lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2 1 1 2 1 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 6666 1
lowQualScore : 2 2 3 5 0 2 3 0 0 0 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 99 5 4 9 6 4 5 2 3333 6 5 4 7 5 3 0 5 5
lowQualScore : . . . . . . . . . . .................................................................................................. .. . . . . . . . .... . . . . . . . . .
lowQualScore : 1 8 8 0 0 0 5 9 4 2 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 99 6 4 4 0 0 0 2 4444 0 0 0 9 0 9 1 2 1
consensus : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCC-AAATCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGACTGTTATTTTTATACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGACNNATGTGGGAAATACTTN-CCAGTGCCATGACCGAGGATCAAACCCGG-GACCCTGGAATACTAATCCAATGACA-CGACCACTGGACTTGGGCGCCAC----AATAACAATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGG-CCACTGACTGATTTATTTCACTGTTATTTAT
Reference ( gi|1 ) : CCTTATCTACAAGTATAATTGGGAGCGCAATAGTTTAGGTAGCTCCCAGTACTTCC-AA-TCCAGCGGTTAGTGTACAAACCCAAAGCGTGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGACTGTTATTTTCATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTT-CCAGTGCCATGACCGAGGATCAAACTCGG-GACCGTGGAATACTAACCCAGTGACA-CGACCACTTGACTTGGGCGCCACCGTGAATAAAAATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTATCATTTTGCTAAACATG-CGACTGATTGATTTGTTTCACTGTTATTTAT
gi|2 : CCTTAACTACAAGTATAACGGGGAGCGCAATAGTTTAGGTAGTTCCCAGAACTTCC-AA-TCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGACTGTTATTTTCATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTT-CCAGTGCCATGACCAAGGATCAAACCCGG-GACCCTGGAATACTAATCCAATGACAACGACCACTTGACTAGGGCGCCACCGTGAATAAAAATAATCGTGCAGTTCAATACAATATATAGGCTAT-CAACCTAATATAGCAATTTATTATCATTTTGCTAAAAATG-CCAC----TGATTTGTTTCACTGTTATTTAT
gi|5 : CCTGAACTATAAGTATAATGTGGAGTGCAATAGTATAGATAGCTCGTAGAAATTCC-AAATCCAGCAGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTATTCGTGATTGTTAT--ATGGTGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTTTCCTGTGCCATGACCGAAGATCAAACCCGG-GACCCTGGAATACTAATCCAATGACA-CAACAACTGGACTTGTGCGCCAC----AGTAAAAATAGAGGAGCAATTCAAAACAATATATCAGTCAT-CAACCTAATATAGCAATTAATTATTCTTTTGCGTAACGGGTCAACTGATTCA----TTTCCCTGTTATTTAT
gi|6 : CTTTA-CTACAAGTATAATAGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCC-AA-TCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTGGGAAATACTTT-CCAGTGCCATGACCGAAGATCAAAGCCGG-GATCCTGAAATAATAATCt
gi|12 : gcCCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGTACTTCC-AA-TCCAGCGGTTAGTGTACAAACCCAAAGCGTGCGCATTATGTTCTTCGTGATT-TTATTGATGGT
gi|10 : gCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCC-AAATCCAGCGGTTAGTGTACAAAACCAAAGAGGGCGCATTATATTTTTCGTAATTGTTATTTATGGTGACTGTTATTTTTATA
gi|4 : TTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAACTCCCAGAACTTCC-AAATTCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATATTCTTCTTGATTGTTATTTATTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTA-CCAATGCCATAACCGAGGATCAAACTCGG-GACCGTGGAATACTAATCCAGTGACA-CGACCACTGGACTTGGGCGCCAC----AATAACAATAGTCATGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGG-CCACTGACTGATTTATTTCACTGTTATCTAT
gi|3 : TTAACTATAAGCATAACTGGGAGCGCAGTAGTTTAGGAAGCTCCAAGATCTCCC-AAATCCAGCGATTAGTGTACAAACCAAATGCGGGCGCATTATATTTTTCGTGATTGTTACTAATGGTGACTGTTATTTTTAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACCTA-TCAATGCCATAACCGAGGATCAAACACGG-GACCCTGGAATACTAATCCAATGACA-CGACCACAGGACTTGGGCGTCAC----AATAACAATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATTTAGCAATTTATTACTATTTTGCTAAACACG-CCACTGACTGATTTATTTCACTGTTATTTAT
gi|15 : TTA-CTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAACTCCCAAAACTTCCAAA-TCCAGCTGTTAGTGTACAAACCCAAAGCGGGTGTAt
gi|14 : tTTAACTACAAGTATAATAGGGATCGCAGTAGTTTAGGTAGCTCatg
gi|7 : TTACGTTCTTCGTGATAGTTATTAGTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--ATGTGGGAAACACTTT-CCAGTGCCATG-CAAAGCATCAAACCCGGCTTCTGTGGAATGCTTATCAAACTACA-CAATCACTATACTTGGGCGCCAC----AATGAAAATAGAGGTGGAATTCAGAACAATATtataagcatccctggttcatttacttcacatgcgaggtgtacaacaccgattgatgcg
gi|9 : ATGTGAGAAATACTTA-CCAATGCCATTACCGAGGATCAAATCCGG-GACCCTGGAATACTTATCCAATGACA-CGACCACTGGACTTGGGCGCCAC----AATAACAGTAGTCGTGCAGTTCAAAACAATATATCGGCTAT-CAACCTAATATAGCAATTTATTATTATTTTGCTAAACAGG-CCACTGACTGATTTATTTCACTGTTATTTAT
gi|8 : gacATGTGGGAAATACTTA-TCAATGCCATAACCGAGGATCAAACCCGG-GACCCTGGAATACTAATCCAATGACA-CGACCACTGGACTTGGGCGCCACAGT-AACAACAATAGTCGTGCAATTTAAAACAATATATCGGCTAT-CACCCTAATATAGCAATTTATTACTATTTTGCTAAACAGG-TCACTGACTGATTTATTTCAGTGTTACTTATt
gi|13 : ATGTGGCAAATACTTA-TCAATGCCATAACCGAGGATCAAACCCGG-GACCCTGAAATACTAATCCAATGACA-CGACCACTGGACTTGGGCGCCACt
gi|11 : caccgattgatgcgacTGGGCGCCAC----AATAACAATAGTCGTGTAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGG-CCACTGACTGATTTATTTCCCTGTTAa
gi|16 : AATATATACATTATACAGGGTAGTATAGCAATTTGTTATTATTTTGTAAAACATG-CCA---ACTGATTTATTTCACTGACATTTATgtgat
Alignments
lowQualScore : 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1111
lowQualScore : 7 2 0 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 55 4 4 7777 1 777 4 1 3
lowQualScore : . . . .................................................................................................. .. . . .... . ... . . .
lowQualScore : 3 1 9 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 00 0 4 0000 1 888 4 1 9
consensus : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGACTGTTATTTTCATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTN-CCAGTGCCATGACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGACA-CGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTAT
Reference ( family-1469 ) : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGACTGTTATTTTTATACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGACNNATGTGGGAAATACTTN-CCAGTGCCATGACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGACA-CGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTAT
gi|1 : CCTTATCTACAAGTATAATTGGGAGCGCAATAGTTTAGGTAGCTCCCAGTACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGTGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGACTGTTATTTTCATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTT-CCAGTGCCATGACCGAGGATCAAACTCGGGACCG-TGGAATACTAACCCAGTGACA-CGACCACTTGACTTGGGCGCCACCGTGAATAAAA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTATCATTTTGCTAAACATGCGACTGATTGATTTGTTTCACTGTTATTTAT
gi|10 : CTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAAACCAAAGAGGGCGCATTATATTTTTCGTAATTGTTATTTATGGTGACTGTTATTTTTATA
gi|11 : TGGGCGCCAC----AATAACA---ATAGTCGTGTAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCCCTGTTA
gi|12 : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGTACTTCC-AATCCAGCGGTTAGTGTACAAACCCAAAGCGTGCGCATTATGTTCTTCGTGATT-TTATTGATGGTgtgat
gi|13 : gGCGAC--ATGTGGCAAATACTTA-TCAATGCCATAACCGAGGATCAAACCCGGGACCC-TGAAATACTAATCCAATGACA-CGACCACTGGACTTGGGCGCCAC----A
gi|14 : caccgattgatTTAACTACAAGTATAATAGGGATCGCAGTAGTTTAGGTAGCTC
gi|15 : TTTACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAACTCCCAAAACTTCCAAATCCAGCTGTTAGTGTACAAACCCAAAGCGGGTGTAtataagcatccctggttcatttacttcacatgcgaggtgtacaacaccgattgatgcg
gi|16 : AATATATACATTATACAGGGTAGTATAGCAATTTGTTATTATTTTGTAAAACATGCCA---ACTGATTTATTTCACTGACATTTATatg
gi|2 : atttaCCTTAACTACAAGTATAACGGGGAGCGCAATAGTTTAGGTAGTTCCCAGAACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGACTGTTATTTTCATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTT-CCAGTGCCATGACCAAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGACAACGACCACTTGACTAGGGCGCCACCGTGAATAAAA---ATAATCGTGCAGTTCAATACAATATATAGGCTAT-CAACCTAATATAGCAATTTATTATCATTTTGCTAAAAATGCC----ACTGATTTGTTTCACTGTTATTTATt
gi|3 : TTAACTATAAGCATAACTGGGAGCGCAGTAGTTTAGGAAGCTCCAAGATCTCCCAAATCCAGCGATTAGTGTACAAACCAAATGCGGGCGCATTATATTTTTCGTGATTGTTACTAATGGTGACTGTTATTTTTAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACCTA-TCAATGCCATAACCGAGGATCAAACACGGGACCC-TGGAATACTAATCCAATGACA-CGACCACAGGACTTGGGCGTCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATTTAGCAATTTATTACTATTTTGCTAAACACGCCACTGACTGATTTATTTCACTGTTATTTAT
gi|4 : TTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAACTCCCAGAACTTCCAAATTCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATATTCTTCTTGATTGTTATTTATTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTA-CCAATGCCATAACCGAGGATCAAACTCGGGACCG-TGGAATACTAATCCAGTGACA-CGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCATGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATCTATt
gi|5 : CCTGAACTATAAGTATAATGTGGAGTGCAATAGTATAGATAGCTCGTAGAAATTCCAAATCCAGCAGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTATTCGTGATTGTTAT--ATGGTGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTTTCCTGTGCCATGACCGAAGATCAAACCCGGGACCC-TGGAATACTAATCCAATGACA-CAACAACTGGACTTGTGCGCCAC----AGTAAAA---ATAGAGGAGCAATTCAAAACAATATATCAGTCAT-CAACCTAATATAGCAATTAATTATTCTTTTGCGTAACGGGTCA---ACTGATTCATTTCCCTGTTATTTAT
gi|6 : CCTTTACTACAAGTATAATAGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTGGGAAATACTTT-CCAGTGCCATGACCGAAGATCAAAGCCGGGATCC-TGAAATAATAATCt
gi|7 : gTTACGTTCTTCGTGATAGTTATTAGTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--ATGTGGGAAACACTTT-CCAGTGCCATG-CAAAGCATCAAACCCGGCTTCTGTGGAATGCTTATCAAACTACA-CAATCACTATACTTGGGCGCCAC----AATGAAA---ATAGAGGTGGAATTCAGAACAATAT
gi|8 : ATGTGGGAAATACTTA-TCAATGCCATAACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGACA-CGACCACTGGACTTGGGCGCCAC----AGTAACAACAATAGTCGTGCAATTTAAAACAATATATCGGCTAT-CACCCTAATATAGCAATTTATTACTATTTTGCTAAACAGGTCACTGACTGATTTATTTCAGTGTTACTTAT
gi|9 : ATGTGAGAAATACTTA-CCAATGCCATTACCGAGGATCAAATCCGGGACCC-TGGAATACTTATCCAATGACA-CGACCACTGGACTTGGGCGCCAC----AATAACA---GTAGTCGTGCAGTTCAAAACAATATATCGGCTAT-CAACCTAATATAGCAATTTATTATTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTATt
Alignments
lowQualScore : 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1111
lowQualScore : 7 2 66 66 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 55 4 4 7777 1 777 4 1 3
lowQualScore : . . .. .. .................................................................................................. .. . . .... . ... . . .
lowQualScore : 3 1 99 99 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 00 0 4 0000 1 888 4 1 9
consensus : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTN-CCAGTGCCATGACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTAT
Reference ( family-1469 ) : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTN-CCAGTGCCATGACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTAT
gi|1 : CCTTATCTACAAGTATAATTGGGAGCGCAATAGTTTAGGTAGCTCCCAGTACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGTGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTT-CCAGTGCCATGACCGAGGATCAAACTCGGGACCG-TGGAATACTAACCCAGTGAC-ACGACCACTTGACTTGGGCGCCACCGTGAATAAAA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTATCATTTTGCTAAACATGCGACTGATTGATTTGTTTCACTGTTATTTAT
gi|10 : CTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAAACCAAAGAGGGCGCATTATATTTTTCGTAATTGTTATTTATGGTG--ACTGTTATTTTTA--TA
gi|11 : TGGGCGCCAC----AATAACA---ATAGTCGTGTAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCCCTGTTA
gi|12 : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGTACTTCC-AATCCAGCGGTTAGTGTACAAACCCAAAGCGTGCGCATTATGTTCTTCGTGATT-TTATTGATGGTgtgat
gi|13 : gGCGAC--ATGTGGCAAATACTTA-TCAATGCCATAACCGAGGATCAAACCCGGGACCC-TGAAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----A
gi|14 : caccgattgatTTAACTACAAGTATAATAGGGATCGCAGTAGTTTAGGTAGCTC
gi|15 : TTTACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAACTCCCAAAACTTCCAAATCCAGCTGTTAGTGTACAAACCCAAAGCGGGTGTAtataagcatccctggttcatttacttcacatgcgaggtgtacaacaccgattgatgcg
gi|16 : AATATATACATTATACAGGGTAGTATAGCAATTTGTTATTATTTTGTAAAACATGCCA---ACTGATTTATTTCACTGACATTTATatg
gi|2 : atttaCCTTAACTACAAGTATAACGGGGAGCGCAATAGTTTAGGTAGTTCCCAGAACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTT-CCAGTGCCATGACCAAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGACAACGACCACTTGACTAGGGCGCCACCGTGAATAAAA---ATAATCGTGCAGTTCAATACAATATATAGGCTAT-CAACCTAATATAGCAATTTATTATCATTTTGCTAAAAATGCC----ACTGATTTGTTTCACTGTTATTTATt
gi|3 : TTAACTATAAGCATAACTGGGAGCGCAGTAGTTTAGGAAGCTCCAAGATCTCCCAAATCCAGCGATTAGTGTACAAACCAAATGCGGGCGCATTATATTTTTCGTGATTGTTACTAATGGTG--ACTGTTATTTTTAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--ATGTGGGAAATACCTA-TCAATGCCATAACCGAGGATCAAACACGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACAGGACTTGGGCGTCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATTTAGCAATTTATTACTATTTTGCTAAACACGCCACTGACTGATTTATTTCACTGTTATTTAT
gi|4 : TTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAACTCCCAGAACTTCCAAATTCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATATTCTTCTTGATTGTTATTTATTGTN--NNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTA-CCAATGCCATAACCGAGGATCAAACTCGGGACCG-TGGAATACTAATCCAGTGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCATGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATCTATt
gi|5 : CCTGAACTATAAGTATAATGTGGAGTGCAATAGTATAGATAGCTCGTAGAAATTCCAAATCCAGCAGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTATTCGTGATTGTTAT--ATGGTG--ACTNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTTTCCTGTGCCATGACCGAAGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACAACAACTGGACTTGTGCGCCAC----AGTAAAA---ATAGAGGAGCAATTCAAAACAATATATCAGTCAT-CAACCTAATATAGCAATTAATTATTCTTTTGCGTAACGGGTCA---ACTGATTCATTTCCCTGTTATTTAT
gi|6 : CCTTTACTACAAGTATAATAGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGGTNNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--AGGTGGGAAATACTTT-CCAGTGCCATGACCGAAGATCAAAGCCGGGATCC-TGAAATAATAATCt
gi|7 : gTTACGTTCTTCGTGATAGTTATTAGTGGTN--NNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--ATGTGGGAAACACTTT-CCAGTGCCATG-CAAAGCATCAAACCCGGCTTCTGTGGAATGCTTATCAAACTAC-ACAATCACTATACTTGGGCGCCAC----AATGAAA---ATAGAGGTGGAATTCAGAACAATAT
gi|8 : --ATGTGGGAAATACTTA-TCAATGCCATAACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AGTAACAACAATAGTCGTGCAATTTAAAACAATATATCGGCTAT-CACCCTAATATAGCAATTTATTACTATTTTGCTAAACAGGTCACTGACTGATTTATTTCAGTGTTACTTAT
gi|9 : GAC--ATGTGAGAAATACTTA-CCAATGCCATTACCGAGGATCAAATCCGGGACCC-TGGAATACTTATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---GTAGTCGTGCAGTTCAAAACAATATATCGGCTAT-CAACCTAATATAGCAATTTATTATTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTATt
Alignments
lowQualScore : 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1111
lowQualScore : 7 2 66 66 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 55 4 4 7777 1 777 4 1 3
lowQualScore : . . .. .. .................................................................................................. .. . . .... . ... . . .
lowQualScore : 3 1 99 99 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 00 0 4 0000 1 888 4 1 9
consensus : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTN-CCAGTGCCATGACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTAT
Reference ( family-1469 ) : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTN-CCAGTGCCATGACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTAT
gi|1 : CCTTATCTACAAGTATAATTGGGAGCGCAATAGTTTAGGTAGCTCCCAGTACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGTGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTT-CCAGTGCCATGACCGAGGATCAAACTCGGGACCG-TGGAATACTAACCCAGTGAC-ACGACCACTTGACTTGGGCGCCACCGTGAATAAAA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTATCATTTTGCTAAACATGCGACTGATTGATTTGTTTCACTGTTATTTAT
gi|10 : CTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAAACCAAAGAGGGCGCATTATATTTTTCGTAATTGTTATTTATGGTG--ACTGTTATTTTTA--TA
gi|11 : TGGGCGCCAC----AATAACA---ATAGTCGTGTAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCCCTGTTA
gi|12 : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGTACTTCC-AATCCAGCGGTTAGTGTACAAACCCAAAGCGTGCGCATTATGTTCTTCGTGATT-TTATTGATGGTgtgat
gi|13 : gGCGAC--ATGTGGCAAATACTTA-TCAATGCCATAACCGAGGATCAAACCCGGGACCC-TGAAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----A
gi|14 : caccgattgatTTAACTACAAGTATAATAGGGATCGCAGTAGTTTAGGTAGCTC
gi|15 : TTTACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAACTCCCAAAACTTCCAAATCCAGCTGTTAGTGTACAAACCCAAAGCGGGTGTAtataagcatccctggttcatttacttcacatgcgaggtgtacaacaccgattgatgcg
gi|16 : AATATATACATTATACAGGGTAGTATAGCAATTTGTTATTATTTTGTAAAACATGCCA---ACTGATTTATTTCACTGACATTTATatg
gi|2 : atttaCCTTAACTACAAGTATAACGGGGAGCGCAATAGTTTAGGTAGTTCCCAGAACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTT-CCAGTGCCATGACCAAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGACAACGACCACTTGACTAGGGCGCCACCGTGAATAAAA---ATAATCGTGCAGTTCAATACAATATATAGGCTAT-CAACCTAATATAGCAATTTATTATCATTTTGCTAAAAATGCC----ACTGATTTGTTTCACTGTTATTTATt
gi|3 : TTAACTATAAGCATAACTGGGAGCGCAGTAGTTTAGGAAGCTCCAAGATCTCCCAAATCCAGCGATTAGTGTACAAACCAAATGCGGGCGCATTATATTTTTCGTGATTGTTACTAATGGTG--ACTGTTATTTTTAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--ATGTGGGAAATACCTA-TCAATGCCATAACCGAGGATCAAACACGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACAGGACTTGGGCGTCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATTTAGCAATTTATTACTATTTTGCTAAACACGCCACTGACTGATTTATTTCACTGTTATTTAT
gi|4 : TTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAACTCCCAGAACTTCCAAATTCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATATTCTTCTTGATTGTTATTTATTGTN--NNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTA-CCAATGCCATAACCGAGGATCAAACTCGGGACCG-TGGAATACTAATCCAGTGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCATGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATCTATt
gi|5 : CCTGAACTATAAGTATAATGTGGAGTGCAATAGTATAGATAGCTCGTAGAAATTCCAAATCCAGCAGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTATTCGTGATTGTTAT--ATGGTG--ACTNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTTTCCTGTGCCATGACCGAAGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACAACAACTGGACTTGTGCGCCAC----AGTAAAA---ATAGAGGAGCAATTCAAAACAATATATCAGTCAT-CAACCTAATATAGCAATTAATTATTCTTTTGCGTAACGGGTCA---ACTGATTCATTTCCCTGTTATTTAT
gi|6 : CCTTTACTACAAGTATAATAGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGGTNNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--AGGTGGGAAATACTTT-CCAGTGCCATGACCGAAGATCAAAGCCGGGATCC-TGAAATAATAATCt
gi|7 : gTTACGTTCTTCGTGATAGTTATTAGTGGTN--NNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--ATGTGGGAAACACTTT-CCAGTGCCATG-CAAAGCATCAAACCCGGCTTCTGTGGAATGCTTATCAAACTAC-ACAATCACTATACTTGGGCGCCAC----AATGAAA---ATAGAGGTGGAATTCAGAACAATAT
gi|8 : --ATGTGGGAAATACTTA-TCAATGCCATAACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AGTAACAACAATAGTCGTGCAATTTAAAACAATATATCGGCTAT-CACCCTAATATAGCAATTTATTACTATTTTGCTAAACAGGTCACTGACTGATTTATTTCAGTGTTACTTAT
gi|9 : GAC--ATGTGAGAAATACTTA-CCAATGCCATTACCGAGGATCAAATCCGGGACCC-TGGAATACTTATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---GTAGTCGTGCAGTTCAAAACAATATATCGGCTAT-CAACCTAATATAGCAATTTATTATTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTATt
blockSeqs : A T GT AA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN TT G A CGTG C ACA A G C
blockSeqs : A G . . NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN A . . . A . . T C
blockSeqs : A T . . NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN T . . . C . . T C
blockSeqs : A A . . NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC A . . . C . . C C
blockSeqs : A T . . NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN A . . . A . . G C
blockSeqs : A T . . NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN T . . . A . . G .
blockSeqs : . A . . T . . . C . . G .
blockSeqs : . . A . . . C . . G .
blockSeqs : A . .
blockSeqCons : ****
originalCons : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTN-CCAGTGCCATGACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTAT
finalCons : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTN-CCAGTGCCATGACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTAT
Alignments
lowQualScore : 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1111
lowQualScore : 7 2 66 66 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 55 4 4 7777 1 777 4 1 3
lowQualScore : . . .. .. .................................................................................................. .. . . .... . ... . . .
lowQualScore : 3 1 99 99 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 00 0 4 0000 1 888 4 1 9
consensus : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTN-CCAGTGCCATGACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTAT
Reference ( family-1469 ) : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTN-CCAGTGCCATGACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTAT
gi|1 : CCTTATCTACAAGTATAATTGGGAGCGCAATAGTTTAGGTAGCTCCCAGTACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGTGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTT-CCAGTGCCATGACCGAGGATCAAACTCGGGACCG-TGGAATACTAACCCAGTGAC-ACGACCACTTGACTTGGGCGCCACCGTGAATAAAA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTATCATTTTGCTAAACATGCGACTGATTGATTTGTTTCACTGTTATTTAT
gi|10 : CTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAAATCCAGCGGTTAGTGTACAAAACCAAAGAGGGCGCATTATATTTTTCGTAATTGTTATTTATGGTG--ACTGTTATTTTTA--TA
gi|11 : TGGGCGCCAC----AATAACA---ATAGTCGTGTAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCCCTGTTA
gi|12 : CCTTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAGCTCCCAGTACTTCC-AATCCAGCGGTTAGTGTACAAACCCAAAGCGTGCGCATTATGTTCTTCGTGATT-TTATTGATGGTgtgat
gi|13 : gGCGAC--ATGTGGCAAATACTTA-TCAATGCCATAACCGAGGATCAAACCCGGGACCC-TGAAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----A
gi|14 : caccgattgatTTAACTACAAGTATAATAGGGATCGCAGTAGTTTAGGTAGCTC
gi|15 : TTTACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAACTCCCAAAACTTCCAAATCCAGCTGTTAGTGTACAAACCCAAAGCGGGTGTAtataagcatccctggttcatttacttcacatgcgaggtgtacaacaccgattgatgcg
gi|16 : AATATATACATTATACAGGGTAGTATAGCAATTTGTTATTATTTTGTAAAACATGCCA---ACTGATTTATTTCACTGACATTTATatg
gi|2 : atttaCCTTAACTACAAGTATAACGGGGAGCGCAATAGTTTAGGTAGTTCCCAGAACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTG--ACTGTTATTTTCA--TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTT-CCAGTGCCATGACCAAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGACAACGACCACTTGACTAGGGCGCCACCGTGAATAAAA---ATAATCGTGCAGTTCAATACAATATATAGGCTAT-CAACCTAATATAGCAATTTATTATCATTTTGCTAAAAATGCC----ACTGATTTGTTTCACTGTTATTTATt
gi|3 : TTAACTATAAGCATAACTGGGAGCGCAGTAGTTTAGGAAGCTCCAAGATCTCCCAAATCCAGCGATTAGTGTACAAACCAAATGCGGGCGCATTATATTTTTCGTGATTGTTACTAATGGTG--ACTGTTATTTTTAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--ATGTGGGAAATACCTA-TCAATGCCATAACCGAGGATCAAACACGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACAGGACTTGGGCGTCAC----AATAACA---ATAGTCGTGCAATTCAAAACAATATATCGGTTAT-CAACCTAATTTAGCAATTTATTACTATTTTGCTAAACACGCCACTGACTGATTTATTTCACTGTTATTTAT
gi|4 : TTAACTACAAGTATAATGGGGAGCGCAATAGTTTAGGTAACTCCCAGAACTTCCAAATTCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATATTCTTCTTGATTGTTATTTATTGTN--NNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTGGGAAATACTTA-CCAATGCCATAACCGAGGATCAAACTCGGGACCG-TGGAATACTAATCCAGTGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---ATAGTCATGCAATTCAAAACAATATATCGGTTAT-CAACCTAATATAGCAATTTATTACTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATCTATt
gi|5 : CCTGAACTATAAGTATAATGTGGAGTGCAATAGTATAGATAGCTCGTAGAAATTCCAAATCCAGCAGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTATTCGTGATTGTTAT--ATGGTG--ACTNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGCGAC--ATGTGGGAAATACTTTTCCTGTGCCATGACCGAAGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACAACAACTGGACTTGTGCGCCAC----AGTAAAA---ATAGAGGAGCAATTCAAAACAATATATCAGTCAT-CAACCTAATATAGCAATTAATTATTCTTTTGCGTAACGGGTCA---ACTGATTCATTTCCCTGTTATTTAT
gi|6 : CCTTTACTACAAGTATAATAGGGAGCGCAATAGTTTAGGTAGCTCCCAGAACTTCCAA-TCCAGCGGTTAGTGTACAAACCCAAAGCGGGCGCATTATGTTCTTCGTGATTGTTATTTATGGTGGTNNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--AGGTGGGAAATACTTT-CCAGTGCCATGACCGAAGATCAAAGCCGGGATCC-TGAAATAATAATCt
gi|7 : gTTACGTTCTTCGTGATAGTTATTAGTGGTN--NNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--ATGTGGGAAACACTTT-CCAGTGCCATG-CAAAGCATCAAACCCGGCTTCTGTGGAATGCTTATCAAACTAC-ACAATCACTATACTTGGGCGCCAC----AATGAAA---ATAGAGGTGGAATTCAGAACAATAT
gi|8 : --ATGTGGGAAATACTTA-TCAATGCCATAACCGAGGATCAAACCCGGGACCC-TGGAATACTAATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AGTAACAACAATAGTCGTGCAATTTAAAACAATATATCGGCTAT-CACCCTAATATAGCAATTTATTACTATTTTGCTAAACAGGTCACTGACTGATTTATTTCAGTGTTACTTAT
gi|9 : GAC--ATGTGAGAAATACTTA-CCAATGCCATTACCGAGGATCAAATCCGGGACCC-TGGAATACTTATCCAATGAC-ACGACCACTGGACTTGGGCGCCAC----AATAACA---GTAGTCGTGCAGTTCAAAACAATATATCGGCTAT-CAACCTAATATAGCAATTTATTATTATTTTGCTAAACAGGCCACTGACTGATTTATTTCACTGTTATTTATt