lowQualScore : 2 11 1111 1 1 1 1111111 11 22222222222222222 111111 22222222222222 1 1 5555555555555555 1 11111111 22222 1 1111 55555555555 11 888888888888888888888888888888888888888888888 222222 111 1 3
lowQualScore : 3 11 888888 7 3 0 6 0 2 777 2 99 0000 7 88 3 55 5 0 3 1 3 5 3 0 1 1 999999 2 2 4 999 5 2 8 1 2 1 88 6 0 7 3 99 555 4444444 3 44 44 88 0 4 11 2 666 6 33333333333333333 4 0 9 444444 66666666666666 2 5 2 0 1 0 333 2 2222222222222222 33 1 4 4 8 33333333 1 00000 2 4444 6666 00000000000 2 1 11 0 1 666666666666666666666666666666666666666666666 2 77777 8888 11 333333 1 7 2 1 2 2 333 3 1 3 4 2
lowQualScore : . .. ...... . . . . . . ... . .. .... . .. . .. . . . . . . . . . . ...... . . . ... . . . . . . .. . . . . .. ... ....... . .. .. .. . . .. . ... . ................. . . . ...... .............. . . . . . . ... . ................ .. . . . . ........ . ..... . .... .... ........... . . .. . . ............................................. . ..... .... .. ...... . . . . . . ... . . . . .
lowQualScore : 7 00 777777 6 0 7 0 8 7 333 2 22 2222 8 22 3 44 4 7 0 4 0 0 2 3 4 1 444444 4 4 7 444 9 4 4 9 5 2 99 7 4 2 3 22 888 0000000 5 22 22 22 2 7 66 2 555 3 11111111111111111 3 4 1 333333 77777777777777 7 0 4 5 8 5 999 2 8888888888888888 22 2 4 0 0 77777777 6 99999 2 9999 6666 44444444444 5 8 88 4 0 999999999999999999999999999999999999999999999 9 11111 7777 44 666666 7 7 0 7 5 5 888 3 4 4 7 7
consensus : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATG-CGCTAG--AAACAGGC-T----AGGCGTCCTACTNGACACACAGTTAAAAGCTTGCTCTCTAAATGTAGCCC-AGA---CACCCGTGAAGGCG--CT--CNAGCCTCGCCGGTTCG-ACCNAAACGCGCGAGAAACAGGCTAGCCTTGCAAAACACACAACANTCAAACAACTCGTGCAGGCGTTCTATTTGACACACAGTCAAAAGCTTGCTCTCTAAATGT---AGCCCA-G-A-CA--CCCTACTNGCGCCTGGGAGTGCGCCAAAGAACCCAAGAGTTTCGCAAGGGGGTG-T--ATTT---GTGTGTG-----CCGTG--AAGGC--GCTCCAGCCTCGCCGGTTCGCCCCAAGCG--CG--------CGAGAAACAGGCTANCCT---TGCAAAAC-------ACACA--AAA-GTCAAACAACTCGTGCAGGCGTTC-TATTTGACACACAGTCAAAAGCTTGCTCTCTAAATGTAGCCC---A-GA-ACA-CCCTACTNGCGC--CTGGGAGTGCGCCAAAGA-A-CC--CAANAGTTTGG--C--AAGGGGGTGTNATTT-TGTGTGCG-GTG-AAGGCGGCGCAGGCTGGCCCAAGCGTCGCCTGTT---T-CGATCGA------------------TCGC------C----CTG-CCT-----AA--TCCCAAAAAGTCAAACA----ANTCGTGCAGGCGTTCTACTTGACACACAGTCAAAAGCTTGCTCTCTAAATGTAGCCC-AG-A---CACCCTACTAGCGCCTGGGAGTGCGCC-AAAGAACCCAAGT
Reference ( gi|1 ) : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTAGTCAATGACAATACTAAATAATTAACAAGAGTATTGGGTGTCCGTTTTACATTTAATTGACAAATTCTAAAGAACAGATGAGATGCTGTCCCGTTCTATAAATTCTTATACCATTCGAAATAGAATCGACCTACAATGTTGGTTTTTATTCCTATGCATATGACATTTGACCTCAGTGAACTCGATGTTTCAGTGACCTCCAAAGATACAGTGACCATCCTGTGTTAAACTTATATTTTTATCTGGCAACAGCGGTCTTAGTTTTTAAGTTATATATTCCCAAAGCTACAGTAATCGTCCATTGACATGCTTAGCACTATTCCTTTCTGATGTTGTATGACGCTAG--AAACAGGC-T----AGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCC-AGA---CACCCATGAAGGCG--CT--CAAGCCTCGTCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAACACACAACATTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGT---AGACCA-G-A-CA--ACTTACTAGCGCCTGGGTGTGCGCCAAAGAAGCCAGGAGCTTGGCAAGGGAGTG-T--ATTT---GTGTGGG-----CCGCG--AAGGC--GTCCCAGCCTCGACGGTTCGCCCCAAACG--CG--------CGAGTAACAGGCTATCCT---TGAAAAAC-------ACACC--AAA-GTTAAACAACTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTGCTCTCTAAATGTAGACC---A-GA-ACG-ACTTCTTTG-GC--CTGGGAGTGCGCCATAGA-A-CC--AAATAGTTTGG--A--AAGTGGGTGTTATTT-TGGGTGCG-GGT-AAGACCGCGCAGGCTGGCTCAAGCGTCACCTGTT---TCCGATCGA------------------TCGC------C----CTG-CCT-----AA--TACCAAAAAGTCAAACA----TGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AG-A---CACCCTACTAGCGCATGGGAGTG-GCC-AAAGAACCCAAGT
gi|2 : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAG
gi|2 : ATG-CGCTAG--AAACAGGC-T----A---GCCTTGCAAAACACACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggccgcgaaggcgtcccagcctcgacggttcgccccaaacgcgcgagtaacaggctatccttgaaaaacacaccaaagttaaacaactcgtacgggcgttctatttgacacacactcaaaagcttgctctctaaatgtagaccagaacgacttctttggcctgggagtgcgccatagaaccaaatagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgcatgggagtggccaaagaacccaagt
gi|11 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaATG-CGCTAG--AAACAGGC-T----A---GCCTTGCAAAACACACAacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggccgcgaaggcgtcccagcctcgacggttcgccccaaacgcgcgagtaacaggctatccttgaaaaacacaccaaagttaaacaactcgtacgggcgttctatttgacacacactcaaaagcttgctctctaaatgtagaccagaacgacttctttggcctgggagtgcgccatagaaccaaatagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgcatgggagtggccaaagaacccaagt
gi|7 : gcaagtgagtgttgatcagtgtgtaccgtgaaggcgctcgagcctcgccggttcgaccaaaACACCAGTTAAACAAGT-CGTACAGGCGTTCTGTTTGACACATACTCAAAATCTTGCTCTCTAAATGTAGCCC-AGA---CACCCacattcaaacaactcgtgcaggcgtcgtactagacacacagttaaaagcttgacctctaaatgtagcccagacaccctactagcgcctgggagtgtgccaaa
gi|9 : cgcaagtggctgtatttgtgtgtgccgtgaatgtgctccagcctcgctggttcgcaccaacgcgcgagaaaaaggctagccttgcaaaacacCGCTAG--AAACAGGC-T----AGtgttagcgcctgggagtgcgccaaagaacccagaacattcgcaagggggtgtatttgtgtgtgccgtgaaggcgttccagcctcgctggttcgccccaaacgcg
gi|6 : tagacaggttgtgttagagcaagtgagtgtcgatttgtgtgtgccgtgaaggcgcttgagcctcgccggttcgaccaaagtgAA--AAACTGGTGC----AGGCGTTCTATTTGACACGCAGTCAAAAGCTTGCTCTCTAAATGTACGCT-AGA---Cccttgcaaaacgtacaacattcaaacaagtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgactgggagtgcaccaaa
gi|3 : ggtgcagtgaaggcggagcaggctggcccaagcgtcacctgtatttgatgaccctgcctaatccaaaaagtaaaaGC-T-----GGCGTTCTACTAGACCCACAGTTAAAAGCTTGCTCTCTAAATTT-GCCCAAGAG--CACCTAcgactactttcgcctggggtgagcccaagagcccaagtgtttggcaagggggtgtaattttggtgcagtgaaggcggcgcaggctggcccaagcgtcacctgtattcgatgaccctgcctaatcccaaaaagtcaaacaactggtgcaggcgttctagcagtcaaaagtcaaaagctt
gi|12 : acaaaagtcaaacaactcgtacaggcgttctatttgacacacagttaaagcttgctctctaaatgtgcccaagagccactacttgcgactgggagtgcctcaaagaatccaataattttgccaggaggtgtatttttggtgtgcagtgaaggcggcgcaggctggcccaagcgtcgcctgttttcgattaccctgccttatcccgaaaagtcaaacaagtcgt-T----AGGCATTCTATTTGACACACAGTTAAAAGCTTGCTCTCTAAATGTcttgcgcctgagagtgccccaaagaacccaagaattttgtcagtgggtgtatttgtgtgtgccgtgaaggcgtactgacagggccggttcgccctaacgacacgagaaaccgactatccttgcaaaacaaaaaaagttaaacaactggtacaggcgttctatttgacacacatataaaagcttgatccctaaatgtccccaagagcccctttttgcacctgggagtgccccaaagaatccaagaattttgtcaaggtgtgtatttttgtatgcagtgaaggcggcgcaggctggcccaagcgtcacttgttttcgatcaccaaaaatccctaatctcaaaaagtcaaacaagtcgtgcaggcgttct
gi|4 : actctgcctaatcccaaaaagttaaacaacttgta----AGGCATCCTACTAGACACACAGTTAAAGGCTTGGTCTCTAAATGTAGCCC-AGA---CACCCccacaagagcacctacttgtgcctgggagtgcccaaaagtcagttgggatgtttgggaggag
gi|2 : caacagttaaacaactcgtacaggcgtgttgtttgacacacactcaaaagtttgccctctaaatgtagcccagacactctactagcgcctgggagtgcgccatagaacccaacacaatcgcaaggtggtttatttgtgtccgcgtgaagacactccagccttgccggttcgcaccaaacgggcgagaaacaagctagccttgcaaaacacccaaaagttaaacacctcgtacaggcattcctatttaacacatattcaaaagcttgctctctaaatgtagcaaagaacgaaaactagcgcctgggagtgcgccatatatcccaagtgtttggcagtcgggtgtcattttgggtgccgagaagaccgcgtaggctggctcaacgtcaactgtttccgatcgatcgccctgcctaatcccaaaaagtcaaacaagtcgtgc----AGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AGA---CACCCtactagcgcctgggagtgcgtcaaagaacccggaaaagctgcaagggggtgtatttgtgtgtgccgtgaaggcgctccaaccggtccgccc
gi|11 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggccgcgaaggcgtcccagcctcgacggttcgccccaaacgcgcgagtaacaggctatccttgaaaaacacaccaaagttaaacaactcgtacgggcgttctatttgacacacactcaaaagcttgctctctaaatgtagaccagaacgacttctttggcctgggagtgcgccatagaaccaaatagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgc----AGGCGTCGTACTAGACACACAGTTAAAAGCTTGACCTCTAAATGTAGCCC-AGA---CACCCtactagcgcatgggagtggccaaagaacccaagt
gi|9 : gcaagtgagtgttgatcagtgtgtaccgtgaaggcgctcgagcctcgccggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgc----AGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AGA---CACCCtactagcgcctgggagtgtgccaaa
gi|13 : tagacaggttgtgttagagcaagtgagtgtcgatttgtgtgtgccgtgaaggcgcttgagcctcgccggttcgaccaaagtgcgctagaaacaggctagccttgcaaaacgtacaacattcaaacaagtcgtgcGGCGTTCTATTTGACACACACTCAAAAGCTTGCTCTCTAAATGTAGACC-AGA---tactagcgactgggagtgcaccaaa
gi|8 : agccttgcaaaacacacaaaagttaaacaactcgtacgGTTCTATGTGACACACAGTTAAAAGCTTGCTCTCTCAATGT--CCC-AAA---attttagaaaac
gi|5 : ggcgacgggtgccgtgaacgacacgagaaacagactacctttgcaaaacaaaatgttaaacaactaatacagtcGTCCTACTTGACACACAGTCAAAACCTTGCCCTCTAAATGTAGCCC-AGA---CACCCgtgcacaaatttgcgcatgggagtgccctaaagaacccaagaactttgtcaggggtgtatttttgtgtgcagtgaaggcggcgcaggctggcccaagcgtcacctgttttatatcaccctacctta
gi|10 : gacTTAAAAGCTTGCTCTCTAAATAT--CCC-AAAGAGCACCTAtactaccgcctgggagtgccccaaagaatccaggtgtttgccaagggggtgtatttgtgggtgccgtgaaggcgctctagcctcgccggttcggcccaagaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacttctagatgaaccacgctcaaaaacttggtctccctgggcagtccagagggtgtagcagacacctgcgttgtccattgtaaccca
gi|18 : CTCTAAATGTAGCCC-AGA---CACCCattgcgccttggattgctccaaagaacccaagtattttgccagggggtgtatttttatgtgcagtgaaggtggcgcaggctgacccaagcgtcacctgtttttgatcaccctgtctaatcccaaaaagtcagataggtcgtgcaggcgttctacttgacccaca
gi|17 : CTCTAAATGTAGCCC-AGA---CACCCtactagcgtctgggagtgcgccaaccca
gi|16 : CTCTAAATGTAGCCC-AGA---CACCCtactagcgtctgggagtgcgccaaccca
gi|15 : CTCTAAATGTAGCCT-AGA---CACCtactagcgtctgggagtgcgccaaccca
gi|3 : CCGTGAAGGCGTACTGACAGG----GCCGGTTCG-CCCTAACGACACGAGAAACCGACTATCCTTGCAAAACAAAAAAAGTT-AAACAACTGGTACAGGCGTTCTATTTGACACACATATAAAAGCTTGATCCCTAAATGT---CCCCAA-G-AGCC--CCTT-TTTGCACCTGGGAGTGCCCCAAAGAATCCAAGAATTTTGTCAAGGTGTG-T--ATTT---TTGTATG-----CAGTG--AAGGC--GGCGCAGGCT----GG-----CCCAAGCGT-CACTTGTTTTCGATCACCAAAA-ATCCC---T---AATC-------TCA-A--AAA-GTCAAACAAGTCGTGCAGGCGTTC-Tttactagcgtctgggagtgcgccaaccca
gi|7 : acaaaagtcaaacaactcgtacaggcgttctatttgacacacagttaaagcttgctctctaaatgtgcccaagagccactacttgcgactgggagtgcctcaaagaatccaataattttgccaggaggtgtatttttggtgtgcagtgaaggcggcgcaggctggcccaagcgtcgcctgttttcgattaccctgccttatcccgaaaagtcaaacaagtcgtgctggcgttctactagacccacagttaaaagcttgctctctaaatttgcccaagagcacctacttgcgcctgagagtgccccaaagaacccaagaattttgtcagtgggtgtatttgtgtgtgCCGTGAATGTG--CT--CCAGCCTCGCTGGTTCGCACCAA--CGCGCGAGAAAAAGGCTAGCCTTGCAAAACACACACCAGTTAAACAAGTCGTACAGGCGTTCTGTTTGACACATACTCAAAATCTTGCTCTCTAAATGT---AGCCCA-G-A-CA--CCCTGTTAGCGCCTGGGAGTGCGCCAAAGAACCCAGAACATTCGCAAGGGGGTG-T--ATTT---GTGTGTG-----CCGTG--AAGGC--GTTCCAGCCTCGCTGGTTCGCCCCAAACG--CG--------
gi|2 : cgcaagtggctgtatttgtgtgtgCCGCGAAGGCG--TC--CCAGCCTCGACGGTTCG-CCCCAAACGCGCGAGTAACAGGCTATCCTTGAAAAACACACCAAAGTTAAACAACTCGTACGGGCGTTCTATTTGACACACACTCAAAAGCTTGCTCTCTAAATGT---AGACCA-GAA-CG--ACTTCTTTG-GCCTGGGAGTGCGCCATAGAACCAAATAGTTTGGAAAGTGGGTGTT--ATTTTGGGTGCGGGTAAGACCGCG--CAGGCTGGCTCAAGCGTCACCTGTT---TCCGATCGATCG--------C------C---CTG-CCT--------AAT-------ACCAA--AAA-GTCAAACATGTCGTGCAGGCGTCC-TACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC---A-G--ACA-CCCTACTAGCGC--ATGGGAGTG-GCCAAAGA-A-CC--CAA
gi|11 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggCCGTGAAGGCG--CT--CGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAACACACAACATTCAAACAACTCGTGCAGGCGTCGTACTAGACACACAGTTAAAAGCTTGACCTCTAAATGT---AGCCCA-G-A-CA--CCCTACTAGCGCCTGGGAGTGTGCCAAAgt
gi|9 : gcaagtgagtgttgatcagtgtgtaCCGTGAAGGCG--CT--TGAGCCTCGCCGGTTCG-ACCAAAGTGCGCTAGAAACAGGCTAGCCTTGCAAAACGTACAACATTCAAACAAGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGT---AGCCCA-G-A-CA--CCCTACTAGCGACTGGGAGTGCACCAAA
gi|5 : tagacaggttgtgttagagcaagtgagtgtcgatttgtgtgtgCCGTGAAGGCG--CT--CTAGCCTCGCCGGTTCG-GCCCAA
gi|8 : gacgtcctacttgacacacagtcaaaaccttgccctctaaatgtagcccagacaccctactaccgcctgggagtgccccaaagaatccaggtgtttgccaagggggtgtatttgtgggtgAGAAACAGACTACCTTTGCAAAACA-A-AATGTT-AAACAACTAATACAGTCGTTCTATGTGACACACAGTTAAAAGCTTGCTCTCTCAATGTCCCAAAGTG-C-A-CA--A---ATTTGCGCATGGGAGTGCCCTAAAGAACCCAAGAACTTTGTCAGGG-GTG-T--ATTT---TTGTGTG-----CAGTG--AAGGC--GGCGCAGGCTgaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacttctagatgaaccacgctcaaaaacttggtctccctgggcagtccagagggtgtagcagacacctgcgttgtccattgtaaccca
gi|13 : ggcgacgggtgccgtgaacgacacgAGCCTTGCAAAACACACAAAAGTTAAACAACTCGTACGGGCGTTCTATTTGACACACACTCAAAAGCTTGCTCTCTAAATGT---AGACCA-G-A-ggcccaagcgtcacctgttttatatcaccctacctta
gi|4 : CAACAGTTAAACAACTCGTACAGGCGTGTTGTTTGACACACACTCAAAAGTTTGCCCTCTAAATGT---AGCCCA-G-A-CA--CTCTACTAGCGCCTGGGAGTGCGCCATAGAACCCAACACAATCGCAAGGTGGTT-T--ATTT---GTGT--------CCGCGTGAAGAC--ACTCCAGCCTTGCCGGTTCGCACCAAACG--GG--------CGAGAAACAAGCTAGCCT---TGCAAAAC-------ACCCA--AAA-GTTAAACACCTCGTACAGGCATTCCTATTTAACACATATTCAAAAGCTTGCTCTCTAAATGTAGCAA---A-GA-ACG-AAAACTAGC-GC--CTGGGAGTGCGCCATATATC-CC--AAGT-GTTTGG--C--AGTCGGGTGTCATTT-TGGGTGCC-GAG-AAGACCGCGTAGGCTGGCTCAA-CGTCAACTGTT---TCCGATCGA------------------TCGC------C----CTG-CCT-----AA--TCCCAAAAAGTCAAACA----AGTCGTGCAGGCATCCTACTAGACACACAGTTAAAGGCTTGGTCTCTAAATGTAGCCC-AG-A---CACCCTACTAGCGCCTGGGAGTGCGTC-AAAGAACCCattttagaaaac
gi|3 : TCAAACAAGTCGTGCTGGCGTTCTACTAGACCCACAGTTAAAAGCTTGCTCTCTAAATTT----GCCCAAG-A-GC--ACCTACTTGCGCCTGAGAGTGCCCCAAAGAACCCAAGAATTTTGTCAGTGGGTG-T--ATTT---GTGTGTG-----CCGTG--AAGGC--GTACTGACAGGGCCGGTTCGCCCTAA-CGA-CA--------CGAGAAACCGACTATCCT---TGCAAAAC-------AAAA---AAA-GTTAAACAACTGGTACAGGCGTTC-TATTTGACACACATATAAAAGCTTGATCCCTAAATGTCCCCA---A-GA-GCC-CCTT-TTTGCAC--CTGGGAGTGCCCCAAAGA-A-TC--CAAGAATTTTGTCA--AGGTGTGTAT--TTT-TGTATGCA-GTG-AAGGCGGCGCAGGCTGGCCCAAGCGTCACTTGTT---T----TCGA------------------TCAC------CAAAAATC-CCT-----AA--TCTCAAAAAGTCAAACA----AGTCGTGCAGGCGTTCTggaaaagctgcaagggggtgtatttgtgtgtgccgtgaaggcgctccaaccggtccgccc
gi|10 : acaaaagtcaaacaactcgtacaggcgttctatttgacacacagttaaagcttgctctctaaatgtgcccaagagccactacttgcgactgggagtgcctcaaagaatccaataattttgccaggaggtgtatttttggtgtgcagtgaaggcggcgcaggctggcccaagcgtcgcctgttttcgattaccctgccttatcccgaaaagTCAGATAGGTCGTGCAGGCGTTCTACTTGACCCACA
gi|12 : ttaaaagcttgctctctaaatatcccaaagagcacctaattgcgccttggattgctccaaagaacccaagtattttgccagggggtgtatttttatgtgcagtgaaggtggcgcaggctgacccaagcgtcacctgtttttgatcaccctgtctaatcccaaaaagTTAAACAACTTGTATAGGCATTCTATTTGACACACAGTTAAAAGCTTGCTCTCTAAATGT---CCACAA-G-A-GC--ACCTACTTGTGCCTGGGAGTGC-CCAA--AAGTCAG
gi|14 : actctgcctaatcccaaaaagTCAAAGAACTGGTGCAAGCATTCTATTTGACACACAGTttgggatgtttgggaggag
gi|6 : gcctaaccccaaaaagAAAAAACTGGTGCAGGCGTTCTATTTGACACGCAGTCAAAAGCTTGCTCTCTAAATGT---ACGCTA-G-ACCG--AC-TACTTTCGCCTGGG-GTGAGCCCAAGAGCCCAAGTGTTTGGCAAGGGGGTG-T--AATT---TTG-GTG-----CAGTG--AAGGC--GGCGCAGGCT----GG-----CCCAAGCGT-CA--------CCTGTATTCGATGACCCTGCCT---AATC-------CCA-A--AAA-GTCAAACAACTGGTGCAGGCGTTC-TAGCAGTCA-AAAGTCAAAAGCTTc
gi|5 : ggtgcagtgaaggcggagcaggctggcccaagcgtcacctgtatttgatgaccctgcctaatccaaaaagtaaaGACGTCCTACTTGACACACAGTCAAAACCTTGCCCTCTAAATGT---AGCCCA-G-A-CA--CCCTACTACCGCCTGGGAGTGCCCCAAAGAATCCAGGTGTTTGCCAAGGGGGTG-T--ATTT---GTGGGTG-----CCGTG--AAGGC--GCTCTAGCCTCGCCGGTTCGGCCCAA
gi|10 : TTAAAAGCTTGCTCTCTAAATAT-----CCCA-A-A-GAGCACCTAATTGCGCCTTGGATTGCTCCAAAGAACCCAAGTATTTTGCCAGGGGGTG-T--ATTT---TTATGTG-----CAGTG--AAGGT--GGCGCAGGCT-GA--------CCCAAGC----------------GTCAC---CTGTTTT---TGATCACCCTGTCTAATCCCAAAAA-GTCAGATAGGTCGTGCAGGCGTTC-TACTTGACCCACAgaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacttctagatgaaccacgctcaaaaacttggtctccctgggcagtccagagggtgtagcagacacctgcgttgtccattgtaaccca
gi|18 : CTCTAAATGT---AGCCCA-G-A-CA--CCCTACTAGCGTCTGGGAGTGCGCCAA
gi|17 : CTCTAAATGT---AGCCCA-G-A-CA--CCCTACTAGCGTCTGGGAGTGCGCCAAccca
gi|16 : CTCTAAATGT---AGCCCA-G-A-CA--CCCTACTAGCGTCTGGGAGTGCGCCAAccca
gi|15 : CTCTAAATGT---AGCCTA-G-A-CA--CCTTACTAGCGTCTGGGAGTGCGCCAAccca
gi|7 : GCAAGTGGCTG-T--ATTT---GTGTGTG-----CCGTG--AATGT--GCTCCAGCCTCGCTGGTTCGCACCAA-CG--CG--------CGAGAAAAAGGCTAGCCT---TGCAAAAC-------ACACA--CCA-GTTAAACAAGTCGTACAGGCGTTC-TGTTTGACACATACTCAAAATCTTGCTCTCTAAATGTAGCCC---A-G--ACA-CCCTGTTAGCGC--CTGGGAGTGCGCCAAAGA-A-CCCAGAACA--TTCG--C--AAGGGGGTG-TA-TT-TGTGTGTG---------CCGTGAAGGC--GTTCCAGCCTCGCTGGTT---ccca
gi|11 : cGCAAGTGAGTG-TTGATCA---GTGTGTA-----CCGTG--AAGGC--GCTCGAGCCTCGCCGGTTCGACCAAAATG--CG--------CTAGAAACAGGCTAGCCT---TGCAAAAC-------ACACA--ACA-TTCAAACAACTCGTGCAGGCGTCG-TACTAGACACACAGTTAAAAGCTTGACCTCTAAATGTAGCCC---A-G--ACA-CCCTACTAGCGC--CTGGGAGTGTGCCAcgccccaaacgcg
gi|9 : GCAAGTGAGTG-TCGATTT---GTGTGTG-----CCGTG--AAGGC--GCTTGAGCCTCGCCGGTTCGACCAAAGTG--CG--------CTAGAAACAGGCTAGCCT---TGCAAAAC-------GTACA--ACA-TTCAAACAAGTCGTGCAGGCGTCC-TACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC---A-G--AC--ACCCTACTA-GCGACTGGGAGTGCACCAaa
gi|2 : tagacaggttgtgttaga-----CCATG--AAGGC--GCTCAAGCCTCGTCGGTTCGACCAAAATG--CG--------CTAGAAACAGGCTAGCCT---TGCAAAAC-------ACACA--ACA-TTCAAACAACTCGTGCAGGCGTCC-TACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGACC---A-G--ACA-ACTTACTAGCGC--CTGGGTGTGCGCCAAAGA-A-GC--CAGGAGCTTGG--C--AAGGGAGTG-TATTT----GTGTG-GG------CCGCGAAGGC--GTCCCAGCCTCGACGGTTCGCCCCAAACG--------------------CGCGAGTAACAGG-CTATCCTTGAAAAA--CACACCAAAGTTAAACA----ACTCGTACGGGCGTTCTATTTGACACACACTCAAAAGCTTGCTCTCTAAATGTAGACC-AGAA---CGACTTCTTTG-GCCTGGGAGTGCGCC-ATAGAACCAAAaa
gi|8 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacCGACGGGT-GCCGTGAACGA-CA--------CGAGAAACAGACTACCTT---TGCAAAAC-------A------AAATGTTAAACAACTAATACAGTCGTTC-TATGTGACACACAGTTAAAAGCTTGCTCTCTCAATGT--CCC---A-AA-GTGCACAAATTTGCGC--ATGGGAGTGCCCTAAAGA-A-CC--CAAGAACTTTG--T--CAG-GGGTGTATTTT-TGTGTGCA-GTG-AAGGCGGCGCAGGCTGGCCCAAGCGTCACCTGTT---TT--AT--A------------------TCAC------C----CTA-CCT-----tagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgcatgggagtggccaaagaacccaagt
gi|13 : ggCCT---TGCAAAAC-------ACACA--AAA-GTTAAACAACTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTGCTCTCTAAATGTAGACC---A-GA-Ata
gi|3 : agACA--AAA-GTCAAACAACTCGTACAGGCGTTC-TATTTGACACACAGTTAAA-GCTTGCTCTCTAAATGT-GCCC---AAGA-GCC-ACTACTTGC-GA--CTGGGAGTGCCTCAAAGA-A-TC--CAATAATTTTG--C--CAGGAGGTGT-ATTT-TTGGTGTGCAGTGAAGGCGGCGCAGGCTGGCCCAAGCGTCGCCTGTT---T----TCGA------------------TTAC------C----CTG-CCT-----TA--TCCCGAAAAGTCAAACA----AGTCGTGCTGGCGTTCTACTAGACCCACAGTTAAAAGCTTGCTCTCTAAATTT-GCCCAAG-AG--CA-CCTACTTGCGCCTGAGAGTGCCCC-AAAGAACCCAAGttttagaaaac
gi|12 : --AAA-GTTAAACAACTTGTATAGGCATTC-TATTTGACACACAGTTAAAAGCTTGCTCTCTAAATGTCCACA---A-GA-GCA-CCTACTTGT-GC--CTGGGAGTGC-CCAaattttgtcagtgggtgtatttgtgtgtgccgtgaaggcgtactgacagggccggttcgccctaacgacacgagaaaccgactatccttgcaaaacaaaaaaagttaaacaactggtacaggcgttctatttgacacacatataaaagcttgatccctaaatgtccccaagagcccctttttgcacctgggagtgccccaaagaatccaagaattttgtcaaggtgtgtatttttgtatgcagtgaaggcggcgcaggctggcccaagcgtcacttgttttcgatcaccaaaaatccctaatctcaaaaagtcaaacaagtcgtgcaggcgttct
gi|14 : actctgcctaatcccaa--AAA-GTCAAAGAACTGGTGCAAGCATTC-TATTTGACACACAGTCaaagtcagttgggatgtttgggaggag
gi|6 : gcctaaccccaaAAAAAACTGGTGCAGGCGTTC-TATTTGACACGCAGTCAAAAGCTTGCTCTCTAAATGTACGCT---A-GA-CCG-ACTACTTTC-GC--CTGGG-GTGAGCCCAAGA-G-CC--CAAGTGTTTGG--C--AAGGGGGTGTAATTT-T-GGTGCA-GTG-AAGGCGGCGCAGGCTGGCCCAAGCGTCACCTGTA---TTCGAT-GA---------------------C------C----CTG-CCT-----AA--TCCCAAAAAGTCAAACA----ACTGGTGCAGGCGTTCTAGCAGTCA-AAAGTCAAAAGCTT
gi|5 : ggtgcagtgaaggcggagcaggctggcccaagcgtcacctgtatttgatgaccctgcctaatccaaaaagtaaaGACGTCC-TACTTGACACACAGTCAAAACCTTGCCCTCTAAATGTAGCCC---A-GACAC--CCTACTACC-GC--CTGGGAGTGCCCCAAAGA-ATCC--AGGT-GTTTGC--C--AAGGGGGTG-TATTTGTGGGTG-----------CCGTGAAGGC--GCTCTAGCCTCGCCGGTT---
gi|10 : TTAAAAGCTTGCTCTCTAAATAT---CCCAAA-GA-GC--ACCTAATTGCGC--CTTGGATTGCTCCAAAGA-ACCC--AAGTATTTTGC--C--AGG-GGGTGTATTTT-TATGTGCA-GTG-AAGGTGGCGCAGGCTGACCCAAGCGTCACCTGTT---T----TTGA------------------TCAC------C----CTG-TCT-----AA--TCCCAAAAAGTCAGATA----GGTCGTGCAGGCGTTCTACTTGACCCACAcggcccaagaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacttctagatgaaccacgctcaaaaacttggtctccctgggcagtccagagggtgtagcagacacctgcgttgtccattgtaaccca
gi|18 : CTCTAAATGTAGCCC---A-G--ACA-CCCTACTAGCGT--CTGGGAGTGCGCCA
gi|17 : CTCTAAATGTAGCCC---A-G--ACA-CCCTACTAGCGT--CTGGGAGTGCGCCAaccca
gi|16 : CTCTAAATGTAGCCC---A-G--ACA-CCCTACTAGCGT--CTGGGAGTGCGCCAaccca
gi|15 : CTCTAAATGTAGCCT---A-G--ACA-CCTTACTAGCGT--CTGGGAGTGCGCCAaccca
gi|9 : TTAG--AGCAAGTGAGTGTCGATT-TGTGTGTG---------CCGTGAAGGC--GCTTGAGCCTCGCCGGTT-----CGACCAAAGTGCGCTAGAAACAGGCTAGC------C----TTG-CAA-----AACGTAC--AACATTCAAACA----AGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AG-A---CACCCTACTAGCGACTGGGAGTGCACC-AAAaccca
gi|11 : tagacaggttgtg--AAGTGAGTGTTGATC-AGTGTGT---------ACCGTGAAGGC--GCTCGAGCCTCGCCGGTT-----CGACCAAAATGCGCTAGAAACAGGCTAGC------C----TTG-CAA-----AA--CACACAACATTCAAACA----ACTCGTGCAGGCGTCGTACTAGACACACAGTTAAAAGCTTGACCTCTAAATGTAGCCC-AG-A---CACCCTACTAGCGCCTGGGAGTGTGCC-AAA
gi|6 : gcGGTGCA-GTG-AAGGCGGAGCAGGCTGGCCCAAGCGTCACCTGTA---TTTGAT-GA---------------------C------C----CTG-CCT-----AA--T-CCAAAAAGTAAAAAAAAACTG--GTGCAGGCGTTCTATTTGACACGCAGTCAAAAGCTTGCTCTCTAAATGTACGCT-AG-A---CCGACTACTTTCGCCTGGG-GTGAGCC-CAAGAGCCCAAGT
gi|7 : GC------C----TTG-CAA-----AA--CACACACCAGTTAAACA----AGTCGTACAGGCGTTCTGTTTGACACATACTCAAAATCTTGCTCTCTAAATGTAGCCC-AG-A---CACCCTGTTAGCGCCTGGGAGTGCGCC-AAAGAACCCAgtttggcaagggggtgtaattttggtgcagtgaaggcggcgcaggctggcccaagcgtcacctgtattcgatgaccctgcctaatcccaaaaagtcaaacaactggtgcaggcgttctagcagtcaaaagtcaaaagctt
gi|13 : cgcaagtggctgtatttgtgtgtgccgtgaatgtgctccagcctcgctggttcgcaccaacgcgcgagaaaaaggctaGC------C----TTG-CAA-----AA--CACACAAAAGTTAAACA----ACTCGTACGGGCGTTCTATTTGACACACACTCAAAAGCTTGCTCTCTAAATGTAGACC-AG-A---gaacattcgcaagggggtgtatttgtgtgtgccgtgaaggcgttccagcctcgctggttcgccccaaacgcg
gi|12 : aC------T----CTG-CCT-----AA--TCCCAAAAAGTTAAACA----ACTTGTATAGGCATTCTATTTGACACACAGTTAAAAGCTTGCTCTCTAAATGTCCACA-AG-AG--CA-CCTACTTGTGCCTGGGAGTG-CCC-AAAattttagaaaac
gi|14 : aG-CCT-----AA--CCCCAAAAAGTCAAAGA----ACTGGTGCAAGCATTCTATTTGACACACAGTagtcagttgggatgtttgggaggag
gi|8 : CAAAATGTTAAACA----ACTAATACAGTCGTTCTATGTGACACACAGTTAAAAGCTTGCTCTCTCAATGT--CCC-AA-AGTGCACAA-ATTTGCGCATGGGAGTG-CCCTAAAGAACCCAAGc
gi|5 : ggcgacgggtgccgtgaacgacacgagaaacagactacctttgcaaaaGACGTCCTACTTGACACACAGTCAAAACCTTGCCCTCTAAATGTAGCCC-AG-A---CACCCTACTACCGCCTGGGAGTGCCCC-AAAGAATCCAGGTaactttgtcaggggtgtatttttgtgtgcagtgaaggcggcgcaggctggcccaagcgtcacctgttttatatcaccctacctta
gi|10 : TTAAAAGCTTGCTCTCTAAATAT--CCC-AA-AGAGCA-CCTAATTGCGCCTTGGATTGCTCC-AAAGAACCCAAGTgtttgccaagggggtgtatttgtgggtgccgtgaaggcgctctagcctcgccggttcggcccaagaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacttctagatgaaccacgctcaaaaacttggtctccctgggcagtccagagggtgtagcagacacctgcgttgtccattgtaaccca
gi|18 : CTCTAAATGTAGCCC-AG-A---CACCCTACTAGCGTCTGGGAGTGCGCC-AAattttgccagggggtgtatttttatgtgcagtgaaggtggcgcaggctgacccaagcgtcacctgtttttgatcaccctgtctaatcccaaaaagtcagataggtcgtgcaggcgttctacttgacccaca
gi|17 : CTCTAAATGTAGCCC-AG-A---CACCCTACTAGCGTCTGGGAGTGCGCC-AAccca
gi|16 : CTCTAAATGTAGCCC-AG-A---CACCCTACTAGCGTCTGGGAGTGCGCC-AAccca
gi|15 : CTCTAAATGTAGCCT-AG-A---CACCTTACTAGCGTCTGGGAGTGCGCC-AAccca
Alignments
lowQualScore : 4 1 1 1 111111111111 11111111 222
lowQualScore : 0 6 1 6 6 1 0 0 2 8 8 2 1 2 1 5 0 1 4 4 1 4 1 0 66 0 33 6 66 4 22 3333 2 3 7 4 0 1 555 3 66 0 4 3 8 4 55 0 999999999999 1 1 2 11 5 0 2 66 5 6 4 0 88888888 6 5 777 4 1 9999 1 0 4 1 4 1
lowQualScore : . . . . . . . . . . . . . . . . . . . . . . . . .. . .. . .. . .. .... . . . . . . ... . .. . . . . . .. . ............ . . . .. . . . .. . . . . ........ . . ... . . .... . . . . . .
lowQualScore : 0 0 0 0 0 0 0 8 0 8 0 5 0 0 0 4 7 9 4 4 1 4 0 2 99 2 44 5 11 4 11 6666 1 0 8 0 2 0 888 4 11 7 4 9 1 0 55 8 777777777777 0 1 9 88 0 2 5 66 0 1 2 2 11111111 0 0 111 5 1 4444 0 1 0 4 4 1
consensus : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACAGTCAAACAACTCGTGCAGGCGTCCTACTNGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGCGCCAAAGAACCC--AGGAGCTTNGCAAGGGGGTGT--ATTTGT-GTGTGCCGTGAAGGCGCTCCAGCCTCGCCGGTTCGCCCCAAGCG-CGCGAGNAACAGGCTANCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACANTCAAAAGCTTGCTCTCTAAATGTAGCCC-A--GAGC---GCC--CTA-CTTGCGCCTGGGAGTGCGCCAAAGAACCCAAGAG-TTTGGCAAGNGGGTGTAATTT-TGTGTGCGGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGT-TTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTACTNGACACACAGTTAAAAGCTTGCTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAAGT
Reference ( family-1034 ) : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATG-CGCTAGAAACAGGCTAGGCGTCCTACTNGACACACAGTTAAAAGCTTGCTCTCTAAATGTAGCCCAGACACCCGTGAAGGCGCTCNAGCCTCGCCGGTTCG-ACCNAAACGCGCGAGAAACAGGCTAGCCTTGCAAAA-CACACAACANTCAAACAACTCGTGCAGGCGTTCTATTTGACACACAGTCAAAAGCTTGCTCTCTAAATGTAGCCC-AGA-CACC-CTACTNGCGCCTGGGAGTGCGCCAAAGAACCC--AAGAGTTTCGCAAGGGGGTGT--ATTTGT-GTGTGCCGTGAAGGCGCTCCAGCCTCGCCGGTTCGCCCCAAGCG-CGCGAGAAACAGGCTANCCTTGCAAAACACACAAAAGTCAAACAA--CTCGTGCAGGCGTTC-TATTTGACACACAGTCAAAAGCTTGCTCTCTAAATGTAGCCC-A--GAAC---ACC--CTA-CTNGCGCCTGGGAGTGCGCCAAAGAACCCAANAG-TTTGGCAAGGGGGTGTNATTT-TGTGTGCGGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCGCCTGT-TT-CGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAANTCGTGCAGGCGTTCTACTTGACACACAGTCAAAAGCTTGCTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAAGT
gi|1 : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAG
gi|1 : ATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCATGAAGGCGCTCAAGCCTCGTCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGACC-AGA-CAAC-TTACTAGCGCCTGGGTGTGCGCCAAAGAAGCC--AGGAGCTTGGCAAGGGAGTGT--ATTTGT-GTGGGCCGCGAAGGCGTCCCAGCCTCGACGGTTCGCCCCAAACG-CGCGAGTAACAGGCTATCCTTGAAAAACACACCAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTGCTCTCTAAATGTAGACC-A--GAAC---GAC--TTC-TTTG-GCCTGGGAGTGCGCCATAGAACCAAATAG-TTTGGAAAGTGGGTGTTATTT-TGGGTGCGGGTAAGACC--------GCGCAGGCTGGCTCAAGCGTCACCTGT-TTCCGATCGATCGCC----CTGCCTAATACCAAAAAGTCAAACATGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCATGGGAGTG-GCCAAAGAACCCAAGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggccgcgaaggcgtcccagcctcgacggttcgccccaaacgcgcgagtaacaggctatccttgaaaaacacaccaaagttaaacaactcgtacgggcgttctatttgacacacactcaaaagcttgctctctaaatgtagaccagaacgacttctttggcctgggagtgcgccatagaaccaaatagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgcatgggagtggccaaagaacccaagt
gi|10 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtTTAAAAGCTTGCTCTCTAAATAT--CCC-AAAGAGC---ACC---TA-ATTGCGCCTTGGATTGCTCCAAAGAACCCAAGTA-TTTTGCCAGGGGGTGTATTTT-TATGTGCAGTGAAGGTG--------GCGCAGGCTGACCCAAGCGTCACCTGT-TT----TTGATCACC----CTGTCTAATCCCAAAAAGTCAGATAGGTCGTGCAGGCGTTCTACTTGACCCACA
gi|11 : CCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCGTACTAGACACACAGTTAAAAGCTTGACCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGTGCCAAA
gi|12 : gcaagtgagtgttgatcagtgtgtaCT----CTGCCTAATCCCAAAAAGTTAAACAACTTGTATAGGCATTCTATTTGACACACAGTTAAAAGCTTGCTCTCTAAATGTCCACAAGAGCA-CCTACTTGTGCCTGGGAGTGC-CCAAA
gi|13 : aAGCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTGCTCTCTAAATGTAGACC-A--GAAagtcagttgggatgtttgggaggag
gi|14 : GCCTAACCCCAAAAAGTCAAAGAACTGGTGCAAGCATTCTATTTGACACACAGTCttttagaaaac
gi|15 : CTCTAAATGTAGCCTAGA-CACCTTACTAGCGTCTGGGAGTGCGCCAA
gi|16 : CTCTAAATGTAGCCCAGA-CACCCTACTAGCGTCTGGGAGTGCGCCAAccca
gi|17 : CTCTAAATGTAGCCCAGA-CACCCTACTAGCGTCTGGGAGTGCGCCAAccca
gi|18 : CTCTAAATGTAGCCCAGA-CACCCTACTAGCGTCTGGGAGTGCGCCAAccca
gi|2 : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGccca
gi|2 : ATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCATGAAGGCGCTCAAGCCTCGTCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGACC-AGA-CAAC-TTACTAGCGCCTGGGTGTGCGCCAAAGAAGCC--AGGAGCTTGGCAAGGGAGTGT--ATTTGT-GTGGGCCGCGAAGGCGTCCCAGCCTCGACGGTTCGCCCCAAACG-CGCGAGTAACAGGCTATCCTTGAAAAACACACCAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTGCTCTCTAAATGTAGACC-A--GAAC---GAC--TTC-TTTG-GCCTGGGAGTGCGCCATAGAACCAAATAG-TTTGGAAAGTGGGTGTTATTT-TGGGTGCGGGTAAGACC--------GCGCAGGCTGGCTCAAGCGTCACCTGT-TTCCGATCGATCGCC----CTGCCTAATACCAAAAAGTCAAACATGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCATGGGAGTG-GCCAAAGAACCCAAGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggccgcgaaggcgtcccagcctcgacggttcgccccaaacgcgcgagtaacaggctatccttgaaaaacacaccaaagttaaacaactcgtacgggcgttctatttgacacacactcaaaagcttgctctctaaatgtagaccagaacgacttctttggcctgggagtgcgccatagaaccaaatagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgcatgggagtggccaaagaacccaagt
gi|3 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtACAAAAGTCAAACAACTCGTACAGGCGTTCTATTTGACACACAGTTAAA-GCTTGCTCTCTAAATGT-GCCC-AAG-AGCCACTACTTGCGACTGGGAGTGCCTCAAAGAATCC--AATAATTTTGCCAGGAGGTGT--ATTTTTGGTGTGCAGTGAAGGCGGCGCAG----GCTGG-----CCCAAGCGTCGCCTGTTTTCGATTACCC-TGCCTTATCCCGAAAAGTCAAACAA--GTCGTGCTGGCGTTC-TACTAGACCCACAGTTAAAAGCTTGCTCTCTAAATTT-GCCCAA--GAGC---A-C--CTA-CTTGCGCCTGAGAGTGCCCCAAAGAACCCAAGAA-TTTTGTCAGTGGGTGT-ATTTGTGTGTGCCGTGAAGGCGTACTGACAGGGCCGGTTCGCCCTAACGACACGAG-----AAACCGACTATC----CTTGCAAAACAAAAAAAGTTAAACAACTGGTACAGGCGTTCTATTTGACACACATATAAAAGCTTGATCCCTAAATGTCCCCAAGA-GCCCCTTTTTGCACCTGGGAGTGCCCCAAAGAATCCAAG
gi|3 : AAAAGTCAAACAAGTCGTGCTGGCGTTCTACTAGACCCACAGTTAAAAGCTTGCTCTCTAAATTT-GCCCAAGAGCA-C-CTACTTGCGCCTGAGAGTGCCCCAAAGAACCC--AAGAATTTTGTCAGTGGGTGT--ATTTGT-GTGTGCCGTGAAGGCGTACTGACAGGGCCGGTTCGCCCTAA-CGACACGAGAAACCGACTATCCTTGCAAAACA-AAAAAAGTTAAACAA--CTGGTACAGGCGTTC-TATTTGACACACATATAAAAGCTTGATCCCTAAATGTCCCCA-A--GAGC----CC--CTT-TTTGCACCTGGGAGTGCCCCAAAGAATCCAAGAA-TTTTGTCAAGGTGTGTATTTT-TGTATGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACTTGT-TT----TCGATCACCAAAAATCCCTAATCTCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTaattttgtcaaggtgtgtatttttgtatgcagtgaaggcggcgcaggctggcccaagcgtcacttgttttcgatcaccaaaaatccctaatctcaaaaagtcaaacaagtcgtgcaggcgttct
gi|4 : acaaaagtcaaacaactcgtacaggcgttctatttgacacacagttaaagcttgctctctaaatgtgcccaagagccactacttgcgactgggagtgcctcaaagaatccaataattttgccaggaggtgtatttttggtgtgcagtgaaggcggcgcaggctggcccaagcgtcgcctgttttcgattaccctgccttatcccgCAACAGTTAAACAACTCGTACAGGCGTGTTGTTTGACACACACTCAAAAGTTTGCCCTCTAAATGTAGCCC-AGA-CACT-CTACTAGCGCCTGGGAGTGCGCCATAGAACCC--AACACAATCGCAAGGTGGTTT--ATTTGT-GTCCGC-GTGAAGACACTCCAGCCTTGCCGGTTCGCACCAAACG-GGCGAGAAACAAGCTAGCCTTGCAAAACACCCAAAAGTTAAACAC--CTCGTACAGGCATTCCTATTTAACACATATTCAAAAGCTTGCTCTCTAAATGTAGCAA-A--GAACGAAA------A-CTAGCGCCTGGGAGTGCGCCATATATCCCAAGTG-TTTGGCAGTCGGGTGTCATTT-TGGGTGCCGAGAAGACC--------GCGTAGGCTGGCTCAA-CGTCAACTGT-TTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCATCCTACTAGACACACAGTTAAAGGCTTGGTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGTCAAAGAACCC
gi|4 : GCCCTGCCTAATCCCAAAA-AGTCAAACAAGTCGTGCAGGCATCCTACTAGACACACAGTTAAAGGCTTGGTCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGCGTCAAAGAACCCGGAAAAGCT--GCAAGGGGGTGT--ATTTGT-GTGTGCCGTGAAGGCGCTCCA-----ACCGGTCCGCCCggaaaagctgcaagggggtgtatttgtgtgtgccgtgaaggcgctccaaccggtccgccc
gi|5 : caacagttaaacaactcgtacaggcgtgttgtttgacacacactcaaaagtttgccctctaaatgtagcccagacactctactagcgcctgggagtgcgccatagaacccaacacaatcgcaaggtggtttatttgtgtccgcgtgaagacactccagccttgccggttcgcaccaaacgggcgagaaacaagctagccttgcaaaacacccaaaagttaaacacctcgtacaggcattcctatttaacacatattcaaaagcttgctctctaaatgtagcaaagaacgaaaactagcgcctgggagtgcgccatatatcccaagtgtttggcagtcgggtgtcattttgggtgccgagaagaccgcgtaggctggctcaacgtcaactgtttccgatcgatcGACGTCCTACTTGACACACAGTCAAAACCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTACCGCCTGGGAGTGCCCCAAAGAATCC--AGGTGTTTGCCAAGGGGGTGT--ATTTGT-GGGTGCCGTGAAGGCGCTCTAGCCTCGCCGGTTCGGCCCAAG
gi|6 : GTGCAGTGAAGGCGGAGCAG----GCTGG-----CCCAAGCGTCACCTGTATTTGA-TGACCCTGCCTAATCCA-AAAAGTAAAAAAAAACTGGTGCAGGCGTTC-TATTTGACACGCAGTCAAAAGCTTGCTCTCTAAATGTACGCT-A--G------ACCGACTA-CTTTCGCCTGGG-GTGAGCCCAAGAGCCCAAGTG-TTTGGCAAGGGGGTGTAATTT-TG-GTGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTATT-CGAT-GA---CC----CTGCCTAATCCCAAAAAGTCAAACAACTGGTGCAGGCGTTCTAGCAGTCA-AAAGTCAAAAGCTTaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacttctagatgaaccacgctcaaaaacttggtctccctgggcagtccagagggtgtagcagacacctgcgttgtccattgtaaccca
gi|7 : gCCGTGAATGTGCTCCAGCCTCGCTGGTTCGCACC--AACGCGCGAGAAAAAGGCTAGCCTTGCAAAA-CACACACCAGTTAAACAAGTCGTACAGGCGTTCTGTTTGACACATACTCAAAATCTTGCTCTCTAAATGTAGCCC-AGA-CACC-CTGTTAGCGCCTGGGAGTGCGCCAAAGAACCC--AGAACATTCGCAAGGGGGTGT--ATTTGT-GTGTGCCGTGAAGGCGTTCCAGCCTCGCTGGTTCGCCCCAAACG-CG
gi|8 : cgcaagtggctgtatttgtgtgtgCGACGGGT-GCCGTGAACGACACGAGAAACAGACTACCTTTGCAAAACA---AAATGTTAAACAA--CTAATACAGTCGTTC-TATGTGACACACAGTTAAAAGCTTGCTCTCTCAATGT--CCC-A--AAGT---GCA--CAAATTTGCGCATGGGAGTGCCCTAAAGAACCCAAGAACTTTGTCA--GGGGTGTATTTT-TGTGTGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGT-TT-T-AT--ATCACC----CTACCT
gi|9 : ggGCAAGTGAGTGTCGATTTGT-GTGTGCCGTGAAGGCGCTTGAGCCTCGCCGGTTCGACCAAAGTG-CGCTAGAAACAGGCTAGCCTTGCAAAACGTACAACATTCAAACAA--GTCGTGCAGGCGTCC-TACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-A--G-AC---ACC--CTA-CTAGCGACTGGGAGTGCACCAAAta
Alignments
lowQualScore : 2 22222222 1 11111111 11
lowQualScore : 1 8 0 6 1 1 1 1 2 2 2 0 777 22 2 5 1 44 8888 3 4 0 1 1 1 888 66 1 4 1 55 999 4 00000000 2 2 0 0 0 5 44 6 4 0 88888888 99 4 2 9999 1 0 1 0 8 1 55
lowQualScore : . . . . . . . . . . . . ... .. . . . .. .... . . . . . . ... .. . . . .. ... . ........ . . . . . . .. . . . ........ .. . . .... . . . . . . ..
lowQualScore : 4 0 8 7 1 1 1 0 9 9 9 2 111 55 8 0 1 44 3333 2 4 0 0 6 0 111 99 1 4 0 55 777 0 11111111 5 5 8 8 0 9 55 1 2 2 11111111 00 5 2 4444 1 1 0 6 0 4 00
consensus : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACAGTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAG--GAGCTTNGCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGCCCCAGCCTCGCCGGTTCGCCCCAAACG-CGCGAGNAACAGGCTANCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGCCCA-GAGCGC-CCTA-CTTGCGCCTGGGAGTGCNCCAAAGAACCCAAGAG-TTTGGCAAGNGGGTGTANTTTTGTGTGCGGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTACTNGACACACAGTTAAAAGCTTGCTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAAGT
Reference ( family-1034 ) : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACAGTCAAACAACTCGTGCAGGCGTCCTACTNGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAG--GAGCTTNGCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGCTCCAGCCTCGCCGGTTCGCCCCAAGCG-CGCGAGNAACAGGCTANCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACANTCAAAAGCTTG--CTCTCTAAATGTAGCCCA-GAGCGC-CCTA-CTTGCGCCTGGGAGTGCGCCAAAGAACCCAAGAG-TTTGGCAAGNGGGTGTAATTTTGTGTGCGGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTACTNGACACACAGTTAAAAGCTTGCTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAAGT
gi|1 : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAG
gi|1 : ATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCATGAAGGCGCTCAAGCCTCGTCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGACC-AGA-CAAC-TTACTAGCGCCTGGGTGTGCGCCAAAGAAGCCAG--GAGCTTGGCAAGGGAGTGTATTTGTG-TGGGCCGCGAAGGCGTCCCAGCCTCGACGGTTCGCCCCAAACG-CGCGAGTAACAGGCTATCCTTGAAAAACACACCAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGACCA-GAACGA-CTTC-TTTG-GCCTGGGAGTGCGCCATAGAACCAAATAG-TTTGGAAAGTGGGTGTTATTTTGGGTGCGGGTAAGACC--------GCGCAGGCTGGCTCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATACCAAAAAGTCAAACATGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCATGGGAGTG-GCCAAAGAACCCAAGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggccgcgaaggcgtcccagcctcgacggttcgccccaaacgcgcgagtaacaggctatccttgaaaaacacaccaaagttaaacaactcgtacgggcgttctatttgacacacactcaaaagcttgctctctaaatgtagaccagaacgacttctttggcctgggagtgcgccatagaaccaaatagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgcatgggagtggccaaagaacccaagt
gi|10 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtTTAAAAGCTTG--CTCTCTAAATAT--CCCA-AAGAGCACCTA-ATTGCGCCTTGGATTGCTCCAAAGAACCCAAGTA-TTTTGCCAGGGGGTGTATTTTTATGTGCAGTGAAGGTG--------GCGCAGGCTGACCCAAGCGTCACCTGTTT----TTGATCACC----CTGTCTAATCCCAAAAAGTCAGATAGGTCGTGCAGGCGTTCTACTTGACCCACA
gi|11 : CCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCGTACTAGACACACAGTTAAAAGCTTGACCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGTGCCAAA
gi|12 : gcaagtgagtgttgatcagtgtgtaCT----CTGCCTAATCCCAAAAAGTTAAACAACTTGTATAGGCATTCTATTTGACACACAGTTAAAAGCTTGCTCTCTAAATGTCCACAAGAGCA-CCTACTTGTGCCTGGGAGTGC-CCAAA
gi|13 : aAGCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGACCA-GAagtcagttgggatgtttgggaggag
gi|14 : GCCTAACCCCAAAAAGTCAAAGAACTGGTGCAAGCATTCTATTTGACACACAGTattttagaaaac
gi|15 : CTCTAAATGTAGCCT-AGA-CACC-TTACTAGCGTCTGGGAGTGCGCCAAc
gi|16 : CTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGTCTGGGAGTGCGCCAAccca
gi|17 : CTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGTCTGGGAGTGCGCCAAccca
gi|18 : CTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGTCTGGGAGTGCGCCAAccca
gi|2 : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGccca
gi|2 : ATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCATGAAGGCGCTCAAGCCTCGTCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGACC-AGA-CAAC-TTACTAGCGCCTGGGTGTGCGCCAAAGAAGCCAG--GAGCTTGGCAAGGGAGTGTATTTGTG-TGGGCCGCGAAGGCGTCCCAGCCTCGACGGTTCGCCCCAAACG-CGCGAGTAACAGGCTATCCTTGAAAAACACACCAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGACCA-GAACGA-CTTC-TTTG-GCCTGGGAGTGCGCCATAGAACCAAATAG-TTTGGAAAGTGGGTGTTATTTTGGGTGCGGGTAAGACC--------GCGCAGGCTGGCTCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATACCAAAAAGTCAAACATGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCATGGGAGTG-GCCAAAGAACCCAAGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggccgcgaaggcgtcccagcctcgacggttcgccccaaacgcgcgagtaacaggctatccttgaaaaacacaccaaagttaaacaactcgtacgggcgttctatttgacacacactcaaaagcttgctctctaaatgtagaccagaacgacttctttggcctgggagtgcgccatagaaccaaatagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgcatgggagtggccaaagaacccaagt
gi|3 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtACAAAAGTCAAACAACTCGTACAGGCGTTCTATTTGACACACAGTTAAA-GCTTGCTCTCTAAATGT-GCCC-AAG-AGCCACTACTTGCGACTGGGAGTGCCTCAAAGAATCCAA--TAATTTTGCCAGGAGGTGTATTTTTGGTGTGCAGTGAAGGCGGCGCAG----GCTGG-----CCCAAGCGTCGCCTGTTTTCGATTACCCT-GCCTTATCCCGAAAAGTCAAACAA--GTCGTGCTGGCGTTC-TACTAGACCCACAGTTAAAAGCTTG--CTCTCTAAATTT-GCCCAAGAGCAC-C-TA-CTTGCGCCTGAGAGTGCCCCAAAGAACCCAAGAA-TTTTGTCAGTGGGTGTATTTGTGTGTGCCGTGAAGGCGTACTGACAGGGCCGGTTCGCCCTAACGACACGAGAAACCGA-CTAT--CC----TTGCA-AAACAAAAAAAGTTAAACAACTGGTACAGGCGTTCTATTTGACACACATATAAAAGCTTGATCCCTAAATGTCCCCAAGA-GCCCCTTTTTGCACCTGGGAGTGCCCCAAAGAATCCAAG
gi|3 : AAAAGTCAAACAAGTCGTGCTGGCGTTCTACTAGACCCACAGTTAAAAGCTTGCTCTCTAAATTT-GCCCAAGAGCA-C-CTACTTGCGCCTGAGAGTGCCCCAAAGAACCCAA--GAATTTTGTCAGTGGGTGTATTTGTG-TGTGCCGTGAAGGCGTACTGACAGGGCCGGTTCGCCCTAA-CGACACGAGAAACCGACTATCCTTGCAAAACA-AAAAAAGTTAAACAA--CTGGTACAGGCGTTC-TATTTGACACACATATAAAAGCTTG--ATCCCTAAATGTCCCCAA-GAGC-C-CCTT-TTTGCACCTGGGAGTGCCCCAAAGAATCCAAGAATTTTGTCAAG-GTGTGTATTTTTGTATGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACTTGTTT----TCGATCACCAAAAATCCCTAATCTCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTaattttgtcaaggtgtgtatttttgtatgcagtgaaggcggcgcaggctggcccaagcgtcacttgttttcgatcaccaaaaatccctaatctcaaaaagtcaaacaagtcgtgcaggcgttct
gi|4 : acaaaagtcaaacaactcgtacaggcgttctatttgacacacagttaaagcttgctctctaaatgtgcccaagagccactacttgcgactgggagtgcctcaaagaatccaataattttgccaggaggtgtatttttggtgtgcagtgaaggcggcgcaggctggcccaagcgtcgcctgttttcgattaccctgccttatcccgCAACAGTTAAACAACTCGTACAGGCGTGTTGTTTGACACACACTCAAAAGTTTGCCCTCTAAATGTAGCCC-AGA-CACT-CTACTAGCGCCTGGGAGTGCGCCATAGAACCCAA--CACAATCGCAAGGTGGTTTATTTGTG-TCCGC-GTGAAGACACTCCAGCCTTGCCGGTTCGCACCAAACG-GGCGAGAAACAAGCTAGCCTTGCAAAACACCCAAAAGTTAAACAC--CTCGTACAGGCATTCCTATTTAACACATATTCAAAAGCTTG--CTCTCTAAATGTAGCAAA-GAACGA-AA-A-CTAGCGCCTGGGAGTGCGCCATATATCCCAAGTG-TTTGGCAGTCGGGTGTCATTTTGGGTGCCGAGAAGACC--------GCGTAGGCTGGCTCAA-CGTCAACTGTTTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCATCCTACTAGACACACAGTTAAAGGCTTGGTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGTCAAAGAACCC
gi|4 : GCCCTGCCTAATCCCAAAA-AGTCAAACAAGTCGTGCAGGCATCCTACTAGACACACAGTTAAAGGCTTGGTCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGCGTCAAAGAACCCGGAAAAGCT--GCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGCTCCA-----ACCGGTCCGCCCggaaaagctgcaagggggtgtatttgtgtgtgccgtgaaggcgctccaaccggtccgccc
gi|5 : caacagttaaacaactcgtacaggcgtgttgtttgacacacactcaaaagtttgccctctaaatgtagcccagacactctactagcgcctgggagtgcgccatagaacccaacacaatcgcaaggtggtttatttgtgtccgcgtgaagacactccagccttgccggttcgcaccaaacgggcgagaaacaagctagccttgcaaaacacccaaaagttaaacacctcgtacaggcattcctatttaacacatattcaaaagcttgctctctaaatgtagcaaagaacgaaaactagcgcctgggagtgcgccatatatcccaagtgtttggcagtcgggtgtcattttgggtgccgagaagaccgcgtaggctggctcaacgtcaactgtttccgatcgatcGACGTCCTACTTGACACACAGTCAAAACCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTACCGCCTGGGAGTGCCCCAAAGAATCCAG--GTGTTTGCCAAGGGGGTGTATTTGTG-GGTGCCGTGAAGGCGCTCTAGCCTCGCCGGTTCGGCCCAAG
gi|5 : TTC-TAGATGAACCACGCTCAAAAACTTGGTCTCCCTGG--GCAGTCCA-GAGaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacttctagatgaaccacgctcaaaaacttggtctccctgggcagtccagagggtgtagcagacacctgcgttgtccattgtaaccca
gi|6 : gacgtcctacttgacacacagtcaaaaccttgccctctaaatgtagcccagacaccctactaccgcctgggagtgccccaaagaatccaggtgtttgccaagggggtgtatttgtgggtgccgtgaaggcgctctagcctcgccggttcggcccaagaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacGTGCAGTGAAGGCGGAGCAG----GCTGG-----CCCAAGCGTCACCTGTATTTGA-TGACCCTGCCTAATCCA-AAAAGTAAAAAAAAACTGGTGCAGGCGTTC-TATTTGACACGCAGTCAAAAGCTTG--CTCTCTAAATGTACGCTA-GACCG--ACTA-CTTTCGCCTGGG-GTGAGCCCAAGAGCCCAAGTG-TTTGGCAAGGGGGTGTAATTTTG-GTGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTATTCGAT-GA---CC----CTGCCTAATCCCAAAAAGTCAAACAACTGGTGCAGGCGTTCTAGCAGTCA-AAAGTCAAAAGCTTggtgtagcagacacctgcgttgtccattgtaaccca
gi|7 : gCCGTGAATGTGCTCCAGCCTCGCTGGTTCGCACCAA--CGCGCGAGAAAAAGGCTAGCCTTGCAAAA-CACACACCAGTTAAACAAGTCGTACAGGCGTTCTGTTTGACACATACTCAAAATCTTGCTCTCTAAATGTAGCCC-AGA-CACC-CTGTTAGCGCCTGGGAGTGCGCCAAAGAACCCAG--AACATTCGCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGTTCCAGCCTCGCTGGTTCGCCCCAAACG-CG
gi|8 : cgcaagtggctgtatttgtgtgtgCGACGGGT-GCCGTGAACGACACGAGAAACAGACTACCTTTGCAAAACA---AAATGTTAAACAA--CTAATACAGTCGTTC-TATGTGACACACAGTTAAAAGCTTG--CTCTCTCAATGT--CCCA-AAGTGC-ACAAATTTGCGCATGGGAGTGCCCTAAAGAACCCAAGAACTTTGTCA--GGGGTGTATTTTTGTGTGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTTTT--AT--ATCACC----CTACCT
gi|9 : ggCCGTGAAGGCGCTTGAGCCTCGCCGGTTCG-ACCAAAGTGCGCTAGAAACAGGCTAGCCTTGCAAAA-CGTACAACATTCAAACAAGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGACTGGGAGTGCACCAAAta
Alignments
lowQualScore : 2 22222222 1 11111111 11
lowQualScore : 1 8 0 6 1 1 1 1 2 2 2 0 777 22 2 5 1 55 8888 3 0 1 1 1 888 66 1 4 1 55 999 4 00000000 2 1 0 0 0 5 11 6 4 0 88888888 99 4 2 9999 1 0 1 0 8 1 55
lowQualScore : . . . . . . . . . . . . ... .. . . . .. .... . . . . . ... .. . . . .. ... . ........ . . . . . . .. . . . ........ .. . . .... . . . . . . ..
lowQualScore : 4 0 8 7 1 1 1 4 9 9 9 2 111 55 8 0 1 33 3333 2 0 0 6 0 111 99 1 4 9 55 777 0 11111111 5 0 8 8 0 9 55 1 2 2 11111111 00 5 2 4444 1 1 0 6 0 4 00
consensus : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACAGTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAG--GAGCTTNGCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGCCCCAGCCTCGCCGGTTCGCCCCAAACG-CGCGAGNAACAGGCTANCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGCCCA-GAGCGC-CCTA-CTTGCGCCTGGGAGTGCNCCAAAGAACCCAAGAG-TTTGGCAAGNGGGTGTANTTTTGTGTGCGGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTACTNGACACACAGTTAAAAGCTTGCTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAAGT
Reference ( family-1034 ) : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACAGTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAG--GAGCTTNGCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGCCCCAGCCTCGCCGGTTCGCCCCAAACG-CGCGAGNAACAGGCTANCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGCCCA-GAGCGC-CCTA-CTTGCGCCTGGGAGTGCNCCAAAGAACCCAAGAG-TTTGGCAAGNGGGTGTANTTTTGTGTGCGGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTACTNGACACACAGTTAAAAGCTTGCTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAAGT
gi|1 : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAG
gi|1 : ATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCATGAAGGCGCTCAAGCCTCGTCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGACC-AGA-CAAC-TTACTAGCGCCTGGGTGTGCGCCAAAGAAGCCAG--GAGCTTGGCAAGGGAGTGTATTTGTG-TGGGCCGCGAAGGCGTCCCAGCCTCGACGGTTCGCCCCAAACG-CGCGAGTAACAGGCTATCCTTGAAAAACACACCAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGACCA-GAACGA-CTTC-TTTG-GCCTGGGAGTGCGCCATAGAACCAAATAG-TTTGGAAAGTGGGTGTTATTTTGGGTGCGGGTAAGACC--------GCGCAGGCTGGCTCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATACCAAAAAGTCAAACATGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCATGGGAGTG-GCCAAAGAACCCAAGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggccgcgaaggcgtcccagcctcgacggttcgccccaaacgcgcgagtaacaggctatccttgaaaaacacaccaaagttaaacaactcgtacgggcgttctatttgacacacactcaaaagcttgctctctaaatgtagaccagaacgacttctttggcctgggagtgcgccatagaaccaaatagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgcatgggagtggccaaagaacccaagt
gi|10 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtTTAAAAGCTTG--CTCTCTAAATAT--CCCA-AAGAGCACCTA-ATTGCGCCTTGGATTGCTCCAAAGAACCCAAGTA-TTTTGCCAGGGGGTGTATTTTTATGTGCAGTGAAGGTG--------GCGCAGGCTGACCCAAGCGTCACCTGTTT----TTGATCACC----CTGTCTAATCCCAAAAAGTCAGATAGGTCGTGCAGGCGTTCTACTTGACCCACA
gi|11 : CCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCGTACTAGACACACAGTTAAAAGCTTGACCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGTGCCAAA
gi|12 : gcaagtgagtgttgatcagtgtgtaCT----CTGCCTAATCCCAAAAAGTTAAACAACTTGTATAGGCATTCTATTTGACACACAGTTAAAAGCTTGCTCTCTAAATGTCCACAAGAGCA-CCTACTTGTGCCTGGGAGTGC-CCAAA
gi|13 : aAGCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGACCA-GAagtcagttgggatgtttgggaggag
gi|14 : GCCTAACCCCAAAAAGTCAAAGAACTGGTGCAAGCATTCTATTTGACACACAGTattttagaaaac
gi|15 : CTCTAAATGTAGCCT-AGA-CACC-TTACTAGCGTCTGGGAGTGCGCCAAc
gi|16 : CTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGTCTGGGAGTGCGCCAAccca
gi|17 : CTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGTCTGGGAGTGCGCCAAccca
gi|18 : CTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGTCTGGGAGTGCGCCAAccca
gi|2 : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGccca
gi|2 : ATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCATGAAGGCGCTCAAGCCTCGTCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGACC-AGA-CAAC-TTACTAGCGCCTGGGTGTGCGCCAAAGAAGCCAG--GAGCTTGGCAAGGGAGTGTATTTGTG-TGGGCCGCGAAGGCGTCCCAGCCTCGACGGTTCGCCCCAAACG-CGCGAGTAACAGGCTATCCTTGAAAAACACACCAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGACCA-GAACGA-CTTC-TTTG-GCCTGGGAGTGCGCCATAGAACCAAATAG-TTTGGAAAGTGGGTGTTATTTTGGGTGCGGGTAAGACC--------GCGCAGGCTGGCTCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATACCAAAAAGTCAAACATGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCATGGGAGTG-GCCAAAGAACCCAAGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggccgcgaaggcgtcccagcctcgacggttcgccccaaacgcgcgagtaacaggctatccttgaaaaacacaccaaagttaaacaactcgtacgggcgttctatttgacacacactcaaaagcttgctctctaaatgtagaccagaacgacttctttggcctgggagtgcgccatagaaccaaatagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgcatgggagtggccaaagaacccaagt
gi|3 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtACAAAAGTCAAACAACTCGTACAGGCGTTCTATTTGACACACAGTTAAA-GCTTGCTCTCTAAATGT-GCCC-AAG-AGCCACTACTTGCGACTGGGAGTGCCTCAAAGAATCCAA--TAATTTTGCCAGGAGGTGTATTTTTGGTGTGCAGTGAAGGCGGCGCAG----GCTGG-----CCCAAGCGTCGCCTGTTTTCGATTACCCT-GCCTTATCCCGAAAAGTCAAACAA--GTCGTGCTGGCGTTC-TACTAGACCCACAGTTAAAAGCTTG--CTCTCTAAATTT-GCCCAAGAGCAC-C-TA-CTTGCGCCTGAGAGTGCCCCAAAGAACCCAAGAA-TTTTGTCAGTGGGTGTATTTGTGTGTGCCGTGAAGGCGTACTGACAGGGCCGGTTCGCCCTAACGACACGAGAAACCGA-CTAT--CC----TTGCA-AAACAAAAAAAGTTAAACAACTGGTACAGGCGTTCTATTTGACACACATATAAAAGCTTGATCCCTAAATGTCCCCAAGA-GCCCCTTTTTGCACCTGGGAGTGCCCCAAAGAATCCAAG
gi|3 : AAAAGTCAAACAAGTCGTGCTGGCGTTCTACTAGACCCACAGTTAAAAGCTTGCTCTCTAAATTT-GCCCAAGAGCA-C-CTACTTGCGCCTGAGAGTGCCCCAAAGAACCCAA--GAATTTTGTCAGTGGGTGTATTTGTG-TGTGCCGTGAAGGCGTACTGACAGGGCCGGTTCGCCCT-AACGACACGAGAAACCGACTATCCTTGCAAAACA-AAAAAAGTTAAACAA--CTGGTACAGGCGTTC-TATTTGACACACATATAAAAGCTTG--ATCCCTAAATGTCCCCAA-GAGC-C-CCTT-TTTGCACCTGGGAGTGCCCCAAAGAATCCAAGAATTTTGTCAAG-GTGTGTATTTTTGTATGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACTTGTTT----TCGATCACCAAAAATCCCTAATCTCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTaattttgtcaaggtgtgtatttttgtatgcagtgaaggcggcgcaggctggcccaagcgtcacttgttttcgatcaccaaaaatccctaatctcaaaaagtcaaacaagtcgtgcaggcgttct
gi|4 : acaaaagtcaaacaactcgtacaggcgttctatttgacacacagttaaagcttgctctctaaatgtgcccaagagccactacttgcgactgggagtgcctcaaagaatccaataattttgccaggaggtgtatttttggtgtgcagtgaaggcggcgcaggctggcccaagcgtcgcctgttttcgattaccctgccttatcccgCAACAGTTAAACAACTCGTACAGGCGTGTTGTTTGACACACACTCAAAAGTTTGCCCTCTAAATGTAGCCC-AGA-CACT-CTACTAGCGCCTGGGAGTGCGCCATAGAACCCAA--CACAATCGCAAGGTGGTTTATTTGTG-TCCGC-GTGAAGACACTCCAGCCTTGCCGGTTCGCACCAAACG-GGCGAGAAACAAGCTAGCCTTGCAAAACACCCAAAAGTTAAACAC--CTCGTACAGGCATTCCTATTTAACACATATTCAAAAGCTTG--CTCTCTAAATGTAGCAAA-GAACGA-AA-A-CTAGCGCCTGGGAGTGCGCCATATATCCCAAGTG-TTTGGCAGTCGGGTGTCATTTTGGGTGCCGAGAAGACC--------GCGTAGGCTGGCTCAA-CGTCAACTGTTTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCATCCTACTAGACACACAGTTAAAGGCTTGGTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGTCAAAGAACCC
gi|4 : GCCCTGCCTAATCCCAAAA-AGTCAAACAAGTCGTGCAGGCATCCTACTAGACACACAGTTAAAGGCTTGGTCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGCGTCAAAGAACCCGGAAAAGCT--GCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGCTCCA-----ACCGGTCCGCCCggaaaagctgcaagggggtgtatttgtgtgtgccgtgaaggcgctccaaccggtccgccc
gi|5 : caacagttaaacaactcgtacaggcgtgttgtttgacacacactcaaaagtttgccctctaaatgtagcccagacactctactagcgcctgggagtgcgccatagaacccaacacaatcgcaaggtggtttatttgtgtccgcgtgaagacactccagccttgccggttcgcaccaaacgggcgagaaacaagctagccttgcaaaacacccaaaagttaaacacctcgtacaggcattcctatttaacacatattcaaaagcttgctctctaaatgtagcaaagaacgaaaactagcgcctgggagtgcgccatatatcccaagtgtttggcagtcgggtgtcattttgggtgccgagaagaccgcgtaggctggctcaacgtcaactgtttccgatcgatcGACGTCCTACTTGACACACAGTCAAAACCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTACCGCCTGGGAGTGCCCCAAAGAATCCAG--GTGTTTGCCAAGGGGGTGTATTTGTG-GGTGCCGTGAAGGCGCTCTAGCCTCGCCGGTTCGGCCCAA
gi|5 : TTC-TAGATGAACCACGCTCAAAAACTTGGTCTCCCTGG--GCAGTCCA-GAGgaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacttctagatgaaccacgctcaaaaacttggtctccctgggcagtccagagggtgtagcagacacctgcgttgtccattgtaaccca
gi|6 : gacgtcctacttgacacacagtcaaaaccttgccctctaaatgtagcccagacaccctactaccgcctgggagtgccccaaagaatccaggtgtttgccaagggggtgtatttgtgggtgccgtgaaggcgctctagcctcgccggttcggcccaagaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacGTGCAGTGAAGGCGGAGCAG----GCTGG-----CCCAAGCGTCACCTGTATTTGA-TGACCCTGCCTAATCCA-AAAAGTAAAAAAAAACTGGTGCAGGCGTTC-TATTTGACACGCAGTCAAAAGCTTG--CTCTCTAAATGTACGCTA-GACCG--ACTA-CTTTCGCCTGGG-GTGAGCCCAAGAGCCCAAGTG-TTTGGCAAGGGGGTGTAATTTTG-GTGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTATTCGAT-GA---CC----CTGCCTAATCCCAAAAAGTCAAACAACTGGTGCAGGCGTTCTAGCAGTCA-AAAGTCAAAAGCTTggtgtagcagacacctgcgttgtccattgtaaccca
gi|7 : gCCGTGAATGTGCTCCAGCCTCGCTGGTTCGCACCAA--CGCGCGAGAAAAAGGCTAGCCTTGCAAAA-CACACACCAGTTAAACAAGTCGTACAGGCGTTCTGTTTGACACATACTCAAAATCTTGCTCTCTAAATGTAGCCC-AGA-CACC-CTGTTAGCGCCTGGGAGTGCGCCAAAGAACCCAG--AACATTCGCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGTTCCAGCCTCGCTGGTTCGCCCCAAACG-CG
gi|8 : cgcaagtggctgtatttgtgtgtgCGACGGGT-GCCGTGAACGACACGAGAAACAGACTACCTTTGCAAAACA---AAATGTTAAACAA--CTAATACAGTCGTTC-TATGTGACACACAGTTAAAAGCTTG--CTCTCTCAATGT--CCCA-AAGTGC-ACAAATTTGCGCATGGGAGTGCCCTAAAGAACCCAAGAACTTTGTCA--GGGGTGTATTTTTGTGTGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTTTT--AT--ATCACC----CTACCT
gi|9 : ggCCGTGAAGGCGCTTGAGCCTCGCCGGTTCG-ACCAAAGTGCGCTAGAAACAGGCTAGCCTTGCAAAA-CGTACAACATTCAAACAAGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGACTGGGAGTGCACCAAAta
blockSeqs : G C T C T C A A G A AAA GC G G C TC CCTC T T T A G CAC AA G C C GT AGA A CACCTAA C T T G AT T A TACTGACA CC T A AAAA G T G T CC
blockSeqs : A . . C T C A . . . G AT T . A GC CAGG T A T C T CAC . G . C . AGA . CACAAAT C G C T TA G G . CC C G . C T . A CG
blockSeqs : C . . A G C T . . . T AT T . C TA CCTT T T A C C CCG . T . G . CCC . ACTTCT C C . T AT T C . CC C A . C T . T C
blockSeqs : G . . A G G A . . . G CA C . C CT CCTC T A A A T CCC . A . T . AGC . CCCTTT C C . C AT T A . TC C G . G A . A G
blockSeqs : . C G C T . . . C GC G . C CT CCTC T . T T G AA . A . T . AGT . CCTAC C G . G CA G C . T C A . C T
blockSeqs : C G G A . . . G GT C . A CT . T . A A A CA . A . C . ACG . AAAAC C G . G AA T A . . . . . G A
blockSeqs : C G G T . . . A CA . . C GA . G . C . . A . G . GC . ACTAC . C . . AT . A . . . . . G A
blockSeqs : . T G T . . . . TT . . . G . C . . C
blockSeqs : A . . . . . C .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqCons : NCTAC***
originalCons : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACAGTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAG--GAGCTTNGCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGCCCCAGCCTCGCCGGTTCGCCCCAAACG-CGCGAGNAACAGGCTANCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGCCCA-GAGCGC-CCTA-CTTGCGCCTGGGAGTGCNCCAAAGAACCCAAGAG-TTTGGCAAGNGGGTGTANTTTTGTGTGCGGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTACTNGACACACAGTTAAAAGCTTGCTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAAGT
finalCons : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACAGTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCC-AGA-CACC-CTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAG--GAGCTTNGCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGCCCCAGCCTCGCCGGTTCGCCCCAAACG-CGCGAGNAACAGGCTANCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGCCCA-GAGCGNCTAC---TTGCGCCTGGGAGTGCNCCAAAGAACCCAAGAG-TTTGGCAAGNGGGTGTANTTTTGTGTGCGGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTACTNGACACACAGTTAAAAGCTTGCTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAAGT
Alignments
lowQualScore : 2 1 11111111 11
lowQualScore : 1 8 0 6 1 1 1 1 2 2 2 0 777 22 2 5 1 55 8888 3 0 0 1 1 1 8 66 1 4 1 55 999 99 1 777 1 0 0 0 5 11 6 4 0 88888888 99 4 2 9999 1 0 1 0 8 1 55
lowQualScore : . . . . . . . . . . . . ... .. . . . .. .... . . . . . . . .. . . . .. ... .. . ... . . . . . .. . . . ........ .. . . .... . . . . . . ..
lowQualScore : 4 0 8 7 1 1 1 4 9 9 9 2 111 55 8 0 1 33 3333 2 9 0 0 6 0 8 99 1 4 9 55 777 55 0 666 0 8 8 0 9 55 1 2 2 11111111 00 5 2 4444 1 1 0 6 0 4 00
consensus : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACAGTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCCA-GA-CACC-CTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAG--GAGCTTNGCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGCCCCAGCCTCGCCGGTTCGCCCCAAACG-CGCGAGNAACAGGCTANCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGCCC--AGAGCGNCT--ACTTGCGCCTGGGAGTGCNCCAAAGAACCCAAGAG-TTTGGCAAGNGGGTGTANTTTTGTGTGCGGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTACTNGACACACAGTTAAAAGCTTGCTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAAGT
Reference ( family-1034 ) : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACAGTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCCA-GA-CACC-CTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAG--GAGCTTNGCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGCCCCAGCCTCGCCGGTTCGCCCCAAACG-CGCGAGNAACAGGCTANCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGCCC--AGAGCGNCT--ACTTGCGCCTGGGAGTGCNCCAAAGAACCCAAGAG-TTTGGCAAGNGGGTGTANTTTTGTGTGCGGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTACTNGACACACAGTTAAAAGCTTGCTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGCCAAAGAACCCAAGT
gi|1 : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAG
gi|1 : ATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCATGAAGGCGCTCAAGCCTCGTCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGACCA-GA-CAAC-TTACTAGCGCCTGGGTGTGCGCCAAAGAAGCCAG--GAGCTTGGCAAGGGAGTGTATTTGTG-TGGGCCGCGAAGGCGTCCCAGCCTCGACGGTTCGCCCCAAACG-CGCGAGTAACAGGCTATCCTTGAAAAACACACCAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGACC--AGAACGACT--TCTTTGGCCTGGGAGTGCGCCATAGAACCAAATAG-TTTGGAAAGTGGGTGTTATTTTGGGTGCGGGTAAGACC--------GCGCAGGCTGGCTCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATACCAAAAAGTCAAACATGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCATGGGAGTG-GCCAAAGAACCCAAGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggccgcgaaggcgtcccagcctcgacggttcgccccaaacgcgcgagtaacaggctatccttgaaaaacacaccaaagttaaacaactcgtacgggcgttctatttgacacacactcaaaagcttgctctctaaatgtagaccagaacgacttctttggcctgggagtgcgccatagaaccaaatagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgcatgggagtggccaaagaacccaagt
gi|10 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtTTAAAAGCTTG--CTCTCTAAATAT--CCCAAAGAGCACCT--AATTGCGCCTTGGATTGCTCCAAAGAACCCAAGTA-TTTTGCCAGGGGGTGTATTTTTATGTGCAGTGAAGGTG--------GCGCAGGCTGACCCAAGCGTCACCTGTTT----TTGATCACC----CTGTCTAATCCCAAAAAGTCAGATAGGTCGTGCAGGCGTTCTACTTGACCCACA
gi|11 : CCGTGAAGGCGCTCGAGCCTCGCCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCGTACTAGACACACAGTTAAAAGCTTGACCTCTAAATGTAGCCCA-GA-CACC-CTACTAGCGCCTGGGAGTGTGCCAAA
gi|12 : gcaagtgagtgttgatcagtgtgtaCT----CTGCCTAATCCCAAAAAGTTAAACAACTTGTATAGGCATTCTATTTGACACACAGTTAAAAGCTTGCTCTCTAAATGTCCACAAGAGCA-CCTACTTGTGCCTGGGAGTGC-CCAAA
gi|13 : aAGCCTTGCAAAACACACAAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGACC--AGAagtcagttgggatgtttgggaggag
gi|14 : GCCTAACCCCAAAAAGTCAAAGAACTGGTGCAAGCATTCTATTTGACACACAGTattttagaaaac
gi|15 : CTCTAAATGTAGCCTA-GA-CACC-TTACTAGCGTCTGGGAGTGCGCCAAc
gi|16 : CTCTAAATGTAGCCCA-GA-CACC-CTACTAGCGTCTGGGAGTGCGCCAAccca
gi|17 : CTCTAAATGTAGCCCA-GA-CACC-CTACTAGCGTCTGGGAGTGCGCCAAccca
gi|18 : CTCTAAATGTAGCCCA-GA-CACC-CTACTAGCGTCTGGGAGTGCGCCAAccca
gi|2 : AACTAATGTACACTGTACTAGAGTAAGTCACGTATTTAAAGTTACAAAAATCCTTTAAAAACCATAAAGGTTATTTATACAAGTTTAGATAATTTTAAACATAGTAGccca
gi|2 : ATGACGCTAGAAACAGGCTAGGTGTCCTACTAGACACACAGTTAAAAGCTTGCCCTTTAAATGTAGCCCAGACACCCATGAAGGCGCTCAAGCCTCGTCGGTTCG-ACCAAAATGCGCTAGAAACAGGCTAGCCTTGCAAAA-CACACAACATTCAAACAACTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGACCA-GA-CAAC-TTACTAGCGCCTGGGTGTGCGCCAAAGAAGCCAG--GAGCTTGGCAAGGGAGTGTATTTGTG-TGGGCCGCGAAGGCGTCCCAGCCTCGACGGTTCGCCCCAAACG-CGCGAGTAACAGGCTATCCTTGAAAAACACACCAAAGTTAAACAA--CTCGTACGGGCGTTC-TATTTGACACACACTCAAAAGCTTG--CTCTCTAAATGTAGACC--AGAACGACT--TCTTTGGCCTGGGAGTGCGCCATAGAACCAAATAG-TTTGGAAAGTGGGTGTTATTTTGGGTGCGGGTAAGACC--------GCGCAGGCTGGCTCAAGCGTCACCTGTTTCCGATCGATCGCC----CTGCCTAATACCAAAAAGTCAAACATGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCATGGGAGTG-GCCAAAGAACCCAAGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtatgacgctagaaacaggctaggtgtcctactagacacacagttaaaagcttgccctttaaatgtagcccagacacccatgaaggcgctcaagcctcgtcggttcgaccaaaatgcgctagaaacaggctagccttgcaaaacacacaacattcaaacaactcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagaccagacaacttactagcgcctgggtgtgcgccaaagaagccaggagcttggcaagggagtgtatttgtgtgggccgcgaaggcgtcccagcctcgacggttcgccccaaacgcgcgagtaacaggctatccttgaaaaacacaccaaagttaaacaactcgtacgggcgttctatttgacacacactcaaaagcttgctctctaaatgtagaccagaacgacttctttggcctgggagtgcgccatagaaccaaatagtttggaaagtgggtgttattttgggtgcgggtaagaccgcgcaggctggctcaagcgtcacctgtttccgatcgatcgccctgcctaataccaaaaagtcaaacatgtcgtgcaggcgtcctactagacacacagttaaaagcttgccctctaaatgtagcccagacaccctactagcgcatgggagtggccaaagaacccaagt
gi|3 : aactaatgtacactgtactagagtaagtcacgtatttaaagttacaaaaatcctttaaaaaccataaaggttatttatacaagtttagataattttaaacatagtagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttagtcaatgacaatactaaataattaacaagagtattgggtgtccgttttacatttaattgacaaattctaaagaacagatgagatgctgtcccgttctataaattcttataccattcgaaatagaatcgacctacaatgttggtttttattcctatgcatatgacatttgacctcagtgaactcgatgtttcagtgacctccaaagatacagtgaccatcctgtgttaaacttatatttttatctggcaacagcggtcttagtttttaagttatatattcccaaagctacagtaatcgtccattgacatgcttagcactattcctttctgatgttgtACAAAAGTCAAACAACTCGTACAGGCGTTCTATTTGACACACAGTTAAA-GCTTGCTCTCTAAATGT-GCCCA-AG-AGCCACTACTTGCGACTGGGAGTGCCTCAAAGAATCCAA--TAATTTTGCCAGGAGGTGTATTTTTGGTGTGCAGTGAAGGCGGCGCAG----GCTGG-----CCCAAGCGTCGCCTGTTTTCGATTACCCT-GCCTTATCCCGAAAAGTCAAACAA--GTCGTGCTGGCGTTC-TACTAGACCCACAGTTAAAAGCTTG--CTCTCTAAATTT-GCCCA-AGAGCACCT--ACTTGCGCCTGAGAGTGCCCCAAAGAACCCAAGAA-TTTTGTCAGTGGGTGTATTTGTGTGTGCCGTGAAGGCGTACTGACAGGGCCGGTTCGCCCTAACGACACGAGAAACCGA-CTAT--CC----TTGCA-AAACAAAAAAAGTTAAACAACTGGTACAGGCGTTCTATTTGACACACATATAAAAGCTTGATCCCTAAATGTCCCCAAGA-GCCCCTTTTTGCACCTGGGAGTGCCCCAAAGAATCCAAG
gi|3 : AAAAGTCAAACAAGTCGTGCTGGCGTTCTACTAGACCCACAGTTAAAAGCTTGCTCTCTAAATTT-GCCCAAGAGCACC--TACTTGCGCCTGAGAGTGCCCCAAAGAACCCAA--GAATTTTGTCAGTGGGTGTATTTGTG-TGTGCCGTGAAGGCGTACTGACAGGGCCGGTTCGCCCTAA-CGACACGAGAAACCGACTATCCTTGCAAAACAAA-AAAAGTTAAACAA--CTGGTACAGGCGTTC-TATTTGACACACATATAAAAGCTTG--ATCCCTAAATGTCCCCA--AGAGCCCCT--TTTTGCACCTGGGAGTGCCCCAAAGAATCCAAGAATTTTGTCAAG-GTGTGTATTTTTGTATGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACTTGTTT----TCGATCACCAAAAATCCCTAATCTCAAAAAGTCAAACAAGTCGTGCAGGCGTTCTaattttgtcaaggtgtgtatttttgtatgcagtgaaggcggcgcaggctggcccaagcgtcacttgttttcgatcaccaaaaatccctaatctcaaaaagtcaaacaagtcgtgcaggcgttct
gi|4 : acaaaagtcaaacaactcgtacaggcgttctatttgacacacagttaaagcttgctctctaaatgtgcccaagagccactacttgcgactgggagtgcctcaaagaatccaataattttgccaggaggtgtatttttggtgtgcagtgaaggcggcgcaggctggcccaagcgtcgcctgttttcgattaccctgccttatcccgCAACAGTTAAACAACTCGTACAGGCGTGTTGTTTGACACACACTCAAAAGTTTGCCCTCTAAATGTAGCCCA-GA-CACT-CTACTAGCGCCTGGGAGTGCGCCATAGAACCCAA--CACAATCGCAAGGTGGTTTATTTGTG-TCCGC-GTGAAGACACTCCAGCCTTGCCGGTTCGCACCAAACG-GGCGAGAAACAAGCTAGCCTTGCAAAACACCCAAAAGTTAAACAC--CTCGTACAGGCATTCCTATTTAACACATATTCAAAAGCTTG--CTCTCTAAATGTAGCAA--AGAACGAAA--ACTAGCGCCTGGGAGTGCGCCATATATCCCAAGTG-TTTGGCAGTCGGGTGTCATTTTGGGTGCCGAGAAGACC--------GCGTAGGCTGGCTCAA-CGTCAACTGTTTCCGATCGATCGCC----CTGCCTAATCCCAAAAAGTCAAACAAGTCGTGCAGGCATCCTACTAGACACACAGTTAAAGGCTTGGTCTCTAAATGTAGCCCAGA-CACCCTACTAGCGCCTGGGAGTGCGTCAAAGAACCC
gi|4 : GCCCTGCCTAATCCCAAAA-AGTCAAACAAGTCGTGCAGGCATCCTACTAGACACACAGTTAAAGGCTTGGTCTCTAAATGTAGCCCA-GA-CACC-CTACTAGCGCCTGGGAGTGCGTCAAAGAACCCGGAAAAGCT--GCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGCTCCA-----ACCGGTCCGCCCggaaaagctgcaagggggtgtatttgtgtgtgccgtgaaggcgctccaaccggtccgccc
gi|5 : caacagttaaacaactcgtacaggcgtgttgtttgacacacactcaaaagtttgccctctaaatgtagcccagacactctactagcgcctgggagtgcgccatagaacccaacacaatcgcaaggtggtttatttgtgtccgcgtgaagacactccagccttgccggttcgcaccaaacgggcgagaaacaagctagccttgcaaaacacccaaaagttaaacacctcgtacaggcattcctatttaacacatattcaaaagcttgctctctaaatgtagcaaagaacgaaaactagcgcctgggagtgcgccatatatcccaagtgtttggcagtcgggtgtcattttgggtgccgagaagaccgcgtaggctggctcaacgtcaactgtttccgatcgatcGACGTCCTACTTGACACACAGTCAAAACCTTGCCCTCTAAATGTAGCCCA-GA-CACC-CTACTACCGCCTGGGAGTGCCCCAAAGAATCCAG--GTGTTTGCCAAGGGGGTGTATTTGTG-GGTGCCGTGAAGGCGCTCTAGCCTCGCCGGTTCGGCCCAA
gi|5 : TTC-TAGATGAACCACGCTCAAAAACTTGGTCTCCCTGG--GCAGTCC--AGAGgaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacttctagatgaaccacgctcaaaaacttggtctccctgggcagtccagagggtgtagcagacacctgcgttgtccattgtaaccca
gi|6 : gacgtcctacttgacacacagtcaaaaccttgccctctaaatgtagcccagacaccctactaccgcctgggagtgccccaaagaatccaggtgtttgccaagggggtgtatttgtgggtgccgtgaaggcgctctagcctcgccggttcggcccaagaagcctacacactgcagtctggtgcaggtaggccagaggatgtagcagacacctgcgttgtccattggaaccctgttgttttgcaacggcggaaattggcgccggggcgagatgccgtattttcgcctttagtcggcccaaacagcctacagactgcagtctggtgtgtgtgcccatgttacctagcctcgatgaccgacGTGCAGTGAAGGCGGAGCAG----GCTGG-----CCCAAGCGTCACCTGTATTTGA-TGACCCTGCCTAATCCA-AAAAGTAAAAAAAAACTGGTGCAGGCGTTC-TATTTGACACGCAGTCAAAAGCTTG--CTCTCTAAATGTACGCT--AGACCGACT--ACTTTCGCCTGGG-GTGAGCCCAAGAGCCCAAGTG-TTTGGCAAGGGGGTGTAATTTTG-GTGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTATTCGAT-GA---CC----CTGCCTAATCCCAAAAAGTCAAACAACTGGTGCAGGCGTTCTAGCAGTCA-AAAGTCAAAAGCTTggtgtagcagacacctgcgttgtccattgtaaccca
gi|7 : gCCGTGAATGTGCTCCAGCCTCGCTGGTTCGCACCAA--CGCGCGAGAAAAAGGCTAGCCTTGCAAAA-CACACACCAGTTAAACAAGTCGTACAGGCGTTCTGTTTGACACATACTCAAAATCTTGCTCTCTAAATGTAGCCCA-GA-CACC-CTGTTAGCGCCTGGGAGTGCGCCAAAGAACCCAG--AACATTCGCAAGGGGGTGTATTTGTG-TGTGCCGTGAAGGCGTTCCAGCCTCGCTGGTTCGCCCCAAACG-CG
gi|8 : cgcaagtggctgtatttgtgtgtgCGACGGGT-GCCGTGAACGACACGAGAAACAGACTACCTTTGCAAAACA---AAATGTTAAACAA--CTAATACAGTCGTTC-TATGTGACACACAGTTAAAAGCTTG--CTCTCTCAATGT--CCC--AAAGTGCACAAATTTGCGCATGGGAGTGCCCTAAAGAACCCAAGAACTTTGTCA--GGGGTGTATTTTTGTGTGCAGTGAAGGCG--------GCGCAGGCTGGCCCAAGCGTCACCTGTTTT--AT--ATCACC----CTACCT
gi|9 : ggCCGTGAAGGCGCTTGAGCCTCGCCGGTTCG-ACCAAAGTGCGCTAGAAACAGGCTAGCCTTGCAAAA-CGTACAACATTCAAACAAGTCGTGCAGGCGTCCTACTAGACACACAGTTAAAAGCTTGCCCTCTAAATGTAGCCCA-GA-CACC-CTACTAGCGACTGGGAGTGCACCAAAta