lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 1 4444444444444444 1111 1 2222 4444444 11 111 444444444 333333333333333333333333333 2222 111 1 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11111111111 1111 1111 11 2222222222222 333333333333333333 22222222222 11 22222222 22222222222 33333333333333333333333333333333 11 333333 2222222 111 11 222222 11 11 44444444444 33333333333 1 1111 33333333 11 11 111 22222 111 1111 222222 11111 22222222222 1 11 4444444444444444444 444444 222222222 111111 1 444444444 111111 11111111 11111111 11111111111111 111 44444444444444 1 11111 11 11 111 2222222 11 2 1 1 22 1 222222222 1 22222222 1 1 11 222222 444444 222222222 111 11 11 111 1 99999999999999 1 111 6666666 1 222 222 22 1 222 333 3333333 555555 1 1 1 22 1 1 1 1 2 1111 5555555555555555 1 111 2 2222 222 22 2 2 33333333 777777777 1
lowQualScore : 11 0 5 6 5 22 3333333333333333 888 1 4 2 9 1111 8 66 0000 9999999 66 5 77 666 66 4 777 666666666 000000000000000000000000000 6 5555 4 555 7 1 777 4 3 2 2 66 4 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 55555555555 3 2 0000 0 99 4 99 44 4444 00 3 7777777777777 555555555555555555 4 11111111111 5 33 3 22222222 3 3 1 22222222222 5 55555555555555555555555555555555 5 9999 55 55 5 55 333333 1111111 3 777 6 0 0 33 1 2 666666 55 555 1 1 44 0 66666666666 3 77777777777 2 3 8888 6 88888888 1 11 4 4 33 7 111 3 2 8 44444 5 666 5 5555 666666 0 1 99999 0 00000000000 1 8 0 88 4 2222222222222222222 8 777777 777777777 33 222222 9 3 8 2 0 000000000 999999 44444444 3 5 4 66666666 5 0 5 99999999999999 666 44 33333333333333 0 88888 7777 1 44 1 66 1 44 6 33 1 777 0 9999999 2 777 3 22 0 2 0 6 8 0 5 22 6 1 0 5 55 3 7 3 3 999999999 6 8 888 1 4 4 0 2 6 7 3 1 2 11111111 0 0 3 1 2 5 33 0 0 111111 4 6 2 0 3 3 777 1 2 777 222222 0 4 3 9 00 1 3 8 33 777777777 2 2 2 4 0 777 6 3 33 444 66 0 777 2 0 2 1 2 0 0 2 00000000000000 5 888 4 55 5555555 5 111 3 2 111 4 2 44 5 4 4 2 111 2 555 6 66 2222222 4 777777 2 3 6 5 6 7 5 6 11 6 6 6 7 4 6 4 5 5 3 3 6 3 2 55 888 4 77 2 4 888 4 0000 3 1111111111111111 5 3 333 3 2 9999 2 2 0 3333 000 2 77 66 0 2 3 55 3 55 77777777 4 000000000 2 2 2 5
lowQualScore : .. . . . . .. ................ ... . . . . .... . .. .... ....... .. . .. ... .. . ... ......... ........................... . .... . ... . . ... . . . . .. . ........................................................................................................................................... . ........... . . .... . .. . .. .. .... .. . ............. .................. . ........... . .. . ........ . . . ........... . ................................ . .... .. .. . .. ...... ....... . ... . . . .. . . ...... .. ... . . .. . ........... . ........... . . .... . ........ . .. . . .. . ... . . . ..... . ... . .... ...... . . ..... . ........... . . . .. . ................... . ...... ......... .. ...... . . . . . ......... ...... ........ . . . ........ . . . .............. ... .. .............. . ..... .... . .. . .. . .. . .. . ... . ....... . ... . .. . . . . . . . .. . . . . .. . . . . ......... . . ... . . . . . . . . . . ........ . . . . . . .. . . ...... . . . . . . ... . . ... ...... . . . . .. . . . .. ......... . . . . . ... . . .. ... .. . ... . . . . . . . . .............. . ... . .. ....... . ... . . ... . . .. . . . . ... . ... . .. ....... . ...... . . . . . . . . .. . . . . . . . . . . . . . . .. ... . .. . . ... . .... . ................ . . ... . . .... . . . .... ... . .. .. . . . .. . .. ........ . ......... . . . .
lowQualScore : 00 6 7 3 7 99 8888888888888888 888 8 0 2 1 0000 1 99 4444 1111111 88 2 00 111 11 4 888 333333333 777777777777777777777777777 2 3333 0 666 7 0 888 4 8 4 0 11 4 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 8 33333333333 7 2 2222 7 22 7 22 77 2222 88 7 7777777777777 444444444444444444 3 77777777777 7 66 7 55555555 1 2 5 66666666666 0 88888888888888888888888888888888 0 5555 88 88 0 88 222222 8888888 8 555 8 8 1 88 6 1 777777 99 999 7 4 44 6 00000000000 7 00000000000 5 3 7777 7 55555555 7 55 0 0 33 2 777 7 2 3 55555 2 555 0 0000 000000 6 4 66666 9 55555555555 9 8 0 33 4 7777777777777777777 0 000000 777777777 77 888888 4 3 9 6 9 444444444 111111 44444444 0 7 0 00000000 7 7 7 55555555555555 333 88 77777777777777 8 44444 0000 4 00 8 44 4 00 0 88 2 555 8 2222222 5 000 0 55 0 5 8 0 0 6 8 00 6 4 6 0 66 2 5 3 3 333333333 6 4 444 8 0 5 0 5 5 0 2 2 5 00000000 2 0 2 2 5 0 88 2 2 555555 0 5 5 2 0 2 222 2 5 000 555555 2 0 5 8 55 2 2 8 22 222222222 5 5 5 0 2 888 5 2 88 222 55 2 555 5 0 5 2 5 2 2 5 55555555555555 0 555 0 55 0000000 5 000 0 5 555 0 5 00 0 0 0 5 000 5 000 0 55 0000000 0 555555 5 0 0 0 0 0 0 0 00 0 0 0 0 0 0 0 0 5 3 7 7 0 5 55 555 0 00 5 0 000 0 5555 0 5555555555555555 5 0 000 0 5 0000 5 5 0 5555 555 5 55 55 0 5 0 55 0 55 00000000 0 555555555 5 5 5 0
consensus : AATGCNATACCCCTAT-AAGAAAGGGGGTCCCTTGGGT----CNGCGG-AGCNTGA---CTTGGGTATNGGGTTAAT---GATACATTTA--CCCCA-NANAGATGGAACTGCG-GCCANTATTAAAACAAACATTAAANAANACATG--TAAA--A-AGT---ANAACGGN--GTATCATTTTTA-AGAACATC-CACC-G-GTANA-TTATCNATACCA-CGNGCTTTA-CCTC-N-CTTNGCATTTTCA---ACGGCTTTT-TTTACTTCAAAAACAG--ATAT-ATTATCA--T--TNAAA-A-NAAA-----------ACT---------AGTATTC-G---TGT-----T-----ACCAACGTTATT-----A---CG---ATCATT-----A--GTTCTTATGGGATCA-ACAGTA---GAGTTATANAGGTTACT--ATAATTTTTCTCCCATTT--ACTNAAAAC--ATCTTT----AACATCTGAAGTNAA-GN-----TA---CCATCAT--CCAGA------AG---AACCTCCATNGG---N-ATT--GAC-TTTT--TCTTGTNATTATN--TACGCCNATCTTACCGATA----------GATTTCC-AGAATTC-TTTGACGGAT---C--AT--CATT-TATA-TCATTT---AGCANNTC-ATTTTGTATTTTA-----NACCAAT-A-ANGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCTAGCNT----GTACAG-TANT-CAGATTTGAG-TTTATTTTT-TAGATA---ATANCATTAC----AGT----TTAANCAACCTTT-TTCGG--TTAC-AAACA-T-A----GTTCCATAAATCNGNCAAA-GTATC-GNTCCACCANGGTTTACCAG---TNCGCCTTTTNTT--ATTG-TTAAT---GCCGCAAT-ATACAGACTTGAAGGGCAG---C-CGGTTATACAT----TTCATNNTTAACNATGCTACACCAG--CCGTTAAAAGCC------A------CTATCGATA-TCATG----GTTTGTGANCGGAGAC-TGCCTTCC------AAGTCTG-CA-ATNGCGGCATTAACATTGGTAA-CAATAT--CAGTAC--CAGTCAAAAAATNA-TTTGGNANATTATG-T-ACGT-CAAATTTATCGTANCCA---TCA----GTAA-CGTCTGATTTAT-----TC-GTAA--AAACAGTTGGATTTTCAAAATTNATACACCATNTTAACANTGAATGATCTGGAATACNAGTTGGAGCA--ATTGCACGAATATT---ATTAC---AANNGTTNACGGNATCAACAGCNCNAACAACTGAAAAATCTGTCGAACAGTGATAA-ATTATCATGACTTACTAAATGCAATAGTCAACAACNGAAAAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA-AAT----TTCTCCCATTTAGCATACACATATNGGCATTGATAAGAAANTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCGACGACATTTCTTTCACACA---A-ANNATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACNGCTATTGAA--ATCTCCATATATAAACGGTA----TTCCTNCATTCTGGTATTCATACATATCCGTCAAAAGANTATCGTAAAAATTAAAAGCATCTACGTNACGGGACCT----GAGTTCTCGGGNGGNAGGTAACATACGCATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTNTAACCANAGAACACCTTCN--CTAGTGTTAT--CTAGAACAGATATGTCAAAC-CACTTT---ACAATGT-CATTNCGGATAAAAAGTCCAACTCCNCCAGAACCCGTCCTAGCCCGTATATGTATAGATATATATACGTTTGCGGTTNNNACCGNACCATNNGTAACCTTCTAGGGTCAATCTGTAGTACATCACGAGNTTTAAGATGGGNTTCNGCTNATGCCTANAATATCNANGTCTAGAGAGTTNAAAACACATGATGATCTCAANNCAAAATTGTNACTAGTAGANTCACAGTCAACACTCCAGCCNCNGACGTTCCAGAACCCGGCGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACNCGTGNACCATGTAGTGACAATTTACCACCGCGGTTGATGG-CATCAA-GATGGTTTTGAAGTTACTGGNCATCAANCGATCNNCTNNNGNTTGGTCANNGTGNATGNAGACGTCNNNANACTGNCGGCTGNTCTTCAGTGAAGACTTGNGGGACATTACCGTANCNTNATCGNCGCTGNNCNTNAACTTAGCGATTACNACGCCCGGCTCTACTGCCATCACTNGTANAGTTCTTGCGCTNNGCACTGGCGCACANAAACANNACTNACTCGNAGGCCGTCGCGTGAAATAAGNGAGTTNACCATGTTGCCGANATTCTCGTTNGCACTCTCCGGGAGGCCTCTAA
Reference ( gi|2 ) : AATGATATACCCCTAT-AAGAGAGTGGGTCTTTTGGGT----CGGCGG-AGCTTGA---CTTAGGTATAGGATTTAT---AATAGATTTA--CCCCA-TAAAGATGGAA-TACA-ACCTTTATTAAAACAAACATTAAAAAGAACATG--TAAA--A-AGT---ATACCGAA--GTATCATTTTTA-AGAACATC-CACC-G-GTATT-TTATCTATACCA-TGTGCTTTA-CCTT-T-TTTAGCATTTTCA---ATAGCTTTT-TTTACTTCTAGAATAG--ATAT-ATGCTCA--T--CCAAA-A-TAAA-----------ACT---------AGTATTC-G---TGT-----T-----ACCAACATTATT-----A---TG---ATCATT-----A--GTTCTTATGGAATCA-ATAGTA---GAGTTATAAAGGTTACT--ATAATCTTTCTCCCACTT--ACTTAAAAC--ATCCTT----AACATCTGAAGTCAA-GT-----TA---CCATCAT--CCAGA------AG---AACCTCCATTGG---A-ATT--GAC-TTTT--TCTTGTTATTATG--TATGCCTATTTTACCAATA----------GATTTCC-AGAATTC-TTT--CGGAT---C--AT--TATT-TATA-TCATTT---AACATATC-ATCTTGTATTTTA-----TACCAAT-G-ATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT----A-ACAG-TAAT-CAGATTTGAG-TTTATTTTT-TAGATAA--ATAACATTAC----AGT----TTAACCAATCTTT-TTCAGACTTAC-AAACA-G-A----GTTCCATAAATCAGTCAAA-GTATT-ATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCTT--ATTG-TTAAT---GCCGCAAC-ATACAGACCTAAAAGGCAG---C-CGGTTATACAT----TTCATGATTAACAATGTCACACCAG--CTATTAAAAGCC------A------C-ATCGATA-TCA------GTTTGTGAACGGAGAC-TGCCTTCC------AAGTCTG-CA-ATTGCGGCATTAACCTTGTTAA-CAATAC--CAGTAC--CAGCCAAAAAATCA-TTTGGCATACTATG-T-ACGT-CAAATTTATCGTATCCA---TCA----GTAA-CATCTGATTTAT-----TC-GTAA--AAACAGTTGGATTTTCAAACTTTATACACCATGTTAATACTGAATGATCTGGAATACTTGTTGGAGCA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAACTGAAAAATC-ATCGAACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA-AAT----TACGACCATTAAGAATACACATATTGGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTCAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTA-AG---------TTTTTGCGATTATTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGACCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCATTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTTGCCGTGTTCCAGCTGTGTTGGCTCTGTCTGTTTGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTGTGAAACCGATCCCGTAGAAGCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGATAGCCGTTATCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGATTATTCTTTAATGAAGACTTGGAAGACATTACCTTACTTTTATCGGCACTAGATTTCAACTTAGCGATTACCACA-CCGGCTCTACTGTTATTATTTG-ACAGT--TTACGTTCTGTACTGGCA-ACAGAGACAGAATTAATTTTCAGGCCAT---GTGAAATAAGTGAGTTGACCTTCTCATCCAGATTTTCGTTGACACTTTCGGGGAGATTTCTAA
gi|1 : AATGATATACCCCTAT-AAGAGAGTGGGTCTTTTGGGT----CGTCGG-AGCTTGA---CTTAGGTATAGGATTTATCATAATAGATTTA--CCC-A-TAAAGATGGAA-TAAA-ACCTGTATTAAAACAAAAATTAAAAAGAACATG--TTAA--A-CGT---ATACCGAA--GTATCATTTTTA-AGAACATC-CACC-G-GTATT-TTATCTATACCA-TGTGCTTTA-CCTT-TATTTAGCATTTTCA---ATAGCTTAT-TTTACTTCTTGAATAG--ATAT-ATGCTCA--T--CCAAA-A-TAAA-----------ACT---------AGTATTC-G---TGT-----T-----ACCAACATTATT-----A---TG---ATCATT-----A--GTTCTTATGGGATCA-ATAGTA---GAGTTATAAAGGTTACT--ATAATCTTTCTCCCATTTTTACTTAAAAC--ATCCTT----AACATCTGAAGTGAA-GC-----TA---CCATCAT--CCAAA------AG---TACCTCCATTGG---A-ATT--GAC-CTTT--TCTTGTTATTATG--TATGCCTAGTTTACCAATA----------GTTTTCC-AGAATTC-TT---CGGAT---C--AT--TATT-TATA-TCATTT---AATATTTC-ATCTTGTATTTTA-----TACTAAT-G-TTGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT----A-ACAG-TAAT-CAGATTTGAG-TTTTATTTT-TAGATAT--ATACCATTAC----AGT----TTAACCAATCTTT-TTCAGACTTAC-AAACA-T-A----GTTCCATAAATGAGTCAAA-GTATT-ACTCCACCAAGGCTTTCCAA---CGCGCCTTTTCTT--ATTG-TTAAT---GCCGCAAC-ATACATACCTAAAAGGCAG---C-CGGTTATACAT----TTCATGATTAACAATGTCACACTAG--CCATTAAAAGCC------A------C-ATCGATA-TCA------GTTTGTGAACGGAGAC-TGCCTTCC------AAGTCTG-CA-ATTGCGGCATTTACCTTGGTAA-CAATAT--CAGTAC--CAGCCAAAAAATCA-TTTGGCATACTATG-T-ACGT-CAAATTTATCGTATCCA---TCA----GTAA-CATCTGATTTAT-----TC-GTAA--AAACAGTTGGATTTTCAAACTTTATACACCATGTTGATACTGAATGATCTGGAATACTTGTTGGAGCA--ATTGCACTAATATT---ATTAC---AAAGGTTGACAGCATCAACAGCACGGACAACTGAAAAATC-ATCGAACAGTGATAA-ATTATCGTGATTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGATATAGATGTAAAATCATTGTTTATAA-AA----------CCATTAAGGATACACATATAAGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTAGTCTTTAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGATGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGTATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CGAGAACAGATATGTTATAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTTCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTA-AGATATATATATGTTTGCGATTGTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACACAAAATTATAACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGTGAACCATGTAATGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATTAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGAAATTGACGGTTGTTCTTTAATGAAGACTTATGGGACATTACCTTAATTTTATCGGCACTATATTTCAACTTAGCGATTACCACA-CCGACTCTACTGTTATTATTCG-ACAGT--TTACGTTCTGTACTGGCA-ACAGAAACAGAATTAATTTTCAGGCTAT---GTGAAATAAGTGAGTTG--------ATCCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|5 : tgatAATGCAATCCCTCTAT-AAGAAAGGGAGTCCTTTGGGT----C--CGT-AG-TAGAAAACTTGGGTATTGGGTTAAT---GATACATTAA--CCCCA-AATAGATGGAACTGTG--CCATTATTAAAACAAACATTAAATAAAACATGAAGAAA--A-AGA---ATG--GAC--GTATCATT---ACACAATACCTCACTTG-GAATA-TTATCAATACCA-CAAGCTTTA-ACTC-G-CTTTGCATTTTAA---ATGGCTTTT-TTTACTTCAAAAACAG--ATAT-ATTATCA--T--T-AAA-A-TGCA-----------A--------------ATTT-G----------------------CAGTATT-----A---CT---ATCATTCGAGAA--GTCTACATG---TCA-AT-GTGCCTG-GTCATGTCCATTACT--ATTATTGTAAAATAACGT--ACTAAAATC--AACTTTTCAAAACATCTGAAATAGATGTAGAAATAAAACCATCAT-----GA------AGTTTAACTTCAAAAGGTATACATTTAGAT-TTGT--ACTGGTTA--------ACACCGATCTTACCGATT----------GACTTCC-AGAA--C-TTGGACTGAT---C--GA--CATT--ACAATCAATA---AGCAATTC-ATTTTGTAAAAAA-----AACCAAT-A-AAAACGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTTCAAACTT----GTACA--TATT-CAGATTTAAG----ATTTTT-T---------TAACATTTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCATTAC-TAACA-TCA----GT-CCATATTTCTGACAAT-CTCTC-GGTCCACCATTGTTTACCAGGTCTACATCTTTTATTGTATTGATTAG----ACTG------TATAGTTTTTAAGGGTAT---A-TGGTTATACAT----ATTATTCTTAACTATATTACACTAATCCTGATAAA---C------A------CTATCGATA-TCATGTTGTGTTTGTAATC-----CTTGC--TCC------AACT-TGTCA-ATAGCAATATTAACATCA--GA-CAGCACTTCTGTAT--TATTTAGAAAATAA-TCTGGTAATTTAGT-T-AAAT-CAAATTTATCATAACTA---TTA----CTAAGC----GGTGTATAAATATC-ACAACGCAACA--TG-----TTAAAAGCAATGTTCCATTTTAACAAAGAATGATCTGGTATAAAAGTTGGTGCAAGATAACTCAAATCAT---CTGAC-----CTGTTTATTAAATCCACAGTCCTAACAATTGAAAAATCTGTAAAAC-GAGACAA-ATCATCATGAC-TGC-AAATGCAATAATCTACCACTGACAAACCCTTATTAGAAATAGATGTATAATCGTTGTTAAAAC-AAT----TTCTCCCATTTAACATACACATATTGGTACTGAtgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|4 : tggctAATGCAATCCCTCTTT-AAGAAAGGGGGTCCCTTGGGT----CCGCAGTAGAA-GA---CTTGGGTATTGGGTTAAT---GACACATTTA--CCCCA-GATAGATGGAACTGTG--CCATTATTAAAACAAACATTAAATAAAGCGTG---AAG--A-AAT---AAAATGGACGGT-TCATTACAC-AGAACCTC--ACTTG-GGATA-TTATCAATATCA-CAAGCTTTA-CCTC-G-TTTTGCATTTTCA---ACGGCTTTT-TTCACTTCAAAAACAG--ATAT-ATTATCA--T--TGAAAGA-CAGATTTATAGTGTTACT---------ATCATCC-GAAATGTCTGAAT-----GCAAATGT-ATCTGAGCA---TGTCCATCACT-----G--GTT-TTATGAAAT-A-AC-------GAACTA---AAGTCA-------ATTTT----CCACTT--GTTCAAAAC--ATCTGA----AACA---AAAGTCGA-AA-----TAGAGCCATCAT-----GA------AGTTTAACTTCAAAAGG---T-AT----AC-ATTTAGTTTTATACTTGTT--TACACCGATCTTACCGATA----------GACTTCC-AGAA--C-TTGGACTGAT---C--AA--CATTACA-A-TCATTA---AGTAATTC-ATT-----TTTTAAAGAGAACCAAT-A-AAAACGCTTTGACTTTTGTACCTCACGGTCAAATAAT--TTACGAACTT----GTACA--TATT-CAGATTTAAG----ATCTTT-T--------CTGACATTTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCATTAC-TAACATC-A----G-TCCACATTTCTGATAAT-CTCTC-GGTCCACCACTGTTTACCAGGTCTACATCTTTTATT---CTG-TTGATTAGACTG------TATAGTTTTAAAGGGTAT---T-TGATTATACAT----ATTATTCTTAACTATACTACACCAA---TCTTGATAAAC------A------CTATCGATA-TCATGTTGTGTTTATAATC-----CTTGC--TCC------AACT-TGTCA-ATAGCAATATTAACATTAGTAAGCACT-T--CTGTAT--TATTT-AGAAATGAGTCTGGTAATTTAGT-T-AAAT-TAAATTTATCATAACTA---CTACTTTGTAG-TGTTTCGTT--T-----TC-ACAACGCAACA--TG-----TTAAAAGCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGG--------TGCAAGAAAATTCAAATCACCTGACCTGTTTATTAAATCAACAGTCCTAACAACAGAAAAATCTGTAAAACAA-GACAA-ATCATCATGAC-CGC-AAATGCAATAATCTACCACTGACAAACCCTTGGTAGAAACAGATGTAAAATCGTTG-TTAGAACAAT----TTCTCCCATT
gi|7 : ttgttTATACCTCTAT-ATGACATAGGATTTCTTGGAT----CTGTGT-TTCCTGA---CTTTGGTATAGGGCTCAT---AATG--CCTAGGCCCCAGTCAAT-CGGGA-T-CATGCCAGTATTAAAACACACATTAAATAATATATG--TAAA--ATAGA---A-AAAGCA--GTGTAATTTTTA-AGTATTTC-AGAC-G-GTAGA-GTGTCAAGACCACTG-GCATTG-TCGC-T-CTTAGCACTA-AA---ACAGCCTTA-TGTACGTCTTGAAGTG--ATAT-ATA-----------AGA-ATTAAA-----------GCTTGATATAAAAGCGTT------TGT-----A-----ACTGACGGT-TT-----AGATTC---ATCATT-----ATCACCCTCCTGG--TTA-GCTGTT---ACATTATACAGAT--CTGAAAAACATGTTTTCCATTT--ATCCAAAACTGAT--TT----TGTATCC---CTTAA-GA-----TA---TCACCATTGTCAGA------AAC--CACTTCTATAGG---T-ATT--AAT-TTCT--TTTTCTGA--AAGGCTATACCAACGTTCCCACTA----------GATTTCCAAAAAATC-T-----GAAT---T--ATAAGATT-GA-A--CACTTGAAAGCAGATC-ATTTTGCAATTTA------ACCAAT-A-AAGTTGTTTCTCTTTTTGCACTTGTCTGTTAAATGTC--TTTtaaccatgtgacatttttgagttga
gi|10 : ATACCCCTGT-AAGACATAGGGTCACGTGGAT----CATTATTAGCA-GA---TTTAAGGATAGGGTTAAT---GATACCCATA--CCCCA-TTCTGAGAGAA-TAAT-TCCGGTGTTAAAACAAACATTAAATAGTACATG--TAAA--A-ACG---AGATAGCT--GTATCATTTTTA-AAAATTTC-TATA-G-GTAGA-TCATCTATACCG-CACGCCTTA-CCAT-C-CTTCGAATTAAAA---ACAGCTTTA-CGTATTTCAAAAATAGTAATATCATTTTCAAAT--TCAGGCA-CAAA-----------ATC---------ACTATT------TAT-----TGAAGCAGCAACA--GGT-----A---AA---AT------------GTTGTTATGTGATGACGCATTA-------TATAAA--TTAGA--AAAACTGTTTTTCCATTT--ATTAAGAAC--ATATTC----AGTATT----GTTA---T-----TA---ATATTTT--CCATATCGTCTAC---AACTTCCATTGG---T-AT---AATATTTT--TCTTTTGAAAACC--AACACCTATCTTTCCAATACTTTTCCAAAAATTTAC-AGAATTT-TT------AT---C--A---------ATA-TCTGAT---AAGAAGTC-ATTTTGTATTTTA-----AACCAAT-ATAT-TCGTTTAGATTTTTGAACCTCTCTATTAA--AACCTTTTCT-GCATCGTAA-AAAGTTAATACGAA---GAA-TTTTCTTTT-GAAAT----ATGTTATGAC----ATT----TCAAGTACCCTTT-TTC-----TGCAAAACA-T-ACTTTATTCCATAAATCTGACAGA--TATTCGTTCCACCAAGGTTTACCAA---TTTTCCTACCTTT--ATTG-tgagacgacatcaactcataccttaaccttttctttcacttactttggtgcattgaatatataatttttcgtttgtaattactttattccatagctcagtttacaacaagttccaccatggtttcttaactgttttttttttaattatataaacaatgtccataagagtatacttttgacggtaacttatcaaacattttccgtttaatcaacttacacaattatgaatatgacattgtaatatcttgctgaattcaaaggctatgttctaactctaaaacagtattatgcaatatttgtacaatattagttctacataaaatatcagacttattattgcaaacatcagtttttaccgcatcacctaaagcaggttgcgtttcacagttcaattcagatgtaactttgatattccaggtaagaatagagtggtctgg
gi|8 : gctattgtgCCCTTATTAAGCAAG-GGGTCCCTTGGGTTCAGCAGTAG-AA---GA---CTTGGGTATTGGGTTAAT---GATACATTTA--ACCCA-GATAGATGGAACTGTG--CCATTATTAAAACAAACATTAAACAAAACATG---AAG--A-AAT---AAAACGGAC-GTACCATT---ACACAATACCTCACT-TTGAATA-TTATCAATACCA-CAAGCTTTA-CCTCGC-TTTA-CATTTTCA---ATGGCTTTTTTTTACTTAAAAAACAG--AGTT-ATTATCA--T---TAAA-A-GACA-----------AAT----------GTA--CAG---TGT-----T-----ACTATCAT
gi|14 : tggttgcttatgcaatCCTCTGT-AAGAAAGGGGGTCTCTTGGGT----CCGTAACAGATT-A---CTTGGGTATTGTGTTAAT---GATACATTTA--CCCCA-GGTATATGGAACTGT--GCCAT--TTAAAAT-----TTAATAA-AACATG---AAG--A-AAT---AAAACGGGC-GTATCATT--------ACA---CA-----------------ATACC--------TCA-CTTT-------GCATTTTCA---ATGGCTTCT-TTAACTTCAAAAACAG--AGAT-ATTATCA--T--TAAAA-G-GCAA-----------ATT---------TGTG----G---TGT-----T-----Accgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|15 : aatgcaaccG-AACCTGA---CTTAGGAATAGGATTTAC---GATA---TTA--TTCT----AAGATCATA-TGCA-ACTAATATCAAAACATATGTAAAAAAATATATG--TAAAACA-AGT---A----GAC--GTATGTTTTTTT-AAAACATC-AATT-G-GTATG-TTTTCTCCACTA-ATCGTTTTATCCTT-C-TTT
gi|18 : gattatgcaagtgccagacctcgatatgaaagatgatatcttacattatccTAAAATAAACATTAACATGTACATG--TAAA--A-AATGACATA---------ATTTTTTTTA-AAAA-ATG-CA---G-ATAAT-TCATCGATACCA-CATGCCTTA-CCAT-T-TTTCGAA---TCAAAGACAGCTTTA-CGTATTTC-AAAATAG---TA--ATG-TCA--TTGTCAAA-gcca
gi|9 : ta-CACT-T-GTAATATTATCTATACAA-CAAGCTTTA-CATC-G-CTTTGCATTTCCA---ATGCCCTTT-TTTACTTCAAAAACAG--ATAT-ATTATCA--T--TAAAA-ttcaggtacaaaaatattatacaa
gi|3 : aacggacgaatcattacacaatacctT--ATAATCTTTCTCCCATTT--ACTTAAAAC--ATCCTT----AACATCTGAAGTCAA-GT-----TA---CCATCAT--CCAGA------AG---AACCTCCATTGG---A-ATT--GAC-TTTT--TCTTGTTATTATG--TATGCCTATTTTACCAATA----------GATTTCC-AGAATTC-TTT--CGGAT---C--AT--TATT-TATA-TCATTT---AACATATC-ATCTTGTATTTTA-----TACCAAT-G-ATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT----A-ACAG-TAAT-AAGATTTGAG-TTTATTTTT-TAGATAA--ATAACATTAC----AGT----TTAACCAATCTTT-TTCAGACTTAC-AAACA-G-A----GTTCCATAAATCAGTCAAA-GTATT-ATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCTT--ATTG-TTAAT---GCCGCAAC-ATACAGACCTAAAAGGCAG---C-CGGTTATACAT----TTCATGATTAACAATGTCACACCAG--CCATTAAAAGCC------A------C-ATCGATA-TCA------GTTTGTGAACGGAGAC-TGCCTTCC------AAGTCTG-CA-ATTGCGGCATTAACCTTGGTAA-CAATAT--CAGTAC--CAGCCAAAAAATCA-TTTGGCATACTATG-T-ACGT-CAAATTTATCGTATCCA---TCA----GTAA-CATCTGATTTAT-----TC-GTAA--AAACAGTTGGATTTTCAAACTTTATACACCATATTAATACTGAATGATCTGGAATACCTGCTGGAGCA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAACTGAAAAATC-ATCGAACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA-AAT----TACGACCATTAAGAATACACATATTGGCATTAATAAGAAATTCAATTAAAACATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCCACGTGACGGAAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTggcaaatttgcagtgtaacgattacccgagaagtctaaatgtaaatgtgcctgggcaggttcattactagtattgtaaagtaaagaactaaaatcagcttttcacttgtccaaaacatctgaaatagatgtagaaacagaaccctcattaattttaacttcaaaaggtatacgattacacctgtactggtttacacctatcttaccgactgacttccagaactttgactgattgacattataatcattaagtaattgattttgtaaagagtaccagtaaaaaatgctttgacttttgtacctcacgatcaaataatttacgaacttgtacattttcaaatttaagaattgttttaaaatttcgctttgtaatcttagctacctcattcgattggcaatactaacatcaatccacatttctggcagtctctcggtccttcactgttaatcaggtctatatattttattgtgttgattagactgtatgttttaaagggtattaggttatacatattattcttcttaactatactacaccaatcctgataaacactatcaatatcatgttgtgtttgtaaccctcgctctaacttgtcaatagcaattataacatcagtgagcacgtttgtattatctagaaacgaaaccggttattat
gi|6 : G---AACCGTCATCGG---T-ATT---AC-TTTTG-TCCTGTCATTTTT--AATTCCGATTTGGCCAATT----------TCTTTCC-AAAATTGATTT--TGGTT---TTTAT--CATT-TACA-TTTTCT---A-TATTTC-TGCTTGTACGTTA-----AACCGGT-A-ACTACGTTTAGTCCTTTGCACCTATCTCTCAAA--ACGTTTTCTAGCAG----A-ACAA-TAA---A----TAAC-TTTATTTTTCTTCACAATTTTATCAATAC----ATT----TTAACCATTCTTT-TTTGG--TTAA-ACACA-C-ATT--ATTCCA-A----AGTCAAATGT-TT-GCTCAACCATGGATTACCAG---GTCGCCTCTTATT---TTG-TAAA------CATGATAATATGGGCTTGCAGGGTAG---CGTAGCTA-ACAT----TTCCTCTTTAGCTAGGCTACATCAA--CCATTACATG-C------A------CTATCGTTA-TCA------TCTTGTGTACGAAAAC-CTCCCTCC------AAGTCTA-CA-ATAGACGTGTTTAC--TGATGA-TAATAT----ATAT--CTGACAGAAAGTCA-CGAGGTACATT-TG-TAACAT-TAAATCCATCACA---------A----ATAA--ATTCGACTT-T--------------AGACAGTTGG
gi|9 : --TACACCTATCTTACCGACT----------GACTTCC-AGAA--C-TTTGACTGATTGAC--AT--TA---TA-A-TCATTA---AGTA-ATTGATTTTGTA----AAGAG-TACCAGTAA-AAAATGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTACGAACTT----GTACAT-T-TT-CAAATTTAAGAATTGTTTTtagtatgttttattatagtgaaacttatatttaatattctagcttaaaatagagtggtagggtaaaccagatcgagatagaaaattgcctttattttattccttcactagctcggttactctgataatatgagactccgaaaataatgataacgtttttatgacttacaaaataatagtcaacaaccgaaatgcctttaacagacacagaagtgaaatcatttaaaatgcatttcgaccatttagcatacacatataagcgttgattgaaaaatcaattaaatcattcccatacgcattttacttaaaatccgcattattatgacctacttactcgtcaacaccaaaaatataatcagcggaatcaacacagctactgttaaaatatctacatatataaataatacatgttccatcattctgatgctttaaaagagtttcaaaatagttatgcacatcaacgctacgacttgagttctctggtggcaaatagcggtggataaataacactattatcaagttttaaccataaaatacatttagtagcattataaccaatagaaatgtcaaatttagaacaaagtaaattttggattaaaaacccgaccccatcagaccctgttcttgctctaatat
gi|1 : aacggacgaatcattacacaatacctcacttgtaatattatctatacaacaagctttacatcgctttgcatttccaatgcccttttttacttcaaaaacagatatattatcattaaaaggcaaatttgcagtgtaacgattacccgagaagtctaaatgtaaatgtgcctgggcaggttcattactagtattgtaaagtaaagaactaaaatcagcttttcacttgtccaaaacatctgaaatagatgtagaaacagaaccctcattaattttaacttcaaaaggtatacgattacacctgtactggttG-TAAAT---GCCGCAAT--TGCAGACTTGGAAGGCAGTCTC-CGTTCACAAAC----T----GAT-ATCGATGT------GG--CTTTTAATGGCT------AGTGTGAC-ATTGTTAATCATGAA--ATGTATAACCGG---C-TGCCTTTT------AGGTATG-TATGTTGCGGCATTAACaaaatttcgctttgtaatcttagctacctcattcgattggcaatactaacatcaatccacatttctggcagtctctcggtccttcactgttaatcaggtctatatattttattgtgttgattagactgtatgttttaaagggtattaggttatacatattattcttcttaactatactacaccaatcctgataaacactatcaatatcatgttgtgtttgtaaccctcgctctaacttgtcaatagcaattataacatcagtgagcacgtttgtattatctagaaacgaaaccggttattat
gi|3 : tgataatgatatacccctataagagagtgggtcttttgggtcgtcggagcttgacttaggtataggatttatcataatagatttacccataaagatggaataaaacctgtattaaaacaaaaattaaaaagaacatgttaaacgtataccgaagtatcatttttaagaacatccaccggtattttatctataccatgtgctttacctttatttagcattttcaatagcttattttacttcttgaatagatatatgctcatccaaaataaaactagtattcgtgttaccaacattattatgatcattagttcttatgggatcaatagtagagttataaaggttactataatctttctcccatttttacttaaaacatccttaacatctgaagtgaagctaccatcatccaaaagtacctccattggaattgaccttttcttgttattatgtatgcctagtttaccaatagttttccagaattcttcggatcattatttatatcatttaatatttcatcttgtattttatactaatgttggcgtttagagcgttgaacctctctatcaaataactttctagcataacagtaatcagatttgagttttatttttagatatataccattacagtttaaccaatctttttcagacttacaaacatagttccataaatgagtcaaagtattactccaccaaggctttccaacgcgccttttcttattG-TTAAT---GCCGCAAT--TGCAGACTTGGAAGGCAGTCTC-CGTTCACAAAC----T----GAT-ATCGATGT------GG--CTTTTAATGGCTGGTGTGA------C-ATTGTTAATCATGAA--ATGTATAACCGG---C-TGCCTTTT------AGGTCTG-TATGTTGCGGCATTAACcttggtaacaatatcagtaccagccaaaaaatcatttggcatactatgtacgtcaaatttatcgtatccatcagtaacatctgatttattcgtaaaaacagttggattttcaaactttatacaccatgttgatactgaatgatctggaatacttgttggagcaattgcactaatattattacaaaggttgacagcatcaacagcacggacaactgaaaaatcatcgaacagtgataaattatcgtgatttactaaacagaagtcaacaacggaacaacctttagtagatatagatgtaaaatcattgtttataaaaccattaaggatacacatataagcattaataagaaattcaattaaaatatcaccaaatgcattagtctttaaatcaacgacatttctttcacacaaagaatcaacaccaacaataaaatcattgttatcgccacaacggctattgaaatctccacatataaacggtattcctacattttggtattcatacatatccgtcaaaagattatcgtaaaaattaaaagcatctacgtgatgggacgagttctcgggaggaaggtaacatacgtatggtaaaataacgatatcttctgttttatgagtaagttgtaaccaaagaacaccttctctagtgttatcgagaacagatatgttataccactttacaatgtcattgcgaataaaaagttcaactcccccagaacccgtcctagcccgtatatgtaagatatatatatgtttgcgattgttaccgtaccattggtaaccttctagctgtagtacatcactagctttaagatgggattcggcaatgcctataatatctaggtttagagagttcaaacatgatgatctcaacacaaaattataactagtagaatcacaattccaacccctaacattccagaacccgacgtgtacctagcaacgacctctatgtccactaccacgtcgaccatatcctcgaccgccacgcctgccattggccgtgttccagctgtgttggccctgtctgttagagttctgaccttgttgacccgaggtttgagcagcaccagagtttgaaatcgatcccgtagaattgtcaattgaattatcggacctgggcctcgtactaccgcctcgagtatggtagccattttcacgagtgttaccattgtggtggttgcgtctattcacaactcgtgaaccatgtaatgacaatttatcaccgcggttgatggcatcaatgatggttttgaaattattagacattaagcgatcgtctcttgtttggtcattatggataaaaacgtcaggaaattgacggttgttctttaatgaagacttatgggacattaccttaattttatcggcactatatttcaacttagcgattaccacaccgactctactgttattattcgacagtttacgttctgtactggcaacagaaacagaattaattttcaggctatgtgaaataagtgagttgatccagattttcgttgacactttccgggagatttctaatgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|9 : tataatctttctcccatttacttaaaacatccttaacatctgaagtcaagttaccatcatccagaagaacctccattggaattgactttttcttgttattatgtatgcctattttaccaatagatttccagaattctttcggatcattatttatatcatttaacatatcatcttgtattttataccaatgatggcgtttagagcgttgaacctctctatcaaataactttctagcataacagtaataagatttgagtttattttttagataaataacattacagtttaaccaatctttttcagacttacaaacagagttccataaatcagtcaaagtattattccaccaaggctttccaatgcgccttttcttattTAAAGGGTAT---T-AGGTTATACATATTATTC-TTCTTAACTATACTACACCAATCCTGATAAA---C------A------CTATCAATA-TCA------TGTTGTGcttggtaacaatatcagtaccagccaaaaaatcatttggcatactatgtacgtcaaatttatcgtatccatcagtaacatctgatttattcgtaaaaacagttggattttcaaactttatacaccatattaatactgaatgatctggaatacctgctggagcaattgcacaaatattattacaaaggttgacggcatcaacagcacgtacaactgaaaaatcatcgaacagtgataaattatcatgacttactaaacagaagtcaacaacggaacaacctttagtagaaatagatgtaaaatcattgtttataaaattacgaccattaagaatacacatattggcattaataagaaattcaattaaaacatcaccaaatgcattggtcttaaaatcaacgacatttctttcacacaaagaatcaacaccaacaataaaatcattgttatcgccacaacggctattgaaatctccacatataaacggtattcctacattttggtattcatacatatccgtcaaaagattatcgtaaaaattaaaagcatccacgtgacggaacgagttctcgggaggaaggtaacatacgcatggtaaaatcacgatatcttctgttttatgagtaagttgtaaccaaagaacaccttctctagtgttatctagaacagatatattaaaccactttacaatgtcattgcgaataaaaagtccaactcccccagaacccgtcctagcccgt
gi|8 : aacggacgaatcattacacaatacctcacttgtaatattatctatacaacaagctttacatcgctttgcatttccaatgcccttttttacttcaaaaacagatatattatcattaaaaggcaaatttgcagtgtaacgattacccgagaagtctaaatgtaaatgtgcctgggcaggttcattactagtattgtaaagtaaagaactaaaatcagcttttcacttgtccaaaacatctgaaatagatgtagaaacagaaccctcattaattttaacttcaaaaggtatacgattacacctgtactggtttacacctatcttaccgactgacttccagaactttgactgattgacattataatcattaagtaattgattttgtaaagagtaccagtaaaaaatgctttgacttttgtacctcacgatcaaataatttacgaacttgtacattttcaaatttaagaattgttttaaaatttcgctttgtaatcttagctacctcattcgattggcaatactaacatcaatccacatttctggcagtctctcggtccttcactgttaatcaggtctatatattttattgtgttgattagactgtatgtttTTAACTATACTACACCAATCCTGATAAA---C------A------CTATCGATA-TCATGT---GTTTGTAA-----------TCCTCC------AACT-TGTCA-ATAGCAATATTAACAT-------CAGTA----AGCACTTCTGT------ATTA-TTTAGAAAATTAGT-T-AAAT-CAAATTTATCATAtttgtaaccctcgctctaacttgtcaatagcaattataacatcagtgagcacgtttgtattatctagaaacgaaaccggttattat
gi|16 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagactcCAATA-TCC------GTGTGGGAACGAAGAC-TGCCATCCGTGATGATGTCTG-CA-CTTGCG---TTAA-----------AATGT--CAGGGT--CGG-GAACGAATGG-GTCAGGA----ATGAT-ACGTGCAAA---ATCGAACACGTTTTCA----GTTG-TTTCTTATACATAAGAATCCGTAG--ATATATTTGCATTATCAACATTCATACACCAAG-TAAGAGTTAATGATCCGCAATACCAGTTGGAACaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|6 : AATAATGATAACGTTTTTATGACTTACAAAA--TAATAGTCAACAACCGAAATGCCTTTAACAGACACAGAAGTGAAATCATT-----TAA-AATGCATTTCGACCATTTAGCATACACATATAAGCGTTGATTGAAAAATCAATTAAATCATTCCCA-TACGCATTTTACTTAAAATC--CG-CATTATTATGACCTACTTA-CTCGTCAACACCAAAAATATAATCAG-CGGAATCAACACAGCTACTGTTAAAATATCTACATATATAAATAATACATGTTCCATCATTCTGATGCT------------TTAAAAGAGTTTCAAAATAGTTATGCACATCAACGCTAC--GACTT----GAGTTCTCTGGTGGCAAATAGCG-----GTGGATAAATAACACTA---------TTAT---CAAGTTTTAACCATAAAATACATTTA--GTAGCATTATAACC--AATAGAAATGTCAAA-----TTTAGAACAAAGTAAATTTTGGATTAAAAACCCGACCCCATCAGACCCTGTTCTTGCTCTAATAT
gi|17 : gaaccgtcatcggtattacttttgtcctgtcatttttaattccgatttggccaatttctttccaaaattgattttggtttttatcatttacattttctatatttctgcttgtacgttaaaccggtaactacgtttagtcctttgcacctatctctcaaaacgttttctagcagaacaataaataactttatttttcttcacaattttatcaatacattttaaccattcttttttggttaaacacacattattccaaagtcaaatgtttgctcaaccatggattaccaggtcgcctcttattttgtaaacatgataatatgggcttgcagggtagcgtagctaacatttcctctttagctaggctacatcaaccattacatgcactatcgttatcatcttgtgtacgaaaacctccctccaagtctacaatagacgtgtttactgatgataatatatatctgacagaaagtcacgaggtacatttgtaacattaaatccatcacaaataaattcgactttagacagttggtagtatgttttattatagtgaaacttatatttaatattctagcttaaaatagagtggtagggtaaaccagatcgagatagaaaattgcctttattttattccttcactagctcggttactctgataatatgagactccgaaTTTAGTAGAAATAGATGTATAATCGTTGTT-AGAACAAT----TTCTCCCATTTTACATACACATG---------ATAAGAAAATCTGTAAAAAGCTCACCATAATG-ATTTGTTTTAAAATCGATAACATCCCGTTCA-ATA---ATATCACCAACGCCGATAATAAAATCGTCCATT-TCGCCACATCTACTATTGAA--GTCGTCATATATA
gi|12 : ATATATAAAAGG--------CCTTCATTCTGGTATTTATAAATATCTGTTAAAAGAGTACCATAAAAA------GCAGTTACATCAAAAGACCTTGAAGAATTTTCAGGTGGTAAATAACAAACACATGGCAA-----------------CCTTATGATTAAACTTCAACCATAGAAATCCTTCAAACGAGT-TT-T--CTAAAATGGATATATCAAATTCATTAA---ATAAT-T-CGTTCTTGACAAAGAAACCAACTCCACCAGAACCGGCTCTAGCATTTTTATGTATAA---------CTTTT-CGGTTCAAACCAAACCATGTATAACCTTCTAAGGTCAATTTGT-GT---TCATGAAAT---AGATGAGTTTCTGCTTATG-CTAAAATATCAATATC---AGAATTAAAAACACATAATGATCTTAAATTAAAATTGTC------AGATTCACAGTCAACACTCCAGTCACGGACGTTCCAAAACTCGGC
gi|21 : atCAACACGTGTATCAT-TAGTGATAATT-ACCACCGCAGTTGATGGACATGAA-GAT--TTTTtgacagctaagtacgattactcttacctcggatgttttgccctcagttgttgttgcgacgtccattagtattgttgctataacttagtcccgctctggtccacctaacactac
gi|11 : G-CACCAA-AATGGTTTGGAAGTTACTGGCCATCAACTGATCTGCTGGGGATTGATCAAGGTGTATGTAGACGTTCTCATACTGTTTGCTAGTCTTCAGT-----TTTGG----C-TT-CTGTATCATGATCGTCGTTGGTCATGAATTTAGCAATTACAACGCCCGGTT----TGCCATCACTGGTAGAGTTCTTGCGCTGAGCACTGGCGCACACA-ACATCACTCACTCGGAGACCGTCGCGT---ATAAGAGAGTTCACCATGTTGCTGACATTCTCATTTGCATTCTCTGGAAGGCCTCTAA
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|13 ): ACAACAGGTAAAAATGAACATGTGTTGTTGACACATAATATAAATAAGAAAAACTGTTGGTTTTTTCACTTGTTTAGAATATGTTATTATTATTATTACTACTATTTCCTAAATCATCTACAATTTCCATTAGTATTAATGGTTAGTCTTGAATCCTAACACTTATCTTTCCAATTATTTCCAAAATGTTACATTTTTTTATATATATATTGAATGAAATATCCTTTTGTATTTTTAAC
Unaligned ( gi|19 ): ATGCAATGCTTCTGTAAGGCAAGCGGGCTATTTGATCTGTAATAGAAGATTTGGGTATTGGAATGATTATACACCTACCAATAATAAATGGAACATTTCCATTTGAAAAACAAATATTAAACAAACAATGAAGAAAAATCAACAAGGTATTAC
Unaligned ( gi|20 ): GATTTTTAACATATCTTCATAAAATATTTTCGGCATCGAAAAAAATTAATACAAATAATTGTCTTTATTTTATGACATTTAAA
Alignments
lowQualScore : 333333333333 11111 333333333 111111111 22222 22222222 11 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 33333333333333333333 111111111111111 11111111111 11111 111111111111 222 444444444444444444 222 222 2222222222 11111 111111111111111111111 11 1 2222 1111 4444444444444444444444444444444444444 1 333333333 111111 11 111111 22222 1111 11111 22222222222222222 1111 222222222222 555555 22222222222222222 111111 1 1 1111111111 11 1111 1111 22222222222222222 2222222222222222222222222222222 111111111 111 2222222 22 1 22 11 111 11 1111 444444 111 11 11 111 99999999999999 6666666 22 222 44444444 1 2 111 22 2 33 22 333 444444444
lowQualScore : 1 4 4 4 2 2 4 1 555555555555 1 9999 33333 2 4 222222222 2 1 1 9 3 55 3 3333 888888888 3 33333 3 1 22222222 0 777 1 77 6666 1 0 777 4 3 11 8 55 55 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 3 22222222222222222222 2 666666666666666 00000000000 66 1 66 66666 999999999999 1 4 1 333 222222222222222222 0 22 1 111 44 333 3 555555 1 22 1 1 4 4444444444 4 8888 666 0 99999 0 8888 11 22 888888888888888888888 7777 1 0 1 1 0 11 3 444 3 2222 55 1 4 0 4 1111 4 4 6666666666666666666666666666666666666 1 0 1 2 1 777777777 55 55 55 555555 0 11 2 8888 55 555555 2 1 1 88888 1 7777 4 11111 99999999999999999 2 5 6 1 66 0 0000 1 22 1 0 333333333333 7 000000 4 11111111111111111 111111 2 0 6 2 888 55 8888 5 1 3 8 999 2 4444444444 5 4 1 5 6666 00 4 4 5 888 0000 7777 0 6 99999999999999999 5 2222222222222222222222222222222 1 4 11 2 55 4 11 1 555555555 6 111 8888888 1 5 1 1 55 6 11 99 3 6 7 1 66 4 1 3 4 1 1 99 1 99 2 0 0 8 1 1 8 1 9 0 444 8 22 8 0 1 11 0 7777 1 3 1 0 1 0 1 3 555555 1 1 6 0 5 0 777777 1 1 222 3 0 11 0 11 444 8 1 1 66666666666666 0 333 1 22 4444444 7 7 6 1 7 1 1 44 6 1 1 1 88 1 999 222 0 88 1 99999999 0 1 11 0 0 2 4 3 3 4 1 1 6 7 0 0 0 2 0 0 0 1 1 22 333 1 222 1 11 0 333 1 0 1 0 11 0 0 6 666 7 7 6 222 1 1 0 44444 1 1 44 6 11 0 0 1 3 1 00 0 0 22 0 44 1 7 22 0 1 0 888 0 666 6 1 1 222222222 1 0 11 0 3 222
lowQualScore : . . . . . . . . ............ . .... ..... . . ......... . . . . . .. . .... ......... . ..... . . ........ . ... . .. .... . . ... . . .. . .. .. . ................................................................................................. . .................... . ............... ........... .. . .. ..... ............ . . . ... .................. . .. . ... .. ... . ...... . .. . . . .......... . .... ... . ..... . .... .. .. ..................... .... . . . . . .. . ... . .... .. . . . . .... . . ..................................... . . . . . ......... .. .. .. ...... . .. . .... .. ...... . . . ..... . .... . ..... ................. . . . . .. . .... . .. . . ............ . ...... . ................. ...... . . . . ... .. .... . . . . ... . .......... . . . . .... .. . . . ... .... .... . . ................. . ............................... . . .. . .. . .. . ......... . ... ....... . . . . .. . .. .. . . . . .. . . . . . . .. . .. . . . . . . . . . . ... . .. . . . .. . .... . . . . . . . . ...... . . . . . . ...... . . ... . . .. . .. ... . . . .............. . ... . .. ....... . . . . . . . .. . . . . .. . ... ... . .. . ........ . . .. . . . . . . . . . . . . . . . . . . . . .. ... . ... . .. . ... . . . . .. . . . ... . . . ... . . . ..... . . .. . .. . . . . . .. . . .. . .. . . .. . . . ... . ... . . . ......... . . .. . . ...
lowQualScore : 0 6 0 0 3 1 0 0 222222222222 0 6666 44444 4 0 666666666 4 0 0 1 6 00 6 2222 777777777 3 00000 5 8 11111111 1 555 0 88 9999 0 8 000 0 7 00 0 55 55 0 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 0 66666666666666666666 8 444444444444444 44444444444 11 0 11 22222 444444444444 0 4 0 333 666666666666666666 7 44 0 888 33 555 2 444444 0 66 0 4 0 4444444444 1 5555 999 8 44444 1 4444 99 00 666666666666666666666 1111 0 7 0 4 6 00 2 888 2 7777 55 0 0 7 0 6666 0 0 1111111111111111111111111111111111111 0 8 4 0 4 999999999 55 44 55 111111 8 66 4 0000 55 888888 4 0 2 88888 0 1111 0 11111 99999999999999999 0 6 2 4 11 4 6666 8 00 0 7 111111111111 3 000000 0 11111111111111111 555555 5 0 0 4 333 55 5555 5 4 7 0 777 3 2222222222 3 4 0 3 2222 66 4 4 3 888 6666 4444 2 2 44444444444444444 6 2222222222222222222222222222222 0 0 11 2 00 0 88 7 666666666 3 777 7777777 0 2 0 0 77 7 88 22 5 7 3 7 33 0 0 0 0 7 0 33 9 00 1 7 1 6 0 4 0 0 6 8 000 0 00 0 8 0 00 8 0000 0 2 0 8 0 6 0 2 666666 0 0 0 8 4 6 444444 0 0 000 2 8 00 8 22 000 0 0 0 00000000000000 7 000 0 00 7777777 3 3 7 0 3 0 0 77 7 0 0 0 00 0 333 777 7 33 0 33333333 7 0 77 7 7 5 0 0 0 0 0 0 7 3 7 0 0 5 7 7 7 0 0 00 000 0 777 0 77 7 000 0 7 0 7 77 7 7 7 777 3 3 7 777 0 0 7 33333 0 0 00 7 33 7 7 0 7 0 33 7 7 00 7 00 0 3 00 7 0 7 333 7 777 7 0 0 333333333 0 7 77 7 7 000
consensus : AATGCAATACCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNG---CGGTAGCNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCAG----ATAGA-TGGAAC---TGCG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AA--A-AATANAA-C-GGN--GTA-TCATTTTTA-AGAACATC-CACC-G-GTAT-ATTATCNATACCACGNGCTTTACCTCG-CTTTGCATTTTCA---ACGGCTTTT-TTTACTTCAAAAACAG--ATAT-ATTATC--A--TTNAAA------ANAAA-----------ATTAGTATTC-G---TGT-----T-----ACCAAC-GT-------T---ATTAC----GA--TC---AT-TA---GTTCTTATG--GGATCAACAGTA---GAGTTATAAAGGTTA-----CT--ANAAT----CTTTCTCCCACTT--ACTNAAAAC--ATCTTN----AACATCTGAA------GTNA-AGNTA---CCATCAT--CCAGA------AGTTTAACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATTG-TTTACGCCNATCTTACCGATAGATTTCC-AGAATT--CTTTGACNGA----TCGT--CATT-TAT-ATCATTT---AGCANTTCATTTTGT----ANTTTAA----A-----CCAATAAAGA-CGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAG---T--ANT-CAGA-TTTAAGTTTATT-TTT-TAGAT-A-A---T----ANCA--TTAC----AGT----TTAAGCAACCTTT-TTCGG--T------T--AC-AA--ACAT-A----GTTCCATANNTCNG---NCA--AA-GTN-TCGNTCCACCANGGTTTACCAGGTCTNCGCCTTTTNTT--ATTG-T-----TAAT---G-CCGCAA---T-ATACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT--TAA-AAG-CACTATCGATATCATGT---GTTTG-TGA--NCGGAGAC-T-GCCTTCC------AANTCTGTCAATNGCGGTAT--T----AACATCGGTAA-CAATA--TCAGTACCAGCC---AAAAAATCA-TTTGGCANATTA-TG-T--ACGT-CAA-ATTTATCGTANCCAT---CA----GTAACGTCTGATTTAT------TC-GTA--A--AAACAGTTGG----AT-TTTCA--------AAA-------TTNATACNCCATNTTAACANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCGA--ACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAGCATACACATATTGGCATTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTA-AG-T------AC-TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAAA--ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACAGT----ACTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCTTANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACG-CCGGCTCTACTGTTATTATTCG-ACAGT--TTACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC-T-TCGCC-AGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
Reference ( family-173 ) : AATGCNATACCCCTAT-AAGA-AAGGGGGTCCCTTGGGT-CNG---CGG-AGCNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCAN----ANAGA-TGGAAC---TGCGGCCANTATTAAAACAAACATTAAANAANACATGTA-AA--A-AGTANAA-C-GGN--GTA-TCATTTTTA-AGAACATC-CACC-G-GTAN-ATTATCNATACCACGNGCTTTACCTCN-CTTNGCATTTTCA---ACGGCTTTT-TTTACTTCAAAAACAG--ATAT-ATTATC--A--TTNAAA------ANAAA-----------ACTAGTATTC-G---TGT-----T-----ACCAAC-GT-------T---ATTAC----GA--TC---AT-TA---GTTCTTATG--GGATCAACAGTA---GAGTTATANAGGTTA-----CT--ATAAT----TTTTCTCCCATTT--ACTNAAAAC--ATCTTT----AACATCTGAA------GTNA-AGNTA---CCATCAT--CCAGA------AG---AACCTCCATNGGNAT-TGAC-TTTT---TCTTGTNATTA-TNTACGCCNATCTTACCGATAGATTTCC-AGAATT--CTTTGACGGA----TCAT--CATT-TAT-ATCATTT---AGCANNTCATTTTGT----ATTTTAN----A-----CCAATAANGA-CGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCTAGCNT-GTACAG---T--ANT-CAGA-TTTGAGTTTATT-TTT-TAGAT-A-A---T----ANCA--TTAC----AGT----TTAANCAACCTTT-TTCGG--T------T--AC-AA--ACAT-A----GTTCCATAAATCNG---NCA--AA-GTA-TCGNTCCACCANGGTTTACCAG---TNCGCCTTTTNTT--ATTG-T-----TAAT---G-CCGCAA---T-ATACAGACTTGAAGGGCAGC-CGGTTATACAT----TTCATNNTTAACNATGCTACACCAGCCGT--TAA-AAGCCACTATCGATATCATG----GTTTG-TGA--NCGGAGAC-T-GCCTTCC------AAGTCTG-CAATNGCGGCAT--T----AACATTGGTAA-CAATA--TCAGTACCAGTC---AAAAAATNA-TTTGGNANATTA-TG-T--ACGT-CAA-ATTTATCGTANCCAT---CA----GTAACGTCTGATTTAT------TC-GTA--A--AAACAGTTGG----AT-TTTCA--------AAA-------TTNATACACCATNTTAACANTGAATGATCTGGAATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AANNGTTNACGGNATCAACAGCNCNAACAAC-TGAAAAATCTGTCGA--ACAGTGATAA-ATTATCATGACTTACTAAATGCAATAGTCAACAACNGAAAAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCTCCCATTTAGCATACACATATNGGCATTGATAAGAAANTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCGACGACATTTCTTTCACACA---A-ANNATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACNGCTATTGAA--ATCTCCATATATAAACGGTA----TTCCTNCATTCTGGTATTCATACATATCCGTCAAAAGANTATCGTAAAAATTAAAAGCATCTACGTNACGGGACCT----GAGTTCTCGGGNGGNAGGTAACATACGCATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTNTAACCANAGAACACCTTCN--CTAGTGTTAT--CTAGAACAGATATGTCAAAC-CACTTT---ACAATGT-CATTNCGGATAAAAAGTCCAACTCCNCCAGAACCCGTCCTAGCCCGTATATGTATAGATATATATACGTTTGCGGTTNNNACCGNACCATNNGTAACCTTCTAGGGTCAATCTGTAGTACATCACGAGNTTTAAGATGGGNTTCNGCTNATGCCTANAATATCNANGTCTAGAGAGTTNAAAACACATGATGATCTCAANNCAAAATTGTNACTAGTAGANTCACAGTCAACACTCCAGCCNCNGACGTTCCAGAACCCGGCGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACNCGTGNACCATGTAGTGACAATTTACCACCGCGGTTGATGG-CATCAA-GATGGTTTTGAAGTTACTGGNCATCAANCGATCNNCTNNNGNTTGGTCANNGTGNATGNAGACGTCNNNANACTGNCGGCTGNTCTTCAGTGAAGACTTGNGGGACATTACCGTANCNTNATCGNCGCTGNNCNTNAACTTAGCGATTACNACGCCCGGCTCTACTGCCATCACTNGTANAGTTCTTGCGCTNNGCACTGGCGCACANAAACANNACTNACTCGNAGGCCGTCGCGTGAAATAAGNGAGTTNACCATGTTGCCGANATTCTCGTTNGCACTCTCCGGGAGGCCTCTAA
gi|1 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGT---CGG-AGCTTGACTTAGGTATAGGATTTATCATAATAGATTTACCC-AT----AAAGA-TGGAA----TAAAACCTGTATTAAAACAAAAATTAAAAAGAACATGTT-AA--A-CGTATAC-C-GAA--GTA-TCATTTTTA-AGAACATC-CACC-G-GTAT-TTTATCTATACCATGTGCTTTACCTTTATTTAGCATTTTCA---ATAGCTTAT-TTTACTTCTTGAATAG--ATAT-ATGCTC--A--TCCAAA------ATAAA-----------ACTAGTATTC-G---TGT-----T-----ACCAAC-AT-------T---ATTAT----GA--TC---AT-TA---GTTCTTATG--GGATCAATAGTA---GAGTTATAAAGGTTA-----CT--ATAAT----CTTTCTCCCATTTTTACTTAAAAC--ATCCTT----AACATCTGAA------GTGA-AGCTA---CCATCAT--CCAAA------AG---TACCTCCATTGGAAT-TGAC-CTTT---TCTTGTTATTA-TGTATGCCTAGTTTACCAATAGTTTTCC-AGAATT--CTT---CGGA----TCAT--TATT-TAT-ATCATTT---AATATTTCATCTTGT----ATTTTAT----A-----CTAATGTTGG-CGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAG---T--AAT-CAGA-TTTGAGTTTTAT-TTT-TAGAT-ATA---T----ACCA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------T--AC-AA--ACAT-A----GTTCCATAAATGAG---TCA--AA-GTA-TTACTCCACCAAGGCTTTCCAA---CGCGCCTTTTCTT--ATTG-T-----TAAT---G-CCGCAA---C-ATACATACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACTAGCCAT--TAA-AAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCC------AAGTCTG-CAATTGCGGCAT--T----TACCTTGGTAA-CAATA--TCAGTACCAGCC---AAAAAATCA-TTTGGCATACTA-TG-T--ACGT-CAA-ATTTATCGTATCCAT---CA----GTAACATCTGATTTAT------TC-GTA--A--AAACAGTTGG----AT-TTTCA--------AAC-------TTTATACACCATGTTGATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACTAATATT---ATTAC---AAAGGTTGACAGCATCAACAGCACGGACAAC-TGAAAAATC-ATCGA--ACAGTGATAA-ATTATCGTGATTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGATATAGATGTAAAATCATTGTTTATAA--AA------CCATTAAGGATACACATATAAGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTAGTCTTTAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGATGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGTATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CGAGAACAGATATGTTATAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTTCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTA-AGATATATATATGTTTGCGATTGTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAAA---CATGATGATCTCAACACAAAATTATAACTAGTAGAATCACAAT------TCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGTGAACCATGTAATGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATTAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGAAATTGACGGTTGTTCTTTAATGAAGACTTATGGGACATTACCTTAATTTTATCGGCACTATATTTCAACTTAGCGATTACCACA-CCGACTCTACTGTTATTATTCG-ACAGT--TTACGTTCTGTACTGGCA-ACAGAAACAGAATTAATTTTCAGGCTAT---GTGAAATAAGTGAGTTGATC------C--AGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|10 : tgatTGTGATACCCCTGT-AAGA-CATAGGGTCACGTGGAT-CAT---TATTAGCA-GATTTAAGGATAGGGTT-A--ATGATACCCATACCCCATTCTGAGAGAAT--AAT---TCCGG----TGTTAAAACAAACATTAAATAGTACATGTA-AA--A-ACGAGAT-A-GCT--GTA-TCATTTTTA-AAAATTTC-TATA-G-GTAG-ATCATCTATACCGCACGCCTTACCATC-CTTCGAATTAAAA---ACAGCTTTA-CGTATTTCAAAAATAGTAATATCATTTTC--AAATTCAGGC-----ACAAA-----------ATCACTATT------TAT-----TGAAGCAGCAAC-A------------GGTAA----AA--T------------GTTGTTATG--TGAT-GAC-GCA------TTATATAAATTA-----GA--AAAAC----TGTTTTTCCATTT--ATTAAGAAC--ATATTC----AGTATT----------GTTA---TTA---ATATTTT--CCATATCGTCTAC---AACTTCCATTGGTAT--AATATTTT---TCTTTTGAAAA-CCAACACCTATCTTTCCAATACTTTTCC-AAAAAT--TT---ACAGAATTTTTAT--CA----AT-ATCTGAT---AAGAAGTCATTTTGT----ATTTTAA----A-----CCAATATATT-CGTTTAGATTTTTGAACCTCTCTATTAA--AACCTTTTCT-GCATCGTAAAAAGTT--AATACGAA----GAATTTTCT-TTT-GAAAT---A---T----GTTA--TGAC----ATT----TCAAGTACCCTTT-TTC-----------T--GCAAA--ACAT-ACTTTATTCCATAAATCTG---ACA--GA--TATTCGTTCCACCAAGGTTTACCAA---TTTTCCTACCTTT--ATTG-tgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|11 : gctatG-CACCAA-AATGGTTTGGAAGTTACTGGCCATCAACTGATCTGCTGGGGATTGATCAAGGTGTATGTAGACGTTCTCATACTGTTTGCTAGTCTTCAGT-----TTTGG----C-TT-CTGTATCATGATCGTCGTTGGTCATGAATTTAGCAATTACAACGCCCGGTT----TGCCATCACTGGTAGAGTTCTTGCGCTGAGCACTGGCGCACACAA-CATCACTCACTCGGAGACCGTCGCGT---ATAAGAGAGTTCACCATGTTGCTGACATTCTCATTTGCATTCTCTGGAAGGCCTCTAA
gi|12 : ATATATAAAAGG--------CCTTCATTCTGGTATTTATAAATATCTGTTAAAAGAGTACCATAAAAA------GCAGTTACATCAAAAGACCTTGAAGAATTTTCAGGTGGTAAATAACAAACACATGGCAA-----------------CCTTATGATTAAACTTCAACCATAGAAATCCTTCAAACGAGT-TT-T--CTAAAATGGATATATCAAATTCATTAA---ATAAT-T-CGTTCTTGACAAAGAAACCAACTCCACCAGAACCGGCTCTAGCATTTTTATGTATA---------AC-TTTTCGGTTCAAACCAAACCATGTATAACCTTCTAAGGTCAATTTGT-GT---TCATGAAAT---AGATGAGTTTCTGCTTATG-CTAAAATATCAATATC---AGAATTAAAAACACATAATGATCTTAAATTAAAATTGTC------AGATTCACAGTCAACACTCCAGTCACGGACGTTCCAAAACTCGGCttaatacattaagagggatctcagactgttgatgatgtgggccattggtgacaatagattcaagttttgcactcatttcgttaagttcctctgctacttcaactttgatgggatctttaaaagagtctaacttaagatcaatatccttacggacacgactcatttcagagttgacacgcttgtctaacaattgggcaaatttatttgatattctctactcgaggcttgattcaagtttgtccctgcattccttaacggaagagaacagtatgtgcatgtcagcag
gi|14 : atAATGCAACCCCTCTGT-AAGA-AAGGGGGTCTCTTGGGT-CCGTAACAG-A---TTACTTGGGTATTGTGTT-A--ATGATACATTTACCCCAG----GTATA-TGGAAC---TGT-GCCAT--TTAAA------ATTTAATAAAACATG-A-AG--A-AATAAAA-CGGGC--GTA-TCATT--------ACA--------------------CAATACC-------TCAC------TTTGCATTTTCA---ATGGCTTCT-TTAACTTCAAAAACAG--AGAT-ATTATC--A--TTAAAA------GGCAA-----------ATTTGTG----G---TGT-----T-----Atgacagctaagtacgattactcttacctcggatgttttgccctcagttgttgttgcgacgtccattagtattgttgctataacttagtcccgctctggtccacctaacactac
gi|15 : AGTGCCAGACCTCGAT-ATGA-AAGATGATATCTTACAT-TAT---CCG-AACCTGACTTAGGAATAGGATT-T--ACGATA---TTATTCTA-------AGA-TCATA----TGCAACTAATATCAAAACATATGTAAAAAAATATATGTA-AAACA-AGTAGA------C--GTA-TGTTTTTTT-AAAACATC-AATT-G-GTAT-GTTTTCTCCACTAATCGTTTTATCCTT-CTTTGC
gi|16 : gattatgcaCAATATCC------GTGTG-GGA--ACGAAGAC-T-GCCATCCGTGATGATGTCTG-CACTTGCG---T--T----AA-----------AATG--TCAG----GGTCGGGAACGAATGG-GTCAGGA----A-TGAT--ACGTGCAA-A---ATCGAACACGTTTTCA----GTTGTTTCTTATACATAAGAATCC-GTA--G--ATATATTTGC----AT-TATCA--------ACA-------TTCATACACCA-AGTAAGAGTTAATGATCCGCAATACCAGTTGGAA-----Cca
gi|17 : TTTAGTAGAAATAGATGTATAATCGTTGTT-AGAAC-AATTTCTCCCATTTTACATACACAT---------GATAAGAAAATCTGTAAAAAGCTCACCATAATG-ATTTGTTTTAAAATCGATAACATCCCGTTCA-ATA---ATATCACCAACGCCGATAATAAAATCGTCCATT-TCGCCACATCTACTATTGAA--GTCGTCATATATA
gi|18 : TAAAATAAACATTAACATGTACATGTA-AA--A-AAT-------GAC--ATAATTTTTTTTA-AAAA-ATG-CA---G-ATAA-TTCATCGATACCACATGCCTTACCATT-TTTCGAA---TCAAAGACAGCTTTA-CGTATTTC-AAAATAGTAATGTCATTGTCAAA--TTCAGGT-----ACAAA-----------AATATTAT
gi|19 : taATGCAATGCTTCTGT-AAGGCAAGCGGG-CTATTTGAT-CTG---TAATAGAA-GATTTGGGTATTGGAAT-G--ATTATACACCTACCAATA----ATAAA-TGGAACATTT----CCATTTGAAAAACAAATATTAAACAAACAATGAAGAA--A-AAT-CAA-C-AAG--GTA-TTAacaa
gi|2 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGG---CGG-AGCTTGACTTAGGTATAGGATT-T--ATAATAGATTTACCCCAT----AAAGA-TGGAA----TACAACCTTTATTAAAACAAACATTAAAAAGAACATGTA-AA--A-AGTATAC-C-GAA--GTA-TCATTTTTA-AGAACATC-CACC-G-GTAT-TTTATCTATACCATGTGCTTTACCTTT-TTTAGCATTTTCA---ATAGCTTTT-TTTACTTCTAGAATAG--ATAT-ATGCTC--A--TCCAAA------ATAAA-----------ACTAGTATTC-G---TGT-----T-----ACCAAC-AT-------T---ATTAT----GA--TC---AT-TA---GTTCTTATG--GAATCAATAGTA---GAGTTATAAAGGTTA-----CT--ATAAT----CTTTCTCCCACTT--ACTTAAAAC--ATCCTT----AACATCTGAA------GTCA-AGTTA---CCATCAT--CCAGA------AG---AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTA-TGTATGCCTATTTTACCAATAGATTTCC-AGAATT--CTTT--CGGA----TCAT--TATT-TAT-ATCATTT---AACATATCATCTTGT----ATTTTAT----A-----CCAATGATGG-CGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAG---T--AAT-CAGA-TTTGAGTTTATT-TTT-TAGATAA-A---T----AACA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------T--AC-AA--ACAG-A----GTTCCATAAATCAG---TCA--AA-GTA-TTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCTT--ATTG-T-----TAAT---G-CCGCAA---C-ATACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCTAT--TAA-AAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCC------AAGTCTG-CAATTGCGGCAT--T----AACCTTGTTAA-CAATA--CCAGTACCAGCC---AAAAAATCA-TTTGGCATACTA-TG-T--ACGT-CAA-ATTTATCGTATCCAT---CA----GTAACATCTGATTTAT------TC-GTA--A--AAACAGTTGG----AT-TTTCA--------AAC-------TTTATACACCATGTTAATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCGA--ACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAGAATACACATATTGGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTCAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTA-AGTT---------TTTGCGATTATTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGACCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCATTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTTGCCGTGTTCCAGCTGTGTTGGCTCTGTCTGTTTGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTGTGAAACCGATCCCGTAGAAGCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGATAGCCGTTATCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGATTATTCTTTAATGAAGACTTGGAAGACATTACCTTACTTTTATCGGCACTAGATTTCAACTTAGCGATTACCACA-CCGGCTCTACTGTTATTATTTG-ACAGT--TTACGTTCTGTACTGGCA-ACAGAGACAGAATTAATTTTCAGGCCAT---GTGAAATAAGTGAGTTGACCTTCTCATCCAGATTTTCGTTGACACTTTCGGGGAGATTTCTAAc
gi|21 : CAACACGTGTATCAT-TAGTGATAATT-ACCACCGCAGTTGATGGACATGAA-GAT--TTTT
gi|3 : T--ATAAT----CTTTCTCCCATTT--ACTTAAAAC--ATCCTT----AACATCTGAA------GTCA-AGTTA---CCATCAT--CCAGA------AG---AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTA-TGTATGCCTATTTTACCAATAGATTTCC-AGAATT--CTTT--CGGA----TCAT--TATT-TAT-ATCATTT---AACATATCATCTTGT----ATTTTAT----A-----CCAATGATGG-CGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAG---T--AAT-AAGA-TTTGAGTTTATT-TTT-TAGAT-A-AA--T----AACA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------T--AC-AA--ACAG-A----GTTCCATAAATCAG---TCA--AA-GTA-TTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCTT--ATTG-T-----TAAT---G-CCGCAA---C-ATACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCCAT--TAA-AAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCC------AAGTCTG-CAATTGCGGCAT--T----AACCTTGGTAA-CAATA--TCAGTACCAGCC---AAAAAATCA-TTTGGCATACTA-TG-T--ACGT-CAA-ATTTATCGTATCCAT---CA----GTAACATCTGATTTAT------TC-GTA--A--AAACAGTTGG----AT-TTTCA--------AAC-------TTTATACACCATATTAATACTGAATGATCTGGAATACCTGCTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCGA--ACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAGAATACACATATTGGCATTAATAAGAAATTCAATTAAAACATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCCACGTGACGGAAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGT
gi|4 : AATGCAATCCCTCTTT-AAGA-AAGGGGGTCCCTTGGGT-CCG---CAGTAGAA-GACTTGGGTATTGGGTT-A--ATGACACATTTACCCCAG----ATAGA-TGGAAC---TGTG-CCATTATTAAAACAAACATTAAATAAAGCGTG-A-AG--A-AATAAAA-T-GGACGGT--TCATTACAC-AGAACCTC--ACTTG-GGAT-ATTATCAATATCACAAGCTTTACCTCG-TTTTGCATTTTCA---ACGGCTTTT-TTCACTTCAAAAACAG--ATAT-ATTATC--A--TTGAAAG-----ACAGATTTATAGTGTTACTATCATCC-GAAATGTCTGAAT-----GCAAAT-GTATCTGAGC---ATGTC----CA--TC---AC-TG---GTT-TTATG--AAAT-AAC-------GAACTA---AAGTCA------------AT----TTT----CCACTT--GTTCAAAAC--ATCTGA----AACA---AAA------GTCG-AAATAGAGCCATCAT-----GA------AGTTTAACTTCAAAAGGTAT---AC-ATTTAG-TTTTATACTTG-TTTACACCGATCTTACCGATAGACTTCC-AGAA----CTTGGACTGA----TCAA--CATTACA--ATCATTA---AGTAATTCATTTT---------TTAA----AGAGAACCAATAAAAA-CGCTTTGACTTTTGTACCTCACGGTCAAATAAT--TTACGAACTT-GTACA----T--ATT-CAGA-TTTAAGATC-TT-TTC-T-GAC-A-T---T-----TCG--TTG-----AGTACACTTAAGCCACCTTCGTTCGGCAT------T--AC-TA--ACATCA----GT-CCACATTTCTG---ATA--AT-CTC-TCGGTCCACCACTGTTTACCAGGTCTACATCTTTTATT---CTG-T-----TGAT------TAGAC---T-GTATAGTTTTAAAGGGTATT-TGATTATACAT----ATTATTCTTAACTATACTACACCAATC-T--TGA-TAAACACTATCGATATCATGTTGTGTTTA-TAA--TC-----C-TTGC--TCC------AACT-TGTCAATAGCAATAT--T----AACATTAGTAAGCACT---TCTGTATTATTT----AGAAATGAGTCTGGTAATTTA-GT-T--AAAT-TAA-ATTTATCATAACTAC---TACTTTGTAGTGTTTCGTT--T------TC-ACA--ACGCAACA--TG----------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGG-------------TGCAAGAAAATTCAAATCACCTGACCTGTTTATTAAATCAACAGTCCTAACAAC-AGAAAAATCTGTAAA--ACAA-GACAA-ATCATCATGAC-CGC-AAATGCAATAATCTACCACTGACAAACCCTTGGTAGAAACAGATGTAAAATCGTTG-TTAGAAC-AATTTCTCCCATTTAAC-----CATGT-GACATT
gi|5 : ttgttAATGCAATCCCTCTAT-AAGA-AAGGGAGTCCTTTGGGT-CCG---TAGTAGAA-AACTTGGGTATTGGGTT-A--ATGATACATTAACCCCAA----ATAGA-TGGAAC---TGTG-CCATTATTAAAACAAACATTAAATAAAACATGAA-GA--A-AA-AGAA-T-GGAC-GTA-TCATT---ACACAATACCTCACTTG-GAAT-ATTATCAATACCACAAGCTTTAACTCG-CTTTGCATTTTAA---ATGGCTTTT-TTTACTTCAAAAACAG--ATAT-ATTATC--A--TTAAAA------TGCAA-----------ATTTGCA----G---TAT-----T-----ACTA----T-------C---ATT-C----GA--G----A---A---GTCTACATG-----TCAAT-GTGCCTG-GTCATGTCCATTA-----CT--ATTAT----TGTAAAATAACGT--ACTAAAATC--AACTTTTCAAAACATCTGAAATAGATGTAG-AAATAAAACCATCAT-----GA------AGTTTAACTTCAAAAGGTAT---AC-ATTTAGAT-TTGTACTGG-TTAACACCGATCTTACCGATTGACTTCC-AGAA----CTTGGACTGA----TCGA--CATTACA--ATCAATA---AGCAATTCATTTTGT----AAAAAAA----A-----CCAATAAAAA-CGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTTCAAACTT-GTACA----T--ATT-CAGA-TTTAAG---ATT-TTT-T-----------T----AACA--TTTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCAT------T--AC-TA--ACATCA----GT-CCATATTTCTG---ACA--AT-CTC-TCGGTCCACCATTGTTTACCAGGTCTACATCTTTTATTGTATTGAT-----TAG----------AC---T-GTATAGTTTTTAAGGGTATA-TGGTTATACAT----ATTATTCTTAACTATATTACACTAATCCTGATAA-A---CACTATCGATATCATGTTGTGTTTG-TAA--TC-----CTT-GC--TCC------AACT-TGTCAATAGCAATAT--T----AACATCAG--A-CAGCACTTCTGTATTATTT---AGAAAATAA-TCTGGTAATTTA-GT-T--AAAT-CAA-ATTTATCATAACTAT---TA----CTAA-G--CGGTGTATAAATA-TC-ACA--ACGCAACA--TG----------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATAAAAGTTGGTG-----CAAGATAACTCAAATCAT---CTGAC-----CTGTTTATTAAATCCACAGTCCTAACAAT-TGAAAAATCTGTAAA--AC-GAGACAA-ATCATCATGAC-TGC-AAATGCAATAATCTACCACTGACAAACCCTTATTAGAAATAGATGTATAATCGTTGTTAAAAC--AATTTCTCCCATTTAACATACACATATTGGTACTGAtttgagttga
gi|6 : tggctG---AACCGTCATCGGTAT-T-AC-TTTTG--TCCTGTCATTT-TTAATTCCGATTTGGCCAATTTCTTTCC-AAAATTGATTTTGGTTT-----TTAT--CATT-TAC-ATTTTCT---A-TATTTCTGCTTGT----ACGTTAA----A-----CCGGTAACTA-CGTTTAGTCCTTTGCACCTATCTCTCAAA--ACGTTTTCTAGCA--GAACAA---T--AA---A-----TAACTTTATT-TTTCTTCAC-A-ATTTT----ATCA--ATAC----ATT----TTAACCATTCTTT-TTTGG--T------TAAAC-AC--ACAT-T----ATTCCA-AA----G---TCA--AATGT--TTGCTCAACCATGGATTACCAG---GTCGCCTCTTATT---TTG-T-----AAA-------CATGA---TAATATGGGCTTGCAGGGTAGCGTAGCTA-ACAT----TTCCTCTTTAGCTAGGCTACATCAACCAT--TAC-ATG-CACTATCGTTATCAT------CTTG-TGT--ACGAAAAC-C-TCCCTCC------AAGTCTA-CAATAGACGTGT--T----TAC--TGATGA-TAATA--T--ATATCTGAC---AGAAAGTCA-CGAGGTACATT--TG-TA-ACAT-TAA-ATCCATCACA---------A----ATAA-ATTCGACTT-T-----------------AGACAGTTGGTAGTATGTTTTATTATAGTGAAACTTATATTTAATATTCTAGCTTAAAATAGAGTGGTAGGGTAAACCAGATCGAGATAGAAA--ATTGCCTTTATTTT---ATTCC--------TTCACTAGCTCGGTTACTCTGATAATATGAGA---CT-CCGAAAATAATGATAACGTTTTTATGACTTACAAAAT--AATAGTCAACAACCGAAATGCCTTTAACAGACACAGAAGTGAAATC---ATTTAAAATGCATTTCGACCATTTAGCATACACATATAAGCGTTGATTGAAAAATCAATTAAATCATTCCCA-TACGCATTTTACTTAAAATC--CG-CATTATTATGACCTACTTA-CTCGTCAACACCAAAAATATAATCAG-CGGAATCAACACAGCTACTGTTAAAATATCTACATATATAAATAATACATGTTCCATCATTCTGATGCT------------TTAAAAGAGTTTCAAAATAGTTATGCACATCAACGCTAC--GACTT----GAGTTCTCTGGTGGCAAATAGCG-----GTGGATAAATAACACTA---------TTAT---CAAGTTTTAACCATAAAATACATTTA--GTAGCATTATAACC--AATAGAAATGTCAAA-----TTTAGAACAAAGTAAATTTTGGATTAAAAACCCGACCCCATCAGACCCTGTTCTTGCTCTAATAT
gi|7 : ATACCTCTAT-ATGA-CATAGGATTTCTTGGAT-CTG---TGT-TTCCTGACTTTGGTATAGGGCT-C--ATAATGCCTAGGCCCCAG----TCAAT-CGGGAT---CATG-CCAGTATTAAAACACACATTAAATAATATATGTA-AA--ATAGAAAAAGC-AGT--GTA---ATTTTTA-AGTATTTC-AGAC-G-GTAG-AGTGTCAAGACCACTGGCATTGTCGCT-CTTAGCA-CTAAA---ACAGCCTTA-TGTACGTCTTGAAGTG--ATAT-ATAAGA--A--TTAAAGCTTGATATAAA--------------AGCGTT------TGT-----A-----ACTGACGGT-------TTAGATT-C-----A--TC---AT-TATC-ACCCTCCTG--G--TTAGCTGTT---ACATTATACAGAT-------CTGAAAAAC----ATGTTTTCCATTT--ATCCAAAACTGATTTT------GTATCC---------CTTA-AGATA---TCACCATTGTCAGA------AAC--CACTTCTATAGGTAT-TAAT-TTCT---TTTTCTGAAAG-GCTATACCAACGTTCCCACTAGATTTCCAAAAAAT--CT-----GAA----TTATAAGATT-GA--A-CACTTGAAAGCAGATCATTTTGC----AATTTA-----A-----CCAATAAAGT-TGTTTCTCTTTTTGCACTTGTCTGTTAAATGTC--TTTTGAG-AC-G-ACA----TCAACT-CATACCTTAACCTTTTC-TTT-CACTT-A-C---TTTGGTGCA--TTGA----A-------TATATAA--TTT-TTCGT--T------T--GT-AATTACTT-T----ATTCCATAGCTCAGTTTACAACAA-GT------TCCACCATGGTTTCTTAA----CTGTTTTTTTTTTAATTA-TATAAACAAT---GTCCATAAGAGT-ATAC---TTTTGACGGTAAC-TTATCAAACAT----TTTCCGTTTAATCAACTTACA-CAATTAT--GAATATGACATTGT-AATATC---------TTGCTGAATTCAAAGGC-T-ATGTTCT------AACTCTA-AAA---CAGTAT--TATGCAATATTTGT-A-CAATA--TTAGTTCTA--C---ATAAAAT-A-TCAGACTTATTATTG-CAAACAT-CAGTTTTTACCGCATC
gi|8 : tATGCAAT-CCCTTATTAAGC-AAGGGG-TCCCTTGGGTTCAG---CAGTAGAA-GACTTGGGTATTGGGTT-A--ATGATACATTTAACCCAG----ATAGA-TGGAAC---TGTG-CCATTATTAAAACAAACATTAAACAAAACATG-A-AG--A-AATAAAA-C-GGAC-GTA-CCATT---ACACAATACCTCACT-TTGAAT-ATTATCAATACCACAAGCTTTACCTCG-CTTTACATTTTCA---ATGGCTTTTTTTTACTTAAAAAACAG--AGTT-ATTATC--A--TTAAAA------GACAA-----------AT--GTA--CAG---TGT-----T-----ACTAacctaaagcaggttgcgtttcacagttcaattcagatgtaactttgatattccaggtaagaatagagtggtctgg
gi|8 : tggttgcttATAAAGA--A-----CT--A-AAT----CATCTTTCCACTT--GACGAAAAC--ATCTGA----AATA---GAT------GTAG-AAATAGATTCATCAT-----GA------AGTTTAACTTCTAAAGGTAT---AC-ATTTAGAT-TTGT-ACTAGTTTAAACCGATCTTACCGATTGACTTCC-AGAA----CTTGGACTGA----TCGA--CA-T-TACAATCAATA---AGTAATTCATTTTGTGAAGAGT--------A-----CCAATAAAAA-CGTTTCGACTTATGTACCTCACGATCAAGTAAT--TTACGAACTG-GTACA----T--ATT-CAGA-TTTAAG---ATC-TTT-T---T-------T----AACA--TTTCGCTGAGTACACTTAAGTCACCTTCGTTCAGCAT------T--AC-TA--ACAT-A----AGTCTATATTTCTG---ACA--AT-CTC-TCGGTCCACAGCTGTTCACCAGGTCTACATCTTTTATT--G-TG-T-----TGAtcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|8 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaACTCTTAACTATACTACACCAATCCTGATAA-A---CACTATCGATATCATGT---GTTTG-TAA--T------------CCTCC------AACT-TGTCAATAGCAATAT--T----AACATCAGTAAGCACT---TCTGT---------------ATTA-TTTAGAAAATTA-GT-T--AAAT-CAA-ATTTATCATAAATAT---TA----CTGA-G--TGGTGT-T------TCAGTATCA--CAAC-GCAAC----AT-GTT-A--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGGatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|9 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagAA-C-GGAC-GAA-TCATT---ACACAATACCTCACT-T-GTAATATTATCTATACAACAAGCTTTACATCG-CTTTGCATTTCCA---ATGCCCTTT-TTTACTTCAAAAACAG--ATAT-ATTATC--A--TTAAAA------GGCAA-----------ATTTGCA----G---TGT--------------AAC-G------------ATTACCCGAGAAGTCTAAATGTAAATGTGCCTGGGCAGGTTCATTACTA---GTATTGTAAAG--TAAAGAACT--AAAATCAGCTTTTC----ACTT--GTCCAAAAC--ATCTGA----AATAGATGTA------GAAACAGA-A---CCCTCAT--T---A------ATTTTAACTTCAAAAGGTATACGA--TTAC---ACCTGTACTGG-TTTACACCTATCTTACCGACTGACTTCC-AGAA----CTTTGACTGA----TTGA--CATTATA--ATCATTA---AGTAATTGATTTTGT----A----AAGAGTA-----CCAGTAAAAAATGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTACGAACTT-GTACAT---T---TT-CAAA-TTTAAG--AATTGTTT-TAA---A-A---T----TTCGCTTTGT----AAT----CTTAGCTACCTCA-TTCGA--TTGGCAAT--AC-TA--ACAT-C----AATCCACATTTCTG---GCA--GT-CTC-TCGGTCCTTCACTGTTAATCAGGTCTATATATTTTATT--G-TG-T-----TGATTAGA-CTG------T-AT---GTTTTAAAGGGTATT-AGGTTATACATATTATTC-TTCTTAACTATACTACACCAATCCTGATAA-A---CACTATCAATATCATGTTGTGTTTG-TAA--CC-----C-TCGC--TCT------AACT-TGTCAATAGCA--ATTAT----AACATCAGTGA-tga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): ACAACAGGTAAAAATGAACATGTGTTGTTGACACATAATATAAATAAGAAAAACTGTTGGTTTTTTCACTTGTTTAGAATATGTTATTATTATTATTACTACTATTTCCTAAATCATCTACAATTTCCATTAGTATTAATGGTTAGTCTTGAATCCTAACACTTATCTTTCCAATTATTTCCAAAATGTTACATTTTTTTATATATATATTGAATGAAATATCCTTTTGTATTTTTAAC
Unaligned ( gi|20 ): GATTTTTAACATATCTTCATAAAATATTTTCGGCATCGAAAAAAATTAATACAAATAATTGTCTTTATTTTATGACATTTAAA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 1111 1111 11111111 22222 22222222 11 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 2222222 111 22222 111111 222 222 2222222222222 11111 1111111111 1111111111 1 1111 111111 4444444444444444444444444444444444 1 33 111111 111111 11 11111 222222222222222 1111 1 444444444 33333333333333333 1111 111 11 11111 2222222222222222222222222222222222 22222222222222222222222222222222222 111111111 111 2222222 11 1 22 11 111 11 1111 5555555 111 11 11 111 77777777777777 4444444 1 444 555555 1 1 11 1 1 1 11 11 222 6666666666 1
lowQualScore : 1 2 4 4 2 4 1 777 999 1 9999 2222 44 4 9999 0 1 0 9 3 55555 2 99999999 3 33333 3 1 22222222 0 55 3 1 77 9999 3 0 777 4 3 11 8 55 55 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 66 1 66 999 22 9999 1 66 22 1111111 1 5555 555 11111 4 444444 0 22 111 44 333 3 11 3 1 22 1 1 4 3333333333333 1 99 99999 0 9999999999 11 22 8888 9999999999 7777 1 0 1 1 0 0 55 1 555 3 7777 1 1 4 4 777777 4 4 2222222222222222222222222222222222 2 0 1 2 1 33 111111 55 55 55 555555 0 77 2 8888 55 777 4 2 2 1 1 33 2 11 1 55 5 4 11111 888888888888888 5 2 2 1 66 0 0000 1 22 1 4 1 66 66 3 7 444444444 4 11111111111111111 1 6666 1 1 9999 4 0 2 8 000 3 0 99 2 4 5 1 5 11 1 777 77777 9999999999999999999999999999999999 3 99999999999999999999999999999999999 1 1 22 3 22 1 11 1 555555555 6 111 7777777 1 5 1 1 22 6 99 99 3 6 7 1 88 1 1 1 4 1 1 99 1 66 1 66 5 1 33 1 1 8 1 3 0 444 8 0 8 0 11 0 7777 1 3 0 0 1 0 3 1111111 1 1 6 0 3 0 777777 1 222 3 0 11 0 11 444 8 44444444444444 1 3333333 7 7 7 3 6 7 222 7 0 888888 0 1 1 1 1 1 0 6 7 0 5 2 6 55 7 7 3 1 0 0 3 6 3 3 88 44 6 0 333 6 5555555555 3 3
lowQualScore : . . . . . . . ... ... . .... .... .. . .... . . . . . ..... . ........ . ..... . . ........ . .. . . .. .... . . ... . . .. . .. .. . ................................................................................................................................................................... .. . .. ... .. .... . .. .. ....... . .... ... ..... . ...... . .. ... .. ... . .. . . .. . . . ............. . .. ..... . .......... .. .. .... .......... .... . . . . . . .. . ... . .... . . . . ...... . . .................................. . . . . . .. ...... .. .. .. ...... . .. . .... .. ... . . . . . .. . .. . .. . . ..... ............... . . . . .. . .... . .. . . . .. .. . . ......... . ................. . .... . . .... . . . . ... . . .. . . . . . .. . ... ..... .................................. . ................................... . . .. . .. . .. . ......... . ... ....... . . . . .. . .. .. . . . . .. . . . . . . .. . .. . .. . . .. . . . . . . ... . . . . .. . .... . . . . . . . ....... . . . . . . ...... . ... . . .. . .. ... . .............. . ....... . . . . . . ... . . ...... . . . . . . . . . . . . . .. . . . . . . . . . . .. .. . . ... . .......... . .
lowQualScore : 1 1 0 0 3 0 0 555 000 0 6666 5555 11 0 1111 8 0 5 1 6 55555 3 33333333 3 00000 5 8 11111111 1 66 6 0 88 0000 6 8 000 0 7 00 0 55 55 0 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11 0 11 888 00 2222 0 11 77 6666666 0 3333 666 99999 4 444444 7 44 888 33 555 2 66 6 2 66 0 4 0 4444444444444 0 22 55555 3 9999999999 99 22 5555 7777777777 3333 0 7 0 4 6 8 55 0 222 2 1111 0 6 0 0 111111 0 0 8888888888888888888888888888888888 5 8 4 0 4 00 555555 55 44 55 111111 9 33 4 0000 55 999 9 3 4 0 2 11 4 99 0 55 2 4 11111 222222222222222 0 0 8 4 11 4 6666 8 99 3 4 7 88 11 3 3 333333333 4 66666666666666666 0 0000 0 7 4444 4 7 4 9 111 8 4 00 9 5 0 0 0 99 1 111 00000 5555555555555555555555555555555555 9 88888888888888888888888888888888888 0 0 88 7 00 0 88 7 666666666 3 777 5555555 0 2 0 0 00 7 77 22 5 7 3 7 88 0 0 0 0 7 0 33 9 00 0 44 7 7 66 4 4 0 0 8 8 000 0 6 0 8 00 8 0000 4 2 6 8 0 6 2 4444444 4 0 0 8 8 6 444444 4 444 2 8 00 8 22 000 0 77777777777777 0 3333333 3 3 3 3 7 3 000 3 7 777777 7 0 0 0 0 0 7 7 3 0 5 5 7 77 3 3 3 0 7 7 3 7 7 3 33 00 7 7 333 7 0000000000 3 7
consensus : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA----GAT-AGA-TGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAA--A--ATANAAC-GGA--GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTTTT-TTTACTTCAAAAACAG--ATAT-ATTATC--A--TTNAAA------GNNAAAT---T---AGT---------A---------TTC-G---TG----T-----T-----AC----CAAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTTA--ACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCC-AGAATT--CT---TTGACNGATCGNCATT-TAT-ATCATT------T---AGCANTTCATTTTGT----ANTTTAA----ACCAATAAAGA-CGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--TTAC----AGT----TTAAGCAACCTTT-TTCGG--TT------A--C-AA--ACAT-A----GTTCCATANNTCNG---NCA--AA-NTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCATTAN-AA--GC-ACTATCGATATCA---TGT---GTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--A--AACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-------T-AT-TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAAA---CATGATGATCTCAACATAAAATTATCACTAGTAGAATCACAAT------TCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC-T-TC----CC-AGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
Reference ( family-173 ) : AATGCAATACCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGCNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA----GAT-AGA-TGGAACTGCG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAA--A--ATANAAC-GGN--GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTTTT-TTTACTTCAAAAACAG--ATAT-ATTATC--A--TTNAAA------ANAAAAT---T---AGT---------A---------TTC-G---TG----T-----T-----AC----CAAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--ANA--ATC--TTTCTCCCACTT--ACTNAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTTA--ACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATTGTTTACGCCNATCTTACCGATAGATTTCC-AGAATT--CT---TTGACNGATCGTCATT-TAT-ATCATT------T---AGCANTTCATTTTGT----ANTTTAA----ACCAATAAAGA-CGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--TTAC----AGT----TTAAGCAACCTTT-TTCGG--TT------A--C-AA--ACAT-A----GTTCCATANNTCNG---NCA--AA-GTNTCGNTCCACCANGGTTTACCAGGTCTNCGCCTTTTNT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCATTAA-AA--GC-ACTATCGATATCA---TGT---GTTTG-TGA--NCGGAGAC-T-GCCTTCCAANTCTGTCAATNGCGGTATT----AACATCGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCTGATT---TAT-----TC-GTA--A--A--AACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAACANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCATTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T-----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-------T-AC-TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAAA--ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACAGT----ACTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC-T-TC---GCC-AGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|1 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGTCGG-AGCTTGACTTAGGTATAGGATTTATCATAATAGATTTACCC-A----TAA-AGA-TGGAATAAAA-CCTGTATTAAAACAAAAATTAAAAAGAACATGTT-AAA--C--GTATACC-GAA--GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTATTTAGCATTTTCA---ATAGCTTAT-TTTACTTCTTGAATAG--ATAT-ATGCTC--A--TCCAAA------ATAAAAC---T---AGT---------A---------TTC-G---TG----T-----T-----AC----CAAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GGATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCATTTTTACTTAAAAC--ATCCTTAACA--TCT-GAAGTGA-AGCTA---CCATCAT--CCAAA-AGT-----ACCTCCATTGGAAT-TGAC-CTTT---TCTTGTTATTATGTATGCCTAGTTTACCAATAGTTTTCC-AGAATT--CT---T---CGGATCATTATT-TAT-ATCATT------T---AATATTTCATCTTGT----ATTTTAT----ACTAATGTTGG-CGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTTAT-TTT-TAGATATA-T----ACCA--TTAC----AGT----TTAACCAATCTTT-TTCAGACTT------A--C-AA--ACAT-A----GTTCCATAAATGAG---TCA--AA-GTATTACTCCACCAAGGCTTTCCAA---CGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACATACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACTAGCCATTAA-AA--GCCAC-ATCGATATCA---------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----TACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--A--AACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTGATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACTAATATT---ATTAC---AAAGGTTGACAGCATCAACAGCACGGACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCGTGATTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGATATAGATGTAAAATCATTGTTTATAA--AA------CCATTAAG-GATAC-ACATATAAGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTAGTCTTTAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGATGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGTATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CGAGAACAGATATGTTATAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTTCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAGATATATAT-ATGTTTGCGATTGTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAAA---CATGATGATCTCAACACAAAATTATAACTAGTAGAATCACAAT------TCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGTGAACCATGTAATGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATTAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGAAATTGACGGTTGTTCTTTAATGAAGACTTATGGGACATTACCT-TAATTTTATCGGCACTATATTTCAACTTAGCGATTACCACACC-GACTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAAACAGAATTAATTTTCAGGCTAT---GTGAAATAAGTGAGTTGAT----------CC-AGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|10 : tgatTGTGATACCCCTGT-AAGA-CATAGGGTCACGTGGAT-CATTATTAGCA-GATTTAAGGATAGGGTT-A--ATGATACCCATACCCCATTCTGAG-AGAAT--AATT----CCGGTGTTAAAACAAACATTAAATAGTACATGTA-AAA--ACGAGATAGC---T--GT-ATCATTTTTA-AAAATTTC-TATA-G-GTA-GATC-ATCTATACCGCACGCCTTACCATC-CTTC-GAATTAAAA---ACAGCTTTA-CGTATTTCAAAAATAGTAATATCATTTTC--AAATTCAGGC-----ACAAAAT---C---ACT---------A---------TT------TA----T-----TGAAGCAG----CAAC-A------------G-GTAA----AA--T------------GTTGTTATG--TGATGACGCATTA----TATAAA--TTA-----GA--AAA--ACT--GTTTTTCCATTT--ATTAAGAAC--ATATTCAGTA--TT-----GTTA---TTA---ATATTTT--CCATATCGTCTACAACTTCCATTGGTAT--AATATTTT---TCTTTTGAAAACCAACACCTATCTTTCCAATACTTTTCC-AAAAAT--TT------ACAGA-----ATT-TTT-ATCAATATCTGAT---AAGAAGTCATTTTGT----ATTTTAA----ACCAATATATT-CGTTTAGATTTTTGAACCTCTCTATTAAA-ACC--TTTTCTGCATCGTAAAA---AGTTA-A-TACGAAGAATTTTCT-TTT-GAAAT--A-T----GTTA--TGAC----ATT----TCAAGTACCCTTT-TTC-----T------G--CAAA--ACAT-ACTTTATTCCATAAATCTG---ACA--GA-TATTCGTTCCACCAAGGTTTACCAATTTTCCTACCTTTAT--Ttgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|11 : gctatG-CACCAA-AATGGTTTGGAAGTTACTGGCCATCAACTGATCTGCTGGGGATTGATCAAGGTGTATGTAGACGTTCTCATACTGTTTGCTAGTCTTCAGT-----TTTGG----C-TT--CTGTATCATGATCGTCGTTGGTCATGAATTTAGCAATTACAACGCCCGGTT----TGCCATCACTGGTAGAGTTCTTGCGCTGAGCACTGGCGCACA-CAACATCACTCACTCGGAGACCGTCGCGT---ATAAGAGAGTTCACCATGTT---GCTGACATTCTCATTTGCATTCTCTGGAAGGCCTCTAAg
gi|12 : ATATATAAAAGG--------CCTTCATTCTGGTATTTATAAATATCTGTTAAAAGAGTACCATAAAAA------GCAGTTACATCAAAAGAC-CTTGAAGAATTTTCAGGTGGTAAATAACAAACACATGGCAA-----------------CCTTATGATTAAACTTCAACCATAGAAATCCTTCAAACGAGT-TT-T--CTAAAATGGATATATCAAATTCATTAA---ATAAT-T-CGTTCTTGACAAAGAAACCAACTCCACCAGAACCGGCTCTAGCATTTTTATGTA---------TAAC-TTTTCGGTTCAAACCAAACCATGTATAACCTTCTAAGGTCAATTTGT-GT---TCATGAAAT---AGATGAGTTTCTGCTTATG-CTAAAATATCAATATC---AGAATTAAAAACACATAATGATCTTAAATTAAAATTGTC------AGATTCACAGTCAACACTCCAGTCACGGACGTTCCAAAACTCGGCttaatacattaagagggatctcagactgttgatgatgtgggccattggtgacaatagattcaagttttgcactcatttcgttaagttcctctgctacttcaactttgatgggatctttaaaagagtctaacttaagatcaatatccttacggacacgactcatttcagagttgacacgcttgtctaacaattgggcaaatttatttgatattctctactcgaggcttgattcaagtttgtccctgcattccttaacggaagagaacagtatgtgcatgtcagcag
gi|14 : atAATGCAACCCCTCTGT-AAGA-AAGGGGGTCTCTTGGGT-CCGTAACAGATT-ACTTGGGTATTGTGTT-A--ATGATACATTTACCCCA----GGT-ATA-TGGAACTGTG-CCAT--TTAAA------ATTTAATAAAACATG-A-AGA--A--ATAAAACGGGC--GT-ATCATT--------ACA---------------------CAATACC-------TCAC------TTT-GCATTTTCA---ATGGCTTCT-TTAACTTCAAAAACAG--AGAT-ATTATC--A--TTAAAA------GGCAAAT---T---TGT---------G-------------G---TG----T-----T-----Atgacagctaagtacgattactcttacctcggatgttttgccctcagttgttgttgcgacgtccattagtattgttgctataacttagtcccgctctggtccacctaacactac
gi|15 : AGTGCCAGACCTCGAT-ATGA-AAGATGATATCTTACAT-TATCCG-AACCTGACTTAGGAATAGGATT-T--ACGATA---TTATTCTAA---GATCATA-TGCAACT------AATATCAAAACATATGTAAAAAAATATATGTA-AAACAA--GTAGA-----C--GT-ATGTTTTTTT-AAAACATC-AATT-G-GTA-TGTT-TTCTCCACTAATCGTTTTATC-CTTCTTT-GC
gi|16 : gattatgcaAT-----CC-GTA--G--A--TATATTTGC----AT-T----ATCA--------ACA-------TTCATACACCA-AGTAAGAGTTAATGATCCGCAATACCAGTTGGAA-----Cca
gi|17 : caatatccgtgtgggaacgaagactgccatccgtgatgatgtctgcacttgcgttaaaatgtcagggtcgggaacgaatgggtcaggaatgatacgtgcaaaatcgaacacgttttcagttgtttcttatacataagaTTTAGTAGAAATAGATGTATAATCGTTGTT-AGAAC-AATTTCTCCCATTTTA-CATAC-ACAT---------GATAAGAAAATCTGTAAAAAGCTCACCATAATG-ATTTGTTTTAAAATCGATAACATCCCGTTCA-ATA---ATATCACCAACGCCGATAATAAAATCGTCCATT-TCGCCACATCTACTATTGAA--GTCGTCATATATA
gi|18 : TAAAATAAACATTAACATGTACATGTA-AAA--A--AT------GAC--ATAATTTTTTTTA-AAAA-ATG-CA---G-ATA--ATTCATCGATACCACATGCCTTACC-ATTTTTC-GAA---TCAAAGACAGCTTTA-CGTATTTC-AAAATAGTAATGTCATTGTCAAA--TTCAGGT-----ACAAAAA---T---ATT---------A---------T
gi|19 : taATGCAATGCTTCTGT-AAGGCAAGCGGG-CTATTTGAT-CTGTAATAGAA-GATTTGGGTATTGGAAT-G--ATTATACACCTACCAAT----AAT-AAA-TGGAACATTT-CCATTTGAAAAACAAATATTAAACAAACAATGAAGAAA--A--AT-CAAC-AAG--GT-ATTAacaa
gi|2 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGGCGG-AGCTTGACTTAGGTATAGGATT-T--ATAATAGATTTACCCCA----TAA-AGA-TGGAA-TACAACCTTTATTAAAACAAACATTAAAAAGAACATGTA-AAA--A--GTATACC-GAA--GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTTTTA-GCATTTTCA---ATAGCTTTT-TTTACTTCTAGAATAG--ATAT-ATGCTC--A--TCCAAA------ATAAAAC---T---AGT---------A---------TTC-G---TG----T-----T-----AC----CAAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GAATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCACTT--ACTTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG---A--ACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCC-AGAATT--CT---TT--CGGATCATTATT-TAT-ATCATT------T---AACATATCATCTTGT----ATTTTAT----ACCAATGATGG-CGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--TTAC----AGT----TTAACCAATCTTT-TTCAGACTT------A--C-AA--ACAG-A----GTTCCATAAATCAG---TCA--AA-GTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCTATTAA-AA--GCCAC-ATCGATATCA---------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGTTAA-CAATA--CCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--A--AACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTAATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTCAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-------T--T-TTTGCGATTATTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAAA---CATGATGACCTCAACATAAAATTATCACTAGTAGAATCACAAT------TCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCATTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTTGCCGTGTTCCAGCTGTGTTGGCTCTGTCTGTTTGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTGTGAAACCGATCCCGTAGAAGCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGATAGCCGTTATCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGATTATTCTTTAATGAAGACTTGGAAGACATTACCT-TACTTTTATCGGCACTAGATTTCAACTTAGCGATTACCACACC-GGCTCTACTGTTATTATTTG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAGACAGAATTAATTTTCAGGCCAT---GTGAAATAAGTGAGTTGACC-T-TCTCATCC-AGATTTTCGTTGACACTTTCGGGGAGATTTCTAAc
gi|21 : CAACACGTGTATCAT-TAGTGATAATT-ACCACCGCAGTTGATGGACATGAA-GAT--TTTT
gi|3 : T--ATA--ATC--TTTCTCCCATTT--ACTTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG---A--ACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCC-AGAATT--CT---TT--CGGATCATTATT-TAT-ATCATT------T---AACATATCATCTTGT----ATTTTAT----ACCAATGATGG-CGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATAAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--TTAC----AGT----TTAACCAATCTTT-TTCAGACTT------A--C-AA--ACAG-A----GTTCCATAAATCAG---TCA--AA-GTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCCATTAA-AA--GCCAC-ATCGATATCA---------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--A--AACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATATTAATACTGAATGATCTGGAATACCTGCTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAACATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCCACGTGACGGAAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGT
gi|4 : AATGCAATCCCTCTTT-AAGA-AAGGGGGTCCCTTGGGT-CCGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGACACATTTACCCCA----GAT-AGA-TGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAGCGTG-A-AGA--A--ATAAAAT-GGACGGT--TCATTACAC-AGAACCTC--ACTTG-GGA-TATT-ATCAATATCACAAGCTTTACC-TCGTTTT-GCATTTTCA---ACGGCTTTT-TTCACTTCAAAAACAG--ATAT-ATTATC--A--TTGAAA------GACAGATTTAT---AGTGTTACTATCA---------TCC-GAAATG----TCTGAAT-----GC----AAAT-GTATCTGAGC---A-TGTC----CA--TC---AC-TG---GTT-TTATG--AAAT-A-AC----GA------------A-----CT--AAA--GTC--AATTTTCCACTT--GTTCAAAAC--ATCTGAAACA------AAAGTCG-AAATAGAGCCATCAT-----GA-AGTTTA--ACTTCAAAAGGTAT---AC-ATTTAG-TTTTATACTTGTTTACACCGATCTTACCGATAGACTTCC-AGAA----CT---TGGACTGATCAACATTACA--ATCATT------A---AGTAATTCATTTTTT----AAAGAGA----ACCAATAAAAA-CGCTTTGACTTTTGTACCTCACGGTCAAATAAT--TTACGAACTT-GTACA-T--ATTCAGA-T-TTAAG--ATC-TT-TTC-T-GACA-T-T-----TCG--TTG-----AGTACACTTAAGCCACCTTCGTTCGGCATT------A--C-TA--ACATCA----GT-CCACATTTCTG---ATA--AT-CTCTCGGTCCACCACTGTTTACCAGGTCTACATCTTTTAT--T-CTG-T-----TGAT------TAGAC---TG-TATAGTTTTAAAGGGTATT-TGATTATACAT----ATTATTCTTAACTATACTACACCAATC-TTGATAA--AC-ACTATCGATATCA---TGTTGTGTTTA-TAA--TC-----C-TTGC--TCCAACT-TGTCAATAGCAATATT----AACATTAGTAAGCACT---TCTGTATTATTTAGAAA-TGAGTCTGGTAATTTA-GTT--AAATTAAATTTATCATAAC-TACTACTTTGTAGTGTTTCGTT---T-------TC-ACA--A--CGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGG-------------TGCAAGAAAATTCAAATCACCTGACCTGTTTATTAAATCAACAGTCCTAACAAC-AGAAAAATCTGTAA--AACAA-GACAA-ATCATCATGAC-CGC-AAATGCAATAATCTACCACTGACAAACCCTTGGTAGAAACAGATGTAAAATCGTTG-TTAGAAC-AATTTCTCCCATTTAACCATGTGACATTTTTGAGTTGA
gi|5 : ttgttAATGCAATCCCTCTAT-AAGA-AAGGGAGTCCTTTGGGT-CCGTAGTAGAA-AACTTGGGTATTGGGTT-A--ATGATACATTAACCCCA----AAT-AGA-TGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAACATGAA-GAA--A--A-AGAAT-GGAC-GT-ATCATT---ACACAATACCTCACTTG-GAA-TATT-ATCAATACCACAAGCTTTAAC-TCGCTTT-GCATTTTAA---ATGGCTTTT-TTTACTTCAAAAACAG--ATAT-ATTATC--A--TTAAAA------TGCAAAT---TTGCAGT---------ATTACTATCATTC-G---AGAAGTC-----T-----ACATGTCAAT-GTGCC----T---GGTCAT----GT--CC---AT-TA----CTATTAT------T------GTAAA---ATAACG--TA-----CT--AAA--ATC---------AACTT---TTCAAAAC--ATCTGAAATAGATGTAGAAATAA-A---A---CCATCAT-----GA-AGTTTA--ACTTCAAAAGGTAT---AC-ATTTAGAT-TTGTACTGGTTAACACCGATCTTACCGATTGACTTCC-AGAA----CT---TGGACTGATCGACATTACA--ATCAAT------A---AGCAATTCATTTTGT----AAAAAAA----ACCAATAAAAA-CGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTTCAAACTT-GTACA-T--ATTCAGA-T-TTAAG-----ATT-TTT-T--------T----AACA--TTTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCATT------A--C-TA--ACATCA----G-TCCATATTTCTG---ACA--AT-CTCTCGGTCCACCATTGTTTACCAGGTCTACATCTTTTATTGTATTGAT-----TAG----------AC---TG-TATAGTTTTTAAGGGTATA-TGGTTATACAT----ATTATTCTTAACTATATTACACTAATCCTGAT-AA--AC-ACTATCGATATCATGTTGT---GTTTG-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATCAG--A-CAGCACTTCTGTATTATTTAGAAAATAA-TCTGGTAATTTA-GTT--AAATCAAATTTATCATAAC-TATTA----CTAA-G--CGGTG---TATAAATATC-ACA--ACGC--AACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATAAAAGTTGGTG-----CAAGATAACTCAAATCAT---CTGAC-----CTGTTTATTAAATCCACAGTCCTAACAAT-TGAAAAATCTGTAA--AAC-GAGACAA-ATCATCATGAC-TGC-AAATGCAATAATCTACCACTGACAAACCCTTATTAGAAATAGATGTATAATCGTTGTTAAAAC--AATTTCTCCCATTTAA-CATAC-ACATATTGGTACTGA
gi|6 : tggctA--ACCGTCATCGGTAT-T-AC-TTTTG--TCCTGTCATTTTTAATTCCGATTTGGCCAATTTCTTTCC-AAAATTGATT---TTGGTTT-TTATCATT-TAC-ATTTTC------T---A-TATTTCTGCTTGT----ACGTTAA----ACCGGTAACTA-CGTTTAGTCCTTTGCACCTATCTCTCAAA--ACGTTTTCTAGCA--GAACAAT--AA----A-T---AAC--TTTATT-TTTCTTCACA-A-TTTT-ATCA--ATAC----ATT----TTAACCATTCTTT-TTTGG--TT------AAAC-AC--ACAT-T----ATTCCAAA-----G---TCA--AATGTTT-GCTCAACCATGGATTACCAGGTC---GCCTCTTAT--T-TTG-T-----AAA-------CATGA---TAATATGGGCTTGCAGGGTAGCGTAGCTA-ACAT----TTCCTCTTTAGCTAGGCTACATCAACCATTAC-AT--GC-ACTATCGTTATCA---T------CTTG-TGT--ACGAAAAC-C-TCCCTCCAAGTCTA-CAATAGACGTGTT----TAC--TGATGA-TAATA--T--ATATCTGACAGAAAGTCA-CGAGGTACATT--TGTA-ACATTAAATCCATCACA-------A----ATAA-ATTCGACT---T-T----------------A--GACAGTTGGTAGTATGT----TTTATTATAGTGAAACTTATATTTAATATTCTAGCTTAAAATAGAGTGGTAGGGTAAACCAGATCGAGATAGAAA--ATTGCCTTTATTTT---ATTCC--------TTCACTAGCTCGGTTACTCTGATAATATGAGA---CT-CCGAAAATAATGATAACGTTTTTATGACTTACAAAAT--AATAGTCAACAACCGAAATGCCTTTAACAGACACAGAAGTGAAATC---ATTTAAAATGCATTTCGACCATTTAG-CATAC-ACATATAAGCGTTGATTGAAAAATCAATTAAATCATTCCCA-TACGCATTTTACTTAAAATC--CG-CATTATTATGACCTACTTA-CTCGTCAACACCAAAAATATAATCAG-CGGAATCAACACAGCTACTGTTAAAATATCTACATATATAAATAATACATGTTCCATCATTCTGATGCT------------TTAAAAGAGTTTCAAAATAGTTATGCACATCAACGCTAC--GACTT-----GAGTTCTCTGGTGGCAAATAGCG-----GTGGATAAATAACACTA---------TTAT---CAAGTTTTAACCATAAAATACATTTA--GTAGCATTATAACC--AATAGAAATGTCAAA-----TTTAGAACAAAGTAAATTTTGGATTAAAAACCCGACCCCATCAGACCCTGTTCTTGCTCTAATAT
gi|7 : gATACCTCTAT-ATGA-CATAGGATTTCTTGGAT-CTGTGTT-TCCTGACTTTGGTATAGGGCT-C--ATAATGCCTAGGCCCCA----GTC-AAT-CGGGATCATG-CCAGTATTAAAACACACATTAAATAATATATGTA-AAA--T--AGAAAAA-GCA--GT-GTAATTTTTA-AGTATTTC-AGAC-G-GTA-GAGT-GTCAAGACCACTGGCATTGTC-GCTCTTA-GCA-CTAAA---ACAGCCTTA-TGTACGTCTTGAAGTG--ATAT-ATAAGA--A--TTAAAGCTTGATATAAA---------AGC---------G---------TT------TG----T-----A-----AC----TGACGGT-------TTAGA-TT-C-----A--TC---AT-TATC-ACCCTCCTG--G--TTA-GCTGTTACATTATACAGAT-------CTGAAAA--ACA--TGTTTTCCATTT--ATCCAAAACTGATTTTG--TA--TCC----CTTA-AGATA---TCACCATTGTCAGA-AACC----ACTTCTATAGGTAT-TAAT-TTCT---TTTTCTGAAAGGCTATACCAACGTTCCCACTAGATTTCCAAAAAAT--CTGAATTATAAGATTG----------AACACT------TGAAAGCAGATCATTTTGC----AATTT-A----ACCAATAAAGT-TGTTTCTCTTTTTGCACTTGTCTGTTAAATGTC--TTTTGAG-AC-G-ACA-TCAACTCATACC-TTAAC--CTTTTC-TTT-CACTTA-C-TTTGGTGCA--TTG-----AAT----ATA--TAA--TTT-TTCGT--TT------G--T-AATTACTT-T----ATTCCATAGCTCAGTTTACAACAA-GT-----TCCACCATGGTTTCTTAA--CTGTTTTTTTTTT--AATTA-TATAAACAAT---GTCCATAAGAGTA-TAC---TTTTGACGGTAAC-TTATCAAACAT----TTTCCGTTTAATCAACTTACA-CAATTATGAA-TATGAC-ATTGT-AATATC------------TTGCTGAATTCAAAGGC-T-ATGTTCTAACTCT---AA-AACAGTATTATGCAATATTTGT-A-CAATA--TTAGTTCTA--CATAAAAT-A-TCAGACTTATTATTGCAAACATCAGTTTT----TACCGCATCAC---CTAAAG-CAGGTTGCGT-T-----TC-------------ACAGTTCA----AT-TCAGATGTA--------ACT-------TTGATATTCCAGGTAAGAATAGAGTGGTCTGG
gi|8 : tATGCAATCCCT-TATTAAGC-AAGGGG-TCCCTTGGGTTCAGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGATACATTTAACCCA----GAT-AGA-TGGAACTGTG-CCATTATTAAAACAAACATTAAACAAAACATG-A-AGA--A--ATAAAAC-GGAC-GT-ACCATT---ACACAATACCTCACT-TTGAA-TATT-ATCAATACCACAAGCTTTACC-TCGCTTT-ACATTTTCA---ATGGCTTTTTTTTACTTAAAAAACAG--AGTT-ATTATC--A--TTAAAA------GACAAAT--------GT---------A-----------CAG---TG----T-----T-----AC----TA
gi|8 : tggttgcttATAAAGA--A-----CT--AAATCATC--TTTC---CACTT--GACGAAAAC--ATCTGAAATA------GATGTAG-AAATAGATTCATCAT-----GA-AGTTTA--ACTTCTAAAGGTAT---AC-ATTTAGAT-TTGTACTAGTTTAAACCGATCTTACCGATTGACTTCC-AGAA----CT---TGGACTGATCGACA-T-TACAATCAAT------A---AGTAATTCATTTTGTGAAGAGT--------ACCAATAAAAA-CGTTTCGACTTATGTACCTCACGATCAAGTAAT--TTACGAACTG-GTACA-T--ATTCAGA-T-TTAAG-----ATC-TTT-T---T----T----AACA--TTTCGCTGAGTACACTTAAGTCACCTTCGTTCAGCATT------A--C-TA--ACAT-A----AGTCTATATTTCTG---ACA--AT-CTCTCGGTCCACAGCTGTTCACCAGGTCTACATCTTTTAT--TG-TG-T-----TGAtcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|8 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaACTCTTAACTATACTACACCAATCCTGAT-AA--AC-ACTATCGATATCA---TGT---GTTTG-TAA--T------------CCTCCAACT-TGTCAATAGCAATATT----AACATCAGTAAGCACT---TCTGT------------ATTA-TTTAGAAAATTA-GTT--AAATCAAATTTATCATAAA-TATTA----CTGA-G--TGGTG---T-T-----TCAGTATCA--C--AAC-GCAAC----AT-G----TT-A--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGGatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|9 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagAAC-GGAC-GA-ATCATT---ACACAATACCTCACT-T-GTAATATT-ATCTATACAACAAGCTTTACA-TCGCTTT-GCATTTCCA---ATGCCCTTT-TTTACTTCAAAAACAG--ATAT-ATTATC--A--TTAAAA------GGCAAAT---T---TGC---------A-------------G---TG----T------------------AAC-G------------A-TTACCCGAGAAGTCTAAATGTAAATGTGCCTGGGCAGGTTCA-TTACTAGTATTGTAAAG--TAAAGAACT--AAA--ATCAGCTTTTC--ACTT--GTCCAAAAC--ATCTGAAATA--GAT-GTAGAAACAGA-A---CCCTCAT--T---A-ATTTTA--ACTTCAAAAGGTATACGA--TTAC---ACCTGTACTGGTTTACACCTATCTTACCGACTGACTTCC-AGAA----CT---TTGACTGATTGACATTATA--ATCATT------A---AGTAATTGATTTTGT----A----AAGAGTACCAGTAAAAAATGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTACGAACTT-GTACATT---TTCAAA-T-TTAAG--A--ATTGTTT-TAAA---A-T----TTCGCTTTGT----AAT----CTTAGCTACCTCA-TTCGA--TTGGCAATA--C-TA--ACAT-C----AATCCACATTTCTG---GCA--GT-CTCTCGGTCCTTCACTGTTAATCAGGTCTATATATTTTAT--TGT-G-T-----TGATTAGA-CTG------TA-T---GTTTTAAAGGGTATT-AGGTTATACATATTATTC-TTCTTAACTATACTACACCAATCCTGAT-AA--AC-ACTATCAATATCATGTTGT---GTTTG-TAA--CC-----C-TCGC--TCTAACT-TGTCAATAGCAATTAT----AACATCAGTGA-tga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): ACAACAGGTAAAAATGAACATGTGTTGTTGACACATAATATAAATAAGAAAAACTGTTGGTTTTTTCACTTGTTTAGAATATGTTATTATTATTATTACTACTATTTCCTAAATCATCTACAATTTCCATTAGTATTAATGGTTAGTCTTGAATCCTAACACTTATCTTTCCAATTATTTCCAAAATGTTACATTTTTTTATATATATATTGAATGAAATATCCTTTTGTATTTTTAAC
Unaligned ( gi|20 ): GATTTTTAACATATCTTCATAAAATATTTTCGGCATCGAAAAAAATTAATACAAATAATTGTCTTTATTTTATGACATTTAAA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 1111 22222 22222222 1111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 2222222 111 22222 111111 222 222 2222222222222 11111 1111111 1111111111 1 1111 111111 44444444444444444444444444444444444444 1 333333333 11111111 11 11111 222222222222222 1111 1 444444 33333333333333333 1111 11 11111 33333333333333333333333333333333 22222222222222222222222222222222222 111111111 111 2222222 11 1 22 11 111 11 1111 333333 111 11 11 111 77777777777777 4444444 1 222 333333 1 1 11 1 1 1 11 11 222 6666666666666
lowQualScore : 1 1 4 4 2 4 1 777 777 1 9999 55555 66666 0 1 0 9 3 55555 2 0 9999 33333 3 1 22222222 0 55 3 1 77 9999 3 0 777 4 3 55 4 55 4 0000000000 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 66 66 999 22 777 0 66 22 1111111 1 5555 555 11111 4 444444 0 22 111 44 333 3 11 1 1 22 1 1 4 3333333333333 1 666 66666 1 5555555 11 22 8888 9999999999 4 333 1 0 1 1 0 0 55 1 555 3 7777 1 1 4 4 777777 4 4 22222222222222222222222222222222222222 2 0 1 2 1 777777777 55 55 55 88888888 77 2 8888 88 0 1 1 1 33 1 11 0 55 88 4 11111 888888888888888 5 2 2 1 66 0 0000 1 22 1 1 9999 1 2 3 7 444444 4 11111111111111111 1 6666 1 9999 4 0 2 8 999 2 88 0 4 5 1 1 5 11 1 777 77777 33333333333333333333333333333333 3 99999999999999999999999999999999999 1 1 22 1 22 1 11 1 555555555 6 111 7777777 1 5 1 1 22 6 99 99 3 6 7 1 88 1 1 1 4 1 1 99 1 66 1 66 5 1 33 2 1 1 8 1 3 0 444 8 0 8 0 11 0 7777 1 3 0 0 1 0 3 444444 1 1 6 0 3 0 777777 1 222 3 0 11 0 11 444 8 00000000000000 1 3333333 7 7 7 3 6 7 333 7 888888 0 1 1 1 1 1 0 6 7 0 5 2 6 55 7 7 3 1 0 0 3 6 3 3 88 44 6 0 333 6 3333333333333 3
lowQualScore : . . . . . . . ... ... . .... ..... ..... . . . . . ..... . . .... ..... . . ........ . .. . . .. .... . . ... . . .. . .. . .......... ...................................................................................................................................................... .. .. ... .. ... . .. .. ....... . .... ... ..... . ...... . .. ... .. ... . .. . . .. . . . ............. . ... ..... . ....... .. .. .... .......... . ... . . . . . . .. . ... . .... . . . . ...... . . ...................................... . . . . . ......... .. .. .. ........ .. . .... .. . . . . .. . .. . .. .. . ..... ............... . . . . .. . .... . .. . . .... . . . . ...... . ................. . .... . .... . . . . ... . .. . . . . . . .. . ... ..... ................................ . ................................... . . .. . .. . .. . ......... . ... ....... . . . . .. . .. .. . . . . .. . . . . . . .. . .. . .. . . .. . . . . . . . ... . . . . .. . .... . . . . . . . ...... . . . . . . ...... . ... . . .. . .. ... . .............. . ....... . . . . . . ... . ...... . . . . . . . . . . . . . .. . . . . . . . . . . .. .. . . ... . ............. .
lowQualScore : 1 0 0 0 3 0 0 555 555 0 6666 66666 44444 8 0 5 1 6 55555 3 3 8888 00000 5 8 11111111 1 66 6 0 88 0000 6 8 000 0 7 55 0 55 9 7777777777 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11 11 888 00 666 9 11 77 6666666 0 3333 666 99999 4 444444 7 44 888 33 555 2 66 0 2 66 0 4 0 4444444444444 0 999 44444 2 3333333 99 22 5555 7777777777 0 333 0 7 0 4 6 8 55 0 222 2 1111 0 6 0 0 111111 0 0 88888888888888888888888888888888888888 5 8 4 0 4 999999999 55 44 55 99999999 33 4 0000 77 7 0 0 2 11 4 99 8 55 88 4 11111 222222222222222 0 0 8 4 11 4 6666 8 99 3 9 4444 0 7 3 3 333333 4 66666666666666666 1 0000 7 4444 4 7 4 9 777 6 66 9 5 0 1 0 0 99 1 111 00000 00000000000000000000000000000000 9 88888888888888888888888888888888888 0 0 88 0 00 0 88 7 666666666 3 777 5555555 0 2 0 0 00 7 77 22 5 7 3 7 88 0 0 0 0 7 0 33 9 00 0 44 7 7 66 7 4 4 0 0 8 8 000 0 6 0 8 00 8 0000 4 2 6 8 0 6 2 000000 4 0 0 8 8 6 444444 4 444 2 8 00 8 22 000 0 00000000000000 0 3333333 3 3 3 3 7 3 333 3 333333 7 0 0 0 0 0 7 7 3 0 5 5 7 77 3 3 3 0 7 7 3 7 7 3 33 00 7 7 333 7 3333333333333 7
consensus : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAA--A--ATANAACGGAC-GTATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTTTT-TTTACTTCAAAAACAG--ATAT-ATTATCA--TTAAA-----A-GNCAAAT---T---AGT---------A---------TTC-G---TG----T-----T-----AC----CAAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTTA--ACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCC-AGAATT--CT---TTGACNGATCG-NCATT-TAT-ATCATT------NAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
Reference ( family-173 ) : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAA--A--ATANAACGGA--GTATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTTTT-TTTACTTCAAAAACAG--ATAT-ATTATCA--TTNAA-----A-GNNAAAT---T---AGT---------A---------TTC-G---TG----T-----T-----AC----CAAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTTA--ACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCC-AGAATT--CT---TTGACNGATCG-NCATT-TAT-ATCATT------TAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAAANTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TANAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|1 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGTCGG-AGCTTGACTTAGGTATAGGATTTATCATAATAGATTTACCC-A-TAA-AGATGGAATAAAA-CCTGTATTAAAACAAAAATTAAAAAGAACATGTT-AAA--C--GTATACCGAA--GTATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTATTTAGCATTTTCA---ATAGCTTAT-TTTACTTCTTGAATAG--ATAT-ATGCTCA--TCCAA-----A-ATAAAAC---T---AGT---------A---------TTC-G---TG----T-----T-----AC----CAAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GGATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCATTTTTACTTAAAAC--ATCCTTAACA--TCT-GAAGTGA-AGCTA---CCATCAT--CCAAA-AGT-----ACCTCCATTGGAAT-TGAC-CTTT---TCTTGTTATTATGTATGCCTAGTTTACCAATAGTTTTCC-AGAATT--CT---T---CGGATCA-TTATT-TAT-ATCATT------TAATATTTCATCTTGT----ATTTTAT----ACTAAT-GTTGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTTAT-TTT-TAGATATA-T----ACCA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAT-A----GTTCCATAAATGAG---TCAAAGTATTACTCCACCAAGGCTTTCCAA---CGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACATACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACTAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----TACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTGATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACTAATATT---ATTAC---AAAGGTTGACAGCATCAACAGCACGGACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCGTGATTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGATATAGATGTAAAATCATTGTTTATAA--AA------CCATTAAG-GATAC-ACATATAAGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTAGTCTTTAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGATGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGTATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CGAGAACAGATATGTTATAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTTCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAGAT-ATATATATGTTTGCGATTGTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACACAAAATTATAACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGTGAACCATGTAATGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATTAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGAAATTGACGGTTGTTCTTTAATGAAGACTTATGGGACATTACCT-TAATTTTATCGGCACTATATTTCAACTTAGCGATTACCACACC-GACTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAAACAGAATTAATTTTCAGGCTAT---GTGAAATAAGTGAGTTGA--------T----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|10 : tgatTGTGATACCCCTGT-AAGA-CATAGGGTCACGTGGAT-CATTATTAGCA-GATTTAAGGATAGGGTT-A--ATGATACCCATACCCCA-TTC-TGAGAGAATAATT-CCGGTGTTAAAACAAACATTAAATAGTACATGTA-AAA--ACGAGATAGCTG----TATCATTTTTA-AAAATTTC-TATA-G-GTA-GATC-ATCTATACCGCACGCCTTACCATC-CTTC-GAATTAAAA---ACAGCTTTA-CGTATTTCAAAAATAGTAATATCATTTTCAAATTCAG-----GCACAAAAT---C---ACT---------A---------TT------TA----T-----TGAAGCAG----CAAC-A------------G-GTAA----AA--T------------GTTGTTATG--TGATGACGCATTA----TATAAA--TTA-----GA--AAA--ACT--GTTTTTCCATTT--ATTAAGAAC--ATATTCAGTA--TT-----GTTA---TTA---ATATTTT--CCATATCGTCTACAACTTCCATTGGTAT--AATATTTT---TCTTTTGAAAACCAACACCTATCTTTCCAATACTTTTCC-AAAAAT--TT------ACAGA------ATT-TTT-ATCAATATCTGATAAGAAGTCATTTTGT----ATTTTAA----ACCAAT-ATATTCGTTTAGATTTTTGAACCTCTCTATTAAA-ACC--TTTTCTGCATCGTAAAA---AGTTA-A-TACGAAGAATTTTCT-TTT-GAAAT--A-T----GTTA--T----GAC----ATT----TCAAGTACCCTTT-TTC-----------TG--CAAA--ACAT-ACTTTATTCCATAAATCTG---ACAGATATTCGTTCCACCAAGGTTTACCAATTTTCCTACCTTTAT--Ttgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|11 : gctatG-CACCAA-AATGGTTTGGAAGTTACTGGCCATCAACTGATCTGCTGGGGATTGATCAAGGTGTATGTAGACGTTCTCATACTGTTTGCTAGTCTTCAGT-----TTTGG----C-TT--CTGTATCATGATCGTCGTTGGTCATGAATTTAGCAATTACAACGCCCGGTT----TGCCATCACTGGTAGAGTTCTTGCGCTGAGCACTGGCGCACA-CAACATCACTCACTCGGAGACCGTCGCGT---ATAAGAGAGTTCACCATGTTGC----TGACATTCTCATTTGCATTCTCTGGAAGGCCTCTAAg
gi|12 : ATATATAAAAGG--------CCTTCATTCTGGTATTTATAAATATCTGTTAAAAGAGTACCATAAAAA------GCAGTTACATCAAAAGACCTTGAAGAATTTTCAGGTGGTAAATAACAAACACATGGCAA-----------------CCTTATGATTAAACTTCAACCATAGAAATCCTTCAAACGAGT-TT-T--CTAAAATGGATATATCAAATTCATTAA---ATAAT-T-CGTTCTTGACAAAGAAACCAACTCCACCAGAACCGGCTCTAGCATTTTTATGTA---TAAC-------TTTTCGGTTCAAACCAAACCATGTATAACCTTCTAAGGTCAATTTGT-GT---TCATGAAAT---AGATGAGTTTCTGCTTATG-CTAAAATATCAATATC---AGAATTAAAAACACATAATGATCTTAAATTAAAATTGTC------AGATTCACAGTCAACACTCCAGTCACGGACGTTCCAAAACTCGGCttaatacattaagagggatctcagactgttgatgatgtgggccattggtgacaatagattcaagttttgcactcatttcgttaagttcctctgctacttcaactttgatgggatctttaaaagagtctaacttaagatcaatatccttacggacacgactcatttcagagttgacacgcttgtctaacaattgggcaaatttatttgatattctctactcgaggcttgattcaagtttgtccctgcattccttaacggaagagaacagtatgtgcatgtcagcag
gi|14 : atAATGCAACCCCTCTGT-AAGA-AAGGGGGTCTCTTGGGT-CCGTAACAGATT-ACTTGGGTATTGTGTT-A--ATGATACATTTACCCCA-GGT-ATATGGAACTGTG-CCAT--TTAAA------ATTTAATAAAACATG-A-AGA--A--ATAAAACGGGC-GTATCATT--------ACA---------------------CAATACC-------TCAC------TTT-GCATTTTCA---ATGGCTTCT-TTAACTTCAAAAACAG--AGAT-ATTATCA--TTAAA-----A-GGCAAAT---T---TGT---------G-------------G---TG----T-----T-----Atgacagctaagtacgattactcttacctcggatgttttgccctcagttgttgttgcgacgtccattagtattgttgctataacttagtcccgctctggtccacctaacactac
gi|15 : AGTGCCAGACCTCGAT-ATGA-AAGATGATATCTTACAT-TATCCG-AACCTGACTTAGGAATAGGATT-T--ACGATA---TTATTCTAAGATCATATGCAACT------AATATCAAAACATATGTAAAAAAATATATGTA-AAACAA--GTAGA-CG-----TATGTTTTTTT-AAAACATC-AATT-G-GTA-TGTT-TTCTCCACTAATCGTTTTATC-CTTCTTT-GC
gi|16 : gattatgcaAT-----CC-GTA--G--ATATATTTGC----AT-T----ATCA--------ACA-------TTCATACACCA-AGTAAGAGTTAATGATCCGCAATACCAGTTGGAA-----Cca
gi|17 : caatatccgtgtgggaacgaagactgccatccgtgatgatgtctgcacttgcgttaaaatgtcagggtcgggaacgaatgggtcaggaatgatacgtgcaaaatcgaacacgttttcagttgtttcttatacataagaTTTAGTAGAAATAGATGTATAATCGTTGTT-AGAAC-AATTTCTCCCATTTTA-CATAC-ACAT---------GATAAGAAAATCTGTAAAAAGCTCACCATAATG-ATTTGTTTTAAAATCGATAACATCCCGTTCA-ATA---ATATCACCAACGCCGATAATAAAATCGTCCATT-TCGCCACATCTACTATTGAA--GTCGTCATATATA
gi|18 : TAAAATAAACATTAACATGTACATGTA-AAA--A--AT--GACATA----ATTTTTTTTA-AAAA-ATG-CA---G-ATA--ATTCATCGATACCACATGCCTTACC-ATTTTTC-GAA---TCAAAGACAGCTTTA-CGTATTTC-AAAATAG-----T-AATGTCA--TT----------GTCAAAT---T---
gi|19 : taATGCAATGCTTCTGT-AAGGCAAGCGGG-CTATTTGAT-CTGTAATAGAA-GATTTGGGTATTGGAAT-G--ATTATACACCTACCAAT-AAT-AAATGGAACATTT-CCATTTGAAAAACAAATATTAAACAAACAATGAAGAAA--A--AT-CAACAAG--GTATTAcaggtacaaaaatattatacaa
gi|2 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGGCGG-AGCTTGACTTAGGTATAGGATT-T--ATAATAGATTTACCCCA-TAA-AGATGGAA-TACAACCTTTATTAAAACAAACATTAAAAAGAACATGTA-AAA--A--GTATACCGAA--GTATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTTTTA-GCATTTTCA---ATAGCTTTT-TTTACTTCTAGAATAG--ATAT-ATGCTCA--TCCAA-----A-ATAAAAC---T---AGT---------A---------TTC-G---TG----T-----T-----AC----CAAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GAATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCACTT--ACTTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG---A--ACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCC-AGAATT--CT---TT--CGGATCA-TTATT-TAT-ATCATT------TAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCTAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGTTAA-CAATA--CCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTAATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTCAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T--T-------TTTGCGATTATTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGACCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCATTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTTGCCGTGTTCCAGCTGTGTTGGCTCTGTCTGTTTGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTGTGAAACCGATCCCGTAGAAGCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGATAGCCGTTATCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGATTATTCTTTAATGAAGACTTGGAAGACATTACCT-TACTTTTATCGGCACTAGATTTCAACTTAGCGATTACCACACC-GGCTCTACTGTTATTATTTG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAGACAGAATTAATTTTCAGGCCAT---GTGAAATAAGTGAGTTGACC---TT-CTCATCCAGATTTTCGTTGACACTTTCGGGGAGATTTCTAAc
gi|21 : CAACACGTGTATCAT-TAGTGATAATT-ACCACCGCAGTTGATGGACATGAA-GAT--TTTT
gi|3 : T--ATA--ATC--TTTCTCCCATTT--ACTTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG---A--ACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCC-AGAATT--CT---TT--CGGATCA-TTATT-TAT-ATCATT------TAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATAAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATATTAATACTGAATGATCTGGAATACCTGCTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAACATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCCACGTGACGGAAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGT
gi|4 : AATGCAATCCCTCTTT-AAGA-AAGGGGGTCCCTTGGGT-CCGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGACACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAGCGTG-A-AGA--A--ATAAAATGGACGGT-TCATTACAC-AGAACCTC--ACTTG-GGA-TATT-ATCAATATCACAAGCTTTACC-TCGTTTT-GCATTTTCA---ACGGCTTTT-TTCACTTCAAAAACAG--ATAT-ATTATCA--TTGAA-----A-GACAGATTTAT---AGTGTTACTATCA---------TCC-GAAATG----TCTGAAT-----GC----AAAT-GTATCTGAGC---A-TGTC----CA--TC---AC-TG---GTT-TTATG--AAAT-A-AC----GA------------A-----CT--AAA--GTC--AATTTTCCACTT--GTTCAAAAC--ATCTGAAACA------AAAGTCG-AAATAGAGCCATCAT-----GA-AGTTTA--ACTTCAAAAGGTAT---AC-ATTTAG-TTTTATACTTGTTTACACCGATCTTACCGATAGACTTCC-AGAA----CT---TGGACTGATCA-ACATTACA--ATCATT------AAGTAATTCATTTTTT----AAAGAGA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGGTCAAATAAT--TTACGAACTT-GTACA-T--ATTCAGA-T-TTAAG--ATC-TT-TTC-T-GAC--A-T----TTCG--TTGAGTAC----A-C----TTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----G-TCCACATTTCTG---ATAATCTCTCGGTCCACCACTGTTTACCAGGTCTACATCTTTTAT--T-CTG-T-----TGAT------TAGAC---TG-TATAGTTTTAAAGGGTATT-TGATTATACAT----ATTATTCTTAACTATACTACACCAATCTT---GATAAAC-ACTATCGATATCATGTTGTGTTTA-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATTAGTAAGCACT---TCTGTATTATTTAG-AAATGAGTCTGGTAATTTA-GTT--AAATTAAATTTATCATAAC-TACTACTTTGTAGTGTTTCGTT-----T-----TC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGG-------------TGCAAGAAAATTCAAATCACCTGACCTGTTTATTAAATCAACAGTCCTAACAAC-AGAAAAATCTGTAA--AACAA-GACAA-ATCATCATGAC-CGC-AAATGCAATAATCTACCACTGACAAACCCTTGGTAGAAACAGATGTAAAATCGTTG-TTAGAAC-AATTTCTCCCATTTAACCATGTGACATTTTTGAGTTGA
gi|5 : ttgttAATGCAATCCCTCTAT-AAGA-AAGGGAGTCCTTTGGGT-CCGTAGTAGAA-AACTTGGGTATTGGGTT-A--ATGATACATTAACCCCA-AAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAACATGAA-GAA--A--A-AGAATGGAC-GTATCATT---ACACAATACCTCACTTG-GAA-TATT-ATCAATACCACAAGCTTTAAC-TCGCTTT-GCATTTTAA---ATGGCTTTT-TTTACTTCAAAAACAG--ATAT-ATTATCA--TTAAA-----A-TGCAAAT---TTGCAGT---------ATTACTATCATTC-G---AGAAGTC-----T-----ACATGTCAAT-GTGCC----T---GGTCAT----GT--CC---AT-TA----CTATTAT------T------GTAAA---ATAACG--TA-----CT--AAA--ATC---------AACTT---TTCAAAAC--ATCTGAAATAGATGTAGAAATAA-A---A---CCATCAT-----GA-AGTTTA--ACTTCAAAAGGTAT---AC-ATTTAGAT-TTGTACTGGTTAACACCGATCTTACCGATTGACTTCC-AGAA----CT---TGGACTGATCG-ACATTACA--ATCAAT------AAGCAATTCATTTTGT----AAAAAAA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTTCAAACTT-GTACA-T--ATTCAGA-T-TTAAG-----ATT-TTT-T--------T----AACA--T----TTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----G-TCCATATTTCTG---ACAATCTCTCGGTCCACCATTGTTTACCAGGTCTACATCTTTTATTGTATTGAT-----TAG----------AC---TG-TATAGTTTTTAAGGGTATA-TGGTTATACAT----ATTATTCTTAACTATATTACACTAATCCT---GATAAAC-ACTATCGATATCATGTTGTGTTTG-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATCAG--A-CAGCACTTCTGTATTATTTAGAAAATAA-TCTGGTAATTTA-GTT--AAATCAAATTTATCATAAC-TATTA----CTAA-G--CGGTG---TATAAATATC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATAAAAGTTGGTG-----CAAGATAACTCAAATCAT---CTGAC-----CTGTTTATTAAATCCACAGTCCTAACAAT-TGAAAAATCTGTAA--AAC-GAGACAA-ATCATCATGAC-TGC-AAATGCAATAATCTACCACTGACAAACCCTTATTAGAAATAGATGTATAATCGTTGTTAAAAC--AATTTCTCCCATTTAA-CATAC-ACATATTGGTACTGA
gi|6 : tggctA--ACCGTCATCGGTAT-T-AC-TTTTG--TCCTGTCATTTTTAATTCCGATTTGGCCAATTTCTTTCC-AAAATTGATT---TTGGTTT-TTA-TCATT-TAC-ATTTTC------TA-TATTTCTGCTTGT----ACGTTAA----ACCGGT-AACTACGTTTAGTCCTTTGCACCTATCTCTCAAA--ACGTTTTCTAGCA--GAACAAT--AA----A-T---AAC--TTTATT-TTTCTTCACA-A-TTTT-ATCA--A----TAC----ATT----TTAACCATTCTTT-TTTGG--T------TAAAC-AC--ACAT-T----ATTCCAAA-----G---TCAAATGTTTGCTCAACCATGGATTACCAGGTC---GCCTCTTAT--T-TTG-T-----AAA-------CATGA---TAATATGGGCTTGCAGGGTAGCGTAGCTA-ACAT----TTCCTCTTTAGCTAGGCTACATCAACCAT---TACATGC-ACTATCGTTATCA---T---CTTG-TGT--ACGAAAAC-C-TCCCTCCAAGTCTA-CAATAGACGTGTT----TAC--TGATGA-TAATA--T--ATATCTGACAGAAAGTCA-CGAGGTACATT--TGTA-ACATTAAATCCATCACA-------A----ATAA-ATTCGACT---T-T----------------AGACAGTTGGTAGTATGT----TTTATTATAGTGAAACTTATATTTAATATTCTAGCTTAAAATAGAGTGGTAGGGTAAACCAGATCGAGATAGAAA--ATTGCCTTTATTTT---ATTCC--------TTCACTAGCTCGGTTACTCTGATAATATGAGA---CT-CCGAAAATAATGATAACGTTTTTATGACTTACAAAAT--AATAGTCAACAACCGAAATGCCTTTAACAGACACAGAAGTGAAATC---ATTTAAAATGCATTTCGACCATTTAG-CATAC-ACATATAAGCGTTGATTGAAAAATCAATTAAATCATTCCCA-TACGCATTTTACTTAAAATC--CG-CATTATTATGACCTACTTA-CTCGTCAACACCAAAAATATAATCAG-CGGAATCAACACAGCTACTGTTAAAATATCTACATATATAAATAATACATGTTCCATCATTCTGATGCT------------TTAAAAGAGTTTCAAAATAGTTATGCACATCAACGCTAC--GACTT----GAGTTCTCTGGTGGCAAATAGCG-----GTGGATAAATAACACTA---------TTAT---CAAGTTTTAACCATAAAATACATTTA--GTAGCATTATAACC--AATAGAAATGTCAAA-----TTTAGAACAAAGTAAATTTTGGATTAAAAACCCGACCCCATCAGACCCTGTTCTTGCTCTAATAT
gi|7 : gATACCTCTAT-ATGA-CATAGGATTTCTTGGAT-CTGTGTT-TCCTGACTTTGGTATAGGGCT-C--ATAATGCCTAGGCCCCA-GTC-AATCGGGATCATG-CCAGTATTAAAACACACATTAAATAATATATGTA-AAA--T--AGAAAAAGCA--GTGTAATTTTTA-AGTATTTC-AGAC-G-GTA-GAGT-GTCAAGACCACTGGCATTGTC-GCTCTTA-GCA-CTAAA---ACAGCCTTA-TGTACGTCTTGAAGTG--ATAT-ATAAGAA--TTAAAGCTTGA-TATAAA--------AGC---------G---------TT------TG----T-----A-----AC----TGACGGT-------TTAGA-TT-C-----A--TC---AT-TATC-ACCCTCCTG--G--TTA-GCTGTTACATTATACAGAT-------CTGAAAA--ACA--TGTTTTCCATTT--ATCCAAAACTGATTTTG--TA--TCC----CTTA-AGATA---TCACCATTGTCAGA-AACC----ACTTCTATAGGTAT-TAAT-TTCT---TTTTCTGAAAGGCTATACCAACGTTCCCACTAGATTTCCAAAAAAT--CTGAATTATAAGATTGAACACT-TGA-A------------AGCAGATCATTTTGC----AATTT-A----ACCAAT-AAAGTTGTTTCTCTTTTTGCACTTGTCTGTTAAATGTC--TTTTGAG-AC-G-ACA-TCAACTCATACC-TTAAC--CTTTTC-TTT-CACTTA-C-TTTGGTGCA--T----TG-----AAT----ATA--TAA--TTT-TTCGT--T------TG--T-AATTACTT-T----ATTCCATAGCTCAGTTTACAA---CAAGTTCCACCATGGTTTCTTAA--CTGTTTTTTTTTT--AATTA-TATAAACAAT---GTCCATAAGAGTA-TAC---TTTTGACGGTAAC-TTATCAAACAT----TTTCCGTTTAATCAACTTACA-CAATTATGAATATGA-C-ATTGT-AATATC---------TTGCTGAATTCAAAGGC-T-ATGTTCTAACTCT---AA-AACAGTATTATGCAATATTTGT-A-CAATA--TTAGTTCTA--CATAAAAT-A-TCAGACTTATTATTGCAAACATCAGTTTT----TACCGCATCAC---CTAAAG-CAGGTTGCGT-T-----TC-----------ACAGTTCA----AT-TCAGATGTA--------ACT-------TTGATATTCCAGGTAAGAATAGAGTGGTCTGG
gi|8 : tATGCAATCCCT-TATTAAGC-AAGGGG-TCCCTTGGGTTCAGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGATACATTTAACCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAACAAAACATG-A-AGA--A--ATAAAACGGAC-GTACCATT---ACACAATACCTCACT-TTGAA-TATT-ATCAATACCACAAGCTTTACC-TCGCTTT-ACATTTTCA---ATGGCTTTTTTTTACTTAAAAAACAG--AGTT-ATTATCA--TTAAA-----A-GACAAAT--------GT---------A-----------CAG---TG----T-----T-----AC----TA
gi|8 : tggttgcttATAAAGA--A-----CT--AAATCATC--TTTC---CACTT--GACGAAAAC--ATCTGAAATA------GATGTAG-AAATAGATTCATCAT-----GA-AGTTTA--ACTTCTAAAGGTAT---AC-ATTTAGAT-TTGTACTAGTTTAAACCGATCTTACCGATTGACTTCC-AGAA----CT---TGGACTGATCG-ACATTACA--ATCAAT------AAGTAATTCATTTTGTGAAGAGT--------ACCAAT-AAAAACGTTTCGACTTATGTACCTCACGATCAAGTAAT--TTACGAACTG-GTACA-T--ATTCAGA-T-TTAAG-----ATC-TTT-T---T----T----AACA--T----TTCGCTGAGTACACTTAAGTCACCTTCGTTCAGCAT------TA--C-TA--ACAT-A----AGTCTATATTTCTG---ACAATCTCTCGGTCCACAGCTGTTCACCAGGTCTACATCTTTTAT--TG-TG-T-----TGAtcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|8 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaACTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCGATATCA---TGTGTTTG-TAA--T------------CCTCCAACT-TGTCAATAGCAATATT----AACATCAGTAAGCACT---TCTGT------------ATTA-TTTAGAAAATTA-GTT--AAATCAAATTTATCATAAA-TATTA----CTGA-GT--GGTG---T-T-----TCAGTATCA--CAAC-GCAAC----AT-G----TT-A--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGGatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|9 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagAACGGAC-GAATCATT---ACACAATACCTCACT-T-GTAATATT-ATCTATACAACAAGCTTTACA-TCGCTTT-GCATTTCCA---ATGCCCTTT-TTTACTTCAAAAACAG--ATAT-ATTATCA--TTAAA-----A-GGCAAAT---T---TGC---------A-------------G---TG----T------------------AAC-G------------A-TTACCCGAGAAGTCTAAATGTAAATGTGCCTGGGCAGGTTCA-TTACTAGTATTGTAAAG--TAAAGAACT--AAA--ATCAGCTTTTC--ACTT--GTCCAAAAC--ATCTGAAATA--GAT-GTAGAAACAGA-A---CCCTCAT--T---A-ATTTTA--ACTTCAAAAGGTATACGA--TTAC---ACCTGTACTGGTTTACACCTATCTTACCGACTGACTTCC-AGAA----CT---TTGACTGATTG-ACA-T-TATAATCATT------AAGTAATTGATTTTGT----A----AAGAGTACCAGTAAAAAATGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTACGAACTT-GTACATT---TTCAAA-T-TTAAG----AATTGTTT-TAA--A-A-T----TTCGCTT----TGT----AAT----CTTAGCTACCTCA-TTCGA--TTGGCAATA--C-TA--ACAT-C----AATCCACATTTCTG---GCAGTCTCTCGGTCCTTCACTGTTAATCAGGTCTATATATTTTAT--TG-TG-T-----TGATTAGA-CTG------TA-T---GTTTTAAAGGGTATT-AGGTTATACATATTATTC-TTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCAATATCATGTTGTGTTTG-TAA--CC-----C-TCGC--TCTAACT-TGTCAATAGCAATTAT----AACATCAGTGA-GCACG--TTTGTATTATCTAGAAAtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): ACAACAGGTAAAAATGAACATGTGTTGTTGACACATAATATAAATAAGAAAAACTGTTGGTTTTTTCACTTGTTTAGAATATGTTATTATTATTATTACTACTATTTCCTAAATCATCTACAATTTCCATTAGTATTAATGGTTAGTCTTGAATCCTAACACTTATCTTTCCAATTATTTCCAAAATGTTACATTTTTTTATATATATATTGAATGAAATATCCTTTTGTATTTTTAAC
Unaligned ( gi|20 ): GATTTTTAACATATCTTCATAAAATATTTTCGGCATCGAAAAAAATTAATACAAATAATTGTCTTTATTTTATGACATTTAAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 22222 22222222 222222222222222 11111 11111111 22222222222 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 11111 111 22222 111111 222 222 2222222222222 11 11111111 1111111111 1 1111 111111 44444444444444444444444444444444444444 1 333333333 11111111 11 11111 222222222222222 1111 1 444444 33333333333333333 1111 11 11111 33333333333333333333333333333333 22222222222222222222222222222222222 111111111 111 2222222 11 1 22 11 111 11 1111 5555555 111 11 11 111 77777777777777 4444444 1 222 333333 1 1 11 1 1 1 11 11 222 6666666666666
lowQualScore : 1 1 4 4 2 4 1 777 777 1 9999 55555 66666 0 1 0 9 3 55 999 1 5 3 33333 3 1 22222222 0 55 3 1 77 9999 3 0 777 777 555555555555555 4 22222 0 44444444 00000000000 1 777 8888888 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 66 66 7777 0 777 0 66 22 66 55555 1 5555 555 11111 4 444444 0 22 111 44 333 3 11 1 1 22 1 1 4 3333333333333 1 666 7 4 55 44444444 2 0 1 8888 9999999999 4 333 1 0 1 1 0 0 55 1 555 3 7777 1 1 4 4 777777 4 4 22222222222222222222222222222222222222 2 0 1 2 1 777777777 55 55 55 88888888 77 2 8888 88 0 1 1 1 33 1 11 0 55 88 4 11111 888888888888888 5 2 2 1 66 0 0000 1 22 1 1 9999 1 2 3 7 444444 4 11111111111111111 1 6666 1 9999 4 0 2 8 999 2 88 0 4 5 1 1 5 11 1 777 77777 33333333333333333333333333333333 3 99999999999999999999999999999999999 1 1 22 1 22 1 11 1 555555555 6 111 7777777 1 5 1 1 22 6 99 99 3 6 7 1 88 1 1 1 4 1 1 99 1 66 1 66 5 1 33 2 1 1 8 1 3 0 444 8 0 8 0 11 0 7777 1 3 0 0 1 0 3 1111111 1 1 6 0 3 0 777777 1 222 3 0 11 0 11 444 8 00000000000000 1 3333333 7 7 7 3 6 7 333 7 888888 0 1 1 1 1 1 0 6 7 0 5 2 6 55 7 7 3 1 0 0 3 6 3 3 88 44 6 0 333 6 3333333333333 3
lowQualScore : . . . . . . . ... ... . .... ..... ..... . . . . . .. ... . . . ..... . . ........ . .. . . .. .... . . ... ... ............... . ..... . ........ ........... . ... ....... ............................................................................................................................................... .. .. .... . ... . .. .. .. ..... . .... ... ..... . ...... . .. ... .. ... . .. . . .. . . . ............. . ... . . .. ........ . . . .... .......... . ... . . . . . . .. . ... . .... . . . . ...... . . ...................................... . . . . . ......... .. .. .. ........ .. . .... .. . . . . .. . .. . .. .. . ..... ............... . . . . .. . .... . .. . . .... . . . . ...... . ................. . .... . .... . . . . ... . .. . . . . . . .. . ... ..... ................................ . ................................... . . .. . .. . .. . ......... . ... ....... . . . . .. . .. .. . . . . .. . . . . . . .. . .. . .. . . .. . . . . . . . ... . . . . .. . .... . . . . . . . ....... . . . . . . ...... . ... . . .. . .. ... . .............. . ....... . . . . . . ... . ...... . . . . . . . . . . . . . .. . . . . . . . . . . .. .. . . ... . ............. .
lowQualScore : 1 0 0 0 3 0 0 555 555 0 6666 66666 44444 8 0 5 1 6 00 999 8 9 3 00000 5 8 11111111 1 66 6 0 88 0000 6 8 000 000 000000000000000 0 22222 8 55555555 00000000000 0 000 9999999 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 11 11 1111 9 666 9 11 77 11 44444 0 3333 666 99999 4 444444 7 44 888 33 555 2 66 0 2 66 0 4 0 4444444444444 0 999 2 0 00 11111111 4 5 0 5555 7777777777 0 333 0 7 0 4 6 8 55 0 222 2 1111 0 6 0 0 111111 0 0 88888888888888888888888888888888888888 5 8 4 0 4 999999999 55 44 55 99999999 33 4 0000 11 7 0 0 2 11 4 99 8 55 88 4 11111 222222222222222 0 0 8 4 11 4 6666 8 99 3 9 4444 3 7 3 3 333333 4 66666666666666666 1 0000 7 4444 4 7 4 9 777 6 66 9 5 0 1 0 0 99 1 111 00000 00000000000000000000000000000000 9 88888888888888888888888888888888888 0 0 88 0 00 0 88 7 666666666 3 777 5555555 0 2 0 0 00 7 77 22 5 7 3 7 88 0 0 0 0 7 0 33 9 00 0 44 7 7 66 7 4 4 0 0 8 8 000 0 6 0 8 00 8 0000 4 2 6 8 0 6 2 4444444 4 0 0 8 8 6 444444 4 444 2 8 00 8 22 000 0 00000000000000 0 3333333 3 3 3 3 7 3 333 3 333333 7 0 0 0 0 0 7 7 3 0 5 5 7 77 3 3 3 0 7 7 3 7 7 3 33 00 7 7 333 7 3333333333333 7
consensus : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNCA---AAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAAC--ATCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTTA--ACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCC-AGAATT--CT---TTGACNGATCG-NCATT-TAT-ATCA-----T--TNAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
Reference ( family-173 ) : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNCA---AAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAAC--ATCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTTA--ACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCC-AGAATT--CT---TTGACNGATCG-NCATT-TAT-ATCA-----T--TNAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T-----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|1 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGTCGG-AGCTTGACTTAGGTATAGGATTTATCATAATAGATTTACCC-A-TAA-AGATGGAATAAAA-CCTGTATTAAAACAAAAATTAAAAAGAACATGTT-AAAC--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTATTTAGCATTTTCA---ATAGCTT---ATT---------------TTACT-TCT----TGAATAGATATAT--------GCTCATC---CAA-----AATAA---AAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GGATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCATTTTTACTTAAAAC--ATCCTTAAC--ATCT-GAAGTGA-AGCTA---CCATCAT--CCAAA-AGT-----ACCTCCATTGGAAT-TGAC-CTTT---TCTTGTTATTATGTATGCCTAGTTTACCAATAGTTTTCC-AGAATT--CT---T---CGGATCA-TTATT-TAT-ATCA-----T--TTAATATTTCATCTTGT----ATTTTAT----ACTAAT-GTTGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTTAT-TTT-TAGATATA-T----ACCA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAT-A----GTTCCATAAATGAG---TCAAAGTATTACTCCACCAAGGCTTTCCAA---CGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACATACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACTAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----TACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTGATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACTAATATT---ATTAC---AAAGGTTGACAGCATCAACAGCACGGACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCGTGATTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGATATAGATGTAAAATCATTGTTTATAA--AA------CCATTAAG-GATAC-ACATATAAGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTAGTCTTTAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGATGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGTATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CGAGAACAGATATGTTATAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTTCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAGAT-ATATATATGTTTGCGATTGTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACACAAAATTATAACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGTGAACCATGTAATGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATTAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGAAATTGACGGTTGTTCTTTAATGAAGACTTATGGGACATTACCT-TAATTTTATCGGCACTATATTTCAACTTAGCGATTACCACACC-GACTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAAACAGAATTAATTTTCAGGCTAT---GTGAAATAAGTGAGTTGA--------T----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|10 : tgatTGTGATACCCCTGT-AAGA-CATAGGGTCACGTGGAT-CATTATTAGCA-GATTTAAGGATAGGGTT-A--ATGATACCCATACCCCA-TTC-TGAGAGAATAATT-CCGGTGTTAAAACAAACATTAAATAGTACATGTA-AAAACGAGATAGC---TGT-ATCATTTTTA-AAAATTTC-TATA-G-GTA-GATC-ATCTATACCGCACGCCTTACCATC-CTTC-GAATTAAAA---ACAGCTT---TAC---------------GTATT-TCA----AAAATAG---TAA--------TATCATTTTCAAATTC--AGGCACAAAAT---C---ACT---------A---------TT-----TA----T-----TGAAGCAG----C----AAC-A------------G-GTAA----AA--T------------GTTGTTATG--TGATGACGCATTA----TATAAA--TTA-----GA--AAA--ACT--GTTTTTCCATTT--ATTAAGAAC--ATATTCAGT--ATT-----GTTA---TTA---ATATTTT--CCATATCGTCTACAACTTCCATTGGTAT--AATATTTT---TCTTTTGAAAACCAACACCTATCTTTCCAATACTTTTCC-AAAAAT--TT------ACAGA------ATT-TTT-ATCAATATCTGATAAGAAGT-CATTTTGT----ATTTTAA----ACCAAT-ATATTCGTTTAGATTTTTGAACCTCTCTATTAAA-ACC--TTTTCTGCATCGTAAAA---AGTTA-A-TACGAAGAATTTTCT-TTT-GAAAT--A-T----GTTA--T----GAC----ATT----TCAAGTACCCTTT-TTC-----------TG--CAAA--ACAT-ACTTTATTCCATAAATCTG---ACAGATATTCGTTCCACCAAGGTTTACCAATTTTCCTACCTTTAT--Ttgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|11 : gctatG-CACCAA-AATGGTTTGGAAGTTACTGGCCATCAACTGATCTGCTGGGGATTGATCAAGGTGTATGTAGACGTTCTCATACTGTTTGCTAGTCTTCAGT-----TTTGG----C-TT--CTGTATCATGATCGTCGTTGGTCATGAATTTAGCAATTACAACGCCCGGTT----TGCCATCACTGGTAGAGTTCTTGCGCTGAGCACTGGCGCACA-CAACATCACTCACTCGGAGACCGTCGCGT---ATAAGAGAGTTCACCATGTTGC----TGACATTCTCATTTGCATTCTCTGGAAGGCCTCTAAg
gi|12 : ATATATAAAAGG--------CCTTCATTCTGGTATTTATAAATATCTGTTAAAAGAGTACCATAAAAA------GCAGTTACATCAAAAGAC-CTTGAAGAATTTTCAGGTGGTAAATAACAAACACATGGCAA-----------------CCTTATGATTAAACTTCAACCATAGAAATCCTTCAAACGAGT-TT-T--CTAAAATGGATATATCAAATTCATTAA---ATAAT-T-CGTTCTTGACAAAGAAACCAACTCCACCAGAACCGGCTCTAGCATTTTTATGTA---TAAC-------TTTTCGGTTCAAACCAAACCATGTATAACCTTCTAAGGTCAATTTGT-GT---TCATGAAAT---AGATGAGTTTCTGCTTATG-CTAAAATATCAATATC---AGAATTAAAAACACATAATGATCTTAAATTAAAATTGTC------AGATTCACAGTCAACACTCCAGTCACGGACGTTCCAAAACTCGGCttaatacattaagagggatctcagactgttgatgatgtgggccattggtgacaatagattcaagttttgcactcatttcgttaagttcctctgctacttcaactttgatgggatctttaaaagagtctaacttaagatcaatatccttacggacacgactcatttcagagttgacacgcttgtctaacaattgggcaaatttatttgatattctctactcgaggcttgattcaagtttgtccctgcattccttaacggaagagaacagtatgtgcatgtcagcag
gi|14 : atAATGCAACCCCTCTGT-AAGA-AAGGGGGTCTCTTGGGT-CCGTAACAGATT-ACTTGGGTATTGTGTT-A--ATGATACATTTACCCCA-GGT-ATATGGAACTGTG-CCAT--TTAAA------ATTTAATAAAACATG-A-AGAA--ATAAAACGGGCGT-ATCATT--------ACA---------------------CAATACC-------TCAC------TTT-GCATTTTCA---ATGGCTT---CTT---------------TAACT-TCA----AAAACAGAGATAT--------TATCATT---AAA-----AGGCA---AAT---T---TGT---------G------------G---TG----T-----T-----Atgacagctaagtacgattactcttacctcggatgttttgccctcagttgttgttgcgacgtccattagtattgttgctataacttagtcccgctctggtccacctaacactac
gi|15 : AGTGCCAGACCTCGAT-ATGA-AAGATGATATCTTACAT-TATCCG-AACCTGACTTAGGAATAGGATT-T--ACGATA---TTATTCTAAGATCATATGCAACT------AATATCAAAACATATGTAAAAAAATATATGTA-AAAC--A---AGTAGACGT-ATGTTTTTTT-AAAACATC-AATT-G-GTA-TGTT-TTCTCCACTAATCGTTTTATC-CTTCTTT-GC
gi|16 : gattatgcaAT-----CC-GTA--G--ATATATTTGC----AT-T----ATCA--------ACA-------TTCATACACCA-AGTAAGAGTTAATGATCCGCAATACCAGTTGGAA-----Cca
gi|17 : caatatccgtgtgggaacgaagactgccatccgtgatgatgtctgcacttgcgttaaaatgtcagggtcgggaacgaatgggtcaggaatgatacgtgcaaaatcgaacacgttttcagttgtttcttatacataagaTTTAGTAGAAATAGATGTATAATCGTTGTT-AGAAC-AATTTCTCCCATTTTA-CATAC-ACAT---------GATAAGAAAATCTGTAAAAAGCTCACCATAATG-ATTTGTTTTAAAATCGATAACATCCCGTTCA-ATA---ATATCACCAACGCCGATAATAAAATCGTCCATT-TCGCCACATCTACTATTGAA--GTCGTCATATATA
gi|18 : TAAAATAAACATTAACATGTACATGTA-AAAA--AT------GACATAATTTTTTTTA-AAAA-ATG-CA---G-ATA--ATTCATCGATACCACATGCCTTACC-ATTTTTC-GAA---TCAAAGACAGCTT---TAC---------------GTATT-TC-----AAAATAG---TAA--------TGTCATT------------GTCA---AAT---T---
gi|19 : taATGCAATGCTTCTGT-AAGGCAAGCGGG-CTATTTGAT-CTGTAATAGAA-GATTTGGGTATTGGAAT-G--ATTATACACCTACCAAT-AAT-AAATGGAACATTT-CCATTTGAAAAACAAATATTAAACAAACAATGAAGAAAA--AT-CAAC-AAGGT-ATTAcaggtacaaaaatattatacaa
gi|2 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGGCGG-AGCTTGACTTAGGTATAGGATT-T--ATAATAGATTTACCCCA-TAA-AGATGGAA-TACAACCTTTATTAAAACAAACATTAAAAAGAACATGTA-AAAA--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTTTTA-GCATTTTCA---ATAGCTT---TTT---------------TTACT-TCT----AGAATAGATATAT--------GCTCATC---CAA-----AATAA---AAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GAATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCACTT--ACTTAAAAC--ATCCTTAAC--ATCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG---A--ACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCC-AGAATT--CT---TT--CGGATCA-TTATT-TAT-ATCA-----T--TTAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCTAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGTTAA-CAATA--CCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTAATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTCAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T--T-------TTTGCGATTATTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGACCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCATTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTTGCCGTGTTCCAGCTGTGTTGGCTCTGTCTGTTTGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTGTGAAACCGATCCCGTAGAAGCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGATAGCCGTTATCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGATTATTCTTTAATGAAGACTTGGAAGACATTACCT-TACTTTTATCGGCACTAGATTTCAACTTAGCGATTACCACACC-GGCTCTACTGTTATTATTTG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAGACAGAATTAATTTTCAGGCCAT---GTGAAATAAGTGAGTTGACC---TT-CTCATCCAGATTTTCGTTGACACTTTCGGGGAGATTTCTAAc
gi|21 : CAACACGTGTATCAT-TAGTGATAATT-ACCACCGCAGTTGATGGACATGAA-GAT--TTTT
gi|3 : T--ATA--ATC--TTTCTCCCATTT--ACTTAAAAC--ATCCTTAAC--ATCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG---A--ACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCC-AGAATT--CT---TT--CGGATCA-TTATT-TAT-ATCA-----T--TTAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATAAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATATTAATACTGAATGATCTGGAATACCTGCTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAACATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCCACGTGACGGAAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGT
gi|4 : AATGCAATCCCTCTTT-AAGA-AAGGGGGTCCCTTGGGT-CCGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGACACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAGCGTG-A-AGAA--ATAAAATGGACGG-TTCATTACAC-AGAACCTC--ACTTG-GGA-TATT-ATCAATATCACAAGCTTTACC-TCGTTTT-GCATTTTCA---ACGGCTT---TTT---------------TCACT-TCA----AAAACAGATATAT--------TATCATT---GAA-----AGACA---GATTTAT---AGTGTTACTATCA---------TCCGAAATG----TCTGAAT-----GC----A----AAT-GTATCTGAGC---A-TGTC----CA--TC---AC-TG---GTT-TTATG--AAAT-A-AC----GA------------A-----CT--AAA--GTC--AATTTTCCACTT--GTTCAAAAC--ATCTGAAAC--A----AAAGTCG-AAATAGAGCCATCAT-----GA-AGTTTA--ACTTCAAAAGGTAT---AC-ATTTAG-TTTTATACTTGTTTACACCGATCTTACCGATAGACTTCC-AGAA----CT---TGGACTGATCA-ACATTACA--ATCA-----T--TAAGTAATTCATTTTTT----AAAGAGA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGGTCAAATAAT--TTACGAACTT-GTACA-T--ATTCAGA-T-TTAAG--ATC-TT-TTC-T-GAC--A-T----TTCG--TTGAGTAC----A-C----TTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----G-TCCACATTTCTG---ATAATCTCTCGGTCCACCACTGTTTACCAGGTCTACATCTTTTAT--T-CTG-T-----TGAT------TAGAC---TG-TATAGTTTTAAAGGGTATT-TGATTATACAT----ATTATTCTTAACTATACTACACCAATCTT---GATAAAC-ACTATCGATATCATGTTGTGTTTA-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATTAGTAAGCACT---TCTGTATTATTTAG-AAATGAGTCTGGTAATTTA-GTT--AAATTAAATTTATCATAAC-TACTACTTTGTAGTGTTTCGTT-----T-----TC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGG-------------TGCAAGAAAATTCAAATCACCTGACCTGTTTATTAAATCAACAGTCCTAACAAC-AGAAAAATCTGTAA--AACAA-GACAA-ATCATCATGAC-CGC-AAATGCAATAATCTACCACTGACAAACCCTTGGTAGAAACAGATGTAAAATCGTTG-TTAGAAC-AATTTCTCCCATTTAACCATGTGACATTTTTGAGTTGA
gi|5 : ttgttAATGCAATCCCTCTAT-AAGA-AAGGGAGTCCTTTGGGT-CCGTAGTAGAA-AACTTGGGTATTGGGTT-A--ATGATACATTAACCCCA-AAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAACATGAA-GAAA--A-AGAATGGACGT-ATCATT---ACACAATACCTCACTTG-GAA-TATT-ATCAATACCACAAGCTTTAAC-TCGCTTT-GCATTTTAA---ATGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----ATGCA---AAT---TTGCAGT---------ATTACTATCATTCG---AGAAGTC-----T-----ACATGTC----AAT-GTGCC----T---GGTCAT----GT--CC---AT-TA----CTATTAT------T------GTAAA---ATAACG--TA-----CT--AAA--AT---------CAACTT---TTCAAAAC--ATCTGAAATAGATGTAGAAATAA-A---A---CCATCAT-----GA-AGTTTA--ACTTCAAAAGGTAT---AC-ATTTAGAT-TTGTACTGGTTAACACCGATCTTACCGATTGACTTCC-AGAA----CT---TGGACTGATCG-ACA-T-TACAATCA-----A--TAAGCAATTCATTTTGT----AAAAAAA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTTCAAACTT-GTACA-T--ATTCAGA-T-TTAAG-----ATT-TTT-T--------T----AACA--T----TTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----G-TCCATATTTCTG---ACAATCTCTCGGTCCACCATTGTTTACCAGGTCTACATCTTTTATTGTATTGAT-----TAG----------AC---TG-TATAGTTTTTAAGGGTATA-TGGTTATACAT----ATTATTCTTAACTATATTACACTAATCCT---GATAAAC-ACTATCGATATCATGTTGTGTTTG-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATCAG--A-CAGCACTTCTGTATTATTTAGAAAATAA-TCTGGTAATTTA-GTT--AAATCAAATTTATCATAAC-TATTA----CTAA-G--CGGTG---TATAAATATC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATAAAAGTTGGTG-----CAAGATAACTCAAATCAT---CTGAC-----CTGTTTATTAAATCCACAGTCCTAACAAT-TGAAAAATCTGTAA--AAC-GAGACAA-ATCATCATGAC-TGC-AAATGCAATAATCTACCACTGACAAACCCTTATTAGAAATAGATGTATAATCGTTGTTAAAAC--AATTTCTCCCATTTAA-CATAC-ACATATTGGTACTGA
gi|6 : tggctA--ACCGTCATCGGTAT-T-AC-TTTTG--TCCTGTCATTTTTAATTCCGATTTGGCCAATTTCTTTCC-AAAATTGATT---TTGGTTT-TTA-TCATT-TAC-ATTT-----T--CTA-TATTTCTGCTTGT----ACGTTAA----ACCGGT-AACTACGTTTAGTCCTTTGCACCTATCTCTCAAA--ACGTTTTCTAGCA--GAACAAT--AA----A-T---AAC--TTTATT-TTTCTTCACA-A-TTTT-ATCA--A----TAC----ATT----TTAACCATTCTTT-TTTGG--T------TAAAC-AC--ACAT-T----ATTCCAAA-----G---TCAAATGTTTGCTCAACCATGGATTACCAGGTC---GCCTCTTAT--T-TTG-T-----AAA-------CATGA---TAATATGGGCTTGCAGGGTAGCGTAGCTA-ACAT----TTCCTCTTTAGCTAGGCTACATCAACCAT---TACATGC-ACTATCGTTATCA---T---CTTG-TGT--ACGAAAAC-C-TCCCTCCAAGTCTA-CAATAGACGTGTT----TAC--TGATGA-TAATA--T--ATATCTGACAGAAAGTCA-CGAGGTACATT--TGTA-ACATTAAATCCATCACA-------A----ATAA-ATTCGACT---T-T----------------AGACAGTTGGTAGTATGT----TTTATTATAGTGAAACTTATATTTAATATTCTAGCTTAAAATAGAGTGGTAGGGTAAACCAGATCGAGATAGAAA--ATTGCCTTTATTTT---ATTCC--------TTCACTAGCTCGGTTACTCTGATAATATGAGA---CT-CCGAAAATAATGATAACGTTTTTATGACTTACAAAAT--AATAGTCAACAACCGAAATGCCTTTAACAGACACAGAAGTGAAATC---ATTTAAAATGCATTTCGACCATTTAG-CATAC-ACATATAAGCGTTGATTGAAAAATCAATTAAATCATTCCCA-TACGCATTTTACTTAAAATC--CG-CATTATTATGACCTACTTA-CTCGTCAACACCAAAAATATAATCAG-CGGAATCAACACAGCTACTGTTAAAATATCTACATATATAAATAATACATGTTCCATCATTCTGATGCT------------TTAAAAGAGTTTCAAAATAGTTATGCACATCAACGCTAC--GACTT-----GAGTTCTCTGGTGGCAAATAGCG-----GTGGATAAATAACACTA---------TTAT---CAAGTTTTAACCATAAAATACATTTA--GTAGCATTATAACC--AATAGAAATGTCAAA-----TTTAGAACAAAGTAAATTTTGGATTAAAAACCCGACCCCATCAGACCCTGTTCTTGCTCTAATAT
gi|7 : gATACCTCTAT-ATGA-CATAGGATTTCTTGGAT-CTGTGTT-TCCTGACTTTGGTATAGGGCT-C--ATAATGCCTAGGCCCCA-GTC-AATCGGGATCATG-CCAGTATTAAAACACACATTAAATAATATATGTA-AAAT--AGAAAAAGCA-GT-GTAATTTTTA-AGTATTTC-AGAC-G-GTA-GAGT-GTCAAGACCACTGGCATTGTC-GCTCTTA-GCA-CTAAA---ACAGCCT---TAT---------------GTACG-TCT----TGAAGTGATATAT--------AAGAATT---AAAGCTTGATATA---AA--------AGC---------G---------TT-----TG----T-----A-----AC----T----GACGGT-------TTAGA-TT-C-----A--TC---AT-TATC-ACCCTCCTG--G--TTA-GCTGTTACATTATACAGAT-------CTGAAAA--ACA--TGTTTTCCATTT--ATCCAAAACTGATTTTG--T--ATCC----CTTA-AGATA---TCACCATTGTCAGA-AACC----ACTTCTATAGGTAT-TAAT-TTCT---TTTTCTGAAAGGCTATACCAACGTTCCCACTAGATTTCCAAAAAAT--CTGAATTATAAGATTGAACACT-TGA-A-------------AGCAGATCATTTTGC----AATTT-A----ACCAAT-AAAGTTGTTTCTCTTTTTGCACTTGTCTGTTAAATGTC--TTTTGAG-AC-G-ACA-TCAACTCATACC-TTAAC--CTTTTC-TTT-CACTTA-C-TTTGGTGCA--T----TG-----AAT----ATA--TAA--TTT-TTCGT--T------TG--T-AATTACTT-T----ATTCCATAGCTCAGTTTACAA---CAAGTTCCACCATGGTTTCTTAA--CTGTTTTTTTTTT--AATTA-TATAAACAAT---GTCCATAAGAGTA-TAC---TTTTGACGGTAAC-TTATCAAACAT----TTTCCGTTTAATCAACTTACA-CAATTATGAATATGA-C-ATTGT-AATATC---------TTGCTGAATTCAAAGGC-T-ATGTTCTAACTCT---AA-AACAGTATTATGCAATATTTGT-A-CAATA--TTAGTTCTA--CATAAAAT-A-TCAGACTTATTATTGCAAACATCAGTTTT----TACCGCATCAC---CTAAAG-CAGGTTGCGT-T-----TC-----------ACAGTTCA----AT-TCAGATGTA--------ACT-------TTGATATTCCAGGTAAGAATAGAGTGGTCTGG
gi|8 : tATGCAATCCCT-TATTAAGC-AAGGGG-TCCCTTGGGTTCAGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGATACATTTAACCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAACAAAACATG-A-AGAA--ATAAAACGGACGT-ACCATT---ACACAATACCTCACT-TTGAA-TATT-ATCAATACCACAAGCTTTACC-TCGCTTT-ACATTTTCA---ATGGCTTTTTTTTACTTAAAAAACAGAGTTATTATCATTAAAAGACAAATGTACAGTGTTACTATCATCCG-AGA-----AGTCT-----T---T---AAT---------G---------TAAA---TG----T-----------GC----CTGGTAAC-GT-------TC--A-TTAC----TA--TT---AT-T-------------------------GTAAA---ATAAAGA--A-----CT--AAATCATC--TTTC---CACTT--GACGAAAAC--ATCTGAAAT--A----GATGTAG-AAATAGATTCATCAT-----GA-AGTTTA--ACTTCTAAAGGTAT---AC-ATTTAGAT-TTGTACTAGTTTAAACCGATCTTACCGATTGACTTCC-AGAA----CT---TGGACTGATCG-ACA-T-TACAATCA-----A--TAAGTAATTCATTTTGTGAAGAGT--------ACCAAT-AAAAACGTTTCGACTTATGTACCTCACGATCAAGTAAT--TTACGAACTG-GTACA-T--ATTCAGA-T-TTAAG-----ATC-TTT-T---T----T----AACA--T----TTCGCTGAGTACACTTAAGTCACCTTCGTTCAGCAT------TA--C-TA--ACAT-A----AGTCTATATTTCTG---ACAATCTCTCGGTCCACAGCTGTTCACCAGGTCTACATCTTTTAT--TG-TG-T-----TGA
gi|8 : tggttgcttACTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCGATATCA---TGTGTTTG-TAA--T------------CCTCCAACT-TGTCAATAGCAATATT----AACATCAGTAAGCACT---TCTGT------------ATTA-TTTAGAAAATTA-GTT--AAATCAAATTTATCATAAA-TATTA----CTGA-GT--GGTG---T-T-----TCAGTATCA--CAAC-GCAAC----AT-G----TT-A--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGGatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|9 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagAACGGACGA-ATCATT---ACACAATACCTCACT-T-GTAATATT-ATCTATACAACAAGCTTTACA-TCGCTTT-GCATTTCCA---ATGCCCT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGGCA---AAT---T---TGC---------A------------G---TG----T----------------------AAC-G------------A-TTACCCGAGAAGTCTAAATGTAAATGTGCCTGGGCAGGTTCA-TTACTAGTATTGTAAAG--TAAAGAACT--AAA--ATCAGCTTTTC--ACTT--GTCCAAAAC--ATCTGAAAT--AGAT-GTAGAAACAGA-A---CCCTCAT--T---A-ATTTTA--ACTTCAAAAGGTATACGA--TTAC---ACCTGTACTGGTTTACACCTATCTTACCGACTGACTTCC-AGAA----CT---TTGACTGATTG-ACA-T-TATAATCA-----T--TAAGTAATTGATTTTGT----A----AAGAGTACCAGTAAAAAATGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTACGAACTT-GTACATT---TTCAAA-T-TTAAG----AATTGTTT-TAA--A-A-T----TTCGCTT----TGT----AAT----CTTAGCTACCTCA-TTCGA--TTGGCAATA--C-TA--ACAT-C----AATCCACATTTCTG---GCAGTCTCTCGGTCCTTCACTGTTAATCAGGTCTATATATTTTAT--TG-TG-T-----TGATTAGA-CTG------TA-T---GTTTTAAAGGGTATT-AGGTTATACATATTATTC-TTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCAATATCATGTTGTGTTTG-TAA--CC-----C-TCGC--TCTAACT-TGTCAATAGCAATTAT----AACATCAGTGA-GCACG--TTTGTATTATCTAGAAAtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): ACAACAGGTAAAAATGAACATGTGTTGTTGACACATAATATAAATAAGAAAAACTGTTGGTTTTTTCACTTGTTTAGAATATGTTATTATTATTATTACTACTATTTCCTAAATCATCTACAATTTCCATTAGTATTAATGGTTAGTCTTGAATCCTAACACTTATCTTTCCAATTATTTCCAAAATGTTACATTTTTTTATATATATATTGAATGAAATATCCTTTTGTATTTTTAAC
Unaligned ( gi|20 ): GATTTTTAACATATCTTCATAAAATATTTTCGGCATCGAAAAAAATTAATACAAATAATTGTCTTTATTTTATGACATTTAAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 22222 22222222 222222222222222 11111 11111111 22222222222 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 2222222 111 22222 11111 111 222 2222222222222 2222 111111 1111111111 1 1111 111111 44444444444444444444444444444444444444 1 33 111111 11111111 11 11111 222222222222222 1111 1 444444 33333333333333333 1111 11 11111 33333333333333333333333333333333 22222222222222222222222222222222222 111111111 111 2222222 11 1 22 11 111 11 1111 333333 111 11 11 111 77777777777777 4444444 1 222 333333 1 1 11 1 1 1 11 11 222 6666666666666
lowQualScore : 1 1 4 4 2 4 1 777 777 1 9999 55555 66666 0 1 0 9 3 55 999 1 5 3 33333 3 1 22222222 0 55 3 1 77 9999 3 0 777 777 555555555555555 4 22222 0 44444444 00000000000 1 777 8888888 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 66 66 999 22 777 0 66 22 1111111 1 5555 555 11111 4 88888 0 22 666 44 333 3 11 1 1 22 1 1 4 3333333333333 1 666 1111 4 111111 2 3 22 8888 9999999999 7777 1 0 1 1 0 0 55 1 555 3 7777 1 1 4 4 777777 4 4 22222222222222222222222222222222222222 2 0 1 2 1 33 111111 55 55 55 88888888 77 2 8888 88 0 1 1 1 33 1 11 0 55 5 4 11111 888888888888888 5 2 2 1 66 0 0000 1 22 1 1 9999 1 2 3 7 444444 4 11111111111111111 1 6666 1 9999 4 0 2 8 999 2 88 0 4 5 1 1 5 11 1 777 77777 33333333333333333333333333333333 3 99999999999999999999999999999999999 1 1 22 1 22 1 11 1 555555555 6 111 7777777 1 5 1 1 22 6 99 99 3 6 7 1 88 1 1 1 4 1 1 99 1 66 1 66 5 1 33 2 1 1 8 1 3 0 444 8 0 8 0 11 0 7777 1 3 0 11 3 444444 1 1 6 0 3 0 777777 1 222 3 0 11 0 11 444 8 00000000000000 1 3333333 7 7 7 3 6 7 333 7 888888 0 1 1 1 1 1 0 6 7 0 5 2 6 55 7 7 3 1 0 0 3 6 3 3 88 44 6 0 333 6 3333333333333 3
lowQualScore : . . . . . . . ... ... . .... ..... ..... . . . . . .. ... . . . ..... . . ........ . .. . . .. .... . . ... ... ............... . ..... . ........ ........... . ... ....... ............................................................................................................................................... .. .. ... .. ... . .. .. ....... . .... ... ..... . ..... . .. ... .. ... . .. . . .. . . . ............. . ... .... . ...... . . .. .... .......... .... . . . . . . .. . ... . .... . . . . ...... . . ...................................... . . . . . .. ...... .. .. .. ........ .. . .... .. . . . . .. . .. . .. . . ..... ............... . . . . .. . .... . .. . . .... . . . . ...... . ................. . .... . .... . . . . ... . .. . . . . . . .. . ... ..... ................................ . ................................... . . .. . .. . .. . ......... . ... ....... . . . . .. . .. .. . . . . .. . . . . . . .. . .. . .. . . .. . . . . . . . ... . . . . .. . .... . . . .. . ...... . . . . . . ...... . ... . . .. . .. ... . .............. . ....... . . . . . . ... . ...... . . . . . . . . . . . . . .. . . . . . . . . . . .. .. . . ... . ............. .
lowQualScore : 1 0 0 0 3 0 0 555 555 0 6666 66666 44444 8 0 5 1 6 00 999 8 9 3 00000 5 8 11111111 1 66 6 0 88 0000 6 8 000 000 000000000000000 0 22222 8 55555555 00000000000 0 000 9999999 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 11 11 888 00 666 9 11 77 6666666 0 3333 666 99999 4 66666 7 44 999 33 555 2 66 0 2 66 0 4 0 4444444444444 0 999 3333 0 555555 4 0 22 5555 7777777777 3333 0 7 0 4 6 8 55 0 222 2 1111 0 6 0 0 111111 0 0 88888888888888888888888888888888888888 5 8 4 0 4 00 555555 55 44 55 99999999 33 4 0000 11 7 0 0 2 11 4 99 8 55 2 4 11111 222222222222222 0 0 8 4 11 4 6666 8 99 3 9 4444 3 7 3 3 333333 4 66666666666666666 1 0000 7 4444 4 7 4 9 777 6 66 9 5 0 1 0 0 99 1 111 00000 00000000000000000000000000000000 9 88888888888888888888888888888888888 0 0 88 0 00 0 88 7 666666666 3 777 5555555 0 2 0 0 00 7 77 22 5 7 3 7 88 0 0 0 0 7 0 33 9 00 0 44 7 7 66 7 4 4 0 0 8 8 000 0 6 0 8 00 8 0000 4 2 6 88 2 000000 4 0 0 8 8 6 444444 4 444 2 8 00 8 22 000 0 00000000000000 0 3333333 3 3 3 3 7 3 333 3 333333 7 0 0 0 0 0 7 7 3 0 5 5 7 77 3 3 3 0 7 7 3 7 7 3 33 00 7 7 333 7 3333333333333 7
consensus : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCC-AGAATT--CT---TTGACNGATCG-NCATTATATATC-AT------TNAGCANTTCATTTTGT----ANTTTAA----ACCAATAAAGA-CGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--TT------A--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTC--TCTAGTGTTAT--CTAGAACAGATATATTAAA-CCACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
Reference ( family-173 ) : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCC-AGAATT--CT---TTGACNGATCG-NCATT-TATATC-AT------TNAGCANTTCATTTTGT----ANTTTAA----ACCAATAAAGA-CGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--TT------A--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTC--TCTAGTGTTAT--CTAGAACAGATATATTAAA-CCACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|1 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGTCGG-AGCTTGACTTAGGTATAGGATTTATCATAATAGATTTACCC-A-TAA-AGATGGAATAAAA-CCTGTATTAAAACAAAAATTAAAAAGAACATGTT-AAAC--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTATTTAGCATTTTCA---ATAGCTT---ATT---------------TTACT-TCT----TGAATAGATATAT--------GCTCATC---CAA-----AATA---AAAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GGATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCATTTTTACTTAAAAC--ATCCTTAACA--TCT-GAAGTGA-AGCTA---CCATCAT--CCAAA-AGT-----ACCTCCATTGGAAT-TGAC-CTTT---TCTTGTTATTATGTATGCCTAGTTTACCAATAGTTTTCC-AGAATT--CT---T---CGGATCA-TTATT-TATATC-AT------TTAATATTTCATCTTGT----ATTTTAT----ACTAATGTTGG-CGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTTAT-TTT-TAGATATA-T----ACCA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACTT------A--C-AA--ACAT-A----GTTCCATAAATGAG---TCAAAGTATTACTCCACCAAGGCTTTCCAA---CGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACATACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACTAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----TACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTGATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACTAATATT---ATTAC---AAAGGTTGACAGCATCAACAGCACGGACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCGTGATTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGATATAGATGTAAAATCATTGTTTATAA--AA------CCATTAAG-GATAC-ACATATAAGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTAGTCTTTAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGATGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGTATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTC--TCTAGTGTTAT--CGAGAACAGATATGTTATA-CCACTTT---ACAATGT-CATTGCGAATAAAAAGTTCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAGAT-ATATATATGTTTGCGATTGTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACACAAAATTATAACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGTGAACCATGTAATGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATTAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGAAATTGACGGTTGTTCTTTAATGAAGACTTATGGGACATTACCT-TAATTTTATCGGCACTATATTTCAACTTAGCGATTACCACACC-GACTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAAACAGAATTAATTTTCAGGCTAT---GTGAAATAAGTGAGTTGA--------T----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|10 : tgatTGTGATACCCCTGT-AAGA-CATAGGGTCACGTGGAT-CATTATTAGCA-GATTTAAGGATAGGGTT-A--ATGATACCCATACCCCA-TTC-TGAGAGAATAATT-CCGGTGTTAAAACAAACATTAAATAGTACATGTA-AAAACGAGATAGC---TGT-ATCATTTTTA-AAAATTTC-TATA-G-GTA-GATC-ATCTATACCGCACGCCTTACCATC-CTTC-GAATTAAAA---ACAGCTT---TAC---------------GTATT-TCA----AAAATAG---TAA--------TATCATTTTCAAATTC--AGGCACAAAAT---C---ACT---------A---------TT-----TA----T-----TGAAGCAG----C----AAC-A------------G-GTAA----AA--T------------GTTGTTATG--TGATGACGCATTA----TATAAA--TTA-----GA--AAA--ACT--GTTTTTCCATTT--ATTAAGAAC--ATATTCAGTA--TT-----GTTA---TTA---ATATTTT--CCATATCGTCTACAACTTCCATTGGTA--TAATATTTT---TCTTTTGAAAACCAACACCTATCTTTCCAATACTTTTCC-AAAAAT--TT------ACAGA------ATT-TTTATCAATATCTGATAAG-AAGTCATTTTGT----ATTTTAA----ACCAATATATT-CGTTTAGATTTTTGAACCTCTCTATTAAA-ACC--TTTTCTGCATCGTAAAA---AGTTA-A-TACGAAGAATTTTCT-TTT-GAAAT--A-T----GTTA--T----GAC----ATT----TCAAGTACCCTTT-TTC-----T------G--CAAA--ACAT-ACTTTATTCCATAAATCTG---ACAGATATTCGTTCCACCAAGGTTTACCAATTTTCCTACCTTTAT--Ttgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|11 : gctatG-CACCAA-AATGGTTTGGAAGTTACTGGCCATCAACTGATCTGCTGGGGATTGATCAAGGTGTATGTAGACGTTCTCATACTGTTTGCTAGTCTTCAGT-----TTTGG----C-TT--CTGTATCATGATCGTCGTTGGTCATGAATTTAGCAATTACAACGCCCGGTT----TGCCATCACTGGTAGAGTTCTTGCGCTGAGCACTGGCGCACA-CAACATCACTCACTCGGAGACCGTCGCGT---ATAAGAGAGTTCACCATGTTGC----TGACATTCTCATTTGCATTCTCTGGAAGGCCTCTAAg
gi|12 : ATATATAAAAGG--------CCTTCATTCTGGTATTTATAAATATCTGTTAAAAGAGTACCATA------AAAAGCAGTTACATCAAAAGACCTTGAAGAATTTTCAGGTGGTAAATAACAAACACATGGCAA-----------------CCTTATGATTAAACTTCAACCATAGAAATCCTTCAAACGAGT-TT-T--CTAAAATGGATATATCAAATTCATTAA---ATAAT-T-CGTTCTTGACAAAGAAACCAACTCCACCAGAACCGGCTCTAGCATTTTTATGTA---TAAC-------TTTTCGGTTCAAACCAAACCATGTATAACCTTCTAAGGTCAATTTGT-GT---TCATGAAAT---AGATGAGTTTCTGCTTATG-CTAAAATATCAATATC---AGAATTAAAAACACATAATGATCTTAAATTAAAATTGTC------AGATTCACAGTCAACACTCCAGTCACGGACGTTCCAAAACTCGGCttaatacattaagagggatctcagactgttgatgatgtgggccattggtgacaatagattcaagttttgcactcatttcgttaagttcctctgctacttcaactttgatgggatctttaaaagagtctaacttaagatcaatatccttacggacacgactcatttcagagttgacacgcttgtctaacaattgggcaaatttatttgatattctctactcgaggcttgattcaagtttgtccctgcattccttaacggaagagaacagtatgtgcatgtcagcag
gi|14 : atAATGCAACCCCTCTGT-AAGA-AAGGGGGTCTCTTGGGT-CCGTAACAGATT-ACTTGGGTATTGTGTT-A--ATGATACATTTACCCCA-GGT-ATATGGAACTGTG-CCAT--TTAAA------ATTTAATAAAACATG-A-AGAA--ATAAAACGGGCGT-ATCATT--------ACA---------------------CAATACC-------TCAC------TTT-GCATTTTCA---ATGGCTT---CTT---------------TAACT-TCA----AAAACAGAGATAT--------TATCATT---AAA-----AGGC---AAAT---T---TGT---------G------------G---TG----T-----T-----Atgacagctaagtacgattactcttacctcggatgttttgccctcagttgttgttgcgacgtccattagtattgttgctataacttagtcccgctctggtccacctaacactac
gi|15 : AGTGCCAGACCTCGAT-ATGA-AAGATGATATCTTACAT-TATCCG-AACCTGACTTAGGAATAGGATT-T--ACGATA---TTATTCTAAGATCATATGCAACT------AATATCAAAACATATGTAAAAAAATATATGTA-AAAC--A---AGTAGACGT-ATGTTTTTTT-AAAACATC-AATT-G-GTA-TGTT-TTCTCCACTAATCGTTTTATC-CTTCTTT-GC
gi|16 : gattatgcaAT-----CC-GTA--G--ATATATTTGC----AT-T----ATCA--------ACA-------TTCATACACCA-AGTAAGAGTTAATGATCCGCAATACCAGTTGGAA-----Cca
gi|17 : caatatccgtgtgggaacgaagactgccatccgtgatgatgtctgcacttgcgttaaaatgtcagggtcgggaacgaatgggtcaggaatgatacgtgcaaaatcgaacacgttttcagttgtttcttatacataagaTTTAGTAGAAATAGATGTATAATCGTTGTT-AGAAC-AATTTCTCCCATTTTA-CATAC-ACAT---------GATAAGAAAATCTGTAAAAAGCTCACCATAATG-ATTTGTTTTAAAATCGATAACATCCCGTTCA-ATA---ATATCACCAACGCCGATAATAAAATCGTCCATT-TCGCCACATCTACTATTGAA--GTCGTCATATATA
gi|18 : TAAAATAAACATTAACATGTACATGTA-AAAA--AT------GACATAATTTTTTTTA-AAAA-ATG-CA---G-ATA--ATTCATCGATACCACATGCCTTACC-ATTTTTC-GAA---TCAAAGACAGCTT---TAC---------------GTATT-TC-----AAAATAG---TAA--------TGTCATT------------GTC---AAAT---T---
gi|19 : taATGCAATGCTTCTGT-AAGGCAAGCGGG-CTATTTGAT-CTGTAATAGAA-GATTTGGGTATTGGAAT-G--ATTATACACCTACCAAT-AAT-AAATGGAACATTT-CCATTTGAAAAACAAATATTAAACAAACAATGAAGAAAA--AT-CAAC-AAGGT-ATTAcaggtacaaaaatattatacaa
gi|2 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGGCGG-AGCTTGACTTAGGTATAGGATT-T--ATAATAGATTTACCCCA-TAA-AGATGGAA-TACAACCTTTATTAAAACAAACATTAAAAAGAACATGTA-AAAA--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTTTTA-GCATTTTCA---ATAGCTT---TTT---------------TTACT-TCT----AGAATAGATATAT--------GCTCATC---CAA-----AATA---AAAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GAATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCACTT--ACTTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG-----AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCC-AGAATT--CT---TT--CGGATCA-TTATT-TATATC-AT------TTAACATATCATCTTGT----ATTTTAT----ACCAATGATGG-CGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACTT------A--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCTAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGTTAA-CAATA--CCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTAATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTCAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTC--TCTAGTGTTAT--CTAGAACAGATATATTAAA-CCACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T--T-------TTTGCGATTATTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGACCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCATTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTTGCCGTGTTCCAGCTGTGTTGGCTCTGTCTGTTTGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTGTGAAACCGATCCCGTAGAAGCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGATAGCCGTTATCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGATTATTCTTTAATGAAGACTTGGAAGACATTACCT-TACTTTTATCGGCACTAGATTTCAACTTAGCGATTACCACACC-GGCTCTACTGTTATTATTTG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAGACAGAATTAATTTTCAGGCCAT---GTGAAATAAGTGAGTTGACC---TT-CTCATCCAGATTTTCGTTGACACTTTCGGGGAGATTTCTAAc
gi|21 : CAACACGTGTATCAT-TAGTGATAATT-ACCACCGCAGTTGATGGACATGAA-GAT--TTTT
gi|3 : T--ATA--ATC--TTTCTCCCATTT--ACTTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG-----AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCC-AGAATT--CT---TT--CGGATCA-TTATT-TATATC-AT------TTAACATATCATCTTGT----ATTTTAT----ACCAATGATGG-CGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATAAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACTT------A--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATATTAATACTGAATGATCTGGAATACCTGCTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAACATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCCACGTGACGGAAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTC--TCTAGTGTTAT--CTAGAACAGATATATTAAA-CCACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGT
gi|4 : AATGCAATCCCTCTTT-AAGA-AAGGGGGTCCCTTGGGT-CCGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGACACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAGCGTG-A-AGAA--ATAAAATGGACGG-TTCATTACAC-AGAACCTC--ACTTG-GGA-TATT-ATCAATATCACAAGCTTTACC-TCGTTTT-GCATTTTCA---ACGGCTT---TTT---------------TCACT-TCA----AAAACAGATATAT--------TATCATT---GAA-----AGAC---AGATTTAT---AGTGTTACTATCA---------TCCGAAATG----TCTGAAT-----GC----A----AAT-GTATCTGAGC---A-TGTC----CA--TC---AC-TG---GTT-TTATG--AAAT-A-AC----GA------------A-----CT--AAA--GTC--AATTTTCCACTT--GTTCAAAAC--ATCTGAAACA------AAAGTCG-AAATAGAGCCATCAT-----GA-AGTTT--AACTTCAAAAGGTAT---AC-ATTTAG-TTTTATACTTGTTTACACCGATCTTACCGATAGACTTCC-AGAA----CT---TGGACTGATCA-ACATTACA-ATC-AT------TAAGTAATTCATTTTTT----AAAGAGA----ACCAATAAAAA-CGCTTTGACTTTTGTACCTCACGGTCAAATAAT--TTACGAACTT-GTACA-T--ATTCAGA-T-TTAAG--ATC-TT-TTC-T-GAC--A-T----TTCG--TTGAGTAC----A-C----TTAAGCCACCTTCGTTCGGCATT------A--C-TA--ACATCA----G-TCCACATTTCTG---ATAATCTCTCGGTCCACCACTGTTTACCAGGTCTACATCTTTTAT--T-CTG-T-----TGAT------TAGAC---TG-TATAGTTTTAAAGGGTATT-TGATTATACAT----ATTATTCTTAACTATACTACACCAATCTT---GATAAAC-ACTATCGATATCATGTTGTGTTTA-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATTAGTAAGCACT---TCTGTATTATTTAG-AAATGAGTCTGGTAATTTA-GTT--AAATTAAATTTATCATAAC-TACTACTTTGTAGTGTTTCGTT-----T-----TC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGG-------------TGCAAGAAAATTCAAATCACCTGACCTGTTTATTAAATCAACAGTCCTAACAAC-AGAAAAATCTGTAA--AACAA-GACAA-ATCATCATGAC-CGC-AAATGCAATAATCTACCACTGACAAACCCTTGGTAGAAACAGATGTAAAATCGTTG-TTAGAAC-AATTTCTCCCATTTAACCATGTGACATTTTTGAGTTGA
gi|5 : ttgttAATGCAATCCCTCTAT-AAGA-AAGGGAGTCCTTTGGGT-CCGTAGTAGAA-AACTTGGGTATTGGGTT-A--ATGATACATTAACCCCA-AAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAACATGAA-GAAA--A-AGAATGGACGT-ATCATT---ACACAATACCTCACTTG-GAA-TATT-ATCAATACCACAAGCTTTAAC-TCGCTTT-GCATTTTAA---ATGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----ATGC---AAAT---TTGCAGT---------ATTACTATCATTCG---AGAAGTC-----T-----ACATGTC----AAT-GTGCC----T---GGTCAT----GT--CC---AT-TA----CTATTAT------T------GTAAA---ATAACG--TA-----CT--AAA--ATC---------AACTT---TTCAAAAC--ATCTGAAATAGATGTAGAAATAA-A---A---CCATCAT-----GA-AGTTT--AACTTCAAAAGGTAT---AC-ATTTAGAT-TTGTACTGGTTAACACCGATCTTACCGATTGACTTCC-AGAA----CT---TGGACTGATCG-ACATTACA-ATC-AA------TAAGCAATTCATTTTGT----AAAAAAA----ACCAATAAAAA-CGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTTCAAACTT-GTACA-T--ATTCAGA-T-TTAAG-----ATT-TTT-T--------T----AACA--T----TTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCATT------A--C-TA--ACATCA----G-TCCATATTTCTG---ACAATCTCTCGGTCCACCATTGTTTACCAGGTCTACATCTTTTATTGTATTGAT-----TAG----------AC---TG-TATAGTTTTTAAGGGTATA-TGGTTATACAT----ATTATTCTTAACTATATTACACTAATCCT---GATAAAC-ACTATCGATATCATGTTGTGTTTG-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATCAG--A-CAGCACTTCTGTATTATTTAGAAAATAA-TCTGGTAATTTA-GTT--AAATCAAATTTATCATAAC-TATTA----CTAA-G--CGGTG---TATAAATATC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATAAAAGTTGGTG-----CAAGATAACTCAAATCAT---CTGAC-----CTGTTTATTAAATCCACAGTCCTAACAAT-TGAAAAATCTGTAA--AAC-GAGACAA-ATCATCATGAC-TGC-AAATGCAATAATCTACCACTGACAAACCCTTATTAGAAATAGATGTATAATCGTTGTTAAAAC--AATTTCTCCCATTTAA-CATAC-ACATATTGGTACTGA
gi|6 : tggct--AACCGTCATCGGTAT-T-AC-TTTTG--TCCTGTCATTTTTAATTCCGATTTGGCCAATTTCTTTCC-AAAATTGATT---TTGGTTT-TTA-TCATT-TACATT-TT------CTA-TATTTCTGCTTGT----ACGTTAA----ACCGGTAACTA-CGTTTAGTCCTTTGCACCTATCTCTCAAA--ACGTTTTCTAGCA--GAACAAT--AA----A-T---AAC--TTTATT-TTTCTTCACA-A-TTTT-ATCA--A----TAC----ATT----TTAACCATTCTTT-TTTGG--TT------AAAC-AC--ACAT-T----ATTCCAAA-----G---TCAAATGTTTGCTCAACCATGGATTACCAGGTC---GCCTCTTAT--T-TTG-T-----AAA-------CATGA---TAATATGGGCTTGCAGGGTAGCGTAGCTA-ACAT----TTCCTCTTTAGCTAGGCTACATCAACCAT---TACATGC-ACTATCGTTATCA---T---CTTG-TGT--ACGAAAAC-C-TCCCTCCAAGTCTA-CAATAGACGTGTT----TAC--TGATGA-TAATA--T--ATATCTGACAGAAAGTCA-CGAGGTACATT--TGTA-ACATTAAATCCATCACA-------A----ATAA-ATTCGACT---T-T----------------AGACAGTTGGTAGTATGT----TTTATTATAGTGAAACTTATATTTAATATTCTAGCTTAAAATAGAGTGGTAGGGTAAACCAGATCGAGATAGAAA--ATTGCCTTTATTTT---ATTCC--------TTCACTAGCTCGGTTACTCTGATAATATGAGA---CT-CCGAAAATAATGATAACGTTTTTATGACTTACAAAAT--AATAGTCAACAACCGAAATGCCTTTAACAGACACAGAAGTGAAATC---ATTTAAAATGCATTTCGACCATTTAG-CATAC-ACATATAAGCGTTGATTGAAAAATCAATTAAATCATTCCCA-TACGCATTTTACTTAAAATC--CG-CATTATTATGACCTACTTA-CTCGTCAACACCAAAAATATAATCAG-CGGAATCAACACAGCTACTGTTAAAATATCTACATATATAAATAATACATGTTCCATCATTCTGATGCT------------TTAAAAGAGTTTCAAAATAGTTATGCACATCAACGCTAC--GACTT----GAGTTCTCTGGTGGCAAATAGCG-----GTGGATAAATAACACTA---------TTAT---CAAGTTTTAACCATAAAATACATTT--AGTAGCATTATAACC--AATAGAAATGTCAAA-----TTTAGAACAAAGTAAATTTTGGATTAAAAACCCGACCCCATCAGACCCTGTTCTTGCTCTAATAT
gi|7 : gATACCTCTAT-ATGA-CATAGGATTTCTTGGAT-CTGTGTT-TCCTGACTTTGGTATAGGGCT-C--ATAATGCCTAGGCCCCA-GTC-AATCGGGATCATG-CCAGTATTAAAACACACATTAAATAATATATGTA-AAAT--AGAAAAAGCA-GT-GTAATTTTTA-AGTATTTC-AGAC-G-GTA-GAGT-GTCAAGACCACTGGCATTGTC-GCTCTTA-GCA-CTAAA---ACAGCCT---TAT---------------GTACG-TCT----TGAAGTGATATAT--------AAGAATT---AAAGCTTGATAT---AAA--------AGC---------G---------TT-----TG----T-----A-----AC----T----GACGGT-------TTAGA-TT-C-----A--TC---AT-TATC-ACCCTCCTG--G--TTA-GCTGTTACATTATACAGAT-------CTGAAAA--ACA--TGTTTTCCATTT--ATCCAAAACTGATTTTG--TA--TCC----CTTA-AGATA---TCACCATTGTCAGA-AACC----ACTTCTATAGGTAT-TAAT-TTCT---TTTTCTGAAAGGCTATACCAACGTTCCCACTAGATTTCCAAAAAAT--CTGAATTATAAGATTGAACACT-TGAA-------------AGCAGATCATTTTGC----AATTT-A----ACCAATAAAGT-TGTTTCTCTTTTTGCACTTGTCTGTTAAATGTC--TTTTGAG-AC-G-ACA-TCAACTCATACC-TTAAC--CTTTTC-TTT-CACTTA-C-TTTGGTGCA--T----TG-----AAT----ATA--TAA--TTT-TTCGT--TT------G--T-AATTACTT-T----ATTCCATAGCTCAGTTTACAA---CAAGTTCCACCATGGTTTCTTAA--CTGTTTTTTTTTT--AATTA-TATAAACAAT---GTCCATAAGAGTA-TAC---TTTTGACGGTAAC-TTATCAAACAT----TTTCCGTTTAATCAACTTACA-CAATTATGAATATGA-C-ATTGT-AATATC---------TTGCTGAATTCAAAGGC-T-ATGTTCTAACTCT---AA-AACAGTATTATGCAATATTTGT-A-CAATA--TTAGTTCTA--CATAAAAT-A-TCAGACTTATTATTGCAAACATCAGTTTT----TACCGCATCAC---CTAAAG-CAGGTTGCGT-T-----TC-----------ACAGTTCA----AT-TCAGATGTA--------ACT-------TTGATATTCCAGGTAAGAATAGAGTGGTCTGG
gi|8 : tATGCAATCCCT-TATTAAGC-AAGGGG-TCCCTTGGGTTCAGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGATACATTTAACCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAACAAAACATG-A-AGAA--ATAAAACGGACGT-ACCATT---ACACAATACCTCACT-TTGAA-TATT-ATCAATACCACAAGCTTTACC-TCGCTTT-ACATTTTCA---ATGGCTTTTTTTTACTTAAAAAACAGAGTTATTATCATTAAAAGACAAATGTACAGTGTTACTATCATCCG-AGA-----AGTC---T--T---T---AAT---------G---------TAAA---TG----T-----------GC----CTGGTAAC-GT-------TC--A-TTAC----TA--TT---AT-T-------------------------GTAAA---ATAAAGA--A-----CT--AAATCATC--TTTC---CACTT--GACGAAAAC--ATCTGAAATA------GATGTAG-AAATAGATTCATCAT-----GA-AGTTT--AACTTCTAAAGGTAT---AC-ATTTAGAT-TTGTACTAGTTTAAACCGATCTTACCGATTGACTTCC-AGAA----CT---TGGACTGATCG-ACATTACA-ATC-AA------TAAGTAATTCATTTTGTGAAGAGT--------ACCAATAAAAA-CGTTTCGACTTATGTACCTCACGATCAAGTAAT--TTACGAACTG-GTACA-T--ATTCAGA-T-TTAAG-----ATC-TTT-T---T----T----AACA--T----TTCGCTGAGTACACTTAAGTCACCTTCGTTCAGCATT------A--C-TA--ACAT-A----AGTCTATATTTCTG---ACAATCTCTCGGTCCACAGCTGTTCACCAGGTCTACATCTTTTAT--TG-TG-T-----TGA
gi|8 : tggttgcttACTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCGATATCA---TGTGTTTG-TAA--T------------CCTCCAACT-TGTCAATAGCAATATT----AACATCAGTAAGCACT---TCTGT------------ATTA-TTTAGAAAATTA-GTT--AAATCAAATTTATCATAAA-TATTA----CTGA-GT--GGTG---T-T-----TCAGTATCA--CAAC-GCAAC----AT-G----TT-A--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGGatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|9 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagAACGGACGA-ATCATT---ACACAATACCTCACT-T-GTAATATT-ATCTATACAACAAGCTTTACA-TCGCTTT-GCATTTCCA---ATGCCCT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGGC---AAAT---T---TGC---------A------------G---TG----T----------------------AAC-G------------A-TTACCCGAGAAGTCTAAATGTAAATGTGCCTGGGCAGGTTCA-TTACTAGTATTGTAAAG--TAAAGAACT--AAA--ATCAGCTTTTC--ACTT--GTCCAAAAC--ATCTGAAATA--GAT-GTAGAAACAGA-A---CCCTCAT--T---A-ATTTT--AACTTCAAAAGGTATACGA--TTAC---ACCTGTACTGGTTTACACCTATCTTACCGACTGACTTCC-AGAA----CT---TTGACTGATTG-ACATTATA-ATC-AT------TAAGTAATTGATTTTGT----A----AAGAGTACCAGTAAAAAATGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTACGAACTT-GTACATT---TTCAAA-T-TTAAG--A--ATTGTTT-TAAA---A-T----TTCGCTT----TGT----AAT----CTTAGCTACCTCA-TTCGA--TTGGCAATA--C-TA--ACAT-C----AATCCACATTTCTG---GCAGTCTCTCGGTCCTTCACTGTTAATCAGGTCTATATATTTTAT--TGT-G-T-----TGATTAGA-CTG------TA-T---GTTTTAAAGGGTATT-AGGTTATACATATTATTC-TTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCAATATCATGTTGTGTTTG-TAA--CC-----C-TCGC--TCTAACT-TGTCAATAGCAATTAT----AACATCAGTGA-GCACG--TTTGTATTATCTAGAAAtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): ACAACAGGTAAAAATGAACATGTGTTGTTGACACATAATATAAATAAGAAAAACTGTTGGTTTTTTCACTTGTTTAGAATATGTTATTATTATTATTACTACTATTTCCTAAATCATCTACAATTTCCATTAGTATTAATGGTTAGTCTTGAATCCTAACACTTATCTTTCCAATTATTTCCAAAATGTTACATTTTTTTATATATATATTGAATGAAATATCCTTTTGTATTTTTAAC
Unaligned ( gi|20 ): GATTTTTAACATATCTTCATAAAATATTTTCGGCATCGAAAAAAATTAATACAAATAATTGTCTTTATTTTATGACATTTAAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 22222 22222222 222222222222222 11111 11111111 22222222222 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 2222222 111 22222 11111 111 222 3333333333 22222 1111111111 1 1111 111111 44444444444444444444444444444444444444 1 333333333 11111111 11 11111 222222222222222 1111 1 444444 33333333333333333 1111 11 11111 33333333333333333333333333333333 22222222222222222222222222222222222 111111111 111 2222222 11 1 22 11 111 11 1111 5555555 111 11 11 111 77777777777777 4444444 1 222 333333 1 1 11 1 1 1 11 11 222 6666666666666
lowQualScore : 1 1 4 4 2 4 1 777 777 1 9999 55555 66666 0 1 0 9 3 55 999 1 5 3 33333 3 1 22222222 0 55 3 1 77 9999 3 0 777 777 555555555555555 4 22222 0 44444444 00000000000 1 777 8888888 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 66 66 999 22 777 0 66 22 1111111 1 5555 555 11111 4 88888 0 22 666 44 333 3 11 1 1 22 1 1 1111111111 2 4 44 00000 8888 55 8888 3 22 8888 9999999999 4 333 1 0 1 1 0 0 55 1 555 3 7777 1 1 4 4 777777 4 4 22222222222222222222222222222222222222 2 0 1 2 1 777777777 55 55 55 88888888 77 2 8888 88 0 1 1 1 33 1 11 0 55 88 4 11111 888888888888888 5 2 2 1 66 0 0000 1 22 1 1 9999 1 2 3 7 444444 4 11111111111111111 1 6666 1 9999 4 0 2 8 999 2 88 0 4 5 1 1 5 11 1 777 77777 33333333333333333333333333333333 3 99999999999999999999999999999999999 1 1 22 1 22 1 11 1 555555555 6 111 7777777 1 5 1 1 22 6 99 99 3 6 7 1 88 1 1 1 4 1 1 99 1 66 1 66 5 1 33 2 1 1 8 1 3 0 444 8 0 8 0 11 0 7777 1 3 0 0 1 0 3 1111111 1 1 6 0 3 0 777777 1 222 3 0 11 0 11 444 8 00000000000000 1 3333333 7 7 7 3 6 7 333 7 888888 0 1 1 1 1 1 0 6 7 0 5 2 6 55 7 7 3 1 0 0 3 6 3 3 88 44 6 0 333 6 3333333333333 3
lowQualScore : . . . . . . . ... ... . .... ..... ..... . . . . . .. ... . . . ..... . . ........ . .. . . .. .... . . ... ... ............... . ..... . ........ ........... . ... ....... ............................................................................................................................................... .. .. ... .. ... . .. .. ....... . .... ... ..... . ..... . .. ... .. ... . .. . . .. . . .......... . . .. ..... .... .. .... . .. .... .......... . ... . . . . . . .. . ... . .... . . . . ...... . . ...................................... . . . . . ......... .. .. .. ........ .. . .... .. . . . . .. . .. . .. .. . ..... ............... . . . . .. . .... . .. . . .... . . . . ...... . ................. . .... . .... . . . . ... . .. . . . . . . .. . ... ..... ................................ . ................................... . . .. . .. . .. . ......... . ... ....... . . . . .. . .. .. . . . . .. . . . . . . .. . .. . .. . . .. . . . . . . . ... . . . . .. . .... . . . . . . . ....... . . . . . . ...... . ... . . .. . .. ... . .............. . ....... . . . . . . ... . ...... . . . . . . . . . . . . . .. . . . . . . . . . . .. .. . . ... . ............. .
lowQualScore : 1 0 0 0 3 0 0 555 555 0 6666 66666 44444 8 0 5 1 6 00 999 8 9 3 00000 5 8 11111111 1 66 6 0 88 0000 6 8 000 000 000000000000000 0 22222 8 55555555 00000000000 0 000 9999999 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 11 11 888 00 666 9 11 77 6666666 0 3333 666 99999 4 66666 7 44 999 33 555 2 66 0 2 66 0 4 5555555555 4 0 00 55555 5555 55 0000 0 22 5555 7777777777 0 333 0 7 0 4 6 8 55 0 222 2 1111 0 6 0 0 111111 0 0 88888888888888888888888888888888888888 5 8 4 0 4 999999999 55 44 55 99999999 33 4 0000 11 7 0 0 2 11 4 99 8 55 88 4 11111 222222222222222 0 0 8 4 11 4 6666 8 99 3 9 4444 3 7 3 3 333333 4 66666666666666666 1 0000 7 4444 4 7 4 9 777 6 66 9 5 0 1 0 0 99 1 111 00000 00000000000000000000000000000000 9 88888888888888888888888888888888888 0 0 88 0 00 0 88 7 666666666 3 777 5555555 0 2 0 0 00 7 77 22 5 7 3 7 88 0 0 0 0 7 0 33 9 00 0 44 7 7 66 7 4 4 0 0 8 8 000 0 6 0 8 00 8 0000 4 2 6 8 0 6 2 4444444 4 0 0 8 8 6 444444 4 444 2 8 00 8 22 000 0 00000000000000 0 3333333 3 3 3 3 7 3 333 3 333333 7 0 0 0 0 0 7 7 3 0 5 5 7 77 3 3 3 0 7 7 3 7 7 3 33 00 7 7 333 7 3333333333333 7
consensus : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCCAGAATT--CTTTGACTG-ATCGNCATTAT-ATAT----CAT--T---AAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
Reference ( family-173 ) : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCCAGAATT--CTTTGACNG-ATCGNCATTAT-ATAT----CAT--T---NAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T-----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|1 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGTCGG-AGCTTGACTTAGGTATAGGATTTATCATAATAGATTTACCC-A-TAA-AGATGGAATAAAA-CCTGTATTAAAACAAAAATTAAAAAGAACATGTT-AAAC--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTATTTAGCATTTTCA---ATAGCTT---ATT---------------TTACT-TCT----TGAATAGATATAT--------GCTCATC---CAA-----AATA---AAAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GGATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCATTTTTACTTAAAAC--ATCCTTAACA--TCT-GAAGTGA-AGCTA---CCATCAT--CCAAA-AGT-----ACCTCCATTGGAAT-TGAC-CTTT---TCTTGTTATTATGTATGCCTAGTTTACCAATAGTTTTCCAGAATT--CTT---CGG-ATCATTATT-T-ATAT----CAT--T---TAATATTTCATCTTGT----ATTTTAT----ACTAAT-GTTGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTTAT-TTT-TAGATATA-T----ACCA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAT-A----GTTCCATAAATGAG---TCAAAGTATTACTCCACCAAGGCTTTCCAA---CGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACATACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACTAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----TACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTGATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACTAATATT---ATTAC---AAAGGTTGACAGCATCAACAGCACGGACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCGTGATTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGATATAGATGTAAAATCATTGTTTATAA--AA------CCATTAAG-GATAC-ACATATAAGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTAGTCTTTAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGATGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGTATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CGAGAACAGATATGTTATAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTTCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAGAT-ATATATATGTTTGCGATTGTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACACAAAATTATAACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGTGAACCATGTAATGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATTAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGAAATTGACGGTTGTTCTTTAATGAAGACTTATGGGACATTACCT-TAATTTTATCGGCACTATATTTCAACTTAGCGATTACCACACC-GACTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAAACAGAATTAATTTTCAGGCTAT---GTGAAATAAGTGAGTTGA--------T----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|10 : tgatTGTGATACCCCTGT-AAGA-CATAGGGTCACGTGGAT-CATTATTAGCA-GATTTAAGGATAGGGTT-A--ATGATACCCATACCCCA-TTC-TGAGAGAATAATT-CCGGTGTTAAAACAAACATTAAATAGTACATGTA-AAAACGAGATAGC---TGT-ATCATTTTTA-AAAATTTC-TATA-G-GTA-GATC-ATCTATACCGCACGCCTTACCATC-CTTC-GAATTAAAA---ACAGCTT---TAC---------------GTATT-TCA----AAAATAG---TAA--------TATCATTTTCAAATTC--AGGCACAAAAT---C---ACT---------A---------TT-----TA----T-----TGAAGCAG----C----AAC-A------------G-GTAA----AA--T------------GTTGTTATG--TGATGACGCATTA----TATAAA--TTA-----GA--AAA--ACT--GTTTTTCCATTT--ATTAAGAAC--ATATTCAGTA--TT-----GTTA---TTA---ATATTTT--CCATATCGTCTACAACTTCCATTGGTA--TAATATTTT---TCTTTTGAAAACCAACACCTATCTTTCCAATACTTTTCCAAAAAT--TT---ACAGAATTTTTATCA--ATAT----C-TGAT---AAG-AAGTCATTTTGT----ATTTTAA----ACCAAT-ATATTCGTTTAGATTTTTGAACCTCTCTATTAAA-ACC--TTTTCTGCATCGTAAAA---AGTTA-A-TACGAAGAATTTTCT-TTT-GAAAT--A-T----GTTA--T----GAC----ATT----TCAAGTACCCTTT-TTC-----------TG--CAAA--ACAT-ACTTTATTCCATAAATCTG---ACAGATATTCGTTCCACCAAGGTTTACCAATTTTCCTACCTTTAT--Ttgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|11 : gctatG-CACCAA-AATGGTTTGGAAGTTACTGGCCATCAACTGATCTGCTGGGGATTGATCAAGGTGTATGTAGACGTTCTCATACTGTTTGCTAGTCTTCAGT-----TTTGG----C-TT--CTGTATCATGATCGTCGTTGGTCATGAATTTAGCAATTACAACGCCCGGTT----TGCCATCACTGGTAGAGTTCTTGCGCTGAGCACTGGCGCACA-CAACATCACTCACTCGGAGACCGTCGCGT---ATAAGAGAGTTCACCATGTTGC----TGACATTCTCATTTGCATTCTCTGGAAGGCCTCTAAg
gi|12 : ATATATAAAAGG--------CCTTCATTCTGGTATTTATAAATATCTGTTAAAAGAGTACCATAAAAA------GCAGTTACATCAAAAGAC-CTTGAAGAATTTTCAGGTGGTAAATAACAAACACATGGCAA-----------------CCTTATGATTAAACTTCAACCATAGAAATCCTTCAAACGAGT-TT-T--CTAAAATGGATATATCAAATTCATTAA---ATAAT-T-CGTTCTTGACAAAGAAACCAACTCCACCAGAACCGGCTCTAGCATTTTTATGTA---TAAC-------TTTTCGGTTCAAACCAAACCATGTATAACCTTCTAAGGTCAATTTGT-GT---TCATGAAAT---AGATGAGTTTCTGCTTATG-CTAAAATATCAATATC---AGAATTAAAAACACATAATGATCTTAAATTAAAATTGTC------AGATTCACAGTCAACACTCCAGTCACGGACGTTCCAAAACTCGGCttaatacattaagagggatctcagactgttgatgatgtgggccattggtgacaatagattcaagttttgcactcatttcgttaagttcctctgctacttcaactttgatgggatctttaaaagagtctaacttaagatcaatatccttacggacacgactcatttcagagttgacacgcttgtctaacaattgggcaaatttatttgatattctctactcgaggcttgattcaagtttgtccctgcattccttaacggaagagaacagtatgtgcatgtcagcag
gi|14 : atAATGCAACCCCTCTGT-AAGA-AAGGGGGTCTCTTGGGT-CCGTAACAGATT-ACTTGGGTATTGTGTT-A--ATGATACATTTACCCCA-GGT-ATATGGAACTGTG-CCAT--TTAAA------ATTTAATAAAACATG-A-AGAA--ATAAAACGGGCGT-ATCATT--------ACA---------------------CAATACC-------TCAC------TTT-GCATTTTCA---ATGGCTT---CTT---------------TAACT-TCA----AAAACAGAGATAT--------TATCATT---AAA-----AGGC---AAAT---T---TGT---------G------------G---TG----T-----T-----Atgacagctaagtacgattactcttacctcggatgttttgccctcagttgttgttgcgacgtccattagtattgttgctataacttagtcccgctctggtccacctaacactac
gi|15 : AGTGCCAGACCTCGAT-ATGA-AAGATGATATCTTACAT-TATCCG-AACCTGACTTAGGAATAGGATT-T--ACGATA---TTATTCTAAGATCATATGCAACT------AATATCAAAACATATGTAAAAAAATATATGTA-AAAC--A---AGTAGACGT-ATGTTTTTTT-AAAACATC-AATT-G-GTA-TGTT-TTCTCCACTAATCGTTTTATC-CTTCTTT-GC
gi|16 : gattatgcaAT-----CC-GTA--G--ATATATTTGC----AT-T----ATCA--------ACA-------TTCATACACCA-AGTAAGAGTTAATGATCCGCAATACCAGTTGGAA-----Cca
gi|17 : caatatccgtgtgggaacgaagactgccatccgtgatgatgtctgcacttgcgttaaaatgtcagggtcgggaacgaatgggtcaggaatgatacgtgcaaaatcgaacacgttttcagttgtttcttatacataagaTTTAGTAGAAATAGATGTATAATCGTTGTT-AGAAC-AATTTCTCCCATTTTA-CATAC-ACAT---------GATAAGAAAATCTGTAAAAAGCTCACCATAATG-ATTTGTTTTAAAATCGATAACATCCCGTTCA-ATA---ATATCACCAACGCCGATAATAAAATCGTCCATT-TCGCCACATCTACTATTGAA--GTCGTCATATATA
gi|18 : TAAAATAAACATTAACATGTACATGTA-AAAA--AT------GACATAATTTTTTTTA-AAAA-ATG-CA---G-ATA--ATTCATCGATACCACATGCCTTACC-ATTTTTC-GAA---TCAAAGACAGCTT---TAC---------------GTATT-TC-----AAAATAG---TAA--------TGTCATT------------GTC---AAAT---T---
gi|19 : taATGCAATGCTTCTGT-AAGGCAAGCGGG-CTATTTGAT-CTGTAATAGAA-GATTTGGGTATTGGAAT-G--ATTATACACCTACCAAT-AAT-AAATGGAACATTT-CCATTTGAAAAACAAATATTAAACAAACAATGAAGAAAA--AT-CAAC-AAGGT-ATTAcaggtacaaaaatattatacaa
gi|2 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGGCGG-AGCTTGACTTAGGTATAGGATT-T--ATAATAGATTTACCCCA-TAA-AGATGGAA-TACAACCTTTATTAAAACAAACATTAAAAAGAACATGTA-AAAA--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTTTTA-GCATTTTCA---ATAGCTT---TTT---------------TTACT-TCT----AGAATAGATATAT--------GCTCATC---CAA-----AATA---AAAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GAATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCACTT--ACTTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG-----AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCCAGAATT--CTTT--CGG-ATCATTATT-T-ATAT----CAT--T---TAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCTAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGTTAA-CAATA--CCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTAATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTCAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T--T-------TTTGCGATTATTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGACCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCATTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTTGCCGTGTTCCAGCTGTGTTGGCTCTGTCTGTTTGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTGTGAAACCGATCCCGTAGAAGCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGATAGCCGTTATCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGATTATTCTTTAATGAAGACTTGGAAGACATTACCT-TACTTTTATCGGCACTAGATTTCAACTTAGCGATTACCACACC-GGCTCTACTGTTATTATTTG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAGACAGAATTAATTTTCAGGCCAT---GTGAAATAAGTGAGTTGACC---TT-CTCATCCAGATTTTCGTTGACACTTTCGGGGAGATTTCTAAc
gi|21 : CAACACGTGTATCAT-TAGTGATAATT-ACCACCGCAGTTGATGGACATGAA-GAT--TTTT
gi|3 : T--ATA--ATC--TTTCTCCCATTT--ACTTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG-----AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCCAGAATT--CTTT--CGG-ATCATTATT-T-ATAT----CAT--T---TAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATAAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATATTAATACTGAATGATCTGGAATACCTGCTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAACATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCCACGTGACGGAAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGT
gi|4 : AATGCAATCCCTCTTT-AAGA-AAGGGGGTCCCTTGGGT-CCGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGACACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAGCGTG-A-AGAA--ATAAAATGGACGG-TTCATTACAC-AGAACCTC--ACTTG-GGA-TATT-ATCAATATCACAAGCTTTACC-TCGTTTT-GCATTTTCA---ACGGCTT---TTT---------------TCACT-TCA----AAAACAGATATAT--------TATCATT---GAA-----AGAC---AGATTTAT---AGTGTTACTATCA---------TCCGAAATG----TCTGAAT-----GC----A----AAT-GTATCTGAGC---A-TGTC----CA--TC---AC-TG---GTT-TTATG--AAAT-A-AC----GA------------A-----CT--AAA--GTC--AATTTTCCACTT--GTTCAAAAC--ATCTGAAACA------AAAGTCG-AAATAGAGCCATCAT-----GA-AGTTT--AACTTCAAAAGGTAT---AC-ATTTAG-TTTTATACTTGTTTACACCGATCTTACCGATAGACTTCCAGAA----CTTGGACTG-ATCAACATTAC-A-AT----CAT--T---AAGTAATTCATTTTTT----AAAGAGA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGGTCAAATAAT--TTACGAACTT-GTACA-T--ATTCAGA-T-TTAAG--ATC-TT-TTC-T-GAC--A-T----TTCG--TTGAGTAC----A-C----TTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----G-TCCACATTTCTG---ATAATCTCTCGGTCCACCACTGTTTACCAGGTCTACATCTTTTAT--T-CTG-T-----TGAT------TAGAC---TG-TATAGTTTTAAAGGGTATT-TGATTATACAT----ATTATTCTTAACTATACTACACCAATCTT---GATAAAC-ACTATCGATATCATGTTGTGTTTA-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATTAGTAAGCACT---TCTGTATTATTTAG-AAATGAGTCTGGTAATTTA-GTT--AAATTAAATTTATCATAAC-TACTACTTTGTAGTGTTTCGTT-----T-----TC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGG-------------TGCAAGAAAATTCAAATCACCTGACCTGTTTATTAAATCAACAGTCCTAACAAC-AGAAAAATCTGTAA--AACAA-GACAA-ATCATCATGAC-CGC-AAATGCAATAATCTACCACTGACAAACCCTTGGTAGAAACAGATGTAAAATCGTTG-TTAGAAC-AATTTCTCCCATTTAACCATGTGACATTTTTGAGTTGA
gi|5 : ttgttAATGCAATCCCTCTAT-AAGA-AAGGGAGTCCTTTGGGT-CCGTAGTAGAA-AACTTGGGTATTGGGTT-A--ATGATACATTAACCCCA-AAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAACATGAA-GAAA--A-AGAATGGACGT-ATCATT---ACACAATACCTCACTTG-GAA-TATT-ATCAATACCACAAGCTTTAAC-TCGCTTT-GCATTTTAA---ATGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----ATGC---AAAT---TTGCAGT---------ATTACTATCATTCG---AGAAGTC-----T-----ACATGTC----AAT-GTGCC----T---GGTCAT----GT--CC---AT-TA----CTATTAT------T------GTAAA---ATAACG--TA-----CT--AAA--ATC---------AACTT---TTCAAAAC--ATCTGAAATAGATGTAGAAATAA-A---A---CCATCAT-----GA-AGTTT--AACTTCAAAAGGTAT---AC-ATTTAGAT-TTGTACTGGTTAACACCGATCTTACCGATTGACTTCCAGAA----CTTGGACTG-ATCGACATTAC-A-AT----CAA--T---AAGCAATTCATTTTGT----AAAAAAA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTTCAAACTT-GTACA-T--ATTCAGA-T-TTAAG-----ATT-TTT-T--------T----AACA--T----TTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----G-TCCATATTTCTG---ACAATCTCTCGGTCCACCATTGTTTACCAGGTCTACATCTTTTATTGTATTGAT-----TAG----------AC---TG-TATAGTTTTTAAGGGTATA-TGGTTATACAT----ATTATTCTTAACTATATTACACTAATCCT---GATAAAC-ACTATCGATATCATGTTGTGTTTG-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATCAG--A-CAGCACTTCTGTATTATTTAGAAAATAA-TCTGGTAATTTA-GTT--AAATCAAATTTATCATAAC-TATTA----CTAA-G--CGGTG---TATAAATATC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATAAAAGTTGGTG-----CAAGATAACTCAAATCAT---CTGAC-----CTGTTTATTAAATCCACAGTCCTAACAAT-TGAAAAATCTGTAA--AAC-GAGACAA-ATCATCATGAC-TGC-AAATGCAATAATCTACCACTGACAAACCCTTATTAGAAATAGATGTATAATCGTTGTTAAAAC--AATTTCTCCCATTTAA-CATAC-ACATATTGGTACTGA
gi|6 : tggct--AACCGTCATCGGTAT-T-AC-TTTTG--TCCTGTCATTTTTAATTCCGATTTGGCCAATTTCTTTCCAAAATTGATTTTGGTTT--TTATCATT-T-ACAT----TTT--C---TA-TATTTCTGCTTGT----ACGTTAA----ACCGGT-AACTACGTTTAGTCCTTTGCACCTATCTCTCAAA--ACGTTTTCTAGCA--GAACAAT--AA----A-T---AAC--TTTATT-TTTCTTCACA-A-TTTT-ATCA--A----TAC----ATT----TTAACCATTCTTT-TTTGG--T------TAAAC-AC--ACAT-T----ATTCCAAA-----G---TCAAATGTTTGCTCAACCATGGATTACCAGGTC---GCCTCTTAT--T-TTG-T-----AAA-------CATGA---TAATATGGGCTTGCAGGGTAGCGTAGCTA-ACAT----TTCCTCTTTAGCTAGGCTACATCAACCAT---TACATGC-ACTATCGTTATCA---T---CTTG-TGT--ACGAAAAC-C-TCCCTCCAAGTCTA-CAATAGACGTGTT----TAC--TGATGA-TAATA--T--ATATCTGACAGAAAGTCA-CGAGGTACATT--TGTA-ACATTAAATCCATCACA-------A----ATAA-ATTCGACT---T-T----------------AGACAGTTGGTAGTATGT----TTTATTATAGTGAAACTTATATTTAATATTCTAGCTTAAAATAGAGTGGTAGGGTAAACCAGATCGAGATAGAAA--ATTGCCTTTATTTT---ATTCC--------TTCACTAGCTCGGTTACTCTGATAATATGAGA---CT-CCGAAAATAATGATAACGTTTTTATGACTTACAAAAT--AATAGTCAACAACCGAAATGCCTTTAACAGACACAGAAGTGAAATC---ATTTAAAATGCATTTCGACCATTTAG-CATAC-ACATATAAGCGTTGATTGAAAAATCAATTAAATCATTCCCA-TACGCATTTTACTTAAAATC--CG-CATTATTATGACCTACTTA-CTCGTCAACACCAAAAATATAATCAG-CGGAATCAACACAGCTACTGTTAAAATATCTACATATATAAATAATACATGTTCCATCATTCTGATGCT------------TTAAAAGAGTTTCAAAATAGTTATGCACATCAACGCTAC--GACTT-----GAGTTCTCTGGTGGCAAATAGCG-----GTGGATAAATAACACTA---------TTAT---CAAGTTTTAACCATAAAATACATTTA--GTAGCATTATAACC--AATAGAAATGTCAAA-----TTTAGAACAAAGTAAATTTTGGATTAAAAACCCGACCCCATCAGACCCTGTTCTTGCTCTAATAT
gi|7 : gATACCTCTAT-ATGA-CATAGGATTTCTTGGAT-CTGTGTT-TCCTGACTTTGGTATAGGGCT-C--ATAATGCCTAGGCCCCA-GTC-AATCGGGATCATG-CCAGTATTAAAACACACATTAAATAATATATGTA-AAAT--AGAAAAAGCA-GT-GTAATTTTTA-AGTATTTC-AGAC-G-GTA-GAGT-GTCAAGACCACTGGCATTGTC-GCTCTTA-GCA-CTAAA---ACAGCCT---TAT---------------GTACG-TCT----TGAAGTGATATAT--------AAGAATT---AAAGCTTGATAT---AAA--------AGC---------G---------TT-----TG----T-----A-----AC----T----GACGGT-------TTAGA-TT-C-----A--TC---AT-TATC-ACCCTCCTG--G--TTA-GCTGTTACATTATACAGAT-------CTGAAAA--ACA--TGTTTTCCATTT--ATCCAAAACTGATTTTG--TA--TCC----CTTA-AGATA---TCACCATTGTCAGA-AACC----ACTTCTATAGGTAT-TAAT-TTCT---TTTTCTGAAAGGCTATACCAACGTTCCCACTAGATTTCCAAAA------------A-ATCTGAATTATAAGATTGAACAC--TTGAAAGCAGATCATTTTGC----AATTT-A----ACCAAT-AAAGTTGTTTCTCTTTTTGCACTTGTCTGTTAAATGTC--TTTTGAG-AC-G-ACA-TCAACTCATACC-TTAAC--CTTTTC-TTT-CACTTA-C-TTTGGTGCA--T----TG-----AAT----ATA--TAA--TTT-TTCGT--T------TG--T-AATTACTT-T----ATTCCATAGCTCAGTTTACAA---CAAGTTCCACCATGGTTTCTTAA--CTGTTTTTTTTTT--AATTA-TATAAACAAT---GTCCATAAGAGTA-TAC---TTTTGACGGTAAC-TTATCAAACAT----TTTCCGTTTAATCAACTTACA-CAATTATGAATATGA-C-ATTGT-AATATC---------TTGCTGAATTCAAAGGC-T-ATGTTCTAACTCT---AA-AACAGTATTATGCAATATTTGT-A-CAATA--TTAGTTCTA--CATAAAAT-A-TCAGACTTATTATTGCAAACATCAGTTTT----TACCGCATCAC---CTAAAG-CAGGTTGCGT-T-----TC-----------ACAGTTCA----AT-TCAGATGTA--------ACT-------TTGATATTCCAGGTAAGAATAGAGTGGTCTGG
gi|8 : tATGCAATCCCT-TATTAAGC-AAGGGG-TCCCTTGGGTTCAGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGATACATTTAACCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAACAAAACATG-A-AGAA--ATAAAACGGACGT-ACCATT---ACACAATACCTCACT-TTGAA-TATT-ATCAATACCACAAGCTTTACC-TCGCTTT-ACATTTTCA---ATGGCTTTTTTTTACTTAAAAAACAGAGTTATTATCATTAAAAGACAAATGTACAGTGTTACTATCATCCG-AGA-----AGTC---T--T---T---AAT---------G---------TAAA---TG----T-----------GC----CTGGTAAC-GT-------TC--A-TTAC----TA--TT---AT-T-------------------------GTAAA---ATAAAGA--A-----CT--AAATCATC--TTTC---CACTT--GACGAAAAC--ATCTGAAATA------GATGTAG-AAATAGATTCATCAT-----GA-AGTTT--AACTTCTAAAGGTAT---AC-ATTTAGAT-TTGTACTAGTTTAAACCGATCTTACCGATTGACTTCCAGAA----CTTGGACTG-ATCGACATTAC-A-AT----CAA--T---AAGTAATTCATTTTGTGAAGAGT--------ACCAAT-AAAAACGTTTCGACTTATGTACCTCACGATCAAGTAAT--TTACGAACTG-GTACA-T--ATTCAGA-T-TTAAG-----ATC-TTT-T---T----T----AACA--T----TTCGCTGAGTACACTTAAGTCACCTTCGTTCAGCAT------TA--C-TA--ACAT-A----AGTCTATATTTCTG---ACAATCTCTCGGTCCACAGCTGTTCACCAGGTCTACATCTTTTAT--TG-TG-T-----TGA
gi|8 : tggttgcttACTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCGATATCA---TGTGTTTG-TAA--T------------CCTCCAACT-TGTCAATAGCAATATT----AACATCAGTAAGCACT---TCTGT------------ATTA-TTTAGAAAATTA-GTT--AAATCAAATTTATCATAAA-TATTA----CTGA-GT--GGTG---T-T-----TCAGTATCA--CAAC-GCAAC----AT-G----TT-A--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGGatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|9 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagAACGGACGA-ATCATT---ACACAATACCTCACT-T-GTAATATT-ATCTATACAACAAGCTTTACA-TCGCTTT-GCATTTCCA---ATGCCCT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGGC---AAAT---T---TGC---------A------------G---TG----T----------------------AAC-G------------A-TTACCCGAGAAGTCTAAATGTAAATGTGCCTGGGCAGGTTCA-TTACTAGTATTGTAAAG--TAAAGAACT--AAA--ATCAGCTTTTC--ACTT--GTCCAAAAC--ATCTGAAATA--GAT-GTAGAAACAGA-A---CCCTCAT--T---A-ATTTT--AACTTCAAAAGGTATACGA--TTAC---ACCTGTACTGGTTTACACCTATCTTACCGACTGACTTCCAGAA----CTTTGACTG-ATTGACATTAT-A-AT----CAT--T---AAGTAATTGATTTTGT----A----AAGAGTACCAGTAAAAAATGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTACGAACTT-GTACATT---TTCAAA-T-TTAAG----AATTGTTT-TAA--A-A-T----TTCGCTT----TGT----AAT----CTTAGCTACCTCA-TTCGA--TTGGCAATA--C-TA--ACAT-C----AATCCACATTTCTG---GCAGTCTCTCGGTCCTTCACTGTTAATCAGGTCTATATATTTTAT--TG-TG-T-----TGATTAGA-CTG------TA-T---GTTTTAAAGGGTATT-AGGTTATACATATTATTC-TTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCAATATCATGTTGTGTTTG-TAA--CC-----C-TCGC--TCTAACT-TGTCAATAGCAATTAT----AACATCAGTGA-GCACG--TTTGTATTATCTAGAAAtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): ACAACAGGTAAAAATGAACATGTGTTGTTGACACATAATATAAATAAGAAAAACTGTTGGTTTTTTCACTTGTTTAGAATATGTTATTATTATTATTACTACTATTTCCTAAATCATCTACAATTTCCATTAGTATTAATGGTTAGTCTTGAATCCTAACACTTATCTTTCCAATTATTTCCAAAATGTTACATTTTTTTATATATATATTGAATGAAATATCCTTTTGTATTTTTAAC
Unaligned ( gi|20 ): GATTTTTAACATATCTTCATAAAATATTTTCGGCATCGAAAAAAATTAATACAAATAATTGTCTTTATTTTATGACATTTAAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 22222 22222222 222222222222222 11111 11111111 22222222222 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 11111 111 22222 11111 111 222 2222222222 22222 1111111111 1 1111 111111 4444444444444444444444444444444444 1 333333333 111111 11 11111 222222222222222 1111 1 444444 33333333333333333 1111 11 11111 33333333333333333333333333333333 22222222222222222222222222222222222 111111111 111 2222222 11 1 22 11 111 11 1111 333333 111 11 11 111 77777777777777 4444444 1 222 333333 1 1 11 1 1 1 11 11 222 6666666666666
lowQualScore : 1 1 4 4 2 4 1 777 777 1 9999 55555 66666 0 1 0 9 3 55 999 1 5 3 33333 3 1 22222222 0 55 3 1 77 9999 3 0 777 777 555555555555555 4 22222 0 44444444 00000000000 1 777 8888888 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 66 66 7777 0 777 0 66 22 66 55555 1 5555 555 11111 4 88888 0 22 666 44 333 3 11 1 1 22 1 1 8888888888 3 4 44 00000 8888 99 777 3 22 8888 9999999999 4 333 1 0 1 1 0 0 55 1 555 3 7777 1 1 4 4 777777 4 4 2222222222222222222222222222222222 2 0 1 2 1 777777777 55 55 55 555555 0 77 2 8888 88 0 1 1 1 33 1 11 0 55 88 4 11111 888888888888888 5 2 2 1 66 0 0000 1 22 1 1 9999 1 2 3 7 444444 4 11111111111111111 1 6666 1 9999 4 0 2 8 999 2 88 0 4 5 1 1 5 11 1 777 77777 33333333333333333333333333333333 3 99999999999999999999999999999999999 1 1 22 1 22 1 11 1 555555555 6 111 7777777 1 5 1 1 22 6 99 99 3 6 7 1 88 1 1 1 4 1 1 99 1 66 1 66 5 1 33 2 1 1 8 1 3 0 444 8 0 8 0 11 0 7777 1 3 0 0 1 0 3 444444 1 1 6 0 3 0 777777 1 222 3 0 11 0 11 444 8 00000000000000 1 3333333 7 7 7 3 6 7 333 7 888888 0 1 1 1 1 1 0 6 7 0 5 2 6 55 7 7 3 1 0 0 3 6 3 3 88 44 6 0 333 6 3333333333333 3
lowQualScore : . . . . . . . ... ... . .... ..... ..... . . . . . .. ... . . . ..... . . ........ . .. . . .. .... . . ... ... ............... . ..... . ........ ........... . ... ....... ............................................................................................................................................... .. .. .... . ... . .. .. .. ..... . .... ... ..... . ..... . .. ... .. ... . .. . . .. . . .......... . . .. ..... .... .. ... . .. .... .......... . ... . . . . . . .. . ... . .... . . . . ...... . . .................................. . . . . . ......... .. .. .. ...... . .. . .... .. . . . . .. . .. . .. .. . ..... ............... . . . . .. . .... . .. . . .... . . . . ...... . ................. . .... . .... . . . . ... . .. . . . . . . .. . ... ..... ................................ . ................................... . . .. . .. . .. . ......... . ... ....... . . . . .. . .. .. . . . . .. . . . . . . .. . .. . .. . . .. . . . . . . . ... . . . . .. . .... . . . . . . . ...... . . . . . . ...... . ... . . .. . .. ... . .............. . ....... . . . . . . ... . ...... . . . . . . . . . . . . . .. . . . . . . . . . . .. .. . . ... . ............. .
lowQualScore : 1 0 0 0 3 0 0 555 555 0 6666 66666 44444 8 0 5 1 6 00 999 8 9 3 00000 5 8 11111111 1 66 6 0 88 0000 6 8 000 000 000000000000000 0 22222 8 55555555 00000000000 0 000 9999999 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 11 11 1111 9 666 9 11 77 11 44444 0 3333 666 99999 4 66666 7 44 999 33 555 2 66 0 2 66 0 4 1111111111 2 0 00 55555 5555 55 000 0 22 5555 7777777777 0 333 0 7 0 4 6 8 55 0 222 2 1111 0 6 0 0 111111 0 0 8888888888888888888888888888888888 5 8 4 0 4 999999999 55 44 55 111111 9 33 4 0000 11 7 0 0 2 11 4 99 8 55 88 4 11111 222222222222222 0 0 8 4 11 4 6666 8 99 3 9 4444 3 7 3 3 333333 4 66666666666666666 1 0000 7 4444 4 7 4 9 777 6 66 9 5 0 1 0 0 99 1 111 00000 00000000000000000000000000000000 9 88888888888888888888888888888888888 0 0 88 0 00 0 88 7 666666666 3 777 5555555 0 2 0 0 00 7 77 22 5 7 3 7 88 0 0 0 0 7 0 33 9 00 0 44 7 7 66 7 4 4 0 0 8 8 000 0 6 0 8 00 8 0000 4 2 6 8 0 6 2 000000 4 0 0 8 8 6 444444 4 444 2 8 00 8 22 000 0 00000000000000 0 3333333 3 3 3 3 7 3 333 3 333333 7 0 0 0 0 0 7 7 3 0 5 5 7 77 3 3 3 0 7 7 3 7 7 3 33 00 7 7 333 7 3333333333333 7
consensus : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAAC--ATCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCCAGAATT--CTTNGACTG-ATCGNCATTAT-ATAT----CAT--T---AAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--TTAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
Reference ( family-173 ) : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAAC--ATCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCCAGAATT--CTTTGACTG-ATCGNCATTAT-ATAT----CAT--T---AAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--TTAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|1 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGTCGG-AGCTTGACTTAGGTATAGGATTTATCATAATAGATTTACCC-A-TAA-AGATGGAATAAAA-CCTGTATTAAAACAAAAATTAAAAAGAACATGTT-AAAC--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTATTTAGCATTTTCA---ATAGCTT---ATT---------------TTACT-TCT----TGAATAGATATAT--------GCTCATC---CAA-----AATA---AAAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GGATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCATTTTTACTTAAAAC--ATCCTTAAC--ATCT-GAAGTGA-AGCTA---CCATCAT--CCAAA-AGT-----ACCTCCATTGGAAT-TGAC-CTTT---TCTTGTTATTATGTATGCCTAGTTTACCAATAGTTTTCCAGAATT--CTTCG---G-ATCATTATT-T-ATAT----CAT--T---TAATATTTCATCTTGT----ATTTTAT----ACTAAT-GTTGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTTAT-TTT-TAGATATA-T----ACCA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAT-A----GTTCCATAAATGAG---TCAAAGTATTACTCCACCAAGGCTTTCCAA---CGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACATACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACTAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----TACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTGATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACTAATATT---ATTAC---AAAGGTTGACAGCATCAACAGCACGGACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCGTGATTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGATATAGATGTAAAATCATTGTTTATAA--AA------CCATTAAG-GATAC-ACATATAAGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTAGTCTTTAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGATGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGTATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CGAGAACAGATATGTTATAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTTCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAGAT-ATATATATGTTTGCGATTGTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACACAAAATTATAACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGTGAACCATGTAATGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATTAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGAAATTGACGGTTGTTCTTTAATGAAGACTTATGGGACATTACCT-TAATTTTATCGGCACTATATTTCAACTTAGCGATTACCACACC-GACTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAAACAGAATTAATTTTCAGGCTAT---GTGAAATAAGTGAGTTGA--------T----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|10 : tgatTGTGATACCCCTGT-AAGA-CATAGGGTCACGTGGAT-CATTATTAGCA-GATTTAAGGATAGGGTT-A--ATGATACCCATACCCCA-TTC-TGAGAGAATAATT-CCGGTGTTAAAACAAACATTAAATAGTACATGTA-AAAACGAGATAGC---TGT-ATCATTTTTA-AAAATTTC-TATA-G-GTA-GATC-ATCTATACCGCACGCCTTACCATC-CTTC-GAATTAAAA---ACAGCTT---TAC---------------GTATT-TCA----AAAATAG---TAA--------TATCATTTTCAAATTC--AGGCACAAAAT---C---ACT---------A---------TT-----TA----T-----TGAAGCAG----C----AAC-A------------G-GTAA----AA--T------------GTTGTTATG--TGATGACGCATTA----TATAAA--TTA-----GA--AAA--ACT--GTTTTTCCATTT--ATTAAGAAC--ATATTCAGT--ATT-----GTTA---TTA---ATATTTT--CCATATCGTCTACAACTTCCATTGGTA--TAATATTTT---TCTTTTGAAAACCAACACCTATCTTTCCAATACTTTTCCAAAAAT--TT---ACAGAATTTTTATCA--ATAT----C-TGAT---AAG-AAGTCATTTTGT----ATTTTAA----ACCAAT-ATATTCGTTTAGATTTTTGAACCTCTCTATTAAA-ACC--TTTTCTGCATCGTAAAA---AGTTA-A-TACGAAGAATTTTCT-TTT-GAAAT--A-T----GTTA--TGAC----ATT----TCAAGTACCCTTT-TTC-----------TG--CAAA--ACAT-ACTTTATTCCATAAATCTG---ACAGATATTCGTTCCACCAAGGTTTACCAATTTTCCTACCTTTAT--Ttgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|11 : gctatG-CACCAA-AATGGTTTGGAAGTTACTGGCCATCAACTGATCTGCTGGGGATTGATCAAGGTGTATGTAGACGTTCTCATACTGTTTGCTAGTCTTCAGT-----TTTGG----C-TT--CTGTATCATGATCGTCGTTGGTCATGAATTTAGCAATTACAACGCCCGGTT----TGCCATCACTGGTAGAGTTCTTGCGCTGAGCACTGGCGCACA-CAACATCACTCACTCGGAGACCGTCGCGT---ATAAGAGAGTTCACCATGTTGC----TGACATTCTCATTTGCATTCTCTGGAAGGCCTCTAAg
gi|12 : ATATATAAAAGG--------CCTTCATTCTGGTATTTATAAATATCTGTTAAAAGAGTACCATAAAAA------GCAGTTACATCAAAAGACCTTGAAGAATTTTCAGGTGGTAAATAACAAACACATGGCAA-----------------CCTTATGATTAAACTTCAACCATAGAAATCCTTCAAACGAGT-TT-T--CTAAAATGGATATATCAAATTCATTAA---ATAAT-T-CGTTCTTGACAAAGAAACCAACTCCACCAGAACCGGCTCTAGCATTTTTATGTA---TAAC-------TTTTCGGTTCAAACCAAACCATGTATAACCTTCTAAGGTCAATTTGT-GT---TCATGAAAT---AGATGAGTTTCTGCTTATG-CTAAAATATCAATATC---AGAATTAAAAACACATAATGATCTTAAATTAAAATTGTC------AGATTCACAGTCAACACTCCAGTCACGGACGTTCCAAAACTCGGCttaatacattaagagggatctcagactgttgatgatgtgggccattggtgacaatagattcaagttttgcactcatttcgttaagttcctctgctacttcaactttgatgggatctttaaaagagtctaacttaagatcaatatccttacggacacgactcatttcagagttgacacgcttgtctaacaattgggcaaatttatttgatattctctactcgaggcttgattcaagtttgtccctgcattccttaacggaagagaacagtatgtgcatgtcagcag
gi|14 : atAATGCAACCCCTCTGT-AAGA-AAGGGGGTCTCTTGGGT-CCGTAACAGATT-ACTTGGGTATTGTGTT-A--ATGATACATTTACCCCA-GGT-ATATGGAACTGTG-CCAT--TTAAA------ATTTAATAAAACATG-A-AGAA--ATAAAACGGGCGT-ATCATT--------ACA---------------------CAATACC-------TCAC------TTT-GCATTTTCA---ATGGCTT---CTT---------------TAACT-TCA----AAAACAGAGATAT--------TATCATT---AAA-----AGGC---AAAT---T---TGT---------G------------G---TG----T-----T-----Atgacagctaagtacgattactcttacctcggatgttttgccctcagttgttgttgcgacgtccattagtattgttgctataacttagtcccgctctggtccacctaacactac
gi|15 : AGTGCCAGACCTCGAT-ATGA-AAGATGATATCTTACAT-TATCCG-AACCTGACTTAGGAATAGGATT-T--ACGATA---TTATTCTAAGATCATATGCAACT------AATATCAAAACATATGTAAAAAAATATATGTA-AAAC--A---AGTAGACGT-ATGTTTTTTT-AAAACATC-AATT-G-GTA-TGTT-TTCTCCACTAATCGTTTTATC-CTTCTTT-GC
gi|16 : gattatgcaAT-----CC-GTA--G--ATATATTTGC----AT-T----ATCA--------ACA-------TTCATACACCA-AGTAAGAGTTAATGATCCGCAATACCAGTTGGAA-----Cca
gi|17 : caatatccgtgtgggaacgaagactgccatccgtgatgatgtctgcacttgcgttaaaatgtcagggtcgggaacgaatgggtcaggaatgatacgtgcaaaatcgaacacgttttcagttgtttcttatacataagaTTTAGTAGAAATAGATGTATAATCGTTGTT-AGAAC-AATTTCTCCCATTTTA-CATAC-ACAT---------GATAAGAAAATCTGTAAAAAGCTCACCATAATG-ATTTGTTTTAAAATCGATAACATCCCGTTCA-ATA---ATATCACCAACGCCGATAATAAAATCGTCCATT-TCGCCACATCTACTATTGAA--GTCGTCATATATA
gi|18 : TAAAATAAACATTAACATGTACATGTA-AAAA--AT------GACATAATTTTTTTTA-AAAA-ATG-CA---G-ATA--ATTCATCGATACCACATGCCTTACC-ATTTTTC-GAA---TCAAAGACAGCTT---TAC---------------GTATT-TC-----AAAATAG---TAA--------TGTCATT------------GTC---AAAT---T---
gi|19 : taATGCAATGCTTCTGT-AAGGCAAGCGGG-CTATTTGAT-CTGTAATAGAA-GATTTGGGTATTGGAAT-G--ATTATACACCTACCAAT-AAT-AAATGGAACATTT-CCATTTGAAAAACAAATATTAAACAAACAATGAAGAAAA--AT-CAAC-AAGGT-ATTAcaggtacaaaaatattatacaa
gi|2 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGGCGG-AGCTTGACTTAGGTATAGGATT-T--ATAATAGATTTACCCCA-TAA-AGATGGAA-TACAACCTTTATTAAAACAAACATTAAAAAGAACATGTA-AAAA--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTTTTA-GCATTTTCA---ATAGCTT---TTT---------------TTACT-TCT----AGAATAGATATAT--------GCTCATC---CAA-----AATA---AAAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GAATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCACTT--ACTTAAAAC--ATCCTTAAC--ATCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG-----AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCCAGAATT--CTTT--CGG-ATCATTATT-T-ATAT----CAT--T---TAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCTAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGTTAA-CAATA--CCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTAATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTCAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T--T-------TTTGCGATTATTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGACCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCATTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTTGCCGTGTTCCAGCTGTGTTGGCTCTGTCTGTTTGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTGTGAAACCGATCCCGTAGAAGCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGATAGCCGTTATCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGATTATTCTTTAATGAAGACTTGGAAGACATTACCT-TACTTTTATCGGCACTAGATTTCAACTTAGCGATTACCACACC-GGCTCTACTGTTATTATTTG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAGACAGAATTAATTTTCAGGCCAT---GTGAAATAAGTGAGTTGACC---TT-CTCATCCAGATTTTCGTTGACACTTTCGGGGAGATTTCTAAc
gi|21 : CAACACGTGTATCAT-TAGTGATAATT-ACCACCGCAGTTGATGGACATGAA-GAT--TTTT
gi|3 : T--ATA--ATC--TTTCTCCCATTT--ACTTAAAAC--ATCCTTAAC--ATCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG-----AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCCAGAATT--CTTT--CGG-ATCATTATT-T-ATAT----CAT--T---TAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATAAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATATTAATACTGAATGATCTGGAATACCTGCTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAACATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCCACGTGACGGAAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGT
gi|4 : AATGCAATCCCTCTTT-AAGA-AAGGGGGTCCCTTGGGT-CCGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGACACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAGCGTG-A-AGAA--ATAAAATGGACGG-TTCATTACAC-AGAACCTC--ACTTG-GGA-TATT-ATCAATATCACAAGCTTTACC-TCGTTTT-GCATTTTCA---ACGGCTT---TTT---------------TCACT-TCA----AAAACAGATATAT--------TATCATT---GAA-----AGAC---AGATTTAT---AGTGTTACTATCA---------TCCGAAATG----TCTGAAT-----GC----A----AAT-GTATCTGAGC---A-TGTC----CA--TC---AC-TG---GTT-TTATG--AAAT-A-AC----GA------------A-----CT--AAA--GTC--AATTTTCCACTT--GTTCAAAAC--ATCTGAAAC--A----AAAGTCG-AAATAGAGCCATCAT-----GA-AGTTT--AACTTCAAAAGGTAT---AC-ATTTAG-TTTTATACTTGTTTACACCGATCTTACCGATAGACTTCCAGAA----CTTGGACTG-ATCAACATTAC-A-AT----CAT--T---AAGTAATTCATTTTTT----AAAGAGA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGGTCAAATAAT--TTACGAACTT-GTACA-T--ATTCAGA-T-TTAAG--ATC-TT-TTC-T-GACA-T-T-----TCG--TTG-----AGTACACTTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----GT-CCACATTTCTG---ATAATCTCTCGGTCCACCACTGTTTACCAGGTCTACATCTTTTAT--T-CTG-T-----TGAT------TAGAC---TG-TATAGTTTTAAAGGGTATT-TGATTATACAT----ATTATTCTTAACTATACTACACCAATCTT---GATAAAC-ACTATCGATATCATGTTGTGTTTA-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATTAGTAAGCACT---TCTGTATTATTTAG-AAATGAGTCTGGTAATTTA-GTT--AAATTAAATTTATCATAAC-TACTACTTTGTAGTGTTTCGTT-----T-----TC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGG-------------TGCAAGAAAATTCAAATCACCTGACCTGTTTATTAAATCAACAGTCCTAACAAC-AGAAAAATCTGTAA--AACAA-GACAA-ATCATCATGAC-CGC-AAATGCAATAATCTACCACTGACAAACCCTTGGTAGAAACAGATGTAAAATCGTTG-TTAGAAC-AATTTCTCCCATTTAACCATGTGACATTTTTGAGTTGA
gi|5 : ttgttAATGCAATCCCTCTAT-AAGA-AAGGGAGTCCTTTGGGT-CCGTAGTAGAA-AACTTGGGTATTGGGTT-A--ATGATACATTAACCCCA-AAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAACATGAA-GAAA--A-AGAATGGACGT-ATCATT---ACACAATACCTCACTTG-GAA-TATT-ATCAATACCACAAGCTTTAAC-TCGCTTT-GCATTTTAA---ATGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----ATGC---AAAT---TTGCAGT---------ATTACTATCATTCG---AGAAGTC-----T-----ACATGTC----AAT-GTGCC----T---GGTCAT----GT--CC---AT-TA----CTATTAT------T------GTAAA---ATAACG--TA-----CT--AAA--AT---------CAACTT---TTCAAAAC--ATCTGAAATAGATGTAGAAATAA-A---A---CCATCAT-----GA-AGTTT--AACTTCAAAAGGTAT---AC-ATTTAGAT-TTGTACTGGTTAACACCGATCTTACCGATTGACTTCCAGAA----CTTGGACTG-ATCGACATTAC-A-AT----CAA--T---AAGCAATTCATTTTGT----AAAAAAA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTTCAAACTT-GTACA-T--ATTCAGA-T-TTAAG-----ATT-TTT-T--------T----AACA--TTTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----G-TCCATATTTCTG---ACAATCTCTCGGTCCACCATTGTTTACCAGGTCTACATCTTTTATTGTATTGAT-----TAG----------AC---TG-TATAGTTTTTAAGGGTATA-TGGTTATACAT----ATTATTCTTAACTATATTACACTAATCCT---GATAAAC-ACTATCGATATCATGTTGTGTTTG-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATCAG--A-CAGCACTTCTGTATTATTTAGAAAATAA-TCTGGTAATTTA-GTT--AAATCAAATTTATCATAAC-TATTA----CTAA-G--CGGTG---TATAAATATC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATAAAAGTTGGTG-----CAAGATAACTCAAATCAT---CTGAC-----CTGTTTATTAAATCCACAGTCCTAACAAT-TGAAAAATCTGTAA--AAC-GAGACAA-ATCATCATGAC-TGC-AAATGCAATAATCTACCACTGACAAACCCTTATTAGAAATAGATGTATAATCGTTGTTAAAAC--AATTTCTCCCATTTAA-CATAC-ACATATTGGTACTGA
gi|6 : tggct--AACCGTCATCGGTAT-T-AC-TTTTG--TCCTGTCATTTTTAATTCCGATTTGGCCAATTTCTTTCCAAAATTGATTTTGGTTT--TTATCATT-T-ACAT----TTTC-T---A--TATTTCTGCTTGT----ACGTTAA----ACCGGT-AACTACGTTTAGTCCTTTGCACCTATCTCTCAAA--ACGTTTTCTAGCA--GAACAAT--AA----A-T---AAC--TTTATT-TTTCTTCACA-A-TTTT-ATCA--ATAC----ATT----TTAACCATTCTTT-TTTGG--T------TAAAC-AC--ACAT-T----ATTCCAAA-----G---TCAAATGTTTGCTCAACCATGGATTACCAGGTC---GCCTCTTAT--T-TTG-T-----AAA-------CATGA---TAATATGGGCTTGCAGGGTAGCGTAGCTA-ACAT----TTCCTCTTTAGCTAGGCTACATCAACCAT---TACATGC-ACTATCGTTATCA---T---CTTG-TGT--ACGAAAAC-C-TCCCTCCAAGTCTA-CAATAGACGTGTT----TAC--TGATGA-TAATA--T--ATATCTGACAGAAAGTCA-CGAGGTACATT--TGTA-ACATTAAATCCATCACA-------A----ATAA-ATTCGACT---T-T----------------AGACAGTTGGTAGTATGT----TTTATTATAGTGAAACTTATATTTAATATTCTAGCTTAAAATAGAGTGGTAGGGTAAACCAGATCGAGATAGAAA--ATTGCCTTTATTTT---ATTCC--------TTCACTAGCTCGGTTACTCTGATAATATGAGA---CT-CCGAAAATAATGATAACGTTTTTATGACTTACAAAAT--AATAGTCAACAACCGAAATGCCTTTAACAGACACAGAAGTGAAATC---ATTTAAAATGCATTTCGACCATTTAG-CATAC-ACATATAAGCGTTGATTGAAAAATCAATTAAATCATTCCCA-TACGCATTTTACTTAAAATC--CG-CATTATTATGACCTACTTA-CTCGTCAACACCAAAAATATAATCAG-CGGAATCAACACAGCTACTGTTAAAATATCTACATATATAAATAATACATGTTCCATCATTCTGATGCT------------TTAAAAGAGTTTCAAAATAGTTATGCACATCAACGCTAC--GACTT----GAGTTCTCTGGTGGCAAATAGCG-----GTGGATAAATAACACTA---------TTAT---CAAGTTTTAACCATAAAATACATTTA--GTAGCATTATAACC--AATAGAAATGTCAAA-----TTTAGAACAAAGTAAATTTTGGATTAAAAACCCGACCCCATCAGACCCTGTTCTTGCTCTAATAT
gi|7 : gATACCTCTAT-ATGA-CATAGGATTTCTTGGAT-CTGTGTT-TCCTGACTTTGGTATAGGGCT-C--ATAATGCCTAGGCCCCA-GTC-AATCGGGATCATG-CCAGTATTAAAACACACATTAAATAATATATGTA-AAAT--AGAAAAAGCA-GT-GTAATTTTTA-AGTATTTC-AGAC-G-GTA-GAGT-GTCAAGACCACTGGCATTGTC-GCTCTTA-GCA-CTAAA---ACAGCCT---TAT---------------GTACG-TCT----TGAAGTGATATAT--------AAGAATT---AAAGCTTGATAT---AAA--------AGC---------G---------TT-----TG----T-----A-----AC----T----GACGGT-------TTAGA-TT-C-----A--TC---AT-TATC-ACCCTCCTG--G--TTA-GCTGTTACATTATACAGAT-------CTGAAAA--ACA--TGTTTTCCATTT--ATCCAAAACTGATTTTG--T--ATCC----CTTA-AGATA---TCACCATTGTCAGA-AACC----ACTTCTATAGGTAT-TAAT-TTCT---TTTTCTGAAAGGCTATACCAACGTTCCCACTAGATTTCCAAAA------------A-ATCTGAATTATAAGATTGAACAC--TTGAAAGCAGATCATTTTGC----AATTT-A----ACCAAT-AAAGTTGTTTCTCTTTTTGCACTTGTCTGTTAAATGTC--TTTTGAG-AC-G-ACA-TCAACTCATACC-TTAAC--CTTTTC-TTT-CACTTA-C-TTTGGTGCA--TTG-----AAT----ATA--TAA--TTT-TTCGT--T------TG--T-AATTACTT-T----ATTCCATAGCTCAGTTTACAA---CAAGTTCCACCATGGTTTCTTAA--CTGTTTTTTTTTT--AATTA-TATAAACAAT---GTCCATAAGAGTA-TAC---TTTTGACGGTAAC-TTATCAAACAT----TTTCCGTTTAATCAACTTACA-CAATTATGAATATGA-C-ATTGT-AATATC---------TTGCTGAATTCAAAGGC-T-ATGTTCTAACTCT---AA-AACAGTATTATGCAATATTTGT-A-CAATA--TTAGTTCTA--CATAAAAT-A-TCAGACTTATTATTGCAAACATCAGTTTT----TACCGCATCAC---CTAAAG-CAGGTTGCGT-T-----TC-----------ACAGTTCA----AT-TCAGATGTA--------ACT-------TTGATATTCCAGGTAAGAATAGAGTGGTCTGG
gi|8 : tATGCAATCCCT-TATTAAGC-AAGGGG-TCCCTTGGGTTCAGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGATACATTTAACCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAACAAAACATG-A-AGAA--ATAAAACGGACGT-ACCATT---ACACAATACCTCACT-TTGAA-TATT-ATCAATACCACAAGCTTTACC-TCGCTTT-ACATTTTCA---ATGGCTTTTTTTTACTTAAAAAACAGAGTTATTATCATTAAAAGACAAATGTACAGTGTTACTATCATCCG-AGA-----AGTC---T--T---T---AAT---------G---------TAAA---TG----T-----------GC----CTGGTAAC-GT-------TC--A-TTAC----TA--TT---AT-T-------------------------GTAAA---ATAAAGA--A-----CT--AAATCATC--TTTC---CACTT--GACGAAAAC--ATCTGAAAT--A----GATGTAG-AAATAGATTCATCAT-----GA-AGTTT--AACTTCTAAAGGTAT---AC-ATTTAGAT-TTGTACTAGTTTAAACCGATCTTACCGATTGACTTCCAGAA----CTTGGACTG-ATCGACATTAC-A-AT----CAA--T---AAGTAATTCATTTTGTGAAGAGT--------ACCAAT-AAAAACGTTTCGACTTATGTACCTCACGATCAAGTAAT--TTACGAACTG-GTACA-T--ATTCAGA-T-TTAAG-----ATC-TTT-T---T----T----AACA--TTTCGCTGAGTACACTTAAGTCACCTTCGTTCAGCAT------TA--C-TA--ACAT-A----AGTCTATATTTCTG---ACAATCTCTCGGTCCACAGCTGTTCACCAGGTCTACATCTTTTAT--TG-TG-T-----TGA
gi|8 : tggttgcttACTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCGATATCA---TGTGTTTG-TAA--T------------CCTCCAACT-TGTCAATAGCAATATT----AACATCAGTAAGCACT---TCTGT------------ATTA-TTTAGAAAATTA-GTT--AAATCAAATTTATCATAAA-TATTA----CTGA-GT--GGTG---T-T-----TCAGTATCA--CAAC-GCAAC----AT-G----TT-A--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGGatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|9 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagAACGGACGA-ATCATT---ACACAATACCTCACT-T-GTAATATT-ATCTATACAACAAGCTTTACA-TCGCTTT-GCATTTCCA---ATGCCCT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGGC---AAAT---T---TGC---------A------------G---TG----T----------------------AAC-G------------A-TTACCCGAGAAGTCTAAATGTAAATGTGCCTGGGCAGGTTCA-TTACTAGTATTGTAAAG--TAAAGAACT--AAA--ATCAGCTTTTC--ACTT--GTCCAAAAC--ATCTGAAAT--AGAT-GTAGAAACAGA-A---CCCTCAT--T---A-ATTTT--AACTTCAAAAGGTATACGA--TTAC---ACCTGTACTGGTTTACACCTATCTTACCGACTGACTTCCAGAA----CTTTGACTG-ATTGACATTAT-A-AT----CAT--T---AAGTAATTGATTTTGT----A----AAGAGTACCAGTAAAAAATGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTACGAACTT-GTACATT---TTCAAA-T-TTAAG----AATTGTTT-TAA--A-A-T----TTCGCTTTGT----AAT----CTTAGCTACCTCA-TTCGA--TTGGCAATA--C-TA--ACAT-C----AATCCACATTTCTG---GCAGTCTCTCGGTCCTTCACTGTTAATCAGGTCTATATATTTTAT--TG-TG-T-----TGATTAGA-CTG------TA-T---GTTTTAAAGGGTATT-AGGTTATACATATTATTC-TTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCAATATCATGTTGTGTTTG-TAA--CC-----C-TCGC--TCTAACT-TGTCAATAGCAATTAT----AACATCAGTGA-GCACG--TTTGTATTATCTAGAAAtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): ACAACAGGTAAAAATGAACATGTGTTGTTGACACATAATATAAATAAGAAAAACTGTTGGTTTTTTCACTTGTTTAGAATATGTTATTATTATTATTACTACTATTTCCTAAATCATCTACAATTTCCATTAGTATTAATGGTTAGTCTTGAATCCTAACACTTATCTTTCCAATTATTTCCAAAATGTTACATTTTTTTATATATATATTGAATGAAATATCCTTTTGTATTTTTAAC
Unaligned ( gi|20 ): GATTTTTAACATATCTTCATAAAATATTTTCGGCATCGAAAAAAATTAATACAAATAATTGTCTTTATTTTATGACATTTAAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 22222 22222222 222222222222222 11111 11111111 22222222222 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 2222222 111 22222 11111 111 222 11111111 1111 2222 111 1111111111 1 1111 111111 4444444444444444444444444444444444 1 333333333 111111 11 11111 222222222222222 1111 1 444444 33333333333333333 1111 11 11111 33333333333333333333333333333333 22222222222222222222222222222222222 111111111 111 2222222 11 1 22 11 111 11 1111 5555555 111 11 11 111 77777777777777 4444444 1 222 333333 1 1 11 1 1 1 11 11 222 6666666666666
lowQualScore : 1 1 4 4 2 4 1 777 777 1 9999 55555 66666 0 1 0 9 3 55 999 1 5 3 33333 3 1 22222222 0 55 3 1 77 9999 3 0 777 777 555555555555555 4 22222 0 44444444 00000000000 1 777 8888888 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 66 66 999 22 777 0 66 22 1111111 1 5555 555 11111 4 88888 0 22 666 44 333 3 11 1 1 22 1 1 44444444 9999 777 0 4 44 6666 000 3 22 8888 9999999999 4 333 1 0 1 1 0 0 55 1 555 3 7777 1 1 4 4 777777 4 4 2222222222222222222222222222222222 2 0 1 2 1 777777777 55 55 55 555555 0 77 2 8888 88 0 1 1 1 33 1 11 0 55 88 4 11111 888888888888888 5 2 2 1 66 0 0000 1 22 1 1 9999 1 2 3 7 444444 4 11111111111111111 1 6666 1 9999 4 0 2 8 999 2 88 0 4 5 1 1 5 11 1 777 77777 33333333333333333333333333333333 3 99999999999999999999999999999999999 1 1 22 1 22 1 11 1 555555555 6 111 7777777 1 5 1 1 22 6 99 99 3 6 7 1 88 1 1 1 4 1 1 99 1 66 1 66 5 1 33 2 1 1 8 1 3 0 444 8 0 8 0 11 0 7777 1 3 0 11 3 1111111 1 1 6 0 3 0 777777 1 222 3 0 11 0 11 444 8 00000000000000 1 3333333 7 7 7 3 6 7 333 7 888888 0 1 1 1 1 1 0 6 7 0 5 2 6 55 7 7 3 1 0 0 3 6 3 3 88 44 6 0 333 6 3333333333333 3
lowQualScore : . . . . . . . ... ... . .... ..... ..... . . . . . .. ... . . . ..... . . ........ . .. . . .. .... . . ... ... ............... . ..... . ........ ........... . ... ....... ............................................................................................................................................... .. .. ... .. ... . .. .. ....... . .... ... ..... . ..... . .. ... .. ... . .. . . .. . . ........ .... ... . . .. .... ... . .. .... .......... . ... . . . . . . .. . ... . .... . . . . ...... . . .................................. . . . . . ......... .. .. .. ...... . .. . .... .. . . . . .. . .. . .. .. . ..... ............... . . . . .. . .... . .. . . .... . . . . ...... . ................. . .... . .... . . . . ... . .. . . . . . . .. . ... ..... ................................ . ................................... . . .. . .. . .. . ......... . ... ....... . . . . .. . .. .. . . . . .. . . . . . . .. . .. . .. . . .. . . . . . . . ... . . . . .. . .... . . . .. . ....... . . . . . . ...... . ... . . .. . .. ... . .............. . ....... . . . . . . ... . ...... . . . . . . . . . . . . . .. . . . . . . . . . . .. .. . . ... . ............. .
lowQualScore : 1 0 0 0 3 0 0 555 555 0 6666 66666 44444 8 0 5 1 6 00 999 8 9 3 00000 5 8 11111111 1 66 6 0 88 0000 6 8 000 000 000000000000000 0 22222 8 55555555 00000000000 0 000 9999999 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 11 11 888 00 666 9 11 77 6666666 0 3333 666 99999 4 66666 7 44 999 33 555 2 66 0 2 66 0 4 55555555 3333 111 8 0 00 2222 666 0 22 5555 7777777777 0 333 0 7 0 4 6 8 55 0 222 2 1111 0 6 0 0 111111 0 0 8888888888888888888888888888888888 5 8 4 0 4 999999999 55 44 55 111111 9 33 4 0000 11 7 0 0 2 11 4 99 8 55 88 4 11111 222222222222222 0 0 8 4 11 4 6666 8 99 3 9 4444 3 7 3 3 333333 4 66666666666666666 1 0000 7 4444 4 7 4 9 777 6 66 9 5 0 1 0 0 99 1 111 00000 00000000000000000000000000000000 9 88888888888888888888888888888888888 0 0 88 0 00 0 88 7 666666666 3 777 5555555 0 2 0 0 00 7 77 22 5 7 3 7 88 0 0 0 0 7 0 33 9 00 0 44 7 7 66 7 4 4 0 0 8 8 000 0 6 0 8 00 8 0000 4 2 6 88 2 4444444 4 0 0 8 8 6 444444 4 444 2 8 00 8 22 000 0 00000000000000 0 3333333 3 3 3 3 7 3 333 3 333333 7 0 0 0 0 0 7 7 3 0 5 5 7 77 3 3 3 0 7 7 3 7 7 3 33 00 7 7 333 7 3333333333333 7
consensus : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCCA--------GAATT--CTTNGACTG-ATCGNCATTATATATCAT--TAAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--TTAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTC--TCTAGTGTTAT--CTAGAACAGATATATTAAA-CCACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
Reference ( family-173 ) : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCCA--------GAATT--CTTNGACTG-ATCGNCATTATATATCAT--TAAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--TTAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T-----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTC--TCTAGTGTTAT--CTAGAACAGATATATTAAA-CCACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|1 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGTCGG-AGCTTGACTTAGGTATAGGATTTATCATAATAGATTTACCC-A-TAA-AGATGGAATAAAA-CCTGTATTAAAACAAAAATTAAAAAGAACATGTT-AAAC--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTATTTAGCATTTTCA---ATAGCTT---ATT---------------TTACT-TCT----TGAATAGATATAT--------GCTCATC---CAA-----AATA---AAAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GGATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCATTTTTACTTAAAAC--ATCCTTAACA--TCT-GAAGTGA-AGCTA---CCATCAT--CCAAA-AGT-----ACCTCCATTGGAAT-TGAC-CTTT---TCTTGTTATTATGTATGCCTAGTTTACCAATAGTTTTCCA--------GAATT--CTTCG---G-ATCATTATT-TATATCAT--TTAATATTTCATCTTGT----ATTTTAT----ACTAAT-GTTGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTTAT-TTT-TAGATATA-T----ACCA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAT-A----GTTCCATAAATGAG---TCAAAGTATTACTCCACCAAGGCTTTCCAA---CGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACATACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACTAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----TACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTGATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACTAATATT---ATTAC---AAAGGTTGACAGCATCAACAGCACGGACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCGTGATTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGATATAGATGTAAAATCATTGTTTATAA--AA------CCATTAAG-GATAC-ACATATAAGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTAGTCTTTAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGATGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGTATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTC--TCTAGTGTTAT--CGAGAACAGATATGTTATA-CCACTTT---ACAATGT-CATTGCGAATAAAAAGTTCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAGAT-ATATATATGTTTGCGATTGTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACACAAAATTATAACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGTGAACCATGTAATGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATTAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGAAATTGACGGTTGTTCTTTAATGAAGACTTATGGGACATTACCT-TAATTTTATCGGCACTATATTTCAACTTAGCGATTACCACACC-GACTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAAACAGAATTAATTTTCAGGCTAT---GTGAAATAAGTGAGTTGA--------T----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|10 : tgatTGTGATACCCCTGT-AAGA-CATAGGGTCACGTGGAT-CATTATTAGCA-GATTTAAGGATAGGGTT-A--ATGATACCCATACCCCA-TTC-TGAGAGAATAATT-CCGGTGTTAAAACAAACATTAAATAGTACATGTA-AAAACGAGATAGC---TGT-ATCATTTTTA-AAAATTTC-TATA-G-GTA-GATC-ATCTATACCGCACGCCTTACCATC-CTTC-GAATTAAAA---ACAGCTT---TAC---------------GTATT-TCA----AAAATAG---TAA--------TATCATTTTCAAATTC--AGGCACAAAAT---C---ACT---------A---------TT-----TA----T-----TGAAGCAG----C----AAC-A------------G-GTAA----AA--T------------GTTGTTATG--TGATGACGCATTA----TATAAA--TTA-----GA--AAA--ACT--GTTTTTCCATTT--ATTAAGAAC--ATATTCAGTA--TT-----GTTA---TTA---ATATTTT--CCATATCGTCTACAACTTCCATTGGTA--TAATATTTT---TCTTTTGAAAACCAACACCTATCTTTCCAATACTTTTCCA--------AAAAT--TT---ACAGAATTTTTATCA-ATATC-TGATAAG-AAGTCATTTTGT----ATTTTAA----ACCAAT-ATATTCGTTTAGATTTTTGAACCTCTCTATTAAA-ACC--TTTTCTGCATCGTAAAA---AGTTA-A-TACGAAGAATTTTCT-TTT-GAAAT--A-T----GTTA--TGAC----ATT----TCAAGTACCCTTT-TTC-----------TG--CAAA--ACAT-ACTTTATTCCATAAATCTG---ACAGATATTCGTTCCACCAAGGTTTACCAATTTTCCTACCTTTAT--Ttgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|11 : gctatG-CACCAA-AATGGTTTGGAAGTTACTGGCCATCAACTGATCTGCTGGGGATTGATCAAGGTGTATGTAGACGTTCTCATACTGTTTGCTAGTCTTCAGT-----TTTGG----C-TT--CTGTATCATGATCGTCGTTGGTCATGAATTTAGCAATTACAACGCCCGGTT----TGCCATCACTGGTAGAGTTCTTGCGCTGAGCACTGGCGCACA-CAACATCACTCACTCGGAGACCGTCGCGT---ATAAGAGAGTTCACCATGTTGC----TGACATTCTCATTTGCATTCTCTGGAAGGCCTCTAAg
gi|12 : ATATATAAAAGG--------CCTTCATTCTGGTATTTATAAATATCTGTTAAAAGAGTACCATA------AAAAGCAGTTACATCAAAAGAC-CTTGAAGAATTTTCAGGTGGTAAATAACAAACACATGGCAA-----------------CCTTATGATTAAACTTCAACCATAGAAATCCTTCAAACGAGT-TT-T--CTAAAATGGATATATCAAATTCATTAA---ATAAT-T-CGTTCTTGACAAAGAAACCAACTCCACCAGAACCGGCTCTAGCATTTTTATGTA---TAAC-------TTTTCGGTTCAAACCAAACCATGTATAACCTTCTAAGGTCAATTTGT-GT---TCATGAAAT---AGATGAGTTTCTGCTTATG-CTAAAATATCAATATC---AGAATTAAAAACACATAATGATCTTAAATTAAAATTGTC------AGATTCACAGTCAACACTCCAGTCACGGACGTTCCAAAACTCGGCttaatacattaagagggatctcagactgttgatgatgtgggccattggtgacaatagattcaagttttgcactcatttcgttaagttcctctgctacttcaactttgatgggatctttaaaagagtctaacttaagatcaatatccttacggacacgactcatttcagagttgacacgcttgtctaacaattgggcaaatttatttgatattctctactcgaggcttgattcaagtttgtccctgcattccttaacggaagagaacagtatgtgcatgtcagcag
gi|14 : atAATGCAACCCCTCTGT-AAGA-AAGGGGGTCTCTTGGGT-CCGTAACAGATT-ACTTGGGTATTGTGTT-A--ATGATACATTTACCCCA-GGT-ATATGGAACTGTG-CCAT--TTAAA------ATTTAATAAAACATG-A-AGAA--ATAAAACGGGCGT-ATCATT--------ACA---------------------CAATACC-------TCAC------TTT-GCATTTTCA---ATGGCTT---CTT---------------TAACT-TCA----AAAACAGAGATAT--------TATCATT---AAA-----AGGC---AAAT---T---TGT---------G------------G---TG----T-----T-----Atgacagctaagtacgattactcttacctcggatgttttgccctcagttgttgttgcgacgtccattagtattgttgctataacttagtcccgctctggtccacctaacactac
gi|15 : AGTGCCAGACCTCGAT-ATGA-AAGATGATATCTTACAT-TATCCG-AACCTGACTTAGGAATAGGATT-T--ACGATA---TTATTCTAAGATCATATGCAACT------AATATCAAAACATATGTAAAAAAATATATGTA-AAAC--A---AGTAGACGT-ATGTTTTTTT-AAAACATC-AATT-G-GTA-TGTT-TTCTCCACTAATCGTTTTATC-CTTCTTT-GC
gi|16 : gattatgcaAT-----CC-GTA--G--ATATATTTGC----AT-T----ATCA--------ACA-------TTCATACACCA-AGTAAGAGTTAATGATCCGCAATACCAGTTGGAA-----Cca
gi|17 : caatatccgtgtgggaacgaagactgccatccgtgatgatgtctgcacttgcgttaaaatgtcagggtcgggaacgaatgggtcaggaatgatacgtgcaaaatcgaacacgttttcagttgtttcttatacataagaTTTAGTAGAAATAGATGTATAATCGTTGTT-AGAAC-AATTTCTCCCATTTTA-CATAC-ACAT---------GATAAGAAAATCTGTAAAAAGCTCACCATAATG-ATTTGTTTTAAAATCGATAACATCCCGTTCA-ATA---ATATCACCAACGCCGATAATAAAATCGTCCATT-TCGCCACATCTACTATTGAA--GTCGTCATATATA
gi|18 : TAAAATAAACATTAACATGTACATGTA-AAAA--AT------GACATAATTTTTTTTA-AAAA-ATG-CA---G-ATA--ATTCATCGATACCACATGCCTTACC-ATTTTTC-GAA---TCAAAGACAGCTT---TAC---------------GTATT-TC-----AAAATAG---TAA--------TGTCATT------------GTC---AAAT---T---
gi|19 : taATGCAATGCTTCTGT-AAGGCAAGCGGG-CTATTTGAT-CTGTAATAGAA-GATTTGGGTATTGGAAT-G--ATTATACACCTACCAAT-AAT-AAATGGAACATTT-CCATTTGAAAAACAAATATTAAACAAACAATGAAGAAAA--AT-CAAC-AAGGT-ATTAcaggtacaaaaatattatacaa
gi|2 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGGCGG-AGCTTGACTTAGGTATAGGATT-T--ATAATAGATTTACCCCA-TAA-AGATGGAA-TACAACCTTTATTAAAACAAACATTAAAAAGAACATGTA-AAAA--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTTTTA-GCATTTTCA---ATAGCTT---TTT---------------TTACT-TCT----AGAATAGATATAT--------GCTCATC---CAA-----AATA---AAAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GAATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCACTT--ACTTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG-----AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCCA--------GAATT--CTTT--CGG-ATCATTATT-TATATCAT--TTAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCTAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGTTAA-CAATA--CCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTAATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTCAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTC--TCTAGTGTTAT--CTAGAACAGATATATTAAA-CCACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T--T-------TTTGCGATTATTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGACCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCATTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTTGCCGTGTTCCAGCTGTGTTGGCTCTGTCTGTTTGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTGTGAAACCGATCCCGTAGAAGCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGATAGCCGTTATCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGATTATTCTTTAATGAAGACTTGGAAGACATTACCT-TACTTTTATCGGCACTAGATTTCAACTTAGCGATTACCACACC-GGCTCTACTGTTATTATTTG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAGACAGAATTAATTTTCAGGCCAT---GTGAAATAAGTGAGTTGACC---TT-CTCATCCAGATTTTCGTTGACACTTTCGGGGAGATTTCTAAc
gi|21 : CAACACGTGTATCAT-TAGTGATAATT-ACCACCGCAGTTGATGGACATGAA-GAT--TTTT
gi|3 : T--ATA--ATC--TTTCTCCCATTT--ACTTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG-----AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCCA--------GAATT--CTTT--CGG-ATCATTATT-TATATCAT--TTAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATAAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATATTAATACTGAATGATCTGGAATACCTGCTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAACATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCCACGTGACGGAAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTC--TCTAGTGTTAT--CTAGAACAGATATATTAAA-CCACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGT
gi|4 : AATGCAATCCCTCTTT-AAGA-AAGGGGGTCCCTTGGGT-CCGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGACACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAGCGTG-A-AGAA--ATAAAATGGACGG-TTCATTACAC-AGAACCTC--ACTTG-GGA-TATT-ATCAATATCACAAGCTTTACC-TCGTTTT-GCATTTTCA---ACGGCTT---TTT---------------TCACT-TCA----AAAACAGATATAT--------TATCATT---GAA-----AGAC---AGATTTAT---AGTGTTACTATCA---------TCCGAAATG----TCTGAAT-----GC----A----AAT-GTATCTGAGC---A-TGTC----CA--TC---AC-TG---GTT-TTATG--AAAT-A-AC----GA------------A-----CT--AAA--GTC--AATTTTCCACTT--GTTCAAAAC--ATCTGAAACA------AAAGTCG-AAATAGAGCCATCAT-----GA-AGTTT--AACTTCAAAAGGTAT---AC-ATTTAG-TTTTATACTTGTTTACACCGATCTTACCGATAGACTTCCA--------GAA----CTTGGACTG-ATCAACATTACA-ATCAT--TAAGTAATTCATTTTTT----AAAGAGA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGGTCAAATAAT--TTACGAACTT-GTACA-T--ATTCAGA-T-TTAAG--ATC-TT-TTC-T-GACA-T-T-----TCG--TTG-----AGTACACTTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----GT-CCACATTTCTG---ATAATCTCTCGGTCCACCACTGTTTACCAGGTCTACATCTTTTAT--T-CTG-T-----TGAT------TAGAC---TG-TATAGTTTTAAAGGGTATT-TGATTATACAT----ATTATTCTTAACTATACTACACCAATCTT---GATAAAC-ACTATCGATATCATGTTGTGTTTA-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATTAGTAAGCACT---TCTGTATTATTTAG-AAATGAGTCTGGTAATTTA-GTT--AAATTAAATTTATCATAAC-TACTACTTTGTAGTGTTTCGTT-----T-----TC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGG-------------TGCAAGAAAATTCAAATCACCTGACCTGTTTATTAAATCAACAGTCCTAACAAC-AGAAAAATCTGTAA--AACAA-GACAA-ATCATCATGAC-CGC-AAATGCAATAATCTACCACTGACAAACCCTTGGTAGAAACAGATGTAAAATCGTTG-TTAGAAC-AATTTCTCCCATTTAACCATGTGACATTTTTGAGTTGA
gi|5 : ttgttAATGCAATCCCTCTAT-AAGA-AAGGGAGTCCTTTGGGT-CCGTAGTAGAA-AACTTGGGTATTGGGTT-A--ATGATACATTAACCCCA-AAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAACATGAA-GAAA--A-AGAATGGACGT-ATCATT---ACACAATACCTCACTTG-GAA-TATT-ATCAATACCACAAGCTTTAAC-TCGCTTT-GCATTTTAA---ATGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----ATGC---AAAT---TTGCAGT---------ATTACTATCATTCG---AGAAGTC-----T-----ACATGTC----AAT-GTGCC----T---GGTCAT----GT--CC---AT-TA----CTATTAT------T------GTAAA---ATAACG--TA-----CT--AAA--ATC---------AACTT---TTCAAAAC--ATCTGAAATAGATGTAGAAATAA-A---A---CCATCAT-----GA-AGTTT--AACTTCAAAAGGTAT---AC-ATTTAGAT-TTGTACTGGTTAACACCGATCTTACCGATTGACTTCCA--------GAA----CTTGGACTG-ATCGACATTACA-ATCAA--TAAGCAATTCATTTTGT----AAAAAAA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTTCAAACTT-GTACA-T--ATTCAGA-T-TTAAG-----ATT-TTT-T--------T----AACA--TTTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----G-TCCATATTTCTG---ACAATCTCTCGGTCCACCATTGTTTACCAGGTCTACATCTTTTATTGTATTGAT-----TAG----------AC---TG-TATAGTTTTTAAGGGTATA-TGGTTATACAT----ATTATTCTTAACTATATTACACTAATCCT---GATAAAC-ACTATCGATATCATGTTGTGTTTG-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATCAG--A-CAGCACTTCTGTATTATTTAGAAAATAA-TCTGGTAATTTA-GTT--AAATCAAATTTATCATAAC-TATTA----CTAA-G--CGGTG---TATAAATATC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATAAAAGTTGGTG-----CAAGATAACTCAAATCAT---CTGAC-----CTGTTTATTAAATCCACAGTCCTAACAAT-TGAAAAATCTGTAA--AAC-GAGACAA-ATCATCATGAC-TGC-AAATGCAATAATCTACCACTGACAAACCCTTATTAGAAATAGATGTATAATCGTTGTTAAAAC--AATTTCTCCCATTTAA-CATAC-ACATATTGGTACTGA
gi|6 : tggct--AACCGTCATCGGTAT-T-AC-TTTTG--TCCTGTCATTTTTAATTCCGATTTGGCCAATTTCTTTCCA--------AAATTGATTTTGGTTT--TTATCATT-TACATTTTC-TA--TATTTCTGCTTGT----ACGTTAA----ACCGGT-AACTACGTTTAGTCCTTTGCACCTATCTCTCAAA--ACGTTTTCTAGCA--GAACAAT--AA----A-T---AAC--TTTATT-TTTCTTCACA-A-TTTT-ATCA--ATAC----ATT----TTAACCATTCTTT-TTTGG--T------TAAAC-AC--ACAT-T----ATTCCAAA-----G---TCAAATGTTTGCTCAACCATGGATTACCAGGTC---GCCTCTTAT--T-TTG-T-----AAA-------CATGA---TAATATGGGCTTGCAGGGTAGCGTAGCTA-ACAT----TTCCTCTTTAGCTAGGCTACATCAACCAT---TACATGC-ACTATCGTTATCA---T---CTTG-TGT--ACGAAAAC-C-TCCCTCCAAGTCTA-CAATAGACGTGTT----TAC--TGATGA-TAATA--T--ATATCTGACAGAAAGTCA-CGAGGTACATT--TGTA-ACATTAAATCCATCACA-------A----ATAA-ATTCGACT---T-T----------------AGACAGTTGGTAGTATGT----TTTATTATAGTGAAACTTATATTTAATATTCTAGCTTAAAATAGAGTGGTAGGGTAAACCAGATCGAGATAGAAA--ATTGCCTTTATTTT---ATTCC--------TTCACTAGCTCGGTTACTCTGATAATATGAGA---CT-CCGAAAATAATGATAACGTTTTTATGACTTACAAAAT--AATAGTCAACAACCGAAATGCCTTTAACAGACACAGAAGTGAAATC---ATTTAAAATGCATTTCGACCATTTAG-CATAC-ACATATAAGCGTTGATTGAAAAATCAATTAAATCATTCCCA-TACGCATTTTACTTAAAATC--CG-CATTATTATGACCTACTTA-CTCGTCAACACCAAAAATATAATCAG-CGGAATCAACACAGCTACTGTTAAAATATCTACATATATAAATAATACATGTTCCATCATTCTGATGCT------------TTAAAAGAGTTTCAAAATAGTTATGCACATCAACGCTAC--GACTT-----GAGTTCTCTGGTGGCAAATAGCG-----GTGGATAAATAACACTA---------TTAT---CAAGTTTTAACCATAAAATACATTT--AGTAGCATTATAACC--AATAGAAATGTCAAA-----TTTAGAACAAAGTAAATTTTGGATTAAAAACCCGACCCCATCAGACCCTGTTCTTGCTCTAATAT
gi|7 : gATACCTCTAT-ATGA-CATAGGATTTCTTGGAT-CTGTGTT-TCCTGACTTTGGTATAGGGCT-C--ATAATGCCTAGGCCCCA-GTC-AATCGGGATCATG-CCAGTATTAAAACACACATTAAATAATATATGTA-AAAT--AGAAAAAGCA-GT-GTAATTTTTA-AGTATTTC-AGAC-G-GTA-GAGT-GTCAAGACCACTGGCATTGTC-GCTCTTA-GCA-CTAAA---ACAGCCT---TAT---------------GTACG-TCT----TGAAGTGATATAT--------AAGAATT---AAAGCTTGATAT---AAA--------AGC---------G---------TT-----TG----T-----A-----AC----T----GACGGT-------TTAGA-TT-C-----A--TC---AT-TATC-ACCCTCCTG--G--TTA-GCTGTTACATTATACAGAT-------CTGAAAA--ACA--TGTTTTCCATTT--ATCCAAAACTGATTTTG--TA--TCC----CTTA-AGATA---TCACCATTGTCAGA-AACC----ACTTCTATAGGTAT-TAAT-TTCT---TTTTCTGAAAGGCTATACCAACGTTCCCACTAGATTTCCAAAAAATCTGAATT--ATAAGATTG-A---ACACT-----TGA----AAGCAGATCATTTTGC----AATTT-A----ACCAAT-AAAGTTGTTTCTCTTTTTGCACTTGTCTGTTAAATGTC--TTTTGAG-AC-G-ACA-TCAACTCATACC-TTAAC--CTTTTC-TTT-CACTTA-C-TTTGGTGCA--TTG-----AAT----ATA--TAA--TTT-TTCGT--T------TG--T-AATTACTT-T----ATTCCATAGCTCAGTTTACAA---CAAGTTCCACCATGGTTTCTTAA--CTGTTTTTTTTTT--AATTA-TATAAACAAT---GTCCATAAGAGTA-TAC---TTTTGACGGTAAC-TTATCAAACAT----TTTCCGTTTAATCAACTTACA-CAATTATGAATATGA-C-ATTGT-AATATC---------TTGCTGAATTCAAAGGC-T-ATGTTCTAACTCT---AA-AACAGTATTATGCAATATTTGT-A-CAATA--TTAGTTCTA--CATAAAAT-A-TCAGACTTATTATTGCAAACATCAGTTTT----TACCGCATCAC---CTAAAG-CAGGTTGCGT-T-----TC-----------ACAGTTCA----AT-TCAGATGTA--------ACT-------TTGATATTCCAGGTAAGAATAGAGTGGTCTGG
gi|8 : tATGCAATCCCT-TATTAAGC-AAGGGG-TCCCTTGGGTTCAGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGATACATTTAACCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAACAAAACATG-A-AGAA--ATAAAACGGACGT-ACCATT---ACACAATACCTCACT-TTGAA-TATT-ATCAATACCACAAGCTTTACC-TCGCTTT-ACATTTTCA---ATGGCTTTTTTTTACTTAAAAAACAGAGTTATTATCATTAAAAGACAAATGTACAGTGTTACTATCATCCG-AGA-----AGTC---T--T---T---AAT---------G---------TAAA---TG----T-----------GC----CTGGTAAC-GT-------TC--A-TTAC----TA--TT---AT-T-------------------------GTAAA---ATAAAGA--A-----CT--AAATCATC--TTTC---CACTT--GACGAAAAC--ATCTGAAATA------GATGTAG-AAATAGATTCATCAT-----GA-AGTTT--AACTTCTAAAGGTAT---AC-ATTTAGAT-TTGTACTAGTTTAAACCGATCTTACCGATTGACTTCCA--------GAA----CTTGGACTG-ATCGACATTACA-ATCAA--TAAGTAATTCATTTTGTGAAGAGT--------ACCAAT-AAAAACGTTTCGACTTATGTACCTCACGATCAAGTAAT--TTACGAACTG-GTACA-T--ATTCAGA-T-TTAAG-----ATC-TTT-T---T----T----AACA--TTTCGCTGAGTACACTTAAGTCACCTTCGTTCAGCAT------TA--C-TA--ACAT-A----AGTCTATATTTCTG---ACAATCTCTCGGTCCACAGCTGTTCACCAGGTCTACATCTTTTAT--TG-TG-T-----TGA
gi|8 : tggttgcttACTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCGATATCA---TGTGTTTG-TAA--T------------CCTCCAACT-TGTCAATAGCAATATT----AACATCAGTAAGCACT---TCTGT------------ATTA-TTTAGAAAATTA-GTT--AAATCAAATTTATCATAAA-TATTA----CTGA-GT--GGTG---T-T-----TCAGTATCA--CAAC-GCAAC----AT-G----TT-A--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGGatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|9 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagAACGGACGA-ATCATT---ACACAATACCTCACT-T-GTAATATT-ATCTATACAACAAGCTTTACA-TCGCTTT-GCATTTCCA---ATGCCCT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGGC---AAAT---T---TGC---------A------------G---TG----T----------------------AAC-G------------A-TTACCCGAGAAGTCTAAATGTAAATGTGCCTGGGCAGGTTCA-TTACTAGTATTGTAAAG--TAAAGAACT--AAA--ATCAGCTTTTC--ACTT--GTCCAAAAC--ATCTGAAATA--GAT-GTAGAAACAGA-A---CCCTCAT--T---A-ATTTT--AACTTCAAAAGGTATACGA--TTAC---ACCTGTACTGGTTTACACCTATCTTACCGACTGACTTCCA--------GAA----CTTTGACTG-ATTGACATTATA-ATCAT--TAAGTAATTGATTTTGT----A----AAGAGTACCAGTAAAAAATGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTACGAACTT-GTACATT---TTCAAA-T-TTAAG----AATTGTTT-TAA--A-A-T----TTCGCTTTGT----AAT----CTTAGCTACCTCA-TTCGA--TTGGCAATA--C-TA--ACAT-C----AATCCACATTTCTG---GCAGTCTCTCGGTCCTTCACTGTTAATCAGGTCTATATATTTTAT--TG-TG-T-----TGATTAGA-CTG------TA-T---GTTTTAAAGGGTATT-AGGTTATACATATTATTC-TTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCAATATCATGTTGTGTTTG-TAA--CC-----C-TCGC--TCTAACT-TGTCAATAGCAATTAT----AACATCAGTGA-GCACG--TTTGTATTATCTAGAAAtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): ACAACAGGTAAAAATGAACATGTGTTGTTGACACATAATATAAATAAGAAAAACTGTTGGTTTTTTCACTTGTTTAGAATATGTTATTATTATTATTACTACTATTTCCTAAATCATCTACAATTTCCATTAGTATTAATGGTTAGTCTTGAATCCTAACACTTATCTTTCCAATTATTTCCAAAATGTTACATTTTTTTATATATATATTGAATGAAATATCCTTTTGTATTTTTAAC
Unaligned ( gi|20 ): GATTTTTAACATATCTTCATAAAATATTTTCGGCATCGAAAAAAATTAATACAAATAATTGTCTTTATTTTATGACATTTAAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 22222 22222222 222222222222222 11111 11111111 22222222222 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 11111 111 22222 11111 111 222 11111111 1111 2222 111 1111111111 1 1111 111111 44444444444444444444444444444444444444 1 333333333 11111111 11 11111 222222222222222 1111 1 444444 33333333333333333 1111 11 11111 33333333333333333333333333333333 22222222222222222222222222222222222 111111111 111 2222222 11 1 22 11 111 11 1111 333333 111 11 11 111 77777777777777 4444444 1 222 333333 1 1 11 1 1 1 11 11 222 6666666666666
lowQualScore : 1 1 4 4 2 4 1 777 777 1 9999 55555 66666 0 1 0 9 3 55 999 1 5 3 33333 3 1 22222222 0 55 3 1 77 9999 3 0 777 777 555555555555555 4 22222 0 44444444 00000000000 1 777 8888888 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 66 66 7777 0 777 0 66 22 66 55555 1 5555 555 11111 4 88888 0 22 666 44 333 3 11 1 1 22 1 1 44444444 9999 777 0 4 44 6666 000 3 22 8888 9999999999 4 333 1 0 1 1 0 0 55 1 555 3 7777 1 1 4 4 777777 4 4 22222222222222222222222222222222222222 2 0 1 2 1 777777777 55 55 55 88888888 77 2 8888 88 0 1 1 1 33 1 11 0 55 88 4 11111 888888888888888 5 2 2 1 66 0 0000 1 22 1 1 9999 1 2 3 7 444444 4 11111111111111111 1 6666 1 9999 4 0 2 8 999 2 88 0 4 5 1 1 5 11 1 777 77777 33333333333333333333333333333333 3 99999999999999999999999999999999999 1 1 22 1 22 1 11 1 555555555 6 111 7777777 1 5 1 1 22 6 99 99 3 6 7 1 88 1 1 1 4 1 1 99 1 66 1 66 5 1 33 2 1 1 8 1 3 0 444 8 0 8 0 11 0 7777 1 3 0 0 1 0 3 444444 1 1 6 0 3 0 777777 1 222 3 0 11 0 11 444 8 00000000000000 1 3333333 7 7 7 3 6 7 333 7 888888 0 1 1 1 1 1 0 6 7 0 5 2 6 55 7 7 3 1 0 0 3 6 3 3 88 44 6 0 333 6 3333333333333 3
lowQualScore : . . . . . . . ... ... . .... ..... ..... . . . . . .. ... . . . ..... . . ........ . .. . . .. .... . . ... ... ............... . ..... . ........ ........... . ... ....... ............................................................................................................................................... .. .. .... . ... . .. .. .. ..... . .... ... ..... . ..... . .. ... .. ... . .. . . .. . . ........ .... ... . . .. .... ... . .. .... .......... . ... . . . . . . .. . ... . .... . . . . ...... . . ...................................... . . . . . ......... .. .. .. ........ .. . .... .. . . . . .. . .. . .. .. . ..... ............... . . . . .. . .... . .. . . .... . . . . ...... . ................. . .... . .... . . . . ... . .. . . . . . . .. . ... ..... ................................ . ................................... . . .. . .. . .. . ......... . ... ....... . . . . .. . .. .. . . . . .. . . . . . . .. . .. . .. . . .. . . . . . . . ... . . . . .. . .... . . . . . . . ...... . . . . . . ...... . ... . . .. . .. ... . .............. . ....... . . . . . . ... . ...... . . . . . . . . . . . . . .. . . . . . . . . . . .. .. . . ... . ............. .
lowQualScore : 1 0 0 0 3 0 0 555 555 0 6666 66666 44444 8 0 5 1 6 00 999 8 9 3 00000 5 8 11111111 1 66 6 0 88 0000 6 8 000 000 000000000000000 0 22222 8 55555555 00000000000 0 000 9999999 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 11 11 1111 9 666 9 11 77 11 44444 0 3333 666 99999 4 66666 7 44 999 33 555 2 66 0 2 66 0 4 55555555 3333 111 8 0 00 2222 666 0 22 5555 7777777777 0 333 0 7 0 4 6 8 55 0 222 2 1111 0 6 0 0 111111 0 0 88888888888888888888888888888888888888 5 8 4 0 4 999999999 55 44 55 99999999 33 4 0000 11 7 0 0 2 11 4 99 8 55 88 4 11111 222222222222222 0 0 8 4 11 4 6666 8 99 3 9 4444 3 7 3 3 333333 4 66666666666666666 1 0000 7 4444 4 7 4 9 777 6 66 9 5 0 1 0 0 99 1 111 00000 00000000000000000000000000000000 9 88888888888888888888888888888888888 0 0 88 0 00 0 88 7 666666666 3 777 5555555 0 2 0 0 00 7 77 22 5 7 3 7 88 0 0 0 0 7 0 33 9 00 0 44 7 7 66 7 4 4 0 0 8 8 000 0 6 0 8 00 8 0000 4 2 6 8 0 6 2 000000 4 0 0 8 8 6 444444 4 444 2 8 00 8 22 000 0 00000000000000 0 3333333 3 3 3 3 7 3 333 3 333333 7 0 0 0 0 0 7 7 3 0 5 5 7 77 3 3 3 0 7 7 3 7 7 3 33 00 7 7 333 7 3333333333333 7
consensus : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAAC--ATCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCCA--------GAATT--CTTNGACTG-ATCGNCATTATATATCAT--TAAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
Reference ( family-173 ) : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAAC--ATCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCCA--------GAATT--CTTNGACTG-ATCGNCATTATATATCAT--TAAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|1 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGTCGG-AGCTTGACTTAGGTATAGGATTTATCATAATAGATTTACCC-A-TAA-AGATGGAATAAAA-CCTGTATTAAAACAAAAATTAAAAAGAACATGTT-AAAC--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTATTTAGCATTTTCA---ATAGCTT---ATT---------------TTACT-TCT----TGAATAGATATAT--------GCTCATC---CAA-----AATA---AAAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GGATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCATTTTTACTTAAAAC--ATCCTTAAC--ATCT-GAAGTGA-AGCTA---CCATCAT--CCAAA-AGT-----ACCTCCATTGGAAT-TGAC-CTTT---TCTTGTTATTATGTATGCCTAGTTTACCAATAGTTTTCCA--------GAATT--CTTCG---G-ATCATTATT-TATATCAT--TTAATATTTCATCTTGT----ATTTTAT----ACTAAT-GTTGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTTAT-TTT-TAGATATA-T----ACCA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAT-A----GTTCCATAAATGAG---TCAAAGTATTACTCCACCAAGGCTTTCCAA---CGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACATACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACTAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----TACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTGATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACTAATATT---ATTAC---AAAGGTTGACAGCATCAACAGCACGGACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCGTGATTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGATATAGATGTAAAATCATTGTTTATAA--AA------CCATTAAG-GATAC-ACATATAAGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTAGTCTTTAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGATGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGTATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CGAGAACAGATATGTTATAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTTCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAGAT-ATATATATGTTTGCGATTGTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACACAAAATTATAACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGTGAACCATGTAATGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATTAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGAAATTGACGGTTGTTCTTTAATGAAGACTTATGGGACATTACCT-TAATTTTATCGGCACTATATTTCAACTTAGCGATTACCACACC-GACTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAAACAGAATTAATTTTCAGGCTAT---GTGAAATAAGTGAGTTGA--------T----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|10 : tgatTGTGATACCCCTGT-AAGA-CATAGGGTCACGTGGAT-CATTATTAGCA-GATTTAAGGATAGGGTT-A--ATGATACCCATACCCCA-TTC-TGAGAGAATAATT-CCGGTGTTAAAACAAACATTAAATAGTACATGTA-AAAACGAGATAGC---TGT-ATCATTTTTA-AAAATTTC-TATA-G-GTA-GATC-ATCTATACCGCACGCCTTACCATC-CTTC-GAATTAAAA---ACAGCTT---TAC---------------GTATT-TCA----AAAATAG---TAA--------TATCATTTTCAAATTC--AGGCACAAAAT---C---ACT---------A---------TT-----TA----T-----TGAAGCAG----C----AAC-A------------G-GTAA----AA--T------------GTTGTTATG--TGATGACGCATTA----TATAAA--TTA-----GA--AAA--ACT--GTTTTTCCATTT--ATTAAGAAC--ATATTCAGT--ATT-----GTTA---TTA---ATATTTT--CCATATCGTCTACAACTTCCATTGGTA--TAATATTTT---TCTTTTGAAAACCAACACCTATCTTTCCAATACTTTTCCA--------AAAAT--TT---ACAGAATTTTTATCA-ATATC-TGATAAG-AAGTCATTTTGT----ATTTTAA----ACCAAT-ATATTCGTTTAGATTTTTGAACCTCTCTATTAAA-ACC--TTTTCTGCATCGTAAAA---AGTTA-A-TACGAAGAATTTTCT-TTT-GAAAT--A-T----GTTA--T----GAC----ATT----TCAAGTACCCTTT-TTC-----------TG--CAAA--ACAT-ACTTTATTCCATAAATCTG---ACAGATATTCGTTCCACCAAGGTTTACCAATTTTCCTACCTTTAT--Ttgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|11 : gctatG-CACCAA-AATGGTTTGGAAGTTACTGGCCATCAACTGATCTGCTGGGGATTGATCAAGGTGTATGTAGACGTTCTCATACTGTTTGCTAGTCTTCAGT-----TTTGG----C-TT--CTGTATCATGATCGTCGTTGGTCATGAATTTAGCAATTACAACGCCCGGTT----TGCCATCACTGGTAGAGTTCTTGCGCTGAGCACTGGCGCACA-CAACATCACTCACTCGGAGACCGTCGCGT---ATAAGAGAGTTCACCATGTTGC----TGACATTCTCATTTGCATTCTCTGGAAGGCCTCTAAg
gi|12 : ATATATAAAAGG--------CCTTCATTCTGGTATTTATAAATATCTGTTAAAAGAGTACCATAAAAA------GCAGTTACATCAAAAGACCTTGAAGAATTTTCAGGTGGTAAATAACAAACACATGGCAA-----------------CCTTATGATTAAACTTCAACCATAGAAATCCTTCAAACGAGT-TT-T--CTAAAATGGATATATCAAATTCATTAA---ATAAT-T-CGTTCTTGACAAAGAAACCAACTCCACCAGAACCGGCTCTAGCATTTTTATGTA---TAAC-------TTTTCGGTTCAAACCAAACCATGTATAACCTTCTAAGGTCAATTTGT-GT---TCATGAAAT---AGATGAGTTTCTGCTTATG-CTAAAATATCAATATC---AGAATTAAAAACACATAATGATCTTAAATTAAAATTGTC------AGATTCACAGTCAACACTCCAGTCACGGACGTTCCAAAACTCGGCttaatacattaagagggatctcagactgttgatgatgtgggccattggtgacaatagattcaagttttgcactcatttcgttaagttcctctgctacttcaactttgatgggatctttaaaagagtctaacttaagatcaatatccttacggacacgactcatttcagagttgacacgcttgtctaacaattgggcaaatttatttgatattctctactcgaggcttgattcaagtttgtccctgcattccttaacggaagagaacagtatgtgcatgtcagcag
gi|14 : atAATGCAACCCCTCTGT-AAGA-AAGGGGGTCTCTTGGGT-CCGTAACAGATT-ACTTGGGTATTGTGTT-A--ATGATACATTTACCCCA-GGT-ATATGGAACTGTG-CCAT--TTAAA------ATTTAATAAAACATG-A-AGAA--ATAAAACGGGCGT-ATCATT--------ACA---------------------CAATACC-------TCAC------TTT-GCATTTTCA---ATGGCTT---CTT---------------TAACT-TCA----AAAACAGAGATAT--------TATCATT---AAA-----AGGC---AAAT---T---TGT---------G------------G---TG----T-----T-----Atgacagctaagtacgattactcttacctcggatgttttgccctcagttgttgttgcgacgtccattagtattgttgctataacttagtcccgctctggtccacctaacactac
gi|15 : AGTGCCAGACCTCGAT-ATGA-AAGATGATATCTTACAT-TATCCG-AACCTGACTTAGGAATAGGATT-T--ACGATA---TTATTCTAAGATCATATGCAACT------AATATCAAAACATATGTAAAAAAATATATGTA-AAAC--A---AGTAGACGT-ATGTTTTTTT-AAAACATC-AATT-G-GTA-TGTT-TTCTCCACTAATCGTTTTATC-CTTCTTT-GC
gi|16 : gattatgcaAT-----CC-GTA--G--ATATATTTGC----AT-T----ATCA--------ACA-------TTCATACACCA-AGTAAGAGTTAATGATCCGCAATACCAGTTGGAA-----Cca
gi|17 : caatatccgtgtgggaacgaagactgccatccgtgatgatgtctgcacttgcgttaaaatgtcagggtcgggaacgaatgggtcaggaatgatacgtgcaaaatcgaacacgttttcagttgtttcttatacataagaTTTAGTAGAAATAGATGTATAATCGTTGTT-AGAAC-AATTTCTCCCATTTTA-CATAC-ACAT---------GATAAGAAAATCTGTAAAAAGCTCACCATAATG-ATTTGTTTTAAAATCGATAACATCCCGTTCA-ATA---ATATCACCAACGCCGATAATAAAATCGTCCATT-TCGCCACATCTACTATTGAA--GTCGTCATATATA
gi|18 : TAAAATAAACATTAACATGTACATGTA-AAAA--AT------GACATAATTTTTTTTA-AAAA-ATG-CA---G-ATA--ATTCATCGATACCACATGCCTTACC-ATTTTTC-GAA---TCAAAGACAGCTT---TAC---------------GTATT-TC-----AAAATAG---TAA--------TGTCATT------------GTC---AAAT---T---
gi|19 : taATGCAATGCTTCTGT-AAGGCAAGCGGG-CTATTTGAT-CTGTAATAGAA-GATTTGGGTATTGGAAT-G--ATTATACACCTACCAAT-AAT-AAATGGAACATTT-CCATTTGAAAAACAAATATTAAACAAACAATGAAGAAAA--AT-CAAC-AAGGT-ATTAcaggtacaaaaatattatacaa
gi|2 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGGCGG-AGCTTGACTTAGGTATAGGATT-T--ATAATAGATTTACCCCA-TAA-AGATGGAA-TACAACCTTTATTAAAACAAACATTAAAAAGAACATGTA-AAAA--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTTTTA-GCATTTTCA---ATAGCTT---TTT---------------TTACT-TCT----AGAATAGATATAT--------GCTCATC---CAA-----AATA---AAAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-AT-------T---A-TTAT----GA--TC---AT-TA---GTTCTTATG--GAATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCACTT--ACTTAAAAC--ATCCTTAAC--ATCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG-----AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCCA--------GAATT--CTTT--CGG-ATCATTATT-TATATCAT--TTAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCTAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGTTAA-CAATA--CCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTAATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTCAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T--T-------TTTGCGATTATTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGACCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCATTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTTGCCGTGTTCCAGCTGTGTTGGCTCTGTCTGTTTGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTGTGAAACCGATCCCGTAGAAGCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGATAGCCGTTATCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGATTATTCTTTAATGAAGACTTGGAAGACATTACCT-TACTTTTATCGGCACTAGATTTCAACTTAGCGATTACCACACC-GGCTCTACTGTTATTATTTG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAGACAGAATTAATTTTCAGGCCAT---GTGAAATAAGTGAGTTGACC---TT-CTCATCCAGATTTTCGTTGACACTTTCGGGGAGATTTCTAAc
gi|21 : CAACACGTGTATCAT-TAGTGATAATT-ACCACCGCAGTTGATGGACATGAA-GAT--TTTT
gi|3 : T--ATA--ATC--TTTCTCCCATTT--ACTTAAAAC--ATCCTTAAC--ATCT-GAAGTCA-AGTTA---CCATCAT--CCAGA-AG-----AACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATAGATTTCCA--------GAATT--CTTT--CGG-ATCATTATT-TATATCAT--TTAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATAAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--T----TAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCT--TATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCCAT---TAAAAGCCAC-ATCGATATCA------GTTTG-TGA--ACGGAGAC-T-GCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATATTAATACTGAATGATCTGGAATACCTGCTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAACATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCCACGTGACGGAAC------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGT
gi|4 : AATGCAATCCCTCTTT-AAGA-AAGGGGGTCCCTTGGGT-CCGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGACACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAGCGTG-A-AGAA--ATAAAATGGACGG-TTCATTACAC-AGAACCTC--ACTTG-GGA-TATT-ATCAATATCACAAGCTTTACC-TCGTTTT-GCATTTTCA---ACGGCTT---TTT---------------TCACT-TCA----AAAACAGATATAT--------TATCATT---GAA-----AGAC---AGATTTAT---AGTGTTACTATCA---------TCCGAAATG----TCTGAAT-----GC----A----AAT-GTATCTGAGC---A-TGTC----CA--TC---AC-TG---GTT-TTATG--AAAT-A-AC----GA------------A-----CT--AAA--GTC--AATTTTCCACTT--GTTCAAAAC--ATCTGAAAC--A----AAAGTCG-AAATAGAGCCATCAT-----GA-AGTTT--AACTTCAAAAGGTAT---AC-ATTTAG-TTTTATACTTGTTTACACCGATCTTACCGATAGACTTCCA--------GAA----CTTGGACTG-ATCAACATTACA-ATCAT--TAAGTAATTCATTTTTT----AAAGAGA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGGTCAAATAAT--TTACGAACTT-GTACA-T--ATTCAGA-T-TTAAG--ATC-TT-TTC-T-GAC--A-T----TTCG--TTGAGTAC----A-C----TTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----G-TCCACATTTCTG---ATAATCTCTCGGTCCACCACTGTTTACCAGGTCTACATCTTTTAT--T-CTG-T-----TGAT------TAGAC---TG-TATAGTTTTAAAGGGTATT-TGATTATACAT----ATTATTCTTAACTATACTACACCAATCTT---GATAAAC-ACTATCGATATCATGTTGTGTTTA-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATTAGTAAGCACT---TCTGTATTATTTAG-AAATGAGTCTGGTAATTTA-GTT--AAATTAAATTTATCATAAC-TACTACTTTGTAGTGTTTCGTT-----T-----TC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGG-------------TGCAAGAAAATTCAAATCACCTGACCTGTTTATTAAATCAACAGTCCTAACAAC-AGAAAAATCTGTAA--AACAA-GACAA-ATCATCATGAC-CGC-AAATGCAATAATCTACCACTGACAAACCCTTGGTAGAAACAGATGTAAAATCGTTG-TTAGAAC-AATTTCTCCCATTTAACCATGTGACATTTTTGAGTTGA
gi|5 : ttgttAATGCAATCCCTCTAT-AAGA-AAGGGAGTCCTTTGGGT-CCGTAGTAGAA-AACTTGGGTATTGGGTT-A--ATGATACATTAACCCCA-AAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAACATGAA-GAAA--A-AGAATGGACGT-ATCATT---ACACAATACCTCACTTG-GAA-TATT-ATCAATACCACAAGCTTTAAC-TCGCTTT-GCATTTTAA---ATGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----ATGC---AAAT---TTGCAGT---------ATTACTATCATTCG---AGAAGTC-----T-----ACATGTC----AAT-GTGCC----T---GGTCAT----GT--CC---AT-TA----CTATTAT------T------GTAAA---ATAACG--TA-----CT--AAA--AT---------CAACTT---TTCAAAAC--ATCTGAAATAGATGTAGAAATAA-A---A---CCATCAT-----GA-AGTTT--AACTTCAAAAGGTAT---AC-ATTTAGAT-TTGTACTGGTTAACACCGATCTTACCGATTGACTTCCA--------GAA----CTTGGACTG-ATCGACATTACA-ATCAA--TAAGCAATTCATTTTGT----AAAAAAA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTTCAAACTT-GTACA-T--ATTCAGA-T-TTAAG-----ATT-TTT-T--------T----AACA--T----TTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----G-TCCATATTTCTG---ACAATCTCTCGGTCCACCATTGTTTACCAGGTCTACATCTTTTATTGTATTGAT-----TAG----------AC---TG-TATAGTTTTTAAGGGTATA-TGGTTATACAT----ATTATTCTTAACTATATTACACTAATCCT---GATAAAC-ACTATCGATATCATGTTGTGTTTG-TAA--TC-----CTT-GC--TCCAACT-TGTCAATAGCAATATT----AACATCAG--A-CAGCACTTCTGTATTATTTAGAAAATAA-TCTGGTAATTTA-GTT--AAATCAAATTTATCATAAC-TATTA----CTAA-G--CGGTG---TATAAATATC-ACA--ACGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATAAAAGTTGGTG-----CAAGATAACTCAAATCAT---CTGAC-----CTGTTTATTAAATCCACAGTCCTAACAAT-TGAAAAATCTGTAA--AAC-GAGACAA-ATCATCATGAC-TGC-AAATGCAATAATCTACCACTGACAAACCCTTATTAGAAATAGATGTATAATCGTTGTTAAAAC--AATTTCTCCCATTTAA-CATAC-ACATATTGGTACTGA
gi|6 : tggct--AACCGTCATCGGTAT-T-AC-TTTTG--TCCTGTCATTTTTAATTCCGATTTGGCCAATTTCTTTCCA--------AAATTGATTTTGGTTT--TTATCATT-TACATTTTC-TA--TATTTCTGCTTGT----ACGTTAA----ACCGGT-AACTACGTTTAGTCCTTTGCACCTATCTCTCAAA--ACGTTTTCTAGCA--GAACAAT--AA----A-T---AAC--TTTATT-TTTCTTCACA-A-TTTT-ATCA--A----TAC----ATT----TTAACCATTCTTT-TTTGG--T------TAAAC-AC--ACAT-T----ATTCCAAA-----G---TCAAATGTTTGCTCAACCATGGATTACCAGGTC---GCCTCTTAT--T-TTG-T-----AAA-------CATGA---TAATATGGGCTTGCAGGGTAGCGTAGCTA-ACAT----TTCCTCTTTAGCTAGGCTACATCAACCAT---TACATGC-ACTATCGTTATCA---T---CTTG-TGT--ACGAAAAC-C-TCCCTCCAAGTCTA-CAATAGACGTGTT----TAC--TGATGA-TAATA--T--ATATCTGACAGAAAGTCA-CGAGGTACATT--TGTA-ACATTAAATCCATCACA-------A----ATAA-ATTCGACT---T-T----------------AGACAGTTGGTAGTATGT----TTTATTATAGTGAAACTTATATTTAATATTCTAGCTTAAAATAGAGTGGTAGGGTAAACCAGATCGAGATAGAAA--ATTGCCTTTATTTT---ATTCC--------TTCACTAGCTCGGTTACTCTGATAATATGAGA---CT-CCGAAAATAATGATAACGTTTTTATGACTTACAAAAT--AATAGTCAACAACCGAAATGCCTTTAACAGACACAGAAGTGAAATC---ATTTAAAATGCATTTCGACCATTTAG-CATAC-ACATATAAGCGTTGATTGAAAAATCAATTAAATCATTCCCA-TACGCATTTTACTTAAAATC--CG-CATTATTATGACCTACTTA-CTCGTCAACACCAAAAATATAATCAG-CGGAATCAACACAGCTACTGTTAAAATATCTACATATATAAATAATACATGTTCCATCATTCTGATGCT------------TTAAAAGAGTTTCAAAATAGTTATGCACATCAACGCTAC--GACTT----GAGTTCTCTGGTGGCAAATAGCG-----GTGGATAAATAACACTA---------TTAT---CAAGTTTTAACCATAAAATACATTTA--GTAGCATTATAACC--AATAGAAATGTCAAA-----TTTAGAACAAAGTAAATTTTGGATTAAAAACCCGACCCCATCAGACCCTGTTCTTGCTCTAATAT
gi|7 : gATACCTCTAT-ATGA-CATAGGATTTCTTGGAT-CTGTGTT-TCCTGACTTTGGTATAGGGCT-C--ATAATGCCTAGGCCCCA-GTC-AATCGGGATCATG-CCAGTATTAAAACACACATTAAATAATATATGTA-AAAT--AGAAAAAGCA-GT-GTAATTTTTA-AGTATTTC-AGAC-G-GTA-GAGT-GTCAAGACCACTGGCATTGTC-GCTCTTA-GCA-CTAAA---ACAGCCT---TAT---------------GTACG-TCT----TGAAGTGATATAT--------AAGAATT---AAAGCTTGATAT---AAA--------AGC---------G---------TT-----TG----T-----A-----AC----T----GACGGT-------TTAGA-TT-C-----A--TC---AT-TATC-ACCCTCCTG--G--TTA-GCTGTTACATTATACAGAT-------CTGAAAA--ACA--TGTTTTCCATTT--ATCCAAAACTGATTTTG--T--ATCC----CTTA-AGATA---TCACCATTGTCAGA-AACC----ACTTCTATAGGTAT-TAAT-TTCT---TTTTCTGAAAGGCTATACCAACGTTCCCACTAGATTTCCAAAAAATCTGAATT--ATAAGATTG-A---ACACT-----TGA----AAGCAGATCATTTTGC----AATTT-A----ACCAAT-AAAGTTGTTTCTCTTTTTGCACTTGTCTGTTAAATGTC--TTTTGAG-AC-G-ACA-TCAACTCATACC-TTAAC--CTTTTC-TTT-CACTTA-C-TTTGGTGCA--T----TG-----AAT----ATA--TAA--TTT-TTCGT--T------TG--T-AATTACTT-T----ATTCCATAGCTCAGTTTACAA---CAAGTTCCACCATGGTTTCTTAA--CTGTTTTTTTTTT--AATTA-TATAAACAAT---GTCCATAAGAGTA-TAC---TTTTGACGGTAAC-TTATCAAACAT----TTTCCGTTTAATCAACTTACA-CAATTATGAATATGA-C-ATTGT-AATATC---------TTGCTGAATTCAAAGGC-T-ATGTTCTAACTCT---AA-AACAGTATTATGCAATATTTGT-A-CAATA--TTAGTTCTA--CATAAAAT-A-TCAGACTTATTATTGCAAACATCAGTTTT----TACCGCATCAC---CTAAAG-CAGGTTGCGT-T-----TC-----------ACAGTTCA----AT-TCAGATGTA--------ACT-------TTGATATTCCAGGTAAGAATAGAGTGGTCTGG
gi|8 : tATGCAATCCCT-TATTAAGC-AAGGGG-TCCCTTGGGTTCAGCAGTAGAA-GACTTGGGTATTGGGTT-A--ATGATACATTTAACCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAACAAAACATG-A-AGAA--ATAAAACGGACGT-ACCATT---ACACAATACCTCACT-TTGAA-TATT-ATCAATACCACAAGCTTTACC-TCGCTTT-ACATTTTCA---ATGGCTTTTTTTTACTTAAAAAACAGAGTTATTATCATTAAAAGACAAATGTACAGTGTTACTATCATCCG-AGA-----AGTC---T--T---T---AAT---------G---------TAAA---TG----T-----------GC----CTGGTAAC-GT-------TC--A-TTAC----TA--TT---AT-T-------------------------GTAAA---ATAAAGA--A-----CT--AAATCATC--TTTC---CACTT--GACGAAAAC--ATCTGAAAT--A----GATGTAG-AAATAGATTCATCAT-----GA-AGTTT--AACTTCTAAAGGTAT---AC-ATTTAGAT-TTGTACTAGTTTAAACCGATCTTACCGATTGACTTCCA--------GAA----CTTGGACTG-ATCGACATTACA-ATCAA--TAAGTAATTCATTTTGTGAAGAGT--------ACCAAT-AAAAACGTTTCGACTTATGTACCTCACGATCAAGTAAT--TTACGAACTG-GTACA-T--ATTCAGA-T-TTAAG-----ATC-TTT-T---T----T----AACA--T----TTCGCTGAGTACACTTAAGTCACCTTCGTTCAGCAT------TA--C-TA--ACAT-A----AGTCTATATTTCTG---ACAATCTCTCGGTCCACAGCTGTTCACCAGGTCTACATCTTTTAT--TG-TG-T-----TGA
gi|8 : tggttgcttACTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCGATATCA---TGTGTTTG-TAA--T------------CCTCCAACT-TGTCAATAGCAATATT----AACATCAGTAAGCACT---TCTGT------------ATTA-TTTAGAAAATTA-GTT--AAATCAAATTTATCATAAA-TATTA----CTGA-GT--GGTG---T-T-----TCAGTATCA--CAAC-GCAAC----AT-G----TT-A--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGGatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|9 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagAACGGACGA-ATCATT---ACACAATACCTCACT-T-GTAATATT-ATCTATACAACAAGCTTTACA-TCGCTTT-GCATTTCCA---ATGCCCT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGGC---AAAT---T---TGC---------A------------G---TG----T----------------------AAC-G------------A-TTACCCGAGAAGTCTAAATGTAAATGTGCCTGGGCAGGTTCA-TTACTAGTATTGTAAAG--TAAAGAACT--AAA--ATCAGCTTTTC--ACTT--GTCCAAAAC--ATCTGAAAT--AGAT-GTAGAAACAGA-A---CCCTCAT--T---A-ATTTT--AACTTCAAAAGGTATACGA--TTAC---ACCTGTACTGGTTTACACCTATCTTACCGACTGACTTCCA--------GAA----CTTTGACTG-ATTGACATTATA-ATCAT--TAAGTAATTGATTTTGT----A----AAGAGTACCAGTAAAAAATGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTACGAACTT-GTACATT---TTCAAA-T-TTAAG----AATTGTTT-TAA--A-A-T----TTCGCTT----TGT----AAT----CTTAGCTACCTCA-TTCGA--TTGGCAATA--C-TA--ACAT-C----AATCCACATTTCTG---GCAGTCTCTCGGTCCTTCACTGTTAATCAGGTCTATATATTTTAT--TG-TG-T-----TGATTAGA-CTG------TA-T---GTTTTAAAGGGTATT-AGGTTATACATATTATTC-TTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCAATATCATGTTGTGTTTG-TAA--CC-----C-TCGC--TCTAACT-TGTCAATAGCAATTAT----AACATCAGTGA-GCACG--TTTGTATTATCTAGAAAtga
blockSeqs : G A T C A T A ATT ATT A A AGATC TACAA T T G CG GAT G T A TTTA A T TCACTTG AT C T AC ATC . AAG TTT ACTTAAAAAACAGAG A ATTAA AGTGTTAC TTCAAATTC G ACA TTAT AGTGTAACGATTACCCGAGAAGTCTAAATGTAAATGTGCCTGGGCAGGTTCATTACTAGTATTGTAAAGTAAAGAA GA TC CAGC A TG TC AG TGTAG T CAGA GAG TGTCA T TCTAC TT ACG AT AGA C GA A C CA T A AAAAATCT TTGA GGA A TT AAT TGA C AG GAAG TTTTAA A ATT A A T GT C ATC T TCA G G C A AATTTT G C TCACAATTTTATCAATACATT G C G A TTGGCAA AA AA TT ACTTTAT AA T TTTA AT T A A TT C TA TG AT A ATAAA TGTCCATAAGAG A A A G GT ATTA A GA A A GAAT A G C T TGTTGT C ATTCAAAGGCTATGT G CTG G ATGC C A G ACT A GC C G T T T AA G CCG CTTTG GCGGTGTATAAATATCACAACGC T GTAGTATGTTTTATTATAGTGAAACTTATAT C A TG G GT A CA A ATAGAAA A CAA CTGACCT G G C A GT A TG AA T C T T TG A G C G T G TG T TC T CC G A TG A A G T T G CTT T C AT CATG T T A A CTTGAA T T A C TCTTCT T AAA G AA TT AGA A TAAC C GGTCAAT A A T T C T AAC A GTCAAC T T G G A G T A T G G AA A A G T C C G T CT GC G CGC G CCATGTTGC T
blockSeqs : A C . . G . C AAC CCT T A TTC AATT T T . . TAA A C . TTTT A C TCACTTT G . A TC CTT . . . . . A . AAAGCTTG G . TTGC GTTACTATCATCCGAAATGTCTGAATGCAAATGTATCTGAGCATGTCCATCACTGGTTTTATGAAATAACGAA . . TG A . TT . TCTG C AGT GAT CCA . TTT TT TA T AGA C TA T G TG T A . AT GGA . AT TAT TC C TA . TTTTAT . TGG A A T . T AT T GT A G . . TTTA . . ACTTACTTTGGTGCATTGAAT C T G A ACT . A . AGT AA A A AG T A T GT G GC . AT . . TGCCGCAA . A A G C . A GA A A T A G C T TGTTGT . ACGGAGACTGCCT G CTG G . C A G A A GC C . T T . A G TC CC CATCTGATTTATTCGTAAA G AATTCAGATGTAACT T A TA T CT A TT A CAAG A . AAAG G G C A GT . TG . T . T T TG A G C A T T C A GA A C . A TG A T T . G A . . . . . A C A G TT A A T C TCTTCT A T G . C . . AGTT A . . . . . . . . . . . . . . G . . . . . C . . T . . A . . . CCTTCTCAT G
blockSeqs : C A . . A . A AAT CTT A T GGT TGTG A T . . TAT G C . TTTA A C TCACTT T . T AT ATT . . . . . A . CGAGA T . C ATTACTATCATTCGAGAAGTCTACATGTCAATGTGCCTGGTCATGTCCATTACTATTATTGTAAAATAACGTA . . CT A . TT . TCTG C AGT . CCA . TTT TT TG T AG C TA T G TG T A . TT TGG . AT TAT T T TA . TTTTAT . TGG A A T . T AT T GT A G . . TTTA . . TTAACATTTCGCTGAGTACAC C T G G ACT . A . AGT AA A T AG T A T GT G GC . AT . . TGCCGCAA . A T T C . A TC T T T T A . T TGTTGT . ACGGAGACTGCCT C TGT A . A A . A T TT G . C A . . A TC G CATCTGATTTATTCGTAAA G CATTATCAACA T A TT T CT A CT A CA G . AAAG T T A C TA . A . A . T A T T T A A T T C A GA A A . T TT G T C . G A . . . . . A C T G . A A T A . A T A . C . . . . .
blockSeqs : A G . . C . T AGT CCT T G AAT ATTT A A . . TAA G C . TTTA G C TATAG T . G GT TTT . . . . . T . AAA T . T ATTCGTGTTACCAACATTATTATGATCATTAGTTCTTATGGAATCAATAGTAGAGTTATAAAGGTTA . . CT G . GA . GATG C AAA . CCA . TTT AA TG A G T AC T T CA G A . TT AGA . AA ACA T C AT . AAGAGA . AAA T T A . G TT A AT T G . . TTTA . . TAACATTTCGTTGAGTACAC G C . G CAT . T . CAG TT T T TC G C A GT A AT . AT . . TTAGACTG . A T T T . A TC T C G T A . T TGT . ACGAAAACCTCCC C TGT A . A G . A T TT A . C A . . A AC G TGTTTCGTTTTCACAACGC G GATTTTCAAAC A T TT C AA T AA T CA A . CT T T A C TA . A . T . . . . T T A G A G . T TC T A . A TG A A C . T . . . . . . T . . . . T C . . . T A . . . . .
blockSeqs : T A . . T . G AGT CA A T TAA TGTG C T . . GAA G G . ACAC G C AATTG T . T AA TCG . . . . . A . CAA A . T GTTTGTAACTGACGGTTTAGATTCATCATTATCACCCTCCTGGTTAGCTGTTACATTATACAGAT . . CA A . GA . TCC A AGA . T . TTT AA TA A . C AC G T CA G T . TT GGA . GA ACA T T AT . AAAAAA . AAA T T A . A TT T TT T T . . CTTT . . AGATAAATAACATTACAGT G C . G CAT . T . CAG TT T A TC G T A GT A AT . C . . TTAGAC . G G G T . C CT T A G C G . T T . TCCTTGC G CTA C . A A . A A GA C . G C . . A AC C GTGGTGTTTCAGTATCAC G GATTTTCAAAC A T GC C AA T AA A . T . . C T G T TG . T . . . . . . T C A G T A . T TC T C . A AA G
blockSeqs : A C . . G . C GTT AA T A GAT TGTG A A . . TAA G C . TTTA C T CACCG T . A AA TCG . . . . . A . GAA G . T ATTTATTGAAGCAGCAACAGGTAAAATGTTGTTATGTGATGACGCATTATATAAATTA . . AT G . TG . TT T AAA . . . CC TC T T . T CA T T TT G T . . TGA . AT TAC A C TT . CGTTAA . CTA A C T . T AC T A A G . . ATC . . AGATAAATAACATTACAGT C T . G CAT . A . TAT GC A A AT C T A GT G GC . T . . CATGA . . T A T . C GT C A T T A . T . . TCCTTGC C TGT A . A G . G T TC T . C T . . A AA A AGCAGGTTGCGTTTC G CATGTTAAAA A T GG A TA T CA . . . A . T GA T C . . . .
blockSeqs : A C . . G . C AGT AA T A AAT CATG T T . . TC G C . AC G T ACTTG G . A TG GCT . . . . . T . AAA A . T GTAAATGTGCCTGGTAACGTTCATTACTATTATTGTAAAATAAAGAA . . CT G . GA . A A T . . . . TA . T . C GA A C TA A A . . A . GA ACA A T GA . AAGAGT . AGT C C T . G TG . T C A . . AA . . GACATTTCGTTGAGTACAC G C . A T . A . TAT TT T T TC T T C . A TT . G . . AC . . . T A . A TC T C G T A . . . . CCCTCGC C TGT A . A . . . T . . . T A . . . . C ATTCGACTTTA . TTAAAA G T TT A TA T AA
blockSeqs : A A . . A . T CG AA A C GTC TGTG T . . . AG G C . AC C T AGACG T . A AA TCG . . . . . A . AAA T . T . . . . . GA . G A A . . . . AA . A . . AC A T AA G T . . T . GA ATA T T AT . ATTTA . AAA C T A . G TT . T T . . . A . . AAAATTTCGCTTTGTAAT G C . G T . T . AAG TT T A TC G C A . A AT . G . . . TC T C G T . . . . . TCC C CT A . . . . . . . . TTAAAA A T A C AA
blockSeqs : C . . G . A GG AA T A GAT T T . . . T . C . AC C T CAG . . A AA TCG . . . . . . . . G . . AA . T . . AC G T CA T T . . T . A . . . AT . GT . AAA T T A . G A . T T . . . A . . AAATATGTTATGACATT . . . . . . T . CAA . . G . G C A . . AT .
blockSeqs : C . . . . . . . . . . . . . T . . .
blockSeqs : . . .
blockSeqCons : AGT AA* A*** G** CCA** TTT** GGA GT NCACTGCCC******** NN
originalCons : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCGGTAGNNTGACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTT--ATTCAAAAC--ATCTTNAAC--ATCT-GAAGTNA-AGNTA---CCATCAT--CCAGA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCCA--------GAATT--CTTNGACTG-ATCGNCATTATATATCAT--TAAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGA--NCGGAGAC-T-GCCTTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
finalCons : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCAGTAGAA-GACTTGGGTATNGGGTTA---ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNC---AAAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AAC-GT-------T---A-TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTTG--TTCAAAAC--ATCTTNAAC--ATCT-GAAGTNA-AGNTA---CCATCATCCA--GA-AGTTT--AACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATAGATTTCCA--------GAATT--CTTGGACTG-ATCGNCATTATATATCAT--TAAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--T----TAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTAT--TATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---TGTGTTTG-TGANCACTGCCC--------TCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--AAACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): ACAACAGGTAAAAATGAACATGTGTTGTTGACACATAATATAAATAAGAAAAACTGTTGGTTTTTTCACTTGTTTAGAATATGTTATTATTATTATTACTACTATTTCCTAAATCATCTACAATTTCCATTAGTATTAATGGTTAGTCTTGAATCCTAACACTTATCTTTCCAATTATTTCCAAAATGTTACATTTTTTTATATATATATTGAATGAAATATCCTTTTGTATTTTTAAC
Unaligned ( gi|20 ): GATTTTTAACATATCTTCATAAAATATTTTCGGCATCGAAAAAAATTAATACAAATAATTGTCTTTATTTTATGACATTTAAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111111 22222 22222222 222222222222222 11111 11111111 22222222222 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 222222 111 22222 111111 222 222 11111111111 3333333333333 1 11 1111111111 1 1111 111111 4444444444444444444444444444444444 1 333333333 111111 11 1111 11111 222222222222222 1111 1 33333333333 3333333 1111 11 11111 3333333333333333333333333333333333 22222222222222222222222222222222222 111111111 111 2222222 11 1 22 11 111 11 1111 5555555 111 11 11 111 77777777777777 4444444 1 222 333333 1 1 11 1 1 1 11 11 222 6666666666666
lowQualScore : 1 1 4 4 2 4 6 0 0 777 33333333 1 9999 55555 66666 0 1 0 9 3 55 999 1 5 3 33333 3 1 22222222 0 55 3 1 77 9999 3 777 777 555555555555555 4 22222 0 44444444 00000000000 1 777 8888888 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 66 66 999 22 8888 0 66 22 111111 2 1 5555 555 11111 4 444444 0 22 111 44 333 3 11 1 1 22 1 88888888888 0000000000000 77 0 88 8888 66 777 3 22 8888 4444444444 4 333 1 0 1 1 0 0 55 1 555 3 7777 1 1 4 4 777777 4 4 2222222222222222222222222222222222 2 0 1 2 1 777777777 55 55 55 555555 0 77 2 8888 88 0 1 1 1 33 1 11 0 4444 4 11111 888888888888888 5 2 2 1 66 0 0000 1 22 1 1 9999 1 2 3 7 99999999999 6666666 666 1 6666 1 9999 4 0 2 8 999 2 88 0 4 5 1 1 5 11 1 777 77777 2222222222222222222222222222222222 3 99999999999999999999999999999999999 1 1 22 1 22 1 11 1 555555555 6 111 7777777 1 5 1 1 22 6 99 99 3 6 1 1 88 1 1 1 4 1 1 99 1 66 1 66 5 1 33 2 1 1 8 1 3 0 444 8 0 8 0 11 0 7777 1 3 0 0 1 0 3 1111111 1 1 6 0 3 0 777777 1 222 3 0 11 0 11 444 8 00000000000000 1 3333333 7 7 7 3 6 7 333 7 888888 0 1 1 1 1 1 0 6 7 0 5 2 6 55 7 7 3 1 0 0 3 6 3 3 88 44 6 0 333 6 3333333333333 3
lowQualScore : . . . . . . . . . ... ........ . .... ..... ..... . . . . . .. ... . . . ..... . . ........ . .. . . .. .... . ... ... ............... . ..... . ........ ........... . ... ....... ............................................................................................................................................... .. .. ... .. .... . .. .. ...... . . .... ... ..... . ...... . .. ... .. ... . .. . . .. . ........... ............. .. . .. .... .. ... . .. .... .......... . ... . . . . . . .. . ... . .... . . . . ...... . . .................................. . . . . . ......... .. .. .. ...... . .. . .... .. . . . . .. . .. . .... . ..... ............... . . . . .. . .... . .. . . .... . . . . ........... ....... ... . .... . .... . . . . ... . .. . . . . . . .. . ... ..... .................................. . ................................... . . .. . .. . .. . ......... . ... ....... . . . . .. . .. .. . . . . .. . . . . . . .. . .. . .. . . .. . . . . . . . ... . . . . .. . .... . . . . . . . ....... . . . . . . ...... . ... . . .. . .. ... . .............. . ....... . . . . . . ... . ...... . . . . . . . . . . . . . .. . . . . . . . . . . .. .. . . ... . ............. .
lowQualScore : 1 0 0 0 3 0 3 5 7 000 66666666 0 6666 66666 44444 8 0 5 1 6 00 999 8 9 3 00000 5 8 11111111 1 66 6 0 88 0000 6 000 000 000000000000000 0 22222 8 55555555 00000000000 0 000 9999999 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 11 11 888 00 8888 9 11 77 444444 0 0 3333 666 99999 4 444444 7 44 888 33 555 2 66 0 2 66 0 99999999999 7777777777777 00 6 55 5555 66 000 0 22 5555 8888888888 0 333 0 7 0 4 6 8 55 0 222 2 1111 0 6 0 0 111111 0 0 8888888888888888888888888888888888 5 8 4 0 4 999999999 55 44 55 111111 8 33 4 0000 11 7 0 0 2 11 4 99 8 3333 4 11111 222222222222222 0 0 8 4 11 4 6666 8 99 3 9 4444 3 7 3 3 77777777777 6666666 999 1 0000 7 4444 4 7 4 9 777 6 66 9 5 0 1 0 0 99 1 111 00000 3333333333333333333333333333333333 9 88888888888888888888888888888888888 0 0 88 0 00 0 88 7 666666666 3 777 5555555 0 2 0 0 00 7 77 22 5 7 7 7 88 0 0 0 0 7 0 33 9 00 0 44 7 7 66 7 4 4 0 0 8 8 000 0 6 0 8 00 8 0000 4 2 6 8 0 6 2 4444444 4 0 0 8 8 6 444444 4 444 2 8 00 8 22 000 0 00000000000000 0 3333333 3 3 3 3 7 3 333 3 333333 7 0 0 0 0 0 7 7 3 0 5 5 7 77 3 3 3 0 7 7 3 7 7 3 33 00 7 7 333 7 3333333333333 7
consensus : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CCGCAGTA---GAA---G----ACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNCA---AAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AACG--T-------T-A--TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTTGT--TCAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCATC--CAGA-AGTTTA--ACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATA----------GATTTCCAGAATT---CTTNGACTGATCGNCATTATA-TAT----CAT-T---AAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--TTAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTATT--ATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---T-G-T---GTTTGTGANC----ACTGCCCTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--A--AACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
Reference ( family-173 ) : AATGCAATNCCTCTAT-AAGA-AAGGGGGTCTCTTGGGT-CNGCAGTA---GAA---G----ACTTGGGTATNGGGTT-A--ATGATACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAANAAAACATGTA-AAAA--ATANAACGGACGT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TATT-ATCNATACCACGNGCTTTACC-TCGCTTT-GCATTTTCA---ACGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGNCA---AAT---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AACG--T-------T-A--TTAC----GA--TC---AT-TA---GTTCTTATG--GGATCA-ACAGTAGAGTTATAAAGGTTA-----CT--AAA--ATC--TTTCTCCCACTTGT--TCAAAAC--ATCTTNAACA--TCT-GAAGTNA-AGNTA---CCATCATC--CAGA-AGTTTA--ACTTCCATNGGTAT-TGAC-TTTT---TCTTGTNATNGTTTACGCCNATCTTACCGATA----------GATTTCCAGAATT---CTTGGACTGATCGNCATTATA-TAT----CAT-T---AAGCANTTCATTTTGT----ANTTTAA----ACCAAT-AAAGACGTTTNGACTTTTGNACCTCTCTATCAAATAAC--TTTCNAGCAT-GTACAGT--ANTCAGA-T-TTAAG--TTTATT-TTT-TAGATA-A-T----ANCA--TTAC----AGT----TTAAGCAACCTTT-TTCGG--T------TA--C-AA--ACAT-A----GTTCCATANNTCNG---NCAANCTCTCGNTCCACCANGGTTTACCAGGTCTGCGCCTTTTATT--ATTG-T-----TAAT---G-CCGCAA---TA-TACAGNCTTAAAGGGTAGC-CGGTTATACAT----TTCATNCTTAACTATGCTACACCAACCAT---TATAAGC-ACTATCGATATCA---T-G-T---GTTTGTGANC----ACTGCCCTCCAACTCTGTCAATAGCGGTATT----AACATCGGTAA-CAATA--TCNGTACCAGCCAGAAAATCA-TCTGGCANATTA-TGT--ACGTCAAATTTATCGTANC-CATCA----GTAACGTCCGGTT---TAT-----TC-GTA--A--A--AACAGTTGG----AT-T----TTCA--------AAA-------TTNATACNCCATNTTAANANNGAATGATCTGGNATACNAGTTGGAG-----CA--ATTGCACGAATATT---ATTAC---AAAGGTTNACGGNATCAACAGCNCNNACAAC-TGAAAAATCTATCG--AACAGTGATAA-ATTATCATGACTTACTAAAT-CAGNAGTCAACAACNGAANAACCTTTAGTAGAAATAGATGTAAAATCGTTGTTTANAA--AATTTCNNCCATTNAG-CATAC-ACATATTGGCGTTGATAAGAAATTCAATTAAAACATCACCA-AATGCATTNGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-CGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-T-----GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATNACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T-AT-------TTTGCGATTNTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACGTTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTNGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTNGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTNTGAAACCGATCCCGTAGAANCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCGTTNTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGGTTATTCTTTAATGAAGACTTGGGGGACATTACCT-TANTTTTATCGGCGCTAGATTTCAACTTAGCGATTACCACGCC-GGCTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCG-ACAGAAACAGAATTAATTTTCAGGCCGT---GTGAAATAAGTGAGTTGACC---TT-C----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|1 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-C----GTC---GGA---GCTTGACTTAGGTATAGGATTTATCATAATAGATTTACCC-A-TAA-AGATGGAATAAAA-CCTGTATTAAAACAAAAATTAAAAAGAACATGTT-AAAC--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTATTTAGCATTTTCA---ATAGCTT---ATT---------------TTACT-TCT----TGAATAGATATAT--------GCTCATC---CAA-----AATAA---AAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AACA--T-------T-A--TTAT----GA--TC---AT-TA---GTTCTTATG--GGATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCATTTTTACTTAAAAC--ATCCTTAACA--TCT-GAAGTGA-AGCTA---CCATCATC--CAAA-AGT-----ACCTCCATTGGAAT-TGAC-CTTT---TCTTGTTATTATGTATGCCTAGTTTACCAATA----------GTTTTCCAGAATT---CTTCG---GATCATTATT-TA-TAT----CAT-T---TAATATTTCATCTTGT----ATTTTAT----ACTAAT-GTTGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTTAT-TTT-TAGATATA-T----ACCA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAT-A----GTTCCATAAATGAG---TCAAAGTATTACTCCACCAAGGCTTTCCAA---CGCGCCTTTTCTT--ATTG-T-----TAAT---G-CCGCAA---CA-TACATACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACTAGCCAT---TAAAAGCCAC-ATCGATATCA-----------GTTTGTGAACGGAGACTGCCTTCCAAGTCTG-CAATTGCGGCATT----TACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--A--AACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTGATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACTAATATT---ATTAC---AAAGGTTGACAGCATCAACAGCACGGACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCGTGATTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGATATAGATGTAAAATCATTGTTTATAA--AA------CCATTAAG-GATAC-ACATATAAGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTAGTCTTTAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGATGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGTATGGTAAAATAACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CGAGAACAGATATGTTATAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTTCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAGAT-ATATATATGTTTGCGATTGTTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGATCTCAACACAAAATTATAACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCACTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTGGCCGTGTTCCAGCTGTGTTGGCCCTGTCTGTTAGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTTTGAAATCGATCCCGTAGAATTGTCAATTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGGTAGCCATTTTCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGTGAACCATGTAATGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATTAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGAAATTGACGGTTGTTCTTTAATGAAGACTTATGGGACATTACCT-TAATTTTATCGGCACTATATTTCAACTTAGCGATTACCACACC-GACTCTACTGTTATTATTCG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAAACAGAATTAATTTTCAGGCTAT---GTGAAATAAGTGAGTTGA--------T----CCAGATTTTCGTTGACACTTTCCGGGAGATTTCTAA
gi|10 : tgatTGTGATACCCCTGT-AAGA-CATAGGGTCACGTGGAT-CATTATTA---GCA---G----ATTTAAGGATAGGGTT-A--ATGATACCCATACCCCA-TTC-TGAGAGAATAATT-CCGGTGTTAAAACAAACATTAAATAGTACATGTA-AAAACGAGATAGC---TGT-ATCATTTTTA-AAAATTTC-TATA-G-GTA-GATC-ATCTATACCGCACGCCTTACCATC-CTTC-GAATTAAAA---ACAGCTT---TAC---------------GTATT-TCA----AAAATAG---TAA--------TATCATTTTCAAATTC--AGGCACAAAAT---C---ACT---------A---------TT-----TA----T-----TGAAGCAG----C----AACA------------G--GTAA----AA--T------------GTTGTTATG--TGATGACGCATTA----TATAAA--TTA-----GA--AAA--ACT--GTTTTTCCATTTAT--TAAGAAC--ATATTCAGTA--TT-----GTTA---TTA---ATATTTTC--CATATCGTCTACAACTTCCATTGGTAT--AATATTTT---TCTTTTGAAAACCAACACCTATCTTTCCAATACTTTTCCAAAAATTTACAGAATT---TTT------ATCA-----ATA-TCT----GA--T---AAG-AAGTCATTTTGT----ATTTTAA----ACCAAT-ATATTCGTTTAGATTTTTGAACCTCTCTATTAAA-ACC--TTTTCTGCATCGTAAAA---AGTTA-A-TACGAAGAATTTTCT-TTT-GAAAT--A-T----GTTA--TGAC----ATT----TCAAGTACCCTTT-TTC-----------TG--CAAA--ACAT-ACTTTATTCCATAAATCTG---ACAGATATTCGTTCCACCAAGGTTTACCAATTTTCCTACCTTTATT--tgacaacattcagataattatctggtgtattgtttgtcacaggagtcgcgagagagctcattttattgtttatatcttgaagatcatcagcgatctctacacgtaatgtgtttctgaaagtgtcgagtttagagtcaacatctttcttaatgcgccttagttccatgttgacgcgtttgtccaacagttgagccactttggaagatatccgttgctcaagtccggattctaacttatcaatacgctcgtacaacgaagtagaaagcatatgcatgtctgcgg
gi|11 : gctatG-CACCAA-AATGGTTTGGAAGTTACTGGCCATCAACTGATCTGCTGGGGATTGATCAAGGTGTATGTAGACGTTCTCATACTGTTTGCTAGTCTTCAGT-----TTTGG----C-TT--CTGTATCATGATCGTCGTTGGTCATGAATTTAGCAATTACAACGCCCGGTT----TGCCATCACTGGTAGAGTTCTTGCGCTGAGCACTGGCGCACA-CAACATCACTCACTCGGAGACCGTCGCGT---ATAAGAGAGTTCACCATGTTGC----TGACATTCTCATTTGCATTCTCTGGAAGGCCTCTAAg
gi|12 : ATATATAAAAGG--------CCTTCATTCTGGTATTTATAAATATCTGTTAAAAGAGTACCATAAAAA------GCAGTTACATCAAAAGAC-CTTGAAGAATTTTCAGGTGGTAAATAACAAACACATGGCAA-----------------CCTTATGATTAAACTTCAACCATAGAAATCCTTCAAACGAGT-TT-T--CTAAAATGGATATATCAAATTCATTAA---ATAAT-T-CGTTCTTGACAAAGAAACCAACTCCACCAGAACCGGCTCTAGCATTTTTATGTA---TAAC-------TTTTCGGTTCAAACCAAACCATGTATAACCTTCTAAGGTCAATTTGT-GT---TCATGAAAT---AGATGAGTTTCTGCTTATG-CTAAAATATCAATATC---AGAATTAAAAACACATAATGATCTTAAATTAAAATTGTC------AGATTCACAGTCAACACTCCAGTCACGGACGTTCCAAAACTCGGCttaatacattaagagggatctcagactgttgatgatgtgggccattggtgacaatagattcaagttttgcactcatttcgttaagttcctctgctacttcaactttgatgggatctttaaaagagtctaacttaagatcaatatccttacggacacgactcatttcagagttgacacgcttgtctaacaattgggcaaatttatttgatattctctactcgaggcttgattcaagtttgtccctgcattccttaacggaagagaacagtatgtgcatgtcagcag
gi|14 : atAATGCAACCCCTCTGT-AAGA-AAGGGGGTCTCTTGGGT-CCGTAACA---GAT---T----ACTTGGGTATTGTGTT-A--ATGATACATTTACCCCA-GGT-ATATGGAACTGTG-CCAT--TTAAA------ATTTAATAAAACATG-A-AGAA--ATAAAACGGGCGT-ATCATT--------ACA---------------------CAATACC-------TCAC------TTT-GCATTTTCA---ATGGCTT---CTT---------------TAACT-TCA----AAAACAGAGATAT--------TATCATT---AAA-----AGGCA---AAT---T---TGT---------G------------G---TG----T-----T-----Atgacagctaagtacgattactcttacctcggatgttttgccctcagttgttgttgcgacgtccattagtattgttgctataacttagtcccgctctggtccacctaacactac
gi|15 : AGTGCCAGACCTCGAT-ATGA-AAGATGATATCTTA-------CATTATCCGAACCTG----ACTTAGGAATAGGATT-T--ACGATA---TTATTCTAAGATCATATGCAACT------AATATCAAAACATATGTAAAAAAATATATGTA-AAAC--A---AGTAGACGT-ATGTTTTTTT-AAAACATC-AATT-G-GTA-TGTT-TTCTCCACTAATCGTTTTATC-CTTCTTT-GC
gi|16 : gattatgcaAT-----CC-GTA--G--A--TATATTTGC----AT-T----ATCA--------ACA-------TTCATACACCA-AGTAAGAGTTAATGATCCGCAATACCAGTTGGAA-----Cca
gi|17 : caatatccgtgtgggaacgaagactgccatccgtgatgatgtctgcacttgcgttaaaatgtcagggtcgggaacgaatgggtcaggaatgatacgtgcaaaatcgaacacgttttcagttgtttcttatacataagaTTTAGTAGAAATAGATGTATAATCGTTGTT-AGAAC-AATTTCTCCCATTTTA-CATAC-ACAT---------GATAAGAAAATCTGTAAAAAGCTCACCATAATG-ATTTGTTTTAAAATCGATAACATCCCGTTCA-ATA---ATATCACCAACGCCGATAATAAAATCGTCCATT-TCGCCACATCTACTATTGAA--GTCGTCATATATA
gi|18 : TAAAATAAACATTAACATGTACATGTA-AAAA--AT------GACATAATTTTTTTTA-AAAA-ATG-CA---G-ATA--ATTCATCGATACCACATGCCTTACC-ATTTTTC-GAA---TCAAAGACAGCTT---TAC---------------GTATT-TC-----AAAATAG---TAA--------TGTCATT------------GTCA---AAT---T---
gi|19 : taATGCAATGCTTCTGT-AAGGCAAGCGGG-CTATTTGAT-CTGTAATA---GAA---G----ATTTGGGTATTGGAAT-G--ATTATACACCTACCAAT-AAT-AAATGGAACATTT-CCATTTGAAAAACAAATATTAAACAAACAATGAAGAAAA--AT-CAAC-AAGGT-ATTAcaggtacaaaaatattatacaa
gi|2 : AATGATATACCCCTAT-AAGA-GAGTGGGTCTTTTGGGT-CGGCGG-A---GCTT--G----ACTTAGGTATAGGATT-T--ATAATAGATTTACCCCA-TAA-AGATGGAA-TACAACCTTTATTAAAACAAACATTAAAAAGAACATGTA-AAAA--GTATACCGAA-GT-ATCATTTTTA-AGAACATC-CACC-G-GTA-TTTT-ATCTATACCATGTGCTTTACC-TTTTTTA-GCATTTTCA---ATAGCTT---TTT---------------TTACT-TCT----AGAATAGATATAT--------GCTCATC---CAA-----AATAA---AAC---T---AGT---------A---------TTCG---TG----T-----T-----AC----C----AACA--T-------T-A--TTAT----GA--TC---AT-TA---GTTCTTATG--GAATCA-ATAGTAGAGTTATAAAGGTTA-----CT--ATA--ATC--TTTCTCCCACTTAC--TTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCATC--CAGA-AG---A--ACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATA----------GATTTCCAGAATT---CTTT--CGGATCATTATT-TA-TAT----CAT-T---TAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATCAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCTT--ATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCTAT---TAAAAGCCAC-ATCGATATCA-----------GTTTGTGAACGGAGACTGCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGTTAA-CAATA--CCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--A--AACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATGTTAATACTGAATGATCTGGAATACTTGTTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAATATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTCAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCTACGTGACGGGAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGTATATGTAAG-T--T-------TTTGCGATTATTACCGTACCATTGGTAACCTTCTAG-------CTGTAGTACATCACTAGCTTTAAGATGGGATTCGGC-AATGCCTATAATATCTAGGTTTAGAGAGTTCAA---ACATGATGACCTCAACATAAAATTATCACTAGTAGAATCACA------ATTCCAACCCCTAACATTCCAGAACCCGACGTGTACCTAGCAACGACCTCTATGTCCATTACCACGTCGACCATATCCTCGACCGCCACGCCTGCCATTTGCCGTGTTCCAGCTGTGTTGGCTCTGTCTGTTTGAGTTCTGACCTTGTTGACCCGAGGTTTGAGCAGCACCAGAGTGTGAAACCGATCCCGTAGAAGCGTCAGTTGAATTATCGGACCTGGGCCTCGTACTACCGCCTCGAGTATGATAGCCGTTATCACGAGTGTTACCATTGTGGTGGTTGCGTCTATTCACAACTCGCGAACCATGTAGTGACAATTTATCACCGCGGTTGATGG-CATCAATGATGGTTTTGAAATTATTAGACATCAAGCGATCGTCTCTTGTTTGGTCATTATGGATAAAAACGTCAGGATATTGACGATTATTCTTTAATGAAGACTTGGAAGACATTACCT-TACTTTTATCGGCACTAGATTTCAACTTAGCGATTACCACACC-GGCTCTACTGTTATTATTTG-ACAGTT--TACGTTCTGTACTGGCA-ACAGAGACAGAATTAATTTTCAGGCCAT---GTGAAATAAGTGAGTTGACC---TT-CTCATCCAGATTTTCGTTGACACTTTCGGGGAGATTTCTAAc
gi|21 : CAACACGTGTATCAT-TAGTGATAATT-ACCACCGCAGTTGATGGACATGAA-GAT--TTTT
gi|3 : T--ATA--ATC--TTTCTCCCATTTAC--TTAAAAC--ATCCTTAACA--TCT-GAAGTCA-AGTTA---CCATCATC--CAGA-AG---A--ACCTCCATTGGAAT-TGAC-TTTT---TCTTGTTATTATGTATGCCTATTTTACCAATA----------GATTTCCAGAATT---CTTT--CGGATCATTATT-TA-TAT----CAT-T---TAACATATCATCTTGT----ATTTTAT----ACCAAT-GATGGCGTTTAGAGCGTTGAACCTCTCTATCAAATAAC--TTTCTAGCAT-A-ACAGT--AATAAGA-T-TTGAG--TTTATT-TTT-TAGATA-AAT----AACA--TTAC----AGT----TTAACCAATCTTT-TTCAGACT------TA--C-AA--ACAG-A----GTTCCATAAATCAG---TCAAAGTATTATTCCACCAAGGCTTTCCAA---TGCGCCTTTTCTT--ATTG-T-----TAAT---G-CCGCAA---CA-TACAGACCTAAAAGGCAGC-CGGTTATACAT----TTCATGATTAACAATGTCACACCAGCCAT---TAAAAGCCAC-ATCGATATCA-----------GTTTGTGAACGGAGACTGCCTTCCAAGTCTG-CAATTGCGGCATT----AACCTTGGTAA-CAATA--TCAGTACCAGCCAAAAAATCA-TTTGGCATACTA-TGT--ACGTCAAATTTATCGTATC-CATCA----GTAACATCTGATT---TAT-----TC-GTA--A--A--AACAGTTGG----AT-T----TTCA--------AAC-------TTTATACACCATATTAATACTGAATGATCTGGAATACCTGCTGGAG-----CA--ATTGCACAAATATT---ATTAC---AAAGGTTGACGGCATCAACAGCACGTACAAC-TGAAAAATC-ATCG--AACAGTGATAA-ATTATCATGACTTACTAAA--CAGAAGTCAACAACGGAACAACCTTTAGTAGAAATAGATGTAAAATCATTGTTTATAA--AATTACGACCATTAAG-AATAC-ACATATTGGCATTAATAAGAAATTCAATTAAAACATCACCA-AATGCATTGGTCTTAAAATCAACGACATTTCTTTCACACA---A-AGAATCAACACCAACAATAAAATCAT-TGTTATCGCCACAACGGCTATTGAA--ATCTCCACATATAAACGGTA----TTCCTACATTTTGGTATTCATACATATCCGTCAAAAGATTATCGTAAAAATTAAAAGCATCCACGTGACGGAAC-------GAGTTCTCGGGAGGAAGGTAACATACGCATGGTAAAATCACGATATCTTCTGTTTTATGAGTAAGTTGTAACCAAAGAACACCTTCT--CTAGTGTTAT--CTAGAACAGATATATTAAAC-CACTTT---ACAATGT-CATTGCGAATAAAAAGTCCAACTCCCCCAGAACCCGTCCTAGCCCGT
gi|4 : AATGCAATCCCTCTTT-AAGA-AAGGGGGTCCCTTGGGT-CCGCAGTA---GAA---G----ACTTGGGTATTGGGTT-A--ATGACACATTTACCCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAGCGTG-A-AGAA--ATAAAATGGACGG-TTCATTACAC-AGAACCTC--ACTTG-GGA-TATT-ATCAATATCACAAGCTTTACC-TCGTTTT-GCATTTTCA---ACGGCTT---TTT---------------TCACT-TCA----AAAACAGATATAT--------TATCATT---GAA-----AGACA---GATTTAT---AGTGTTACTATCA---------TCCGAAATG----TCTGAAT-----GC----A----AATG--TATCTGAGC-A--TGTC----CA--TC---AC-TG---GTT-TTATG--AAAT-A-AC----GA------------A-----CT--AAA--GTC--AATTTTCCACTTGT--TCAAAAC--ATCTGAAACA------AAAGTCG-AAATAGAGCCATCAT-----GA-AGTTTA--ACTTCAAAAGGTAT---AC-ATTTAG-TTTTATACTTGTTTACACCGATCTTACCGATA----------GACTTCCAGAA-----CTTGGACTGATCAACATTACA--AT----CAT-T---AAGTAATTCATTTTTT----AAAGAGA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGGTCAAATAAT--TTACGAACTT-GTACA-T--ATTCAGA-T-TTAAG--ATC-TT-TTC-T-GACA-T-T-----TCG--TTG-----AGTACACTTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----GT-CCACATTTCTG---ATAATCTCTCGGTCCACCACTGTTTACCAGGTCTACATCTTTTATT---CTG-T-----TGAT------TAGAC---TG-TATAGTTTTAAAGGGTATT-TGATTATACAT----ATTATTCTTAACTATACTACACCAATCTT---GATAAAC-ACTATCGATATCA---T-G-TTGTGTTTATAATC----CTTGC--TCCAACT-TGTCAATAGCAATATT----AACATTAGTAAGCACT---TCTGTATTATTTAGAAA-TGAGTCTGGTAATTTA-GTT--AAATTAAATTTATCATAAC-TACTACTTTGTAGTGTTTCGTT---T-------TC-ACA--A--CGCAACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGG-------------TGCAAGAAAATTCAAATCACCTGACCTGTTTATTAAATCAACAGTCCTAACAAC-AGAAAAATCTGTAA--AACAA-GACAA-ATCATCATGACC-GC-AAATGCAATAATCTACCACTGACAAACCCTTGGTAGAAACAGATGTAAAATCGTTG-TTAGAAC-AATTTCTCCCATTTAACCATGTGACATTTTTGAGTTGA
gi|5 : ttgttAATGCAATCCCTCTAT-AAGA-AAGGGAGTCCTTTGGGT-CCGTAGTA---GAA---A----ACTTGGGTATTGGGTT-A--ATGATACATTAACCCCA-AAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAATAAAACATGAA-GAAA--A-AGAATGGACGT-ATCATT---ACACAATACCTCACTTG-GAA-TATT-ATCAATACCACAAGCTTTAAC-TCGCTTT-GCATTTTAA---ATGGCTT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----ATGCA---AAT---TTGCAGT---------ATTACTATCATTCG---AGAAGTC-----T-----ACATGTC----AATG--TGCC----T-GG-TCAT----GT--CC---AT-TA----CTATTAT------T------GTAAA---ATAACG--TA-----CT--AAA--ATC---------AACTT-T--TCAAAAC--ATCTGAAATAGATGTAGAAATAA-A---A---CCATCAT-----GA-AGTTTA--ACTTCAAAAGGTAT---AC-ATTTAGAT-TTGTACTGGTTAACACCGATCTTACCGATT----------GACTTCCAGAA-----CTTGGACTGATCGACATTACA--AT----CAA-T---AAGCAATTCATTTTGT----AAAAAAA----ACCAAT-AAAAACGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTTCAAACTT-GTACA-T--ATTCAGA-T-TTAAG-----ATT-TTT-T--------T----AACA--TTTCGTTGAGTACACTTAAGCCACCTTCGTTCGGCAT------TA--C-TA--ACATCA----GT-CCATATTTCTG---ACAATCTCTCGGTCCACCATTGTTTACCAGGTCTACATCTTTTATTGTATTGAT-----TAG----------AC---TG-TATAGTTTTTAAGGGTATA-TGGTTATACAT----ATTATTCTTAACTATATTACACTAATCCT---GATAAAC-ACTATCGATATCATGTT-G-T---GTTTGTAATC----CTTG--CTCCAACT-TGTCAATAGCAATATT----AACATCAG--A-CAGCACTTCTGTATTATTTAGAAAATAA-TCTGGTAATTTA-GTT--AAATCAAATTTATCATAAC-TATTA----CTAA-G--CGGTG---TATAAATATC-ACA--ACGC--AACA--TG--------------TTA--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATAAAAGTTGGTG-----CAAGATAACTCAAATCAT---CTGAC-----CTGTTTATTAAATCCACAGTCCTAACAAT-TGAAAAATCTGTAA--AAC-GAGACAA-ATCATCATGAC-TGC-AAATGCAATAATCTACCACTGACAAACCCTTATTAGAAATAGATGTATAATCGTTGTTAAAAC--AATTTCTCCCATTTAA-CATAC-ACATATTGGTACTGA
gi|6 : tggctA--ACCGTCATCGGTAT-T-AC-TTTTG--TCCTGTCATTTTTAATTCCGATTTGGCCAATT----------TCTTTCCAAAATTGATTTTGGTTT--TTATCATT-TA-CAT----TTTCT---A--TATTTCTGCTTGT----ACGTTAA----ACCGGT-AACTACGTTTAGTCCTTTGCACCTATCTCTCAAA--ACGTTTTCTAGCA--GAACAAT--AA----A-T---AAC--TTTATT-TTTCTTCACA-A-TTTT-ATCA--ATAC----ATT----TTAACCATTCTTT-TTTGG--T------TAAAC-AC--ACAT-T----ATTCCAAA-----G---TCAAATGTTTGCTCAACCATGGATTACCAGGTC---GCCTCTTATT---TTG-T-----AAA-------CATGA---TAATATGGGCTTGCAGGGTAGCGTAGCTA-ACAT----TTCCTCTTTAGCTAGGCTACATCAACCAT---TACATGC-ACTATCGTTATCA---TCT-T---GTGTACGAAA----ACCTCCCTCCAAGTCTA-CAATAGACGTGTT----TAC--TGATGA-TAATA--T--ATATCTGACAGAAAGTCA-CGAGGTACATT--TGTA-ACATTAAATCCATCACA-------A----ATAA-ATTCGACT---T-T----------------A--GACAGTTGGTAGTATGT----TTTATTATAGTGAAACTTATATTTAATATTCTAGCTTAAAATAGAGTGGTAGGGTAAACCAGATCGAGATAGAAA--ATTGCCTTTATTTT---ATTCC--------TTCACTAGCTCGGTTACTCTGATAATATGAGA---CT-CCGAAAATAATGATAACGTTTTTATGACTTACAAAAT--AATAGTCAACAACCGAAATGCCTTTAACAGACACAGAAGTGAAATC---ATTTAAAATGCATTTCGACCATTTAG-CATAC-ACATATAAGCGTTGATTGAAAAATCAATTAAATCATTCCCA-TACGCATTTTACTTAAAATC--CG-CATTATTATGACCTACTTA-CTCGTCAACACCAAAAATATAATCAG-CGGAATCAACACAGCTACTGTTAAAATATCTACATATATAAATAATACATGTTCCATCATTCTGATGCT------------TTAAAAGAGTTTCAAAATAGTTATGCACATCAACGCTAC--GACTT-----GAGTTCTCTGGTGGCAAATAGCG-----GTGGATAAATAACACTA---------TTAT---CAAGTTTTAACCATAAAATACATTTA--GTAGCATTATAACC--AATAGAAATGTCAAA-----TTTAGAACAAAGTAAATTTTGGATTAAAAACCCGACCCCATCAGACCCTGTTCTTGCTCTAATAT
gi|7 : gATACCTCTAT-ATGA-CATAGGATTTCTTGGAT-CTGTGTTT---CCT---G----ACTTTGGTATAGGGCT-C--ATAATGCCTAGGCCCCA-GTC-AATCGGGATCATG-CCAGTATTAAAACACACATTAAATAATATATGTA-AAAT--AGAAAAAGCA-GT-GTAATTTTTA-AGTATTTC-AGAC-G-GTA-GAGT-GTCAAGACCACTGGCATTGTC-GCTCTTA-GCACTA-AA---ACAGCCT---TAT---------------GTACG-TCT----TGAAGTGATATAT--------AAGAATT---AAAGCTTGATATA---AA--------AGC---------G---------TT-----TG----T-----A-----AC----T----GACGGTT-------T-AGATT-C-----A--TC---AT-TATC-ACCCTCCTG--G--TTA-GCTGTTACATTATACAGAT-------CTGAAAA--ACA--TGTTTTCCATTTAT--CCAAAACTGATTTTG--TA--TCC-C---TTA-AGATA---TCACCATTGTCAGA-AACC----ACTTCTATAGGTAT-TAAT-TTCT---TTTTCTGAAAGGCTATACCAACGTTCCCACTA----------GATTTCCAAAA-------------AATCTGAATTATAAGATTGAACAC-TTGAAAGCAGATCATTTTGC----AATTTAA-----CCAAT-AAAGTTGTTTCTCTTTTTGCACTTGTCTGTTAAATGTC--TTTTGAG-AC-G-ACA-TCAACTCATACC-TTAAC--CTTTTC-TTT-CACTTA-C-TTTGGTGCA--TTG-----AAT----ATA--TAA--TTT-TTCGT--T------TG--T-AATTACTT-T----ATTCCATAGCTCAGTTTACAA---CAAGTTCCACCATGGTTTCTTAA--CTGTTTTTTTTTTA--ATTA-TATAAACAAT---GTCCATAAGAGTA-TAC---TTTTGACGGTAAC-TTATCAAACAT----TTTCCGTTTAATCAACTTACA-CAATTATGAATATGA-C-ATTGT-AATATCT---T-GCT---GAATTCAAAG----GCTATGTTCTAACTCT---AA-AACAGTATTATGCAATATTTGT-A-CAATA--TTAGTTCTA--CATAAAAT-A-TCAGACTTATTATTGCAAACATCAGTTTT----TACCGCATCAC---CTAAAG-CAGGTTGCGT-T-----TC-------------ACAGTTCA----AT-TCAGATGTA--------ACT-------TTGATATTCCAGGTAAGAATAGAGTGGTCTGG
gi|8 : tATGCAATCCCT-TATTAAGC-AAGGGG-TCCCTTGGGTTCAGCAGTA---GAA---G----ACTTGGGTATTGGGTT-A--ATGATACATTTAACCCA-GAT-AGATGGAACTGTG-CCATTATTAAAACAAACATTAAACAAAACATG-A-AGAA--ATAAAACGGACGT-ACCATT---ACACAATACCTCACT-TTGAA-TATT-ATCAATACCACAAGCTTTACC-TCGCTTT-ACATTTTCA---ATGGCTTTTTTTTACTTAAAAAACAGAGTTATTATCATTAAAAGACAAATGTACAGTGTTACTATCATCCG-AGA-----AGTCT-----T---T---AAT---------G---------TAAA---TG----T-----------GC----CTGGTAACG--T-------TCA--TTAC----TA--TT---AT-T-------------------------GTAAA---ATAAAGA--A-----CT--AAATCATC--TTTC---CACTTGA--CGAAAAC--ATCTGAAATA------GATGTAG-AAATAGATTCATCAT-----GA-AGTTTA--ACTTCTAAAGGTAT---AC-ATTTAGAT-TTGTACTAGTTTAAACCGATCTTACCGATT----------GACTTCCAGAA-----CTTGGACTGATCGACATTACA--AT----CAA-T---AAGTAATTCATTTTGTGAAGAGT--------ACCAAT-AAAAACGTTTCGACTTATGTACCTCACGATCAAGTAAT--TTACGAACTG-GTACA-T--ATTCAGA-T-TTAAG-----ATC-TTT-T---T----T----AACA--TTTCGCTGAGTACACTTAAGTCACCTTCGTTCAGCAT------TA--C-TA--ACAT-A----AGTCTATATTTCTG---ACAATCTCTCGGTCCACAGCTGTTCACCAGGTCTACATCTTTTATT--G-TG-T-----TGA
gi|8 : tggttgcttACTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCGATATCA---T-G-T---GTTTGTAAT----------CCTCCAACT-TGTCAATAGCAATATT----AACATCAGTAAGCACT---TCTGT------------ATTA-TTTAGAAAATTA-GTT--AAATCAAATTTATCATAAA-TATTA----CTGA-GT--GGTG---T-T-----TCAGTATCA--C--AAC-GCAAC----AT-G----TT-A--------AAA-------GCAATGTTCCATTTTAACAAAGAATGATCTGGTATACAAGTTGGatagactcttaactatactacaccaatcctgataaacactatcgatatcatgtgtttgtaatcctccaacttgtcaatagcaatattaacatcagtaagcacttctgtattatttagaaaattagttaaatcaaatttatcataaatattactgagtggtgtttcagtatcacaacgcaacatgttaaaagcaatgttccattttaacaaagaatgatctggtatacaagttggtga
gi|9 : tggttgcttatgcaatcccttattaagcaaggggtcccttgggttcagcagtagaagacttgggtattgggttaatgatacatttaacccagatagatggaactgtgccattattaaaacaaacattaaacaaaacatgaagaaataaaacggacgtaccattacacaatacctcactttgaatattatcaataccacaagctttacctcgctttacattttcaatggcttttttttacttaaaaaacagagttattatcattaaaagacaaatgtacagtgttactatcatccgagaagtctttaatgtaaatgtgcctggtaacgttcattactattattgtaaaataaagaactaaatcatctttccacttgacgaaaacatctgaaatagatgtagaaatagattcatcatgaagtttaacttctaaaggtatacatttagatttgtactagtttaaaccgatcttaccgattgacttccagaacttggactgatcgacattacaatcaataagtaattcattttgtgaagagtaccaataaaaacgtttcgacttatgtacctcacgatcaagtaatttacgaactggtacatattcagatttaagatcttttttaacatttcgctgagtacacttaagtcaccttcgttcagcattactaacataagtctatatttctgacaatctctcggtccacagctgttcaccaggtctacatcttttattgtgttgaatagAACGGACGA-ATCATT---ACACAATACCTCACT-T-GTAATATT-ATCTATACAACAAGCTTTACA-TCGCTTT-GCATTTCCA---ATGCCCT---TTT---------------TTACT-TCA----AAAACAGATATAT--------TATCATT---AAA-----AGGCA---AAT---T---TGC---------A------------G---TG----T----------------------AACG------------A--TTACCCGAGAAGTCTAAATGTAAATGTGCCTGGGCAGGTTCA-TTACTAGTATTGTAAAG--TAAAGAACT--AAA--ATCAGCTTTTC--ACTTGT--CCAAAAC--ATCTGAAATA--GAT-GTAGAAACAGA-A---CCCTCATT-----A-ATTTTA--ACTTCAAAAGGTATACGA--TTAC---ACCTGTACTGGTTTACACCTATCTTACCGACT----------GACTTCCAGAA-----CTTTGACTGATTGACATTATA--AT----CAT-T---AAGTAATTGATTTTGT----A----AAGAGTACCAGTAAAAAATGCTTTGACTTTTGTACCTCACGATCAAATAAT--TTACGAACTT-GTACATT---TTCAAA-T-TTAAG----AATTGTTT-TAA--A-A-T----TTCGCTTTGT----AAT----CTTAGCTACCTCA-TTCGA--TTGGCAATA--C-TA--ACAT-C----AATCCACATTTCTG---GCAGTCTCTCGGTCCTTCACTGTTAATCAGGTCTATATATTTTATT--G-TG-T-----TGATTAGA-CTG------TA-T---GTTTTAAAGGGTATT-AGGTTATACATATTATTC-TTCTTAACTATACTACACCAATCCT---GATAAAC-ACTATCAATATCATGTT-G-T---GTTTGTAACC-----CT-CGCTCTAACT-TGTCAATAGCAATTAT----AACATCAGTGA-GCACG--TTTGTATTATCTAGAAAtga
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): ACAACAGGTAAAAATGAACATGTGTTGTTGACACATAATATAAATAAGAAAAACTGTTGGTTTTTTCACTTGTTTAGAATATGTTATTATTATTATTACTACTATTTCCTAAATCATCTACAATTTCCATTAGTATTAATGGTTAGTCTTGAATCCTAACACTTATCTTTCCAATTATTTCCAAAATGTTACATTTTTTTATATATATATTGAATGAAATATCCTTTTGTATTTTTAAC
Unaligned ( gi|20 ): GATTTTTAACATATCTTCATAAAATATTTTCGGCATCGAAAAAAATTAATACAAATAATTGTCTTTATTTTATGACATTTAAA