCCTACAGAAGGCCGAAAAATCTCCGCGATATTCTCGTCCGATCTAGATTAAGCTCGCACCTTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGAAGTTCACCTAGACGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTTAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGACTTGACGACTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCACTTAATCTGGGA-----GTTTACTCACACCGATCCGATGTACATACCCG-T------------ATCGCCAGTGGCTGAT----CAC----CGATG----CTCCACGGGAC-ATG-TTTTGTCGGAGATATC-CATTATCTGCATAGATCATAACCCTAATT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTGTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAAAACACAATTATATGCAATAGTTTAAATCTTACTCGGACAGTTCTACTCATTTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCAGCGTTCACAAATAGGTCTTCAACAA-ACTTTTTTGaatgggcatcccacagaaagaatttctgagttcgttgattttcacctgaaaccccctgtacgcaatatgccatcatttattcaagacaccacggattacataaggaaagttgaatccgagaatagtatcgctcctgaaactcttacggtctcgatggatgtgacatcactatatactaatataccacacgatgatggtatacttgcgtgcaaagaaatatggaagagtaggacatatcaacaaccacccaccgaatatcttgttgaattacttaccctaattctaagatgcaatcattcttaatttaatggtaaacactacctacatgtacaaggtacggcaatgggcaccaagatggcaccttcctatgccaacattttcatgggtaaactcgaaaaacaactcttactatcggtaccaataaaaccccagtcatggcttcgtttcattgacgacactggcatgaaatggtgtgacagtttcgaaaaccttcaaagtttcgtacttctcgccaatgatatacacccaattataaacttcaccagtgaaatttctaacacgaaacacatatttctagatacacagtcacacatcaaggatgataaactggtagtggacttacacaccaaatccacagacagccacctatatctacaacacactagttgtcatcccaaacactgctgtaggaacataccatatagcttagcactacgcattaaaattatctgttcagaccctctgacattcgtaccacgatcacaggaactgtcgcaacatttacacaatagaggctacaagaaagttgccattgattctcccatttcgagagctagagaacaaaaccgaacagatattctacaatacaaaaataaaacacacgacactgcaacgcgtctaccatttgtacttacataccatccggatattcctgacgtaaaaaatataatttcaaatcactggcccataattgaatcttcaaaccgtcttaaaaattgttcccagaaaaaccagtcatcgcctacagaaggccgaaaaatctccgcgatattctcgtccgatctagattaagctcgcaccttaccgatgccaaaataggacagtcaggcccttgaagttcacctagacgcctaacatgcaaacaaatgcctgtcactaactgttttttaacaatcaaggactggtgcaactatacatctgagatctaacgccaactgtaaaacaagtaatgttgtctacttgatgacttgacgacttgcaaacaatgtgaaaaacagtatgtcggtgaaacgaaaactccacttaatctgggagtttactcacaccgatccgatgtacatacccgtatcgccagtggctgatcaccgatgctccacgggacatgttttgtcggagatatccattatctgcatagatcataaccctaattggtcagacgagaagcgcaaaatacgagaatcgtactggatccgcagattaaatactattcaaactgttggcctcaacaaaggggacgatgtacgtgttgctatacacaaataatatacctcgccagtgcatctaccaaaacacaattatatgcaatagtttaaatcttactcggacagttctactcattttacatatgttttgttcaatatgatgctatgactaaatgtcagcgttcacaaataggtcttcaacaaacttttttg
gi|10 : caaatcatttagtagacgtctacggcttaagtcacattttacaaaacctgaaccaaaatatgataacagtaaagcagatgacaccattcgatggtctgtcgcagtcaaatatatctccatcgggcatagatcacgtcaacaattcactggcattagccgagaataccaatgttcagtacacacaatttaaactaaaagtaaatggcagccaccaagacaatccagagaacttaaaacatttattcaaagtgtcgaaaatgatatctcgtcatttcagccgaagcgaaaccatcacaacaacatatcaaagtctgagaaaaatgcactttgtgccttaaaacagaactgatattataataaaacaagccgataaaggctcagcggtcgttgtgatggacagagacaactatatttcagaggcagaaagacaactgaatgaccaatcctattacattcagtaagatcatgatcctacacttgaattcgcagaaaaggtttgaacaactgttaatggaatattcgataatggctacatcactgaagagaaaaaagattatttacttcctgagaattccaaagccgggctgttctatcttcttccaaagatacacaaacctggcaacccaggccgtcccattgtgtcagcaaatgggcatcccacagaaagaatttctgagttcgttgattttcacctgaaaccccctgtacgcaatatgccatcatttattcaagacaccacggattacataaggaaagttgaatccgagaatagtatcgctcctgaaactcttacggtctcgatggatgtgacatcactatatactaatataccacacgatgatggtatacttgcgtgcaaagaaatatggaagagtaggacatatcaacaaccacccaccgaatatcttgttgaattactAAAGTACGATTCTGGATCTCGTATACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTACTATACACAAATAATATACTTCGCCAGCGCATCAACCAATACA----TATATGCAATAGTTTTAATCCTACTCGCACAATTCCACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTT
gi|11 : ACTACAAAATAAGTAGCA--TGGTTTACTTAATGACT--------TGCATACAGCGTG-ACAAGCACTACGGGGGATGGAGGGGATTTAAAACTCAGCTTAATCTTAGACGACAG--AACATGCACTAATCCGTTCTACTAACCAA-T-ACGTTCGCCAGATGACCAATGGCTG-T----CAC----GTGTG----CTCCACAAGACAAAG-TTTTCTCAGAAAAATC-TAT
gi|12 : AT-ATA-TATTCTCAGAGATATC-AAT-GTTTATATAGAGCTTAACCCTATTTTGGTCAAACGAGACA---CGCA-----C-A----GATTC----GTACTGGATGCGTAGACTTAAAAA--AT-CAA---TTTGGCCTCACCAAAGGATACGATTTATGCATTTATATTCACAAATgat
gi|13 : TACCTTAATTCTAAATTGCAATAATTTTGAATTCAATGATAAACACTACCTACAAGTAATAGGTACGACAATGGGTACCACGATGGCATCTTCCTATGCCAACATTGCCATTGTTAAACTTGAAAATCATCTCTTACAATCGTTACCTAT--AAAACCCCAGTTATGGCTTCGCTTCATTGACGActactgattcatatactagtatgcagtgcattaaagatagtgtc
gi|14 : ataacGAAAATGGCTCAGTGGTCGTTGTGATGG--A------------------------CAGA----CAACTGAATGACCAGTCTTGTTTCATTCAGTTAGGTCATGATC--CCACATTTGAATTCGC----AGAGGTTTCAACAACTGTTTAC
gi|14 : ACTGTTTACTTCCTGAGAATTCCAA------------TTATTCTCTTTTAAATATAAACATACCTGGCAACCCAGGCCACTCCATTGTGTCAGCAttcctgagaattccaattattctcttttaaatataaacatacctggcaacccaggccactccattgtgtcagca
gi|15 : gaaaatggctcagtggtcgttgtgatggacagacaactgaatgaccagtcttgtttcattcagttaggtcatgatcccacatttgaattcgcagaggtttcaacaTGA-ACGAAATGTGTGTGACAACTTCAAAAGCCTGCAATTTTTGCTTGTTAAATGTCGCTTATGCTTTTCATTCTTCTA---TAAAAGTCACAAGTGAG-TTTCAAACACCAGTAC-CATACTTTCACGGATACTCAGTCGTATATCAAGGACGACAATCT--TAGACAGGACATGCACAACA
gi|16 : tcaccaactgTAAAACAGAAATTAGATT----TAAAACAAACAGCCGATAAAGGCTGAGTGGTCGTTGTGACAG--AATGAGATAA-TAATATCTCATATGCAGAAATGTAACACAATGACCAATCCTTTTGCATTCAATTAGATGTTTATCATCTAAACTTGACTTC-CAGGAGGATGTTTCACCAACTGTGAACGAAATG
gi|17 : AGACTA-TTATATTTCAGAGGCAGAAAGACAAATGAATGACCAATCCTATTACATTCAGTCAGATCATGATC--CCACACTTGAATTCGCA-GAAAAGGTTTCAACAAATGTTAATCGAATGTTCGATAATGGCTACATCATTAAAGAGAATAAAGATTATTTACTTCCTGAGAATT
gi|18 : ACGTGTTACTATACACAAATAATATACTTCGCCAGTGCATCAAGCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTGTTTT
gi|19 : GCCGAGAATACCAATGTTCAGTATACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGTTATCTCGTCCTTTCAGTCGAAGCGAAA-------AACAACA
gi|2 : CTTCCTACAAGTACATGGTACGGCAATGGGTACAAAGATGGCACCTTCCTATGCCAACATTTTCATGAGTAAACTAGAAAAACAATTCTTAGTATCGGTACAAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTAACAGTTTCGAAAACCTTCAAAGTTT-CCTACA---TCTCGCCAATGATTTCCACCAAACCA---TAAAATTCACTAGTGAAATTTCTAACACGAA-ACACATATTTCTT--GATACA--GTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACAACAAATCCACAGACAGCAATCAGTATCTACTACCC-ACTAGTTGTAATTCCAAACACTTTTGTAGGAACATACCATATAGCTTAGCACTAAGCATTAAGAAAAATCTGTTCAGACCCTCTGACATTCGTAACATGATCCCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAAACGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGTAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTGCATACCAT-----------------CAGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTAGCCCATAATTGAATCTTCAAACCGTCTTAAAAACTTTTCCCCAGAAAAACGAGTCATCGCCTACAGAAGGTCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACACTACCGATGCCA-AAATAGGACAACCAGGACCTTGCAATTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTG-TTTTAAACAATCAAGGACAGGTGCA-------ACATCTGAGATCTAACGCCAACTATAAAACAAGTAATG--TTGTCTACTTGATGA--------ATTGCAAACAATGTG-AAAAACAG--TGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAAAACGCATCGATCCGATGTACTTACCCGTT-A-GCTCGCCAGAACGCCAGTGGCTTAT----CAC----CTATT----CTCCAC-GAAC-ATG-TTTTCTCGGAGATATC-CATTATCTGCATAGATAATAAACCTAATT-GGTCAGACGAGAAG---TGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTTTTGGCCTCAACAAGGGGGACGATGTACGAGTTGCTATACACAAATAATATACCTTGCCAGTGCATCTACCAAGACA----TATATGCAATAGTTTAAAT
gi|20 : TC-CATTGTTTGTATAGATCATAACCTAATTT-GGTCAGATAA--AGTTACGAGAAATACAA----GAATC----ATACTGGATCGGCATA-CTGAACACAATTCAACAATTTGACTTCAACAAAGGGGATGATGTAtcagttgca
gi|21 : GCATCGATCCGACGTACTT---C-------CTCGTCATATTACCAGTGGCTGAT----CAA----TTGCT----CTCCGCAAGAC-ATG-T----------AT-----GTTGTTTGTACAGATCACAACCCCACTT-AATCAGACGAAA
gi|22 : TAGTTTAAATCTTACCCACACATTTCTACTCAATTTACAT--GTTTTGTTCAATATGATGCTTTGACTAAATGTCGGCGTTCACGAATATGTCTTCAGCAA-ACTTTTTTGtgtg
gi|23 : TATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCATTTTACACATGTTTT
gi|24 : AAATGTCGGCGTTCACGAATAAGTCTTCAACAA-ACTTTTTTG
gi|3 : GAAAAACAACACTTACTATCGGTACCAATAAAAAAACCCAGCCATGGCTTCGTTTCATTGACGAAATTGACATGAAATG-GAGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACC--CAGACAGCCACTAATATTTACTACCC-ACTAGTTGTCATCCCAAACACTGCTGTAGGAACATACCATATAGTTTAGCACTACGCAATATGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCACAGGAGCTGTCACAACATTTACTCAATAGGAGCTACACCAAAGCTGCCATTGATTCTGCTATTACGAGAGCTAGAGAACAAAACAGAACAGATATTCTACAACAAAAAAATAAAACACACGACCCTGCAA---AGTATCTA-----CCATTAA----------TTTGTAC--------TTACATACCAT-----------------CCGGACACGCCTGGCGTAAAAAATATATTTTCGAATCACTTGCCCATAATTGAATCTTCAAACCGTCTTAAAAA--TGTTCCCAGAAAAA-AAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCACGATATTCTCGTCCGATCTAAATTAAGCCCGCACCCTAACAATGCCA-AACTAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTG-TTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAACCAAGTAATG--TTGTCTACTTGA----T----GGCTTGCAAACAATGTGAAAAAACAGTATGTCTG-TGAAACG-----AAAACTCCTATTAATCTGAGA-----GTTATCACGTACCGATCCGATGTACTTACCCG-CAA-GCTCGCCAGATCGCCAGTGGCT-AT----CAC----CTATG----CTGCACGGGAC-ATGTTTTTCTCGGAGATATC-CATTATCTGCATAGATCATAACCCTAATT-GGTCAGACGAGAAG---TGCAAAATACGA----TAATC----GTACTGGATCCGCAGA-TTAAATACTTTTCAACGTTTTGGCTTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATC
gi|4 : AAGGATGATAAACTGGTAG--TGGACGTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAGCACTGTTTTAGGAACATACCATATATCTTAGCACTACGCATTAAAAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCCCAGGAACTGTCATAACATTTACTCAATAGGAGCTACACCAAAGCAGCCATTGATTCTGCCATATCGAGAGCTCGAGAACAAAACCGAACAGATATTCTACAGTACAAAAATAAAACACTGGACCATTCAACGTCGCGTTGAAGGGTTC----AGTGTTTTATTTTTGTACTGTAGAATTTGAATACCATTTGTACTTGCATACCATCCGGATACTCCTGACGTAAAAAATATAATTTCAAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA--TGTTCCCAGAAAAAACAGCCATTGCCTACAGAAGGCCGAAAAGTCTCCGCGGTATTCTCGTCCGATCTAGGTTGAGCCCGCAACCTACCGATGCCA-AAATAGGACAGTTTGGTCCTTGCAGTTCATCTAGATGCCTAACATGCAAACAAATGCCTG--CCACTAACTG-TTTTAAACAATCAAGGACTGGTCCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGA--------TTTGCAAACAATGTG-AAAAACAGTTTGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCTATCCGATGTACTTACCAA-TAA-GCTCGCCATATCGCCAGTGGCTGAT----CAC----CTACG----CTCCACGGGAC-AGG-TTTTCTCGGAGATATC-AATTATCTGCACAGATCATAACCCTAATT-GGTCAGACGAGAAA---CGCAAAATACGA----GAATC----ATACTGGATCCACAGA-TAAAATACTGTTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATATACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCGACTTACTTATGTTTT-TTCAATATGATGCTATGACTAAATGTGAGCGTTCACGAATATGTCTTCAACAA-ACTTTTT
gi|5 : CTAATGATTGC-ATCCAAGAAAAATAAAATTCACTAATGAAATTTCTAACACAAA-ATATATCTTTCTA--GATACACAGACGCACATCAAGGATGATAAACTGATAG--TGGACTTACATACCAAACCAGCAGCCAGTCATCAGTATATAC-ACCCTAGAAGGTGTCATCCTAATCACTGTTGTCAGAAGATACACTACGGTTTGGCACTAGGCATTAAGAGAA-TTTGCTCAGACCCTCTGACATTCGTAACACGATCGCAGGAACTGTCATAACGTTTACTCACTAGGGGTTACACCAAAGCTGCCATTGATTTTTCTATTTCGAAAGCTAAAGAACAAATCAGGACAGATATCCTGCAGTACAAAAATATGACGCATT-CTCTGAAA---CGCGCCTT-----CC----
gi|6 : ga-A-GCTCACCAGATCATCAGTAGCTTATACTGCACGGGAC-ATGTTTACTGCACGGGAC-ATG-TTTACCCGGAGATGTA-CATTGTCTGTATAGATCATAACCCTATTT-GGTCAGAGGACAAT---CGCAAAATACGA----GAATC----GTATTGGATCCGCAGA-TTAAACACTTTTCAGCCATTTGGGTTCAATAAAGAGGACAATGCACGTGTTATTATACA-AAATGATATACTTCGCCAATGCACCTGCCTATTCA----TATATGCAATAGTTTGA---------AGATAGT--------GT---CATATA--TTGT---ATAT-ATATTA----TATATGTCGGCGTTCACAAACCGGTCTTCAACAACACTT
gi|7 : acagcagcagcttcgttagcagttttga-A-GCTCACCAGATCATCAGTAGCT---------------TATA----CTGCACGGGAC-ATG-TTTACTCGGAGA-ATTACATTGTCTGTATAGATCATAACCCTATTT-GGTCAGAGGAGAAT---CGCAAAATACGA----GAATC----GTATTGGATCCGCAGA-TTAAACACTTTTCAGCCATTTGGCTTCAATAAAGAGGACAATGCACGTGTTGTTATACA-AAATGATATACTTCGCCAGTGCACCTGCCTATTCA----TATATGCAATAGTTTAAAT---------ATAGT--------GT---CATATA--TTGT---ATAT-ATATTA----TATATGTCGGCGTTCACAAACCGGTCTTCAACAACACTTc
gi|8 : cagcagcagcttcgttagcagttttga-TCTTCTCGGAGATATC-CATTATCTGTTTAGATCATAGCCCTAATT-GGTCAGGCGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACATAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACCCAAACAGTTCTACTCAATTTAC--ATGTTTTGTTCAATATGATGCTATGACTAAATGTCGACGTTCACAAATATGTCTTCAACAA-ACTT
gi|9 : CGATGCCTTAAAT--GACAGCCACCCCCTTTTCGTTCATCCAGATGCGCAATATGCTAACAAATGCCTTCTTCACTAACTGTTTC-AATCAATCAACGACTGATGCAATAATATATATCT----TCTAACGCCAGCTGCAAAACAAGT--TGGTTTG-CTGCCT----ATT----GGCTTGCAAG-AGTGAG-AAAAACAGTATGTCGA-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----ATTAACACGCTATGATCCGATGTACTTAACCG-TAA-GCTTACCAGATCACCAGTGGCTgt
blockSeqs : A T C . A T G . AAC AATGAGATAATA T T AATG G T T AT G AG T . T A T T A G T AA C T G AAA T AAA A T CG AC C T T A C CGT AGGGTTCAGTGTTTTATT TGTAGAAT TTGTACTTGCATACCAT CT CG T CT T AA GT A T TTGGC A A GATTT CGACA ATAC TATACTG GGGA TTTA A T A T T TTA TTCT TCGT C C T C . C T T T T G T C
blockSeqs : A G G AAGA T G T . G A A . C . . . C . T . . . C T . . A . CCATTAA . . . AC . . . . . G T TGGC . . . . GTTA TAT . . . . . A . . . . . A T C . C T T T T G T C
blockSeqs : . . . A A C . . . . . . . . C . C . . . A T . . C . CCA . . . A . . . . . G T CT . . . . GCAA GAT . . . . . T . . . . . C A C . C T T T T G T .
blockSeqs : A . T . . . . . . . G . . . . . . G . A . . . . ATAA GAT . . . . . C . . . . . C T C . C T T T T G T .
blockSeqs : . . . . T . . . . GTAA GT . . . . . A . . . . . C T C . C T T T T G T .
blockSeqs : . AT . . . . . A . . . . . C A C . G T T T . . . .
blockSeqs : . . . . . . T . . . . . C A T . A . . . . . . .
blockSeqs : . . . T . . . . . A T . . . . . .
blockSeqs : . . A . . . . . . .
blockSeqs : .
blockSeqCons : TG******* GTAA** ****
originalCons : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGNTATCTCGTCNTTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAANTNANATTATAATAAAACAAACAGCCGATAAAGGCTCAGCGGTCGTTGTGACGG--A--GAGACAA-T-ATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTTAGATCATGATC--CCACACTTGAATTCGCA-GAAGAGGTTTCAACAACTGTTAACGGAATGTTCGATAATGGCTACATCACTGAAGAGAANAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCCTCTTCCAAANATANACANACCTGGCAACCCAGGCCGCCCCATTGTGTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCTAATTCTAAGNTGCAATNATTCTNAATTCAATGGTAAACACTACCTACAAGTACAAGGTACGGCAATGGGTACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCGCACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAACACTGTTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCNCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGCAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTGCATACCAT-----------------CCGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACNAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACCCTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGACT----GGCTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCGATCCGATGTACTTACCCG-T-A-GCTCGCCAGATCGCCAGTGGCTGAT----CAC----CTATG----CTCCACGGGAC-ATG-TTTTCTCGGAGATATC-CATTGTCTGTATAGATCATAACCCTANTT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTTTG
finalCons : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGNTATCTCGTCNTTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAANTNANATTATAATAAAACAAACAGCCGATAAAGGCTCAGCGGTCGTTGTGACGG--A--GAGACAA-T-ATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTTAGATCATGATC--CCACACTTGAATTCGCA-GAAGAGGTTTCAACAACTGTTAACGGAATGTTCGATAATGGCTACATCACTGAAGAGAANAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCCTCTTCCAAANATANACANACCTGGCAACCCAGGCCGCCCCATTGTGTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCTAATTCTAAGNTGCAATNATTCTNAATTCAATGGTAAACACTACCTACAAGTACAAGGTACGGCAATGGGTACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAAT--AAAACCCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCGCACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAACACTGTTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCNCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGCAA---CGCGTCTA-----CC----A----------TTTGTAC--------TTGCATACCAT-----------------CCGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACNAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACCCTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAATG--TTGTCTACTTGATGATG-------TTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCGATCCGATGTACTTACCCGTAA--GCTCGCCAGATCGCCAGTGGCTGAT----CAC----CTATG----CTCCACGGGAC-ATG-TTTTCTCGGAGATATC-CATTGTCTGTATAGATCATAACCCTANTT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTTTG
Alignments
lowQualScore : 1 3333333 2222 222 555555555555555 11 11 444444444444 11 1 1 111 111 11 111 22222 4444444444444444 33333333 77777777777777777 111 11 1 1 11 111 555555555 11111 11111 1111111 1111 1111 1111
lowQualScore : 5 1 1 1111111 1 1 1 4444 111 0 0 222222222222222 0 2 2 3333 1 1 1 33 2 33 1 444444444444 1 1 1 1 1 1 3 33 2 0 0 0 777 1 444 1 0 8 0 11 99 6 8 8 1 0 444 00000 7777777777777777 66666666 00000000000000000 0 666 99 8 0 11 0 0 0 11 111 555555555 6 6 66666 66666 1 2 3333333 0000 0 0000 0 4 4 3 1 4 777 8888 8888 4 0 2 1 1 0000 1 1 0 1 1 3 2 3 0 8
lowQualScore : . . . ....... . . . .... ... . . ............... . . . .... . . . .. . .. . ............ . . . . . . . .. . . . . ... . ... . . . . .. .. . . . . . ... ..... ................ ........ ................. . ... .. . . .. . . . .. ... ......... . . ..... ..... . . ....... .... . .... . . . . . . ... .... .... . . . . . .... . . . . . . . . . .
lowQualScore : 5 0 0 5555555 0 0 0 5555 000 7 7 333333333333333 8 5 5 5555 2 2 2 88 5 22 0 555555555555 0 0 0 0 0 0 7 88 5 0 0 8 555 4 000 4 8 0 8 00 22 0 0 0 0 8 000 00000 0000000000000000 22222222 00000000000000000 2 555 88 0 8 00 6 6 8 00 777 888888888 7 7 77777 77777 7 0 5555555 6666 1 6666 2 4 0 6 0 0 888 5555 5555 0 3 5 2 6 6666 1 9 1 9 9 2 5 2 1 9
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGNTATCTCGTCNTTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAANTNANATTATAATAAAACAAACAGCCGATAAAGGCTCAGCGGTCGTTGTGACGG--A--GAGACAA-T-ATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTTAGATCATGATC--CCACACTTGAATTCGCA-GAAGAGGTTTCAACAACTGTTAACGGAATGTTCGATAATGGCTACATCACTGAAGAGAANAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCCTCTTCCAAANATANACANACCTGGCAACCCAGGCCGCCCCATTGTGTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCTAATTCTAAGNTGCAATNATTCTNAATTCAATGGTAAACACTACCTACAAGTACAAGGTACGGCAATGGGTACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAATAAAAC--CCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCGCACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAACACTGTTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCNCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGCAA---CGCGTCTA-----CCA----------TT----TGTAC--------TTGCATACCAT-----------------CCGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACNAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACCCTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAA---TGTTGTCTACTTGATGA--C------TTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCGATCCGATGTACTTACCCGTAAGCTCGCCAGATCGCCAGTGGCTGAT----CAC----CTATG----CTCCACGGGAC-ATG-TTTTCTCGGAGATATC-CATTGTCTGTATAGATCATAACCCTANTT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTTTG
Reference ( family-3016 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGNTATCTCGTCNTTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAANTNANATTATAATAAAACAAACAGCCGATAAAGGCTCAGCGGTCGTTGTGACGG--A--GAGACAA-T-ATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTTAGATCATGATC--CCACACTTGAATTCGCA-GAAGAGGTTTCAACAACTGTTAACGGAATGTTCGATAATGGCTACATCACTGAAGAGAANAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCCTCTTCCAAANATANACANACCTGGCAACCCAGGCCGCCCCATTGTGTCAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCTAATTCTAAGNTGCAATNATTCTNAATTCAATGGTAAACACTACCTACAAGTACAAGGTACGGCAATGGGTACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAATAAAAC--CCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCGCACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAACACTGTTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCNCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGCAA---CGCGTCTA-----CCA----------TT----TGTAC--------TTGCATACCAT-----------------CCGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACNAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACCCTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTAAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAA---TGTTGTCTACTTGATGA--TG-----TTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCGATCCGATGTACTTACCCGTAAGCTCGCCAGATCGCCAGTGGCTGAT----CAC----CTATG----CTCCACGGGAC-ATG-TTTTCTCGGAGATATC-CATTGTCTGTATAGATCATAACCCTANTT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTTTG
gi|1 : GCCGAGAATACCAATGTTCAGTACACACAATTTAAACTAAAA-GTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGAAAATGATATCTCGTCATTTCAGCCGAAGCGAAACCATCACAACAACATATCAAAGTCTGAGAAAAATGCACTTTGTGCCTTAAAACAGAACTGATATTATAATAAAACA---AGCCGATAAAGGCTCAGCGGTCGTTGTGATGGACA--GAGACAACT-ATATTTCAGAGGCAGAAAGACAACTGAATGACCAATCCTATTACATTCAGTAAGATCATGATC--CTACACTTGAATTCGCA-GAAAAGGTTTGAACAACTGTTAATGGAATATTCGATAATGGCTACATCACTGAAGAGAAAAAAGATTATTTACTTCCTGAGAATTCCAAAGCCGGGCTGTTCTATCTTCTTCCAAAGATACACAAACCTGGCAACCCAGGCCGTCCCATTGTGTCAGCA
gi|1 : caaatcatttagtagacgtctacggcttaagtcacattttacaaaacctgaaccaaaatatgataacagtaaagcagatgacaccattcgatggtctgtcgcagtcaaatatatctccatcgggcatagatcacgtcaacaattcactggcattaTACCCTAATTCTAAGATGCAATCATTCTTAATTTAATGGTAAACACTACCTACATGTACAAGGTACGGCAATGGGCACCAAGATGGCACCTTCCTATGCCAACATTTTCATGGGTAAACTCGAAAAACAACTCTTACTATCGGTACCAATAAAAC--CCCAGTCATGGCTTCGTTTCATTGACGACACTGGCATGAAATG-GTGTGACAGTTTCGAAAACCTTCAAAGTTT-CGTACT---TCTCGCCAATGATATACACCCAATTA---TAAACTTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAATCCACAGACAGCCACCTATATCTACAACAC-ACTAGTTGTCATCCCAAACACTGCTGTAGGAACATACCATATAGCTTAGCACTACGCATTAAAATTA-TCTGTTCAGACCCTCTGACATTCGTACCACGATCACAGGAACTGTCGCAACATTTACACAATAGAGGCTACAAGAAAGTTGCCATTGATTCTCCCATTTCGAGAGCTAGAGAACAAAACCGAACAGATATTCTACAATACAAAAATAAAACACACGACACTGCAA---CGCGTCTA-----CCA----------TT----TGTAC--------TTACATACCAT-----------------CCGGATATTCCTGACGTAAAAAATATAATTTCAAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-TTGTTCCCAGAAAAACCAGTCATCGCCTACAGAAGGCCGAAAAATCTCCGCGATATTCTCGTCCGATCTAGATTAAGCTCGCACCTTACCGATGCCA-AAATAGGACAGTCAGGCCCTTGAAGTTCACCTAGACGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTTTTAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAA---TGTTGTCTACTTGATGACTTGACGACTTGCAAACAATGTG-AAAAACAGTATGTCGG-TGAAACG-----AAAACTCCACTTAATCTGGGA-----GTTTACTCACACCGATCCGATGTACATACCCGT-----------ATCGCCAGTGGCTGAT----CAC----CGATG----CTCCACGGGAC-ATG-TTTTGTCGGAGATATC-CATTATCTGCATAGATCATAACCCTAATT-GGTCAGACGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTGTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATCTACCAAAACACAATTATATGCAATAGTTTAAATCTTACTCGGACAGTTCTACTCATTTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCAGCGTTCACAAATAGGTCTTCAACAA-ACTTTTTTGaatgggcatcccacagaaagaatttctgagttcgttgattttcacctgaaaccccctgtacgcaatatgccatcatttattcaagacaccacggattacataaggaaagttgaatccgagaatagtatcgctcctgaaactcttacggtctcgatggatgtgacatcactatatactaatataccacacgatgatggtatacttgcgtgcaaagaaatatggaagagtaggacatatcaacaaccacccaccgaatatcttgttgaattacttaccctaattctaagatgcaatcattcttaatttaatggtaaacactacctacatgtacaaggtacggcaatgggcaccaagatggcaccttcctatgccaacattttcatgggtaaactcgaaaaacaactcttactatcggtaccaataaaaccccagtcatggcttcgtttcattgacgacactggcatgaaatggtgtgacagtttcgaaaaccttcaaagtttcgtacttctcgccaatgatatacacccaattataaacttcaccagtgaaatttctaacacgaaacacatatttctagatacacagtcacacatcaaggatgataaactggtagtggacttacacaccaaatccacagacagccacctatatctacaacacactagttgtcatcccaaacactgctgtaggaacataccatatagcttagcactacgcattaaaattatctgttcagaccctctgacattcgtaccacgatcacaggaactgtcgcaacatttacacaatagaggctacaagaaagttgccattgattctcccatttcgagagctagagaacaaaaccgaacagatattctacaatacaaaaataaaacacacgacactgcaacgcgtctaccatttgtacttacataccatccggatattcctgacgtaaaaaatataatttcaaatcactggcccataattgaatcttcaaaccgtcttaaaaattgttcccagaaaaaccagtcatcgcctacagaaggccgaaaaatctccgcgatattctcgtccgatctagattaagctcgcaccttaccgatgccaaaataggacagtcaggcccttgaagttcacctagacgcctaacatgcaaacaaatgcctgtcactaactgttttttaacaatcaaggactggtgcaactatacatctgagatctaacgccaactgtaaaacaagtaatgttgtctacttgatgacttgacgacttgcaaacaatgtgaaaaacagtatgtcggtgaaacgaaaactccacttaatctgggagtttactcacaccgatccgatgtacatacccgtatcgccagtggctgatcaccgatgctccacgggacatgttttgtcggagatatccattatctgcatagatcataaccctaattggtcagacgagaagcgcaaaatacgagaatcgtactggatccgcagattaaatactattcaaactgttggcctcaacaaaggggacgatgtacgtgttgctatacacaaataatatacctcgccagtgcatctaccaaaacacaattatatgcaatagtttaaatcttactcggacagttctactcattttacatatgttttgttcaatatgatgctatgactaaatgtcagcgttcacaaataggtcttcaacaaacttttttg
gi|10 : caaatcatttagtagacgtctacggcttaagtcacattttacaaaacctgaaccaaaatatgataacagtaaagcagatgacaccattcgatggtctgtcgcagtcaaatatatctccatcgggcatagatcacgtcaacaattcactggcattagccgagaataccaatgttcagtacacacaatttaaactaaaagtaaatggcagccaccaagacaatccagagaacttaaaacatttattcaaagtgtcgaaaatgatatctcgtcatttcagccgaagcgaaaccatcacaacaacatatcaaagtctgagaaaaatgcactttgtgccttaaaacagaactgatattataataaaacaagccgataaaggctcagcggtcgttgtgatggacagagacaactatatttcagaggcagaaagacaactgaatgaccaatcctattacattcagtaagatcatgatcctacacttgaattcgcagaaaaggtttgaacaactgttaatggaatattcgataatggctacatcactgaagagaaaaaagattatttacttcctgagaattccaaagccgggctgttctatcttcttccaaagatacacaaacctggcaacccaggccgtcccattgtgtcagcaaatgggcatcccacagaaagaatttctgagttcgttgattttcacctgaaaccccctgtacgcaatatgccatcatttattcaagacaccacggattacataaggaaagttgaatccgagaatagtatcgctcctgaaactcttacggtctcgatggatgtgacatcactatatactaatataccacacgatgatggtatacttgcgtgcaaagaaatatggaagagtaggacatatcaacaaccacccaccgaatatcttgttgaattactAAAGTACGATTCTGGATCTCGTATACTGGATCCGCAGA-TTAAATACTATTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTACTATACACAAATAATATACTTCGCCAGCGCATCAACCAATACA----TATATGCAATAGTTTTAATCCTACTCGCACAATTCCACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTTTTT
gi|11 : ACTACAAAATAAGTAG---CATGGTTTACTTAATGA--C------TTGCATACAGCGTG-ACAAGCACTACGGGGGATGGAGGGGATTTAAAACTCAGCTTAATCTTAGACGACAG--AACATGCACTAATCCGTTCTACTAACCAATACGTTCGCCAGATGACCAATGGCTG-T----CAC----GTGTG----CTCCACAAGACAAAG-TTTTCTCAGAAAAATC-TAT
gi|12 : AT-ATA-TATTCTCAGAGATATC-AAT-GTTTATATAGAGCTTAACCCTATTTTGGTCAAACGAGACA---CGCA-----C-A----GATTC----GTACTGGATGCGTAGACTTAAAAA--AT-CAA---TTTGGCCTCACCAAAGGATACGATTTATGCATTTATATTCACAAATgat
gi|13 : TACCTTAATTCTAAATTGCAATAATTTTGAATTCAATGATAAACACTACCTACAAGTAATAGGTACGACAATGGGTACCACGATGGCATCTTCCTATGCCAACATTGCCATTGTTAAACTTGAAAATCATCTCTTACAATCGTTACCTATAAAAC--CCCAGTTATGGCTTCGCTTCATTGACGActactgattcatatactagtatgcagtgcattaaagatagtgtc
gi|14 : ataacGAAAATGGCTCAGTGGTCGTTGTGATGG--A------------------------CAGA----CAACTGAATGACCAGTCTTGTTTCATTCAGTTAGGTCATGATC--CCACATTTGAATTCGC----AGAGGTTTCAACAACTGTTTAC
gi|14 : ACTGTTTACTTCCTGAGAATTCCAA------------TTATTCTCTTTTAAATATAAACATACCTGGCAACCCAGGCCACTCCATTGTGTCAGCAttcctgagaattccaattattctcttttaaatataaacatacctggcaacccaggccactccattgtgtcagca
gi|15 : gaaaatggctcagtggtcgttgtgatggacagacaactgaatgaccagtcttgtttcattcagttaggtcatgatcccacatttgaattcgcagaggtttcaacaTGA-ACGAAATGTGTGTGACAACTTCAAAAGCCTGCAATTTTTGCTTGTTAAATGTCGCTTATGCTTTTCATTCTTCTA---TAAAAGTCACAAGTGAG-TTTCAAACACCAGTAC-CATACTTTCACGGATACTCAGTCGTATATCAAGGACGACAATCT--TAGACAGGACATGCACAACA
gi|16 : tcaccaactgTAAAACAGAAATTAGATT----TAAAACAAACAGCCGATAAAGGCTGAGTGGTCGTTGTGACAG--AATGAGATAA-TAATATCTCATATGCAGAAATGTAACACAATGACCAATCCTTTTGCATTCAATTAGATGTTTATCATCTAAACTTGACTTC-CAGGAGGATGTTTCACCAACTGTGAACGAAATG
gi|17 : AGACTA-TTATATTTCAGAGGCAGAAAGACAAATGAATGACCAATCCTATTACATTCAGTCAGATCATGATC--CCACACTTGAATTCGCA-GAAAAGGTTTCAACAAATGTTAATCGAATGTTCGATAATGGCTACATCATTAAAGAGAATAAAGATTATTTACTTCCTGAGAATT
gi|18 : ACGTGTTACTATACACAAATAATATACTTCGCCAGTGCATCAAGCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCAATTTACATATGTTTTGTTCAATATGATGCTATGACTAAATGTCGGCGTTCACGAATAGGTCTTCAACAA-ACTGTTTT
gi|19 : GCCGAGAATACCAATGTTCAGTATACACAATTTAAACTAAAAAGTAAATGGCAGCCACCAAGACAATCCAGAGAACTTAAAACATTTATTCAAAGTGTCGGAAATGTTATCTCGTCCTTTCAGTCGAAGCGAAA-------AACAACA
gi|2 : CTTCCTACAAGTACATGGTACGGCAATGGGTACAAAGATGGCACCTTCCTATGCCAACATTTTCATGAGTAAACTAGAAAAACAATTCTTAGTATCGGTACAAATAAAAC--CCCAGTCATGGCTTCGTTTCATTGACGACATTGACATGAAATG-GTGTAACAGTTTCGAAAACCTTCAAAGTTT-CCTACA---TCTCGCCAATGATTTCCACCAAACCA---TAAAATTCACTAGTGAAATTTCTAACACGAA-ACACATATTTCTT--GATACA--GTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACAACAAATCCACAGACAGCAATCAGTATCTACTACCC-ACTAGTTGTAATTCCAAACACTTTTGTAGGAACATACCATATAGCTTAGCACTAAGCATTAAGAAAAATCTGTTCAGACCCTCTGACATTCGTAACATGATCCCAGGAACTGTCACAACATTTACTCAATAGGGGCTACACCAAAGCTGCCATTGATTCTGCCATTTCGAGAGCTAGAGAACAAAAACGAACAGATATTCTACAATACAAAAATAAAACACACGACCCTGTAA---CGCGTCTA-----CCA----------TT----TGTAC--------TTGCATACCAT-----------------CAGGATACTCCTGACGTAAAAAATATAATTTCGAATCACTAGCCCATAATTGAATCTTCAAACCGTCTTAAAAACTTTTCCCCAGAAAAACGAGTCATCGCCTACAGAAGGTCGAAAAGTCTCCGCGATATTCTCGTCCGATCTAGGTTGAGCCCGCACACTACCGATGCCA-AAATAGGACAACCAGGACCTTGCAATTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTG-TTTTAAACAATCAAGGACAGGTGCA-------ACATCTGAGATCTAACGCCAACTATAAAACAAGTAA---TGTTGTCTACTTGATGA---A-----TTGCAAACAATGTG-AAAAACAG--TGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAAAACGCATCGATCCGATGTACTTACCCGTTAGCTCGCCAGAACGCCAGTGGCTTAT----CAC----CTATT----CTCCAC-GAAC-ATG-TTTTCTCGGAGATATC-CATTATCTGCATAGATAATAAACCTAATT-GGTCAGACGAGAAG---TGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTTTTGGCCTCAACAAGGGGGACGATGTACGAGTTGCTATACACAAATAATATACCTTGCCAGTGCATCTACCAAGACA----TATATGCAATAGTTTAAAT
gi|20 : TC-CATTGTTTGTATAGATCATAACCTAATTT-GGTCAGATAA--AGTTACGAGAAATACAA----GAATC----ATACTGGATCGGCATA-CTGAACACAATTCAACAATTTGACTTCAACAAAGGGGATGATGTAtcagttgca
gi|21 : GCATCGATCCGACGTACTT---C-----CTCGTCATATTACCAGTGGCTGAT----CAA----TTGCT----CTCCGCAAGAC-ATG-T----------AT-----GTTGTTTGTACAGATCACAACCCCACTT-AATCAGACGAAA
gi|22 : TAGTTTAAATCTTACCCACACATTTCTACTCAATTTACAT--GTTTTGTTCAATATGATGCTTTGACTAAATGTCGGCGTTCACGAATATGTCTTCAGCAA-ACTTTTTTGtgtg
gi|23 : TATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCATTTTACACATGTTTT
gi|24 : AAATGTCGGCGTTCACGAATAAGTCTTCAACAA-ACTTTTTTG
gi|3 : GAAAAACAACACTTACTATCGGTACCAATAAAAAAACCCAGCCATGGCTTCGTTTCATTGACGAAATTGACATGAAATG-GAGTGACAGTTTCGAAAACCTTCAAAGTTT-CTTACT---TCTCGCTAATGATTTCCACCCAACCA---TAAAATTCACCAGTGAAATTTCTAACACGAA-ACACATATTTCTA--GATACACAGTCACACATCAAGGATGATAAACTGGTAG--TGGACTTACACACCAAACCCA--GACAGCCACTAATATTTACTACCC-ACTAGTTGTCATCCCAAACACTGCTGTAGGAACATACCATATAGTTTAGCACTACGCAATATGAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCACAGGAGCTGTCACAACATTTACTCAATAGGAGCTACACCAAAGCTGCCATTGATTCTGCTATTACGAGAGCTAGAGAACAAAACAGAACAGATATTCTACAACAAAAAAATAAAACACACGACCCTGCAA---AGTATCTA-----CCA----------TTAATTTGTAC--------TTACATACCAT-----------------CCGGACACGCCTGGCGTAAAAAATATATTTTCGAATCACTTGCCCATAATTGAATCTTCAAACCGTCTTAAAAA-T-GTTCCCAGAAAAA-AAGTCATCGCCTACAGAAGGCCGAAAAGTCTCCACGATATTCTCGTCCGATCTAAATTAAGCCCGCACCCTAACAATGCCA-AACTAGGACAGTCAGGCCCTTGCAGTTCACCTAGATGCCTAACATGCAAACAAATGCCTG--TCACTAACTGTTTT-AAACAATCAAGGACTGGTGCAAC--TATACATCTGAGATCTAACGCCAACTGTAAACCAAGTAA---TGTTGTCTACTTGATGG--C------TTGCAAACAATGTGAAAAAACAGTATGTCTG-TGAAACG-----AAAACTCCTATTAATCTGAGA-----GTTATCACGTACCGATCCGATGTACTTACCCGCAAGCTCGCCAGATCGCCAGTGGCT-AT----CAC----CTATG----CTGCACGGGAC-ATGTTTTTCTCGGAGATATC-CATTATCTGCATAGATCATAACCCTAATT-GGTCAGACGAGAAG---TGCAAAATACGA----TAATC----GTACTGGATCCGCAGA-TTAAATACTTTTCAACGTTTTGGCTTCAACAAAGGGGACGATGTACGTGTTGCTATACACAAATAATATACCTCGCCAGTGCATC
gi|4 : AAGGATGATAAACTGGTAG--TGGACGTACACACCAAACCCACAGACAGCCATCAGTATCTACTACCC-ACTAGTTGTCATCCCAAGCACTGTTTTAGGAACATACCATATATCTTAGCACTACGCATTAAAAGAA-TCTGTTCAGACCCTCTGACATTCGTAACACGATCCCAGGAACTGTCATAACATTTACTCAATAGGAGCTACACCAAAGCAGCCATTGATTCTGCCATATCGAGAGCTCGAGAACAAAACCGAACAGATATTCTACAGTACAAAAATAAAACACTGGACCATTCAACGTCGCGTTGAAGGGTTCAGTGTTTTATTTT----TGTACTGTAGAATTTGAATACCATTTGTACTTGCATACCATCCGGATACTCCTGACGTAAAAAATATAATTTCAAATCACTGGCCCATAATTGAATCTTCAAACCGTCTTAAAAA--TGTTCCCAGAAAAAACAGCCATTGCCTACAGAAGGCCGAAAAGTCTCCGCGGTATTCTCGTCCGATCTAGGTTGAGCCCGCAACCTACCGATGCCA-AAATAGGACAGTTTGGTCCTTGCAGTTCATCTAGATGCCTAACATGCAAACAAATGCCTG--CCACTAACTG-TTTTAAACAATCAAGGACTGGTCCAAC--TATACATCTGAGATCTAACGCCAACTGTAAAACAAGTAA---TGTTGTCTACTTGATGA--T------TTGCAAACAATGTG-AAAAACAGTTTGTCGG-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----GTTAACACGCACCTATCCGATGTACTTACCAATAAGCTCGCCATATCGCCAGTGGCTGAT----CAC----CTACG----CTCCACGGGAC-AGG-TTTTCTCGGAGATATC-AATTATCTGCACAGATCATAACCCTAATT-GGTCAGACGAGAAA---CGCAAAATACGA----GAATC----ATACTGGATCCACAGA-TAAAATACTGTTCAACCTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATATACAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACTCACACAGTTCTACTCGACTTACTTATGTTTT-TTCAATATGATGCTATGACTAAATGTGAGCGTTCACGAATATGTCTTCAACAA-ACTTTTT
gi|5 : CTAATGATTGC-ATCCAAGAAAAATAAAATTCACTAATGAAATTTCTAACACAAA-ATATATCTTTCTA--GATACACAGACGCACATCAAGGATGATAAACTGATAG--TGGACTTACATACCAAACCAGCAGCCAGTCATCAGTATATAC-ACCCTAGAAGGTGTCATCCTAATCACTGTTGTCAGAAGATACACTACGGTTTGGCACTAGGCATTAAGAGAA-TTTGCTCAGACCCTCTGACATTCGTAACACGATCGCAGGAACTGTCATAACGTTTACTCACTAGGGGTTACACCAAAGCTGCCATTGATTTTTCTATTTCGAAAGCTAAAGAACAAATCAGGACAGATATCCTGCAGTACAAAAATATGACGCATT-CTCTGAAA---CGCGCCTT-----CC
gi|6 : gaAAGCTCACCAGATCATCAGTAGCTTATACTGCACGGGAC-ATGTTTACTGCACGGGAC-ATG-TTTACCCGGAGATGTA-CATTGTCTGTATAGATCATAACCCTATTT-GGTCAGAGGACAAT---CGCAAAATACGA----GAATC----GTATTGGATCCGCAGA-TTAAACACTTTTCAGCCATTTGGGTTCAATAAAGAGGACAATGCACGTGTTATTATACA-AAATGATATACTTCGCCAATGCACCTGCCTATTCA----TATATGCAATAGTTTGA---------AGATAGT--------GT---CATATA--TTGT---ATAT-ATATTA----TATATGTCGGCGTTCACAAACCGGTCTTCAACAACACTT
gi|7 : acagcagcagcttcgttagcagttttgAAGCTCACCAGATCATCAGTAGCT---------------TATA----CTGCACGGGAC-ATG-TTTACTCGGAGA-ATTACATTGTCTGTATAGATCATAACCCTATTT-GGTCAGAGGAGAAT---CGCAAAATACGA----GAATC----GTATTGGATCCGCAGA-TTAAACACTTTTCAGCCATTTGGCTTCAATAAAGAGGACAATGCACGTGTTGTTATACA-AAATGATATACTTCGCCAGTGCACCTGCCTATTCA----TATATGCAATAGTTTAAAT---------ATAGT--------GT---CATATA--TTGT---ATAT-ATATTA----TATATGTCGGCGTTCACAAACCGGTCTTCAACAACACTTc
gi|8 : cagcagcagcttcgttagcagttttg-TCTTCTCGGAGATATC-CATTATCTGTTTAGATCATAGCCCTAATT-GGTCAGGCGAGAAG---CGCAAAATACGA----GAATC----GTACTGGATCCGCAGA-TTAAATACTATTCAAACTTTTGGCCTCAACAAAGGGGACGATGTACGTGTTGCTATACATAAATAATATACCTCGCCAGTGCATCTACCAATACA----TATATGCAATAGTTTAAATCTTACCCAAACAGTTCTACTCAATTTAC--ATGTTTTGTTCAATATGATGCTATGACTAAATGTCGACGTTCACAAATATGTCTTCAACAA-ACTT
gi|9 : CGATGCCTTAAAT--GACAGCCACCCCCTTTTCGTTCATCCAGATGCGCAATATGCTAACAAATGCCTTCTTCACTAACTGTTTC-AATCAATCAACGACTGATGCAATAATATATATCT----TCTAACGCCAGCTGCAAAACAAGTTGGTTTGCTGCCTA-TTGGC-----------TTGCAAG-AGTGAG-AAAAACAGTATGTCGA-TGAAACG-----AAAACTCCTCTTAATCTGAGA-----ATTAACACGCTATGATCCGATGTACTTAACCGTAAGCTTACCAGATCACCAGTGGCTgt