lowQualScore : 1 1 11 222222222 88888888888888888 1111111 1111 111
lowQualScore : 7 4 3 0 0 22 3 3 3 66666 888 3 3 3 66 22 44 2 111111111 9999999 2 4 5 5 8 5 2 2 66666 2 33 33333333333333333 2 5555 444 444 3333333 0 1111 4 4 000 4
lowQualScore : . . . . . .. . . . ..... ... . . . .. .. .. . ......... ....... . . . . . . . . ..... . .. ................. . .... ... ... ....... . .... . . ... .
lowQualScore : 3 5 2 8 7 44 1 1 1 22222 333 3 3 3 77 77 22 9 777777777 3333333 4 9 0 2 2 1 5 5 22222 7 77 66666666666666666 7 7777 777 777 7777777 5 4444 0 0 333 4
consensus : TAATAAAAATCTCACAACTGAACTTTAATTCAAATTGACAGTGTAAAGCACCCTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTTC-CTTCTTCTATCCA---CN--TC-T-TT-TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCGTC-TTTTCTTATTATAACA-TT-A-----TTTCATAGAA-T--ACATTCATGTAAAAAA--T-------TAACTGTATGTA-TTAT----AT---CAAAT---ATATTTGTAAAATGTAT------GTATTATGAAATAATA----A-AA-AAN--TTA-AAAACAAAAAA
Reference ( gi|6 ) : TAATAAAAATCTCACAACTGAACTTAAATTCAAATTGACAGTGTAAAGCACCTTAATCTCTTTTCATGTCTGCAACTGTCTC-T-TTTC-CTTCTTCTATCTA---CT--TC-T-TT-TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCATC-TCTTCTTAGTATAGCA-TT-A-----TTTCATAGAA-T--ACATTCATGT--------T-------TAACTGTATGTA-TTAT----AT---CAAAT---ATATTTGTAAAATGTAT------ATATTATGAAATAATA----A-AA-AAT--TTA-AAAACAAAAAA
gi|9 : TAATAAAAATCCAACAATTGAACTTTAACTCAAATTGACAGTGTAAAGCACCTTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTTC-CTTCCTCTATCCA---CG--TC-TCTT-TTTTCCTTTTC--C--TCTTTA-------TTT--------CGCGTCTTTTTTTTATTATAACA-TT-A-----TTTTATAGAA-T--GCATGCATATAAAAAG--T-------TAACTGTACGTA-TTAT----AT---CAAAT---ATATATGTAAAAT
gi|11 : TAATAAAAA-CTCACAACTAAACTTCAATTCAAATTGGCAAAGCAAAGCACTCTAACCTC-TTTCATGACTATTCCTGTTTG-T-TTTCTTTTCTTCTGTCCA---CG--TC-T-TT-TTT---TTTTC--C--T-TTTAATTTTTCTTT-------TCTCTTC-TTTTCTTATTATAATA-TT-A-----TTTCATAGAA-T--GTA---ATG---------T-------TAACTGTATATA-TTAT----GT---TACAT---GCAATCGCAAAtt
gi|18 : TAATAAAAATCTCACAACTGCACTTTAACTGAAATTGACAGCGAAAAGCACCCTAATCTCTTTACATGACTATTTCTGGTTA-T-TTTC-CTTCTTATATCCA---CT--Tcgta
gi|3 : AATAAAAATCTCACAAATAAACTTTAGTTCAAATTGACAGGGTTAATCACCCTTATCTCTTTACATGACTATTCCTGTGCC-T-TTTC-CTTCTACTATCCA---CGAATC-T-TT-TT--ACTTTTCATT--T-TTC--------TTT-------CCCCGTC-TTTTCTTATTATAACA-TT-A-----TTTCATAAAT-T--ACATGCATGTTAAAAAG-T-------TATCTGTATGTA-TAAT----GG---TAAAT---ATATTTGCAAAATGTAT------GTATTATGAAGTAATA----A-GA-CAA--TTA-AAAGCAAAAtgt
gi|2 : AATTAAAA-CT-ACAGCCGAAATTTTATTCAAACTGACAGTGCAATGAACTCTAATA-----TTGTGTTT----CTATCGT-A-TTTT-CTTCTTC---CTC---CT--CC-T-TT-TTT--CTTTTC--T--C-TTC--------TGT-------CTAAATCTTTTTCATAGAATA-CATTT-A-----TTTCACAAAAGTTAACA-ACATGT--------T-------TA--TGAAGGTACTTGTAGAAATTCGCAAATAACATGCTTATAAAAT
gi|8 : tttaTAAAAA-CTCACAACTGAACTTTCATTCAAATTACCAGTGTAAAGCA----AACCTCTTCTCATGACTACTCCTGTTTC-T-TTTT-TTTCT------------------T-TT-TTTCTCGT-----C--T-T------------------------------TTCTTATTATAAAA-TT-A-----TTTCATAGAA-T--ACATTCATGTAAAAAAG-T-------GAACAGTACGTA-TTAT----AT---TAAAT---GTATTAGCTAAATGTAT------GTTTTATAAAATAATAT---A-AA-AAtgacaaaagcctcacacgtaataaacaattttatcacatcacgcttattgtcatctaagaatttatattcaatagttgtattctctcacag
gi|5 : AAAAATCTCACAACAGAACGTTAATTCAAATTGACAGTGTAAAGCACCGTAATCTCTTTTCATGACGGCAACTGTTTC-T-TTTC-CTTCTTCTATCCA---CG--TC-T-TT-TTTACCTTTTC--CATT-TTC--------TTT-------CCCCGTC-TTTTCTTATTATAATA-TT-A-----TTCCATAGAA-T--ACATTCATATA-------TACATACATAACTGTATGTA-TTTT----AT---CAAAT---ATATTTTTAAAATATAT------ATATTATGAAATAATA----A-AA-AAA--TTA-AAAACAAAaaatatagaccaagtctaaataaa
gi|7 : AAAAATCTCACAACTGAACTTTAATTCAAATTAACAGTGCAAAGCACCGTAATCTCTTTTCATGACTGCAATTGTATA-T-TTTA-CTTCTTCCGCCCACGTCT--TC-T-TG-TTTTACTTTTCCAC--C-TTC--------TTT-------CTTCGTC-TTTTCTTATTGTAATA-TT-A-----TTTCATAGAA-T--ACATTCACATAAAAAAAGT-------TAACTGTATGTA-TTAT----AT---CAAAT---ATATTTGTAAAATTTAT------GGTTTGTGAAATAATA----
gi|13 : aaAATCTCACAACTTAACA-AAATTCAAGTTGACAGTATAAAGCATTTAAATCTTTTTTCATGACTGCAACTGTCTC-T-TTTC-CTTCTTCTATCCA---CG--TC-T-TTCTTTCTTTTTTC--C--T-TTTA-------TTT-------CACCGTC-TCTTCTTATTATAACA-TT-A-----TTTCAT
gi|4 : TCACAACTGAACTTTAATTCAAATTGATAGTGTAAAGCACCTTAATCTCTTTTCATGACTGCAACTGTCTCTT-TTTC-CGTCTTCTGTCCT---CA--TCTT-TT-TTTTCCTTTTCCTC--T-TTC--------TTT-------CCGCGTC-TTTTCTTATTATAACA-TT-T-----TTTCATAGCA-T--ACATTCATATAAAAAAG-T-------TAACTCTATGTA-TTAT----AT---CAAAT---ATGTTTGTAAAATGTATGTACCGGTATTATGAAATAATA----A-AA-AAT--TTA-AAAACAA
gi|1 : tACAGCCGAAGTTTTATTCAGACTGACGGTGCAATGAACCCTAAATTATT-----------GAC-GTTCC-TATTTC-GTT--TCTATCTT---CT--CT-T-TT-TCTCCCTCTTC--C--T-TT-A-------T--------------TC-TGTTC--AATAT-GTC-TT-AATCTTTTTTATAGAA-T--ACATTCGTTTCACAAAAGT-------TAACAATATGTA-TTAT----------AAAT---GTATTTGTAAAA
gi|10 : atGTGTTAAGCAACTTAATCTTTTTTCATGTCTGCAACTGTCTC-T-TTTC-CTTCTTCTATCTA---CT--TC-T-TT-TTTCCCTTTTC--C--T-TTTA-------TTT-------CCCCGTC-TCTTCTTAGTATAACA-TT-A-----TTTCATAGAA-T--GCATTCATGT--------T-------AAACTGTATGTA-TCAT----AC---CAAAT---ATATTTGTAAAATGTAT------GTATTATGAAATAATAAAACA-AA-AAA--TTA-AAAACAAAAActtagttcagtaatataggccaattacatgattttaaaattaataaaagcctcacacgttataaacgcacgttaatttatattacaccattcaaagggtgacctaagaatttacattcagtagtttcattctgtcaca
gi|12 : TGTCTGCAACTGTCTC-T-TTTC-CTTCTTCTATCTA---CT--TC-T-TT-TTTCCCTTTTC--C--T-TTTA-------TTT-------CCCCGTC-TCTTCTTAGTATAGCA-TT-A-----TATAATAAAA-T--ACATTCATGT--------T-------AAACTGTATGTA-TTAT----AT---CAAAC---ATATTTGTAAAATGTAT------GTATTATGAAATAATA----A-AA-AAA--TTA-AAAACAA
gi|15 : CCTTTTC--C--T-TTTA-------TTT-------CCCCATC-TCTTCTTAGTATAGCA-TT-A-----TTTCATAGAA-T--ACATTCATGT--------T-------AAACTGTATGTA-TTAT----AT---CAAAT---ATATTTGTAAAATGTAT------ATATTATGAAATAATA----A-AA-AAT--TTA-AAAACAAAAA
gi|14 : -TTCA-------TTTTTTTCTACCTCAAC-TTTTCTTATTATAACA-TT-A-----TTGCCTGGAA-T--ACATTCATATAAATTAAGT-------TAACTGTAT----TTAT-----T---TAAAT---GTATTTGCAAAATGTAT------GTATTATGAACTAAT-----A-AA-AAT--TTA-AAAACAGAAA
gi|17 : TT-TTTTATTATTATAACA-TTTA-----TTTCATATAA-T--ACATTCATATAAAAAA--T-------AAACTGTATGTA-TTAT----AT---TAAAT---ATATTGGCAAAATGTAT------GTTTTATGAAATAATA----A-AA-GGT--TTATAAGAAAGAAAA
gi|16 : gtTC-T-TTCCTATTATAACA-TT-A-----TTTCATAGAA-T--ACATTCATATCAAAGAAGT-------AAACTGTATTCA-TTAT----AT---TCAAT---GCATGTGCAAAGAATAT------GTTTTATAAGATAATA----ATAATAACTGTTG-AAAAAAAAGAAa
Alignments
lowQualScore : 11 111111111 3333333333333
lowQualScore : 5 1 22 2 2 2 555 2 555 3 3 888 2 11 33 2 999999999 8888888 2 33 2 2 22 0000000000000 33 2 2 33 888888 888888 3 44 6666 3 3 666 3
lowQualScore : . . .. . . . ... . ... . . ... . .. .. . ......... ....... . .. . . .. ............. .. . . .. ...... ...... . .. .... . . ... .
lowQualScore : 7 9 44 9 9 9 000 9 999 1 1 555 6 88 99 7 000000000 7777777 5 22 4 4 66 4444444444444 00 1 5 99 888888 888888 1 22 5555 3 3 000 6
consensus : TAATAAAAATCTCACAACTGAACTTTAATTCAAATTGACAGTGTAAAGCACCCTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--NTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAGAATACATTCATG-T--A-AA--AAG--T-TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--NTTA-AAAACAAAAAA
Reference ( family-1672 ) : TAATAAAAATCTCACAACTGAACTTTAATTCAAATTGACAGTGTAAAGCACCCTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--NTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAGAATACATTCATG-T--A-AA--AAA--T-TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--NTTA-AAAACAAAAAA
gi|1 : ACAGCCGAAGTTTTATTCAGACTGACGGTGCAATGAACCCTAA---------ATTATTG--AC-GTTCC-TATTT---C-GTT--TCTATCTTC--TCT-T-TT---TCTCCCTCTTC--C--T-TT-A-------TT--------------C-TGTTCAATATGTCTTAATCTT--TTTTATAGAATACATTCGTT-TC-ACAA--AAG--T-TAACAATATGTATTAT---AAATGTATTTGTA-AAA
gi|10 : atGTGTTAAGCAACTTAATCTTTTTTCATGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTTA-------TTT-------CCCCGTC-TCTTC--T-TAGTATAACATT-ATTTCATAGAATGCATTCATG-T-------------T-AAACTGTATGTATCATACCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATAAAACA-AA-AA--ATTA-AAAACAAAAActtagttcagtaatataggccaattacatgattttaaaattaataaaagcctcacacgttataaacgcacgttaatttatattacaccattcaaagggtgacctaagaatttacattcagtagtttcattctgtcaca
gi|11 : TAATAAAAA-CTCACAACTAAACTTCAATTCAAATTGGCAAAGCAAAGCACTCTAACCTC-TTTCATGACTATTCCTGTTTG-T-TTT---CTTTTCTTCTGTCCAC--GTC-T-TT---TTT---TTTTC--C--T-TTTAATTTTTCTTT-------TCTCTTC-TTTTC--T-TATTATAATATT-ATTTCATAGAATGTA---ATG---------------T-TAACTGTATATATTATGTTACATGCAATCGCA-AA
gi|12 : TGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTTA-------TTT-------CCCCGTC-TCTTC--T-TAGTATAGCATT-ATATAATAAAATACATTCATG-T-------------T-AAACTGTATGTATTATATCAAACATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--ATTA-AAAACAAcgta
gi|13 : AATCTCACAACTTAACAA-AATTCAAGTTGACAGTATAAAGCATTTAAATCTTTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--GTC-T-TTC--TTTCTTTTTTC--C--T-TTTA-------TTT-------CACCGTC-TCTTC--T-TATTATAACATT-ATTTCAT
gi|14 : -TTCA-------TTTTTTTCTACCTCAAC-TTTTC--T-TATTATAACATT-ATTGCCTGGAATACATTCATA-T--A-AATTAAG--T-TAACTGTAT---TTAT-TTAAATGTATTTGCA-AAAT--GTAT------GTA------TTATGAAC-TA--AT-----A-AA-AA--TTTA-AAAACAGAAA
gi|15 : CCTTTTC--C--T-TTTA-------TTT-------CCCCATC-TCTTC--T-TAGTATAGCATT-ATTTCATAGAATACATTCATG-T--T-AA--A---------CTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAAAAA
gi|16 : TTTC--C-TATTATAACATT-ATTTCATAGAATACATTCATA-TCAA-AG--AAG--T-AAACTGTATTCATTATATTCAATGCATGTGCA-AAGA--ATAT------GTT------TTATAAGA-TA--ATA----ATAATAACTGTTG-AAAAAAAAGAA
gi|17 : ctttcTT-TTTTA--T-TATTATAACATTTATTTCATATAATACATTCATA-T--A-AA--AAA--T-AAACTGTATGTATTATATTAAATATATTGGCA-AAAT--GTAT------GTT------TTATGAAA-TA--ATA----A-AA-GG--TTTATAAGAAAGAAAA
gi|18 : gtTAATAAAAATCTCACAACTGCACTTTAACTGAAATTGACAGCGAAAAGCACCCTAATCTCTTTACATGACTATTTCTGGTTA-T-TTT---C-CTTCTTATATCCAC--TTa
gi|2 : AATTAAAA-CT-ACAGCCGAAATTTTATTCAAACTGACAGTGCAATGAACTCTAAT-----------ATTG----TGTTTC-T-ATCGTAT-TTTCTTCT-TCCTC--CTC-C-TT---TTTTCTTTTCT--C--T-T----------------------CTGTC-T------------A-AATCTT--TTTCATAGAATACATTTATT-TC-ACAA--AAG--T-TAACAACATGT-TTAT---GAAGGTACTTGTAGAAATTCGCAA------ATAACATGCTTATAAAATTG--ACA----A-AA-tgt
gi|3 : tttaAATAAAAATCTCACAAATAAACTTTAGTTCAAATTGACAGGGTTAATCACCCTTATCTCTTTACATGACTATTCCTGTGCC-T-TTT---C-CTTCTACTATCCACGAATC-T-TT---TT--ACTTTTCATT--T-TTC--------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAAATTACATGCATGTT--A-AA--AAG--T-TATCTGTATGTATAATGGTAAATATATTTGCA-AAAT--GTAT------GTA------TTATGAAG-TA--ATA----A-GA-CA--ATTA-AAAGCAAAAgcctcacacgtaataaacaattttatcacatcacgcttattgtcatctaagaatttatattcaatagttgtattctctcacag
gi|4 : TCACAACTGAACTTTAATTCAAATTGATAGTGTAAAGCACCTTAATCTCTTTTCATGACTGCAACTGTCTCTT-TTT---C-CGTCTTCTGTCCTC--ATCTT-TT---TTTTCCTTTTCCTC--T-TTC--------TTT-------CCGCGTC-TTTTC--T-TATTATAACATT-TTTTCATAGCATACATTCATA-T--A-AA--AAAG-T-TAACTCTATGTATTATATCAAATATGTTTGTA-AAAT--GTATGTACCGGTA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAA
gi|5 : tAAAAATCTCACAACAGAACGTTAATTCAAATTGACAGTGTAAAGCACCGTAATCTCTTTTCATGACGGCAACTGTTTC-T-TTT---C-CTTCTTCTATCCAC--GTC-T-TT---TTTACCTTTTC--CATT-TTC--------TTT-------CCCCGTC-TTTTC--T-TATTATAATATT-ATTCCATAGAATACATTCATA-T--ATAC--ATA--CATAACTGTATGTATTTTATCAAATATATTTTTA-AAAT--ATAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--ATTA-AAAACAAA
gi|6 : TAATAAAAATCTCACAACTGAACTTAAATTCAAATTGACAGTGTAAAGCACCTTAATCTCTTTTCATGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCATC-TCTTC--T-TAGTATAGCATT-ATTTCATAGAATACATTCATG-T-------------T-TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAAAAAA
gi|7 : AAAAATCTCACAACTGAACTTTAATTCAAATTAACAGTGCAAAGCACCGTAATCTCTTTTCATGACTGCAATTGTATA-T-TTT---A-CTTCTTCCGCCCAC--GTC-T-TCTTGTTTTACTTTTCCAC--C-TTC--------TTT-------CTTCGTC-TTTTC--T-TATTGTAATATT-ATTTCATAGAATACATTCACA-T--A-AA--AAAAGT-TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--TTAT------GGT------TTGTGAAA-TA--ATA----
gi|8 : aaTAAAAA-CTCACAACTGAACTTTCATTCAAATTACCAGTGTAAAGCA----AACCTCTTCTCATGACTACTCCTGT---------------TTCTT--------------T-TT---TTTCTTTTTTT--C--T-------------------------CGTC-TTTTC--T-TATTATAAAATT-ATTTCATAGAATACATTCATG-T--A-AA--AAAG-T-GAACAGTACGTATTATATTAAATGTATTAGCT-AAAT--GTAT------GTT------TTATAAAA-TAATATA----A-AA-AA--AATA-TAGACCAA
gi|9 : TAATAAAAATCCAACAATTGAACTTTAACTCAAATTGACAGTGTAAAGCACCTTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCCTCTATCCAC--GTC-TCTT---TTTTCCTTTTC--C--TCTTTA-------TTT--------CGCGTCTTTTTT--T-TATTATAACATT-ATTTTATAGAATGCATGCATA-T--A-AA--AAG--T-TAACTGTACGTATTATATCAAATATATATGTA-AAAT--gtctaaataaa
Alignments
lowQualScore : 11 111111111 2222
lowQualScore : 5 1 22 2 2 2 555 2 555 3 3 888 2 11 33 2 999999999 8888888 2 33 2 2 22 6666 33 00 4444 2 2 33 888888 888888 3 44 6666 3 3 666 3
lowQualScore : . . .. . . . ... . ... . . ... . .. .. . ......... ....... . .. . . .. .... .. .. .... . . .. ...... ...... . .. .... . . ... .
lowQualScore : 7 9 44 9 9 9 000 9 999 1 1 555 6 88 99 7 000000000 7777777 5 22 4 4 66 8888 44 66 9999 1 5 99 888888 888888 1 22 5555 3 3 000 6
consensus : TAATAAAAATCTCACAACTGAACTTTAATTCAAATTGACAGTGTAAAGCACCCTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--NTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAGAATACATTCATG-T--A-AA--AAGT---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--NTTA-AAAACAAAAAA
Reference ( family-1672 ) : TAATAAAAATCTCACAACTGAACTTTAATTCAAATTGACAGTGTAAAGCACCCTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--NTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAGAATACATTCATG-T--A-AA--AAGT---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--NTTA-AAAACAAAAAA
gi|1 : ACAGCCGAAGTTTTATTCAGACTGACGGTGCAATGAACCCTAA---------ATTATTG--AC-GTTCC-TATTT---C-GTT--TCTATCTTC--TCT-T-TT---TCTCCCTCTTC--C--T-TT-A-------TT--------------C-TGTTCAATATGTCTTAATCTT--TTTTATAGAATACATTCGTT-TC-ACAA--AAGT---TAACAATATGTATTAT---AAATGTATTTGTA-AAA
gi|10 : atGTGTTAAGCAACTTAATCTTTTTTCATGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTTA-------TTT-------CCCCGTC-TCTTC--T-TAGTATAACATT-ATTTCATAGAATGCATTCATG-T-----------T---AAACTGTATGTATCATACCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATAAAACA-AA-AA--ATTA-AAAACAAAAActtagttcagtaatataggccaattacatgattttaaaattaataaaagcctcacacgttataaacgcacgttaatttatattacaccattcaaagggtgacctaagaatttacattcagtagtttcattctgtcaca
gi|11 : TAATAAAAA-CTCACAACTAAACTTCAATTCAAATTGGCAAAGCAAAGCACTCTAACCTC-TTTCATGACTATTCCTGTTTG-T-TTT---CTTTTCTTCTGTCCAC--GTC-T-TT---TTT---TTTTC--C--T-TTTAATTTTTCTTT-------TCTCTTC-TTTTC--T-TATTATAATATT-ATTTCATAGA--------ATG-T-----A--ATGT---TAACTGTATATATTATGTTACATGCAATCGCA-AA
gi|12 : TGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTTA-------TTT-------CCCCGTC-TCTTC--T-TAGTATAGCATT-ATATAATAAAATACATTCATG-T-----------T---AAACTGTATGTATTATATCAAACATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--ATTA-AAAACAAcgta
gi|13 : AATCTCACAACTTAACAA-AATTCAAGTTGACAGTATAAAGCATTTAAATCTTTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--GTC-T-TTC--TTTCTTTTTTC--C--T-TTTA-------TTT-------CACCGTC-TCTTC--T-TATTATAACATT-ATTTCAT
gi|14 : -TTCA-------TTTTTTTCTACCTCAAC-TTTTC--T-TATTATAACATT-ATTGCCTGGAATACATTCATA-T--A-AATTAAGT---TAACTGTAT---TTAT-TTAAATGTATTTGCA-AAAT--GTAT------GTA------TTATGAAC-TA--AT-----A-AA-AA--TTTA-AAAACAGAAA
gi|15 : CCTTTTC--C--T-TTTA-------TTT-------CCCCATC-TCTTC--T-TAGTATAGCATT-ATTTCATAGAATACATTCATG-T--T-AA--A---------CTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAAAAA
gi|16 : TTTC--C-TATTATAACATT-ATTTCATAGAATACATTCATA-TCAA-AG--AAGT---AAACTGTATTCATTATATTCAATGCATGTGCA-AAGA--ATAT------GTT------TTATAAGA-TA--ATA----ATAATAACTGTTG-AAAAAAAAGAA
gi|17 : ctttcTT-TTTTA--T-TATTATAACATTTATTTCATATAATACATTCATA-T--A-AA--AAAT---AAACTGTATGTATTATATTAAATATATTGGCA-AAAT--GTAT------GTT------TTATGAAA-TA--ATA----A-AA-GG--TTTATAAGAAAGAAAA
gi|18 : gtTAATAAAAATCTCACAACTGCACTTTAACTGAAATTGACAGCGAAAAGCACCCTAATCTCTTTACATGACTATTTCTGGTTA-T-TTT---C-CTTCTTATATCCAC--TTa
gi|2 : AATTAAAA-CT-ACAGCCGAAATTTTATTCAAACTGACAGTGCAATGAACTCTAAT-----------ATTG----TGTTTC-T-ATCGTAT-TTTCTTCT-TCCTC--CTC-C-TT---TTTTCTTTTCT--C--T-T----------------------CTGTC-T------------A-AATCTT--TTTCATAGAATACATTTATT-TC-ACAA--AAGT---TAACAACATGT-TTAT---GAAGGTACTTGTAGAAATTCGCAA------ATAACATGCTTATAAAATTG--ACA----A-AA-tgt
gi|3 : tttaAATAAAAATCTCACAAATAAACTTTAGTTCAAATTGACAGGGTTAATCACCCTTATCTCTTTACATGACTATTCCTGTGCC-T-TTT---C-CTTCTACTATCCACGAATC-T-TT---TT--ACTTTTCATT--T-TTC--------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAAATTACATGCATGTT--A-AA--AAGT---TATCTGTATGTATAATGGTAAATATATTTGCA-AAAT--GTAT------GTA------TTATGAAG-TA--ATA----A-GA-CA--ATTA-AAAGCAAAAgcctcacacgtaataaacaattttatcacatcacgcttattgtcatctaagaatttatattcaatagttgtattctctcacag
gi|4 : TCACAACTGAACTTTAATTCAAATTGATAGTGTAAAGCACCTTAATCTCTTTTCATGACTGCAACTGTCTCTT-TTT---C-CGTCTTCTGTCCTC--ATCTT-TT---TTTTCCTTTTCCTC--T-TTC--------TTT-------CCGCGTC-TTTTC--T-TATTATAACATT-TTTTCATAGCATACATTCATA-TA-A-AA--AAGT---TAACTCTATGTATTATATCAAATATGTTTGTA-AAAT--GTATGTACCGGTA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAA
gi|5 : tAAAAATCTCACAACAGAACGTTAATTCAAATTGACAGTGTAAAGCACCGTAATCTCTTTTCATGACGGCAACTGTTTC-T-TTT---C-CTTCTTCTATCCAC--GTC-T-TT---TTTACCTTTTC--CATT-TTC--------TTT-------CCCCGTC-TTTTC--T-TATTATAATATT-ATTCCATAGAATACATTCATA-T--A-TA--CA-TACATAACTGTATGTATTTTATCAAATATATTTTTA-AAAT--ATAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--ATTA-AAAACAAA
gi|6 : TAATAAAAATCTCACAACTGAACTTAAATTCAAATTGACAGTGTAAAGCACCTTAATCTCTTTTCATGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCATC-TCTTC--T-TAGTATAGCATT-ATTTCATAGAATACATTCATG-T-----------T---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAAAAAA
gi|7 : AAAAATCTCACAACTGAACTTTAATTCAAATTAACAGTGCAAAGCACCGTAATCTCTTTTCATGACTGCAATTGTATA-T-TTT---A-CTTCTTCCGCCCAC--GTC-T-TCTTGTTTTACTTTTCCAC--C-TTC--------TTT-------CTTCGTC-TTTTC--T-TATTGTAATATT-ATTTCATAGAATACATTCACA-TAAA-AA--AAGT---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--TTAT------GGT------TTGTGAAA-TA--ATA----
gi|8 : aaTAAAAA-CTCACAACTGAACTTTCATTCAAATTACCAGTGTAAAGCA----AACCTCTTCTCATGACTACTCCTGT---------------TTCTT--------------T-TT---TTTCTTTTTTT--C--T-------------------------CGTC-TTTTC--T-TATTATAAAATT-ATTTCATAGAATACATTCATG-TA-A-AA--AAGT---GAACAGTACGTATTATATTAAATGTATTAGCT-AAAT--GTAT------GTT------TTATAAAA-TAATATA----A-AA-AA--AATA-TAGACCAA
gi|9 : TAATAAAAATCCAACAATTGAACTTTAACTCAAATTGACAGTGTAAAGCACCTTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCCTCTATCCAC--GTC-TCTT---TTTTCCTTTTC--C--TCTTTA-------TTT--------CGCGTCTTTTTT--T-TATTATAACATT-ATTTTATAGAATGCATGCATA-T--A-AA--AAGT---TAACTGTACGTATTATATCAAATATATATGTA-AAAT--gtctaaataaa
Alignments
lowQualScore : 11 111111111 2222
lowQualScore : 5 1 22 2 2 2 555 2 555 3 3 888 2 11 33 2 999999999 8888888 2 33 2 2 22 6666 33 00 4444 2 2 33 888888 888888 3 44 6666 3 3 666 3
lowQualScore : . . .. . . . ... . ... . . ... . .. .. . ......... ....... . .. . . .. .... .. .. .... . . .. ...... ...... . .. .... . . ... .
lowQualScore : 7 9 44 9 9 9 000 9 999 1 1 555 6 88 99 7 000000000 7777777 5 22 4 4 66 8888 44 66 9999 1 5 99 888888 888888 1 22 5555 3 3 000 6
consensus : TAATAAAAATCTCACAACTGAACTTTAATTCAAATTGACAGTGTAAAGCACCCTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--NTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAGAATACATTCATG-T--A-AA--AAGT---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--NTTA-AAAACAAAAAA
Reference ( family-1672 ) : TAATAAAAATCTCACAACTGAACTTTAATTCAAATTGACAGTGTAAAGCACCCTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--NTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAGAATACATTCATG-T--A-AA--AAGT---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--NTTA-AAAACAAAAAA
gi|1 : ACAGCCGAAGTTTTATTCAGACTGACGGTGCAATGAACCCTAA---------ATTATTG--AC-GTTCC-TATTT---C-GTT--TCTATCTTC--TCT-T-TT---TCTCCCTCTTC--C--T-TT-A-------TT--------------C-TGTTCAATATGTCTTAATCTT--TTTTATAGAATACATTCGTT-TC-ACAA--AAGT---TAACAATATGTATTAT---AAATGTATTTGTA-AAA
gi|10 : atGTGTTAAGCAACTTAATCTTTTTTCATGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTTA-------TTT-------CCCCGTC-TCTTC--T-TAGTATAACATT-ATTTCATAGAATGCATTCATG-T-----------T---AAACTGTATGTATCATACCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATAAAACA-AA-AA--ATTA-AAAACAAAAActtagttcagtaatataggccaattacatgattttaaaattaataaaagcctcacacgttataaacgcacgttaatttatattacaccattcaaagggtgacctaagaatttacattcagtagtttcattctgtcaca
gi|11 : TAATAAAAA-CTCACAACTAAACTTCAATTCAAATTGGCAAAGCAAAGCACTCTAACCTC-TTTCATGACTATTCCTGTTTG-T-TTT---CTTTTCTTCTGTCCAC--GTC-T-TT---TTT---TTTTC--C--T-TTTAATTTTTCTTT-------TCTCTTC-TTTTC--T-TATTATAATATT-ATTTCATAGA--------ATG-T-----A--ATGT---TAACTGTATATATTATGTTACATGCAATCGCA-AA
gi|12 : TGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTTA-------TTT-------CCCCGTC-TCTTC--T-TAGTATAGCATT-ATATAATAAAATACATTCATG-T-----------T---AAACTGTATGTATTATATCAAACATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--ATTA-AAAACAAcgta
gi|13 : AATCTCACAACTTAACAA-AATTCAAGTTGACAGTATAAAGCATTTAAATCTTTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--GTC-T-TTC--TTTCTTTTTTC--C--T-TTTA-------TTT-------CACCGTC-TCTTC--T-TATTATAACATT-ATTTCAT
gi|14 : -TTCA-------TTTTTTTCTACCTCAAC-TTTTC--T-TATTATAACATT-ATTGCCTGGAATACATTCATA-T--A-AATTAAGT---TAACTGTAT---TTAT-TTAAATGTATTTGCA-AAAT--GTAT------GTA------TTATGAAC-TA--AT-----A-AA-AA--TTTA-AAAACAGAAA
gi|15 : CCTTTTC--C--T-TTTA-------TTT-------CCCCATC-TCTTC--T-TAGTATAGCATT-ATTTCATAGAATACATTCATG-T--T-AA--A---------CTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAAAAA
gi|16 : TTTC--C-TATTATAACATT-ATTTCATAGAATACATTCATA-TCAA-AG--AAGT---AAACTGTATTCATTATATTCAATGCATGTGCA-AAGA--ATAT------GTT------TTATAAGA-TA--ATA----ATAATAACTGTTG-AAAAAAAAGAA
gi|17 : ctttcTT-TTTTA--T-TATTATAACATTTATTTCATATAATACATTCATA-T--A-AA--AAAT---AAACTGTATGTATTATATTAAATATATTGGCA-AAAT--GTAT------GTT------TTATGAAA-TA--ATA----A-AA-GG--TTTATAAGAAAGAAAA
gi|18 : gtTAATAAAAATCTCACAACTGCACTTTAACTGAAATTGACAGCGAAAAGCACCCTAATCTCTTTACATGACTATTTCTGGTTA-T-TTT---C-CTTCTTATATCCAC--TTa
gi|2 : AATTAAAA-CT-ACAGCCGAAATTTTATTCAAACTGACAGTGCAATGAACTCTAAT-----------ATTG----TGTTTC-T-ATCGTAT-TTTCTTCT-TCCTC--CTC-C-TT---TTTTCTTTTCT--C--T-T----------------------CTGTC-T------------A-AATCTT--TTTCATAGAATACATTTATT-TC-ACAA--AAGT---TAACAACATGT-TTAT---GAAGGTACTTGTAGAAATTCGCAA------ATAACATGCTTATAAAATTG--ACA----A-AA-tgt
gi|3 : tttaAATAAAAATCTCACAAATAAACTTTAGTTCAAATTGACAGGGTTAATCACCCTTATCTCTTTACATGACTATTCCTGTGCC-T-TTT---C-CTTCTACTATCCACGAATC-T-TT---TT--ACTTTTCATT--T-TTC--------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAAATTACATGCATGTT--A-AA--AAGT---TATCTGTATGTATAATGGTAAATATATTTGCA-AAAT--GTAT------GTA------TTATGAAG-TA--ATA----A-GA-CA--ATTA-AAAGCAAAAgcctcacacgtaataaacaattttatcacatcacgcttattgtcatctaagaatttatattcaatagttgtattctctcacag
gi|4 : TCACAACTGAACTTTAATTCAAATTGATAGTGTAAAGCACCTTAATCTCTTTTCATGACTGCAACTGTCTCTT-TTT---C-CGTCTTCTGTCCTC--ATCTT-TT---TTTTCCTTTTCCTC--T-TTC--------TTT-------CCGCGTC-TTTTC--T-TATTATAACATT-TTTTCATAGCATACATTCATA-TA-A-AA--AAGT---TAACTCTATGTATTATATCAAATATGTTTGTA-AAAT--GTATGTACCGGTA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAA
gi|5 : tAAAAATCTCACAACAGAACGTTAATTCAAATTGACAGTGTAAAGCACCGTAATCTCTTTTCATGACGGCAACTGTTTC-T-TTT---C-CTTCTTCTATCCAC--GTC-T-TT---TTTACCTTTTC--CATT-TTC--------TTT-------CCCCGTC-TTTTC--T-TATTATAATATT-ATTCCATAGAATACATTCATA-T--A-TA--CA-TACATAACTGTATGTATTTTATCAAATATATTTTTA-AAAT--ATAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--ATTA-AAAACAAA
gi|6 : TAATAAAAATCTCACAACTGAACTTAAATTCAAATTGACAGTGTAAAGCACCTTAATCTCTTTTCATGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCATC-TCTTC--T-TAGTATAGCATT-ATTTCATAGAATACATTCATG-T-----------T---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAAAAAA
gi|7 : AAAAATCTCACAACTGAACTTTAATTCAAATTAACAGTGCAAAGCACCGTAATCTCTTTTCATGACTGCAATTGTATA-T-TTT---A-CTTCTTCCGCCCAC--GTC-T-TCTTGTTTTACTTTTCCAC--C-TTC--------TTT-------CTTCGTC-TTTTC--T-TATTGTAATATT-ATTTCATAGAATACATTCACA-TAAA-AA--AAGT---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--TTAT------GGT------TTGTGAAA-TA--ATA----
gi|8 : aaTAAAAA-CTCACAACTGAACTTTCATTCAAATTACCAGTGTAAAGCA----AACCTCTTCTCATGACTACTCCTGT---------------TTCTT--------------T-TT---TTTCTTTTTTT--C--T-------------------------CGTC-TTTTC--T-TATTATAAAATT-ATTTCATAGAATACATTCATG-TA-A-AA--AAGT---GAACAGTACGTATTATATTAAATGTATTAGCT-AAAT--GTAT------GTT------TTATAAAA-TAATATA----A-AA-AA--AATA-TAGACCAA
gi|9 : TAATAAAAATCCAACAATTGAACTTTAACTCAAATTGACAGTGTAAAGCACCTTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCCTCTATCCAC--GTC-TCTT---TTTTCCTTTTC--C--TCTTTA-------TTT--------CGCGTCTTTTTT--T-TATTATAACATT-ATTTTATAGAATGCATGCATA-T--A-AA--AAGT---TAACTGTACGTATTATATCAAATATATATGTA-AAAT--gtctaaataaa
blockSeqs : T T CA C T . GTA T GAA T C TTG C AT AT C TAATTTTTC TTTTCTA T . . T GT CAA TT ACAT A G TC GTACCG ACATGC T AT . T T CTG T
blockSeqs : T C TT T . . . . T . . C C CT . . TA . . . . . G CAC . A G . . . . . . . . . A .
blockSeqs : T T CA C . . . . G . . . C CA . . TA . . . . . G AAA . T A . . . . . . . . . T .
blockSeqs : T C CA C . . . . T . . . T . . . TA . . . . . G AA . A A . . . . . . . . . T .
blockSeqs : T C TT T . . . . G . . . T . . . CA . . . . . A AA . T A . . . . . . . . . T .
blockSeqs : T C TT T . . . . T . . . A . . . TA . . . . . G A . A A . . . . . . . . . A .
blockSeqs : T T CA G . . . . C . . . C . . . CA . . . . . A T . A G . . . . . . . . . T .
blockSeqs : . G CA C . . . . A . . . T . . . TA . . . . . A A . T A . . . . . . . . . A .
blockSeqs : . T CA T . . . . G . . . C . . . C . . . . . T A . T A . . . . . . . . . T .
blockSeqs : G CA C . . . . T . . . T . . . C . . . . . A A . T A . . . . . . . . . A .
blockSeqs : T CT A . . . . G . . . . . . . C . . . . . A A . T A . . . . . . . . .
blockSeqs : . CA C . . . . G . . . . . . . C . . . . . G . . T A . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . A . . G A . .
blockSeqs : . . . . . . . G . . T . .
blockSeqs : . . . . A . . . . .
blockSeqs : . . .
blockSeqCons : CA CA******* ** A*** ****
originalCons : TAATAAAAATCTCACAACTGAACTTTAATTCAAATTGACAGTGTAAAGCACCCTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--NTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAGAATACATTCATG-T--A-AA--AAGT---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--NTTA-AAAACAAAAAA
finalCons : TAATAAAAATCTCACAACTGAACTTTAATTCAAATTGACAGTGTAAAGCACCCTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--NTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAGAATACATTCATG-TA---AA--AAGT---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--NTTA-AAAACAAAAAA
Alignments
lowQualScore : 11 111111111 2222
lowQualScore : 5 1 22 2 2 2 555 2 555 3 3 888 2 11 33 2 999999999 8888888 2 33 2 2 22 6666 33 00 4444 2 2 33 888888 888888 3 44 6666 3 3 666 3
lowQualScore : . . .. . . . ... . ... . . ... . .. .. . ......... ....... . .. . . .. .... .. .. .... . . .. ...... ...... . .. .... . . ... .
lowQualScore : 7 9 44 9 9 9 000 9 999 1 1 555 6 88 99 7 000000000 7777777 5 22 4 4 66 8888 44 66 9999 1 5 99 888888 888888 1 22 5555 3 3 000 6
consensus : TAATAAAAATCTCACAACTGAACTTTAATTCAAATTGACAGTGTAAAGCACCCTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--NTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAGAATACATTCATG-T--A-AA--AAGT---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--NTTA-AAAACAAAAAA
Reference ( family-1672 ) : TAATAAAAATCTCACAACTGAACTTTAATTCAAATTGACAGTGTAAAGCACCCTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--NTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAGAATACATTCATG-T--A-AA--AAGT---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--NTTA-AAAACAAAAAA
gi|1 : ACAGCCGAAGTTTTATTCAGACTGACGGTGCAATGAACCCTAA---------ATTATTG--AC-GTTCC-TATTT---C-GTT--TCTATCTTC--TCT-T-TT---TCTCCCTCTTC--C--T-TT-A-------TT--------------C-TGTTCAATATGTCTTAATCTT--TTTTATAGAATACATTCGTT-TC-ACAA--AAGT---TAACAATATGTATTAT---AAATGTATTTGTA-AAA
gi|10 : atGTGTTAAGCAACTTAATCTTTTTTCATGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTTA-------TTT-------CCCCGTC-TCTTC--T-TAGTATAACATT-ATTTCATAGAATGCATTCATG-T-----------T---AAACTGTATGTATCATACCAAATATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATAAAACA-AA-AA--ATTA-AAAACAAAAActtagttcagtaatataggccaattacatgattttaaaattaataaaagcctcacacgttataaacgcacgttaatttatattacaccattcaaagggtgacctaagaatttacattcagtagtttcattctgtcaca
gi|11 : TAATAAAAA-CTCACAACTAAACTTCAATTCAAATTGGCAAAGCAAAGCACTCTAACCTC-TTTCATGACTATTCCTGTTTG-T-TTT---CTTTTCTTCTGTCCAC--GTC-T-TT---TTT---TTTTC--C--T-TTTAATTTTTCTTT-------TCTCTTC-TTTTC--T-TATTATAATATT-ATTTCATAGA--------ATG-T-----A--ATGT---TAACTGTATATATTATGTTACATGCAATCGCA-AA
gi|12 : TGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTTA-------TTT-------CCCCGTC-TCTTC--T-TAGTATAGCATT-ATATAATAAAATACATTCATG-T-----------T---AAACTGTATGTATTATATCAAACATATTTGTA-AAAT--GTAT------GTA------TTATGAAA-TA--ATA----A-AA-AA--ATTA-AAAACAAcgta
gi|13 : AATCTCACAACTTAACAA-AATTCAAGTTGACAGTATAAAGCATTTAAATCTTTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCCAC--GTC-T-TTC--TTTCTTTTTTC--C--T-TTTA-------TTT-------CACCGTC-TCTTC--T-TATTATAACATT-ATTTCAT
gi|14 : -TTCA-------TTTTTTTCTACCTCAAC-TTTTC--T-TATTATAACATT-ATTGCCTGGAATACATTCATA-T--A-AATTAAGT---TAACTGTAT---TTAT-TTAAATGTATTTGCA-AAAT--GTAT------GTA------TTATGAAC-TA--AT-----A-AA-AA--TTTA-AAAACAGAAA
gi|15 : CCTTTTC--C--T-TTTA-------TTT-------CCCCATC-TCTTC--T-TAGTATAGCATT-ATTTCATAGAATACATTCATG-T--T-AA--A---------CTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAAAAA
gi|16 : TTTC--C-TATTATAACATT-ATTTCATAGAATACATTCATA-TCAA-AG--AAGT---AAACTGTATTCATTATATTCAATGCATGTGCA-AAGA--ATAT------GTT------TTATAAGA-TA--ATA----ATAATAACTGTTG-AAAAAAAAGAA
gi|17 : ctttcTT-TTTTA--T-TATTATAACATTTATTTCATATAATACATTCATA-T--A-AA--AAAT---AAACTGTATGTATTATATTAAATATATTGGCA-AAAT--GTAT------GTT------TTATGAAA-TA--ATA----A-AA-GG--TTTATAAGAAAGAAAA
gi|18 : gtTAATAAAAATCTCACAACTGCACTTTAACTGAAATTGACAGCGAAAAGCACCCTAATCTCTTTACATGACTATTTCTGGTTA-T-TTT---C-CTTCTTATATCCAC--TTa
gi|2 : AATTAAAA-CT-ACAGCCGAAATTTTATTCAAACTGACAGTGCAATGAACTCTAAT-----------ATTG----TGTTTC-T-ATCGTAT-TTTCTTCT-TCCTC--CTC-C-TT---TTTTCTTTTCT--C--T-T----------------------CTGTC-T------------A-AATCTT--TTTCATAGAATACATTTATT-TC-ACAA--AAGT---TAACAACATGT-TTAT---GAAGGTACTTGTAGAAATTCGCAA------ATAACATGCTTATAAAATTG--ACA----A-AA-tgt
gi|3 : tttaAATAAAAATCTCACAAATAAACTTTAGTTCAAATTGACAGGGTTAATCACCCTTATCTCTTTACATGACTATTCCTGTGCC-T-TTT---C-CTTCTACTATCCACGAATC-T-TT---TT--ACTTTTCATT--T-TTC--------TTT-------CCCCGTC-TTTTC--T-TATTATAACATT-ATTTCATAAATTACATGCATGTT--A-AA--AAGT---TATCTGTATGTATAATGGTAAATATATTTGCA-AAAT--GTAT------GTA------TTATGAAG-TA--ATA----A-GA-CA--ATTA-AAAGCAAAAgcctcacacgtaataaacaattttatcacatcacgcttattgtcatctaagaatttatattcaatagttgtattctctcacag
gi|4 : TCACAACTGAACTTTAATTCAAATTGATAGTGTAAAGCACCTTAATCTCTTTTCATGACTGCAACTGTCTCTT-TTT---C-CGTCTTCTGTCCTC--ATCTT-TT---TTTTCCTTTTCCTC--T-TTC--------TTT-------CCGCGTC-TTTTC--T-TATTATAACATT-TTTTCATAGCATACATTCATA-TA-A-AA--AAGT---TAACTCTATGTATTATATCAAATATGTTTGTA-AAAT--GTATGTACCGGTA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAA
gi|5 : tAAAAATCTCACAACAGAACGTTAATTCAAATTGACAGTGTAAAGCACCGTAATCTCTTTTCATGACGGCAACTGTTTC-T-TTT---C-CTTCTTCTATCCAC--GTC-T-TT---TTTACCTTTTC--CATT-TTC--------TTT-------CCCCGTC-TTTTC--T-TATTATAATATT-ATTCCATAGAATACATTCATA-T--A-TA--CA-TACATAACTGTATGTATTTTATCAAATATATTTTTA-AAAT--ATAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--ATTA-AAAACAAA
gi|6 : TAATAAAAATCTCACAACTGAACTTAAATTCAAATTGACAGTGTAAAGCACCTTAATCTCTTTTCATGTCTGCAACTGTCTC-T-TTT---C-CTTCTTCTATCTAC--TTC-T-TT---TTTCCCTTTTC--C--T-TTCA-------TTT-------CCCCATC-TCTTC--T-TAGTATAGCATT-ATTTCATAGAATACATTCATG-T-----------T---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--GTAT------ATA------TTATGAAA-TA--ATA----A-AA-AA--TTTA-AAAACAAAAAA
gi|7 : AAAAATCTCACAACTGAACTTTAATTCAAATTAACAGTGCAAAGCACCGTAATCTCTTTTCATGACTGCAATTGTATA-T-TTT---A-CTTCTTCCGCCCAC--GTC-T-TCTTGTTTTACTTTTCCAC--C-TTC--------TTT-------CTTCGTC-TTTTC--T-TATTGTAATATT-ATTTCATAGAATACATTCACA-TAAA-AA--AAGT---TAACTGTATGTATTATATCAAATATATTTGTA-AAAT--TTAT------GGT------TTGTGAAA-TA--ATA----
gi|8 : aaTAAAAA-CTCACAACTGAACTTTCATTCAAATTACCAGTGTAAAGCA----AACCTCTTCTCATGACTACTCCTGT---------------TTCTT--------------T-TT---TTTCTTTTTTT--C--T-------------------------CGTC-TTTTC--T-TATTATAAAATT-ATTTCATAGAATACATTCATG-TA-A-AA--AAGT---GAACAGTACGTATTATATTAAATGTATTAGCT-AAAT--GTAT------GTT------TTATAAAA-TAATATA----A-AA-AA--AATA-TAGACCAA
gi|9 : TAATAAAAATCCAACAATTGAACTTTAACTCAAATTGACAGTGTAAAGCACCTTAATCTCTTTTCATGACTGCAACTGTCTC-T-TTT---C-CTTCCTCTATCCAC--GTC-TCTT---TTTTCCTTTTC--C--TCTTTA-------TTT--------CGCGTCTTTTTT--T-TATTATAACATT-ATTTTATAGAATGCATGCATA-T--A-AA--AAGT---TAACTGTACGTATTATATCAAATATATATGTA-AAAT--gtctaaataaa