lowQualScore : 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444
lowQualScore : 1 11111111111 111 11 222222 1 1 44444444444 2222 111 11 1 22222 1 222 1 1 1 2 11 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 1 2222 1 11 11 11 8888888888888888888888888888888 22222 1 1 777777777777777777777777 1 1 11 9999999999999999 222222222 222 22222222222 1 11 11 22222222 22 1111 2222 1 3333333333 11 1 1 11 11 33333 2 55555555 11
lowQualScore : 6 3 1 5 6 77777777777 0 777 33 888888 0 0 77777777777 0 6666 777 3 0 2 2 8 33 0 2 3 2 55555 55 5 6 333 3 0 8 2 5 0 33 0 9 33 2 1 3 3 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 2 4 0 2 0 1111 0 3 0 3 33 66 66 77 6 88 3 3333333333333333333333333333333 3 00000 44 2 0 7 4 0 5 4 666666666666666666666666 0 0 0 0 33 0 0000000000000000 222222222 8 88 8 222 8 8 8 0 8 8 8 8 8 8 0 8 0 8 22 00000000000 77 1 44 5 5 5 66 5 00 5 77 55 5 00000000 77 66 8888 4444 8 88 0 4 7777777777 33 0 0 0 33 0 11 6 6 00000 0 99999999 3 44 4 4 4 4 1
lowQualScore : . . . . . ........... . ... .. ...... . . ........... . .... ... . . . . . .. . . . . ..... .. . . ... . . . . . . .. . . .. . . . . ............................................................................................................................................................................................................................................................................................................................................................................................................................................................. . . . . . .... . . . . .. .. .. .. . .. . ............................... . ..... .. . . . . . . . ........................ . . . . .. . ................ ......... . .. . ... . . . . . . . . . . . . . . .. ........... .. . .. . . . .. . .. . .. .. . ........ .. .. .... .... . .. . . .......... .. . . . .. . .. . . ..... . ........ . .. . . . . .
lowQualScore : 0 7 0 0 0 00000000000 8 555 88 888888 0 0 55555555555 2 2222 555 2 2 5 5 8 88 0 5 5 0 00000 55 0 0 555 2 0 8 2 0 0 55 0 0 88 5 0 7 7 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 5 2 0 5 0 2222 8 0 0 2 88 88 55 77 0 77 7 0000000000000000000000000000000 7 77777 33 7 7 7 7 7 0 0 444444444444444444444444 2 0 8 0 88 2 0000000000000000 000000000 0 88 0 000 6 0 0 8 0 0 0 0 0 0 8 0 8 0 66 44444444444 00 4 44 7 7 7 44 7 00 7 99 99 7 77777777 99 99 7777 0000 0 88 0 0 2222222222 88 0 0 2 88 2 44 7 7 55555 8 22222222 9 22 4 4 4 4 0
consensus : TCGTNTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCA-AAATCTGTCGCCGTCAATCACAGATGTCGACAAAAG---CCCAGAG--ACT------GAAGGACCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGNTAGAATACAACAACAGA--AGAGAA-AAATGAACAGACAC-----CTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTGCA-ATTCCTCTTGTTTATAAAGACCAGTCGTGTCCCNCGNATAAAGGACA-----GNCCCNNCCNNNCACGNNTT-GTNTC-NCGCA--GA-AAA--------GGACGGATGTGAGTCAGTTATCGAGNGNNATTACAGGAATCAAAACGNCACGAGCGGGAANGCA--TNGACGNGTCGGNGTGGANCTGACGTCACACGTCTAAACCTGTATTACACACGTCCGTCTGCGTGACAGGT-----ATT--GGGT-GTG-TT--A-CACA--TNTCCG---GTGT--GACG--TCAGA--T--------CAGG-TC-----TGG-NTGA---ATCA------CGA-T-TGG-ACA--ATCT--------------CATCTTGACAG--ACAC-----AACAGG-AGACACTATA-------TACC--------GTGTGA-AGA--------TATANCATCG---T---------------G---GTA------T--AGGAGGGTTACA-CACAGTGA-ACA----GTTCTGGNGAAC-TGATTTAT--ATAGACAGN-AANNATAACGTCANNAAACTGTCTATAGACAANAAAACAGTNACCACACTGTTAGAGAGACC-ACATCACCATGG--ATACC-AGC--TGTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCG-GA-TGCGTAACGCTAANACNAAGACGGGCAAGNTAACCCGGTACAACAGTACAGGACAACAGCGTAAC-CT-ATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-CGT-CT---------GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGN-NCTGTATACGTA-T-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-GGGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCNTCA-GGA--------TC--ATC-ACTA-CGNCCACGN-GGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCT-CCNTCAGG-A--------TC--ATCA-C-TATCACC--ACGCGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCACGCAGCCTG-AACTATGA-TGACAAA--NC-TCACCTTCTCTGGGTCGGATCA-GGTG-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
Reference ( gi|2 ) : TTGTGTTCTCTTGGCAGGAATCCAAACGGGTATCCAAACTTGTCCTCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGA--AGAGAA-AAATGAACAGACGC-----CTCACCCACCTACAGAACTATGAGGATATATATGAACAA-TCAGCCAACAGAGTGCTACA-ATTCCTCATTTTTATTAAGACCAGTCGTGTTCCCCAGATAAAGGACA-----NNNNNNNNNNNNNNNNNNTTCGTGTC-CCCCA--GATAAA--------GGACAGTTGT-AGTCAGTTATTGAGTGCCATCACAGAAATCCAAACGTCA--A-CAGGAAACCAATTAGACGAGT--GTGTGAAACTGATGTT-CAC------ACCTGTATTACACGCGGCTTTCCGTGTGACAGAT-----GTTAGGGAT-GTG-TT--A-CACA--TATCTG---ATGT--GACG--TCAGACNT--------CAGG-TC-----TGG-GT-----ATC-------TGA-T-TGGTACA--ATCT--------------CATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------CACC--------GTGTGGCAGA--------TATAGCATCA---T---------------G---GTA------TAGAGGAGGACTACA-CACAGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAGT-AAATATAACATCAACAAACTGTCTATAAACAGTAAAACAGTCACCACACTGTTAGAGTGGCCTACATCATCATGG--AGACC-AGCT-TGTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-CGCGTAACTCTGATACAAGGACAGGCACGATAACCCGGTACAACAGTACAGGACAACAGNGTAACCCTCATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-GGTACA---------GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACAA-CCTGTATATGTA-T-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AATGGT-GATATTAT-TGTGTCTAACTTGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-GGGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCACCA-GGA--------TC--ATC-TCTA-CATCCACTA-GGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCT-CCTTCAGG-A--------TC--ATCA-C-TATCACC--ACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGTAGCCTG-AACTATGA-TGATAAA--TC-TCACCTACTCTGGGTCGGATCA-GATGACACCAACACAGTGC-GT-GTAT-A-TAGA-TATANTG
gi|3 : TCGTATTCTCCTGGCAGAAATCCAAACTGATATCCAAACTTGTCCCTCACAAATCGGTCACCGTCAGTCACCGATGTCAACAAAGG---CCCAGAG--ACT------AAAGGACCTGATTG-ACATC-ATGGT-----------ATGTGATGTTA---CAAGA---TACAGAGATGCATTGATTCATAGAATGCAACAACAGA--AGAGAA-AATTAAACAGACAA-----CTTTTTCACATACAGAACTATGAACATAGATATGAACAA-TCAACAAACAGAGTGGTGCA-GTTCCTCTTGTTTATAAAGTTCAGTCGTATTCCCCATATAAAAAACA-----GTCCTAGTCAGTTATTGA---GTGTCATCACA--GA--------------AC---------TC------CAAATATCA--ACAGGA----AAACGACA--AGTAGGAATGC---TCGAAGA-----TGTGAAACTGACGTC-CAC------ACCTGTATCACATACGTCTGTCTGTGTGAGAGGT-----AT------T-GTA-TT--A-CACA--CGTCTGTCCGTGTAAGAGGTATTAGACGTGTGATTCACATA-TC-----TGGTGTGAC--GTCAGAACCGCGA-TATGG-ATA--ATCTGATGTAAAGAAATTCATCCTGATAG--ACAT-----AACAGG-AAACATAATA-------TACC--------GTG
gi|4 : cacacagtataaagtacgacattgctctcaatgtcagggggacaccgagtactactgttacacgtgtaaacatggtctgtgtttacagtgtaaagagagacatgtcattgatgtagataccaaacaccatggtgtcgtaatttaccgtgagaaattcaaatgcgtcccttcccgagagacctgtgtcaaacatccacacatcaaatacctgtactgtgatcagtgtaagtattccatgtgctatcgttgcacagatcatcgaacttacaagctgatagatcttagaacagcctatcaaactaagcgacatcaacacagaacattcattgccaatatcagaagtgagactctctataactgTCGTCTTCTCTTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCAAAAATATCTCACTGTCAATCACAGATGTCAACAAACG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-ATGGT-----------ATGTGATACCAAAACAAGA---TACAGAGATTTATTGATTGCTAGAATAAAACATCAGA--AGAGAA-AAATGAACAGTCAC-----CTCACCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCCAACAGAGCGATACA-ATTCCTC-TTTTTATAAAGACCAGTCGTATCCCGCAAATAAAGGACA-----
gi|1 : gtaattaatgatatgtatatgttgataacattattatgatgtgctatataattatactgtctgtttattttcagcagattgtatccctaaagacccagacctccacatcatggacacactaggactcagtacacagtataaagtacgacattgttctcaatgtcaggaggacaccgagttctactgtcacacgtgtaaaaatgatctttgtttactgtgtaaagaaagacatgtcattcatctaaacaccatacaacatgatgttgtaatttatcgtgagaggtttggctacatcccgagacatgagatctgcgtccggcatccagacaggatctatgaaatgttctgtcagtcctgtgaactttctgtctgtttccaatgtctagagcaccgaaaacaccaaatattggacattagaacagcctatcaaacaaagcgacaacaacaccgaaaaatcattgacaacatcagaagtgagagtctctataactgTGTTCTCCTCGCAGGGATCAAAACTGATATCCAAGC------------AATCTGTGGCCGTCTATCACAGGTGTTGATAAAAG---CCCAGAG--ACT------GAAGGACCTGATTG-ACACT-GTGGT-----------ATTTGATGTTA---AAAGAAGGTACAAACGTTTACTCATTGAGAGAATACAACAACAGA--GGCGAA-TAATGAA-----GCATTTTCTAACCCACATACAGAACTATCAAGACAAATATGAACAA-TCAGCAAACAGAGCGGTGCA-ATTTCTCTTGTTTATAAAGACCAGTAATGTCCCTCGGATAAAGGACACCCCTAATCCTCCTCTACACGCCTTGCTTTC-ACTGAGTGAGAAATTCAACATGGA-GGATGTGAGTCAGTTATTGAGGGAAATTACAGAAATCAAAA--TCACGA-CGGGAAA--A---AGACATGTCGGAATAGACCTGA-GTTACACGTCTAAACCTGAGTTACACAAGTCTGTCTGCGTGACAGGT-----ATTATAAATGGTGTTT--ATCACA--TATCCT---GTGT--GACG--TCAGA-----------CAGGATC-----TGG-ATGAGTGATCA------TAA-T----TACA--ACCT--------------CATCTTGACAG--ACAC-----AACAGG-AGTCACTATT-------CACC--------ATCTAACAGA--------TATAACATGGAATT---------------G---GTA------T---GGAGGGTTACA-CACAGTGA-ACA----GTGCTGGGGAAC-TAATTTAT--ATCGATAGC-AACGATGCCGTCACTAAACTATCTGTAGACAACAAAAGAGTCACCATACTGTTAAAGAGA---ATAAAACCATGG--TTTCCTAG-G-TGTGTGTACTATTCCCCCTCCAGTGGGGATTTGTTTGTCG-GATTGTGGAACCCAAAAACTAAGAAGGGTAAGGTAACCCGGTTCAACAGTAAAGGaccctaatcttccacaacacctgctgcttt
gi|6 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcaTCAACAAAAGAAGCACAGAGTGACTCTCTTTGAAGGATCTGGTTGGACACTAGTGGTTAAGTAGAATGATATCATGTTA-----AGA---TACAG-GGTTTATTAATTGCTA-ATTA-ACCAACAGAATAGAGAATAGATATACAGACAC-----CTTGTTAAAATACGAGACTATGAAGA-A-ATATG-ACAACTGGGCAAACAGAGCGGTACGTAT--CTCGTGTTTA-TAAAAC--GTCACGTcgaccacgtcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|4 : TCGTATC-CCGCA--AATAAA--------GGACAggcctcgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactacaaatcctgtattaccacagtcttctgtgtgacaggtttgggggtcggggtgtgttgggcacagctttctgtggacgtcagatcaggccgttcttggttatgtgatttaaaacagtatccattggacagcagcaccgccaaacaggaaggaactatatttattttgcccttctaaagtgtgaagagattctactatagaccgtgtttgtaaggaatcacatcaagtgagacataatatcttggtaaacatgattattcatagacagtgagatattatggattagtatggaaccaaaactgttctagataataa
gi|6 : gtaattaatgatatgtatatgttgataacattattatgatgtgctatataattatactgtctgtttattttcagcagattgtatccctaaagacccagacctccacatcatggacacactaggactcagtacacagtataaagtacgacattgttctcaatgtcaggaggacaccgagttctactgtcacacgtgtaaaaatgatctttgtttactgtgtaaagaaagacatgtcattcatctaaacaccatacaacatgatgttgtaatttatcgtgagaggtttggctacatcccgagacatgagatctgcgtccggcatccagacaggatctatgaaatgttctgtcagtcctgtgaactttctgtctgtttccaatgtctagagcaccgaaaacaccaaatattggacattagaacagcctatcaaacaaagcgacaacaacaccgaaaaatcattgacaacatcagaagtgagagtctctataactgtcgtcttctcttggcaggaatccaaactgatatccaaacttgtcccccaaaaatatctcactgtcaatcacagatgtcaacaaacgcccagagactgaaggatctgattgacactatggtatgtgataccaaaacaagatacagagatttattgattgctagaataaaacatcagaagagaaaaatgaacagtcacctcacccacatacagaactatgaagacagatatgaacaatcagccaacagagcgatacaattcctctttttataaagaccagCCTGTATTAC-CACAGTCTTCTGTGTGACAGGTTTGGGGGTCGGGGT-GTG-TTGGG-CACAGCTTTCTG----TG---GACG--TCAGA--T--------CAGG-CCGTTCTTGG-TT-----ATG-------TGATT-TAAAACAGTATC---------------CAT-TGGACAGCAGCACCGCCAAACAGGAAGGAACTATATTTATTTTGCCCTTCTAAAGTGTGA-AGAGATTCTACTATAG-ACCG---T---------------GTTTGTA---------AGGA--ATCACATCA-AGTGAGACATAATATCTTGGTAAACATGA-TTATTCATAGACAGTGAGATATaccctaatcttccacaacacctgctgcttt
gi|5 : tcaacaaaagaagcacagagtgactctctttgaaggatctggttggacactagtggttaagtagaatgatatcatgttaagatacagggtttattaattgctaattaaccaacagaatagagaatagatatacagacaccttgttaaaatacgagactatgaagaaatatgacaactgggcaaacagagcggtacgtatctcgtgtttataaaacgtcacgtggcctcgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactacaaatATCTTGACAG--ACAC-----AACAGG-AGACACTATG-------TACC--------GTGTGAGAGA--------TGTGTCATTA---TTGATTGGAGGACCTGG---GTACATGTGTAGAGGAGGGATACA-CACAATGA-ACA----ATTCTGGGGAAC-TGATTTAT--ATAGACAGG-GATTATAACATCAAAAAACTGTCTATAGACAAAGAAACAGTAATCACACTGTTAGAGAGTCCTACATCACCATGGATATATC--GC--TGTGTAAACTGCTCCCCATCCACTGGAGATCTGATGGTCGCAA-TGTTTAACACTAAGATAAAGACAAGCAAGATAACCCGATACAACAGTACAGGACAACACGAT----CT-----GAC---G---ATACAGCAGGACAACACCGGTAAAGAACTGTATAGtatggattagtatggaaccaaaactgttctagataataa
gi|7 : AGGACTACA-CACAGTGA-ACA----GTTCTGGTGATC-TGATTTAT--ATAGACAAG-AAAGGCAACATTAGCAAACTGTCTAGAGACAAGAAAACAGTTACCACACTTTCAGAGAGACT---ATCAACAGTT--AGACC-A-CTGTGTGTGTAATGCTCCCCGTCCACTGGAGATCTGATGGTCGGGA-TGCATAACGCTGATACGGGTACAGGCAAGCTAACCAGGTACAACAGTACAGGACAAtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|1 : cGTGGAACCC--A-AAAACTAAG---AAG-GGTAAGGTAAC-CCGGT--TCAACAGTAAAGGCGACCA-CGTCCT---------GACCATTCCAAA-C-AACGAAGACGAA-A---GT-CACGC-TATGTATAGGAG-T-CCTTGG-TA-CAT-C-ACG-GAAAATAGG-AATGGG-GATGTTAT-TGTGTCTGAATATA-TTAAA-GATAAATGTGGTGCTGTAGTGGTGACAGAC-CAC-AGGGGGAGATA-TCG-ATTTTCCT-ACA--AG-GG----T--CCTCGG-GAA--------TC--GCC-ACTA-CGACCAGTA-GGAATCTG-TACGGACGTGC-TGTCgatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|7 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattGCATAACGCTGATA---C---GGGTACA-GGCAAGCTAAC-CAGGT--ACAACAGTACAGGACAAGA-TCTAGACCGAATCTTGACCAT-----A-G-AAG-ACAACAGG-ACCGGT-CAAAT-GTTGTATGCTTA-T-CC-ACACTA-TAT-C-ACA-GAAAATACA-AACGGT-GATATTAT-TGTGTC-----TGA-TT-CG-CACAATC---GTGCTGTAGTGGTGACAGAG-CGC-TGGGGGAGACA-TCG-ATTCTCGT-ACA-CAG-GAC-C-T--ACATCA-GGA--------TC--ATC-ACTA-TTACCATGG-GGAATTTG-TACAGACGAAC-TGTCaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|5 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatATAAA-----G---ACA-AGCAAGATAAC-CCGAT--ACAACAGTACAGGACAACACGAT-CT---------GACGAT-----A-C-AGC-AGGACAAC-ACCGGT-AAAGA-ACTGTATA-GTAAT-CCTATA-TA-TAT-C-ACA-GTGAATAAG-AACGGT-GATATTAT-TGTGTCTGACT-----------ATAACCATGGTGCTTTAGTGGTGACAGAG-CGC-GGGGGGAGACA-TCG-ATTCTCCT-ACA-AAG-GAC-C-T--CCATCA-GGA--------TC--ATT-ACTA-GATCCACGT-GGAATATG-TACAGATGCGC-TGTCacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|12 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagAT-----ATC-AGC-ACGACGAC--CCGGT-CACA--CCTGTATATGTA-TTCCTAGA-TAGTAT-CCACATGAGAATAGGGAATGGT-GATATTATGTGTGTCTAACTTGAATTACAATATAACCATGGTGCTGTAGTGGTGACAGAGCCGC--GGGGGAGACA-TCG-ATTCTCCTAACA-CAGCGACTC-T--CGATCA-GGA--------TC--ATC-ACTA-Cacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|13 : aAT-----A-CCAGC-ACGACGACCACCGGTTCACAAACCTGTATATGTA-T-CCTAGA-TA-TATTC-ACA-GAGAATAGG-A-TGGTTGATATT-T-TGTGT-TAACTCGA-TTACA-TATAAC-ATGGTGCTGTA-TGGTGACAGAG--GCTGGGGGGAGACA-TCG-ATTCTCCT-ACA-CCG-GAC-C-TTGCCATCA-GGA--------T---ATC-ACTA-
gi|9 : aGACAGAGGCGC-GGGGGGAGACA-TCG-ATTTTCCT-ACA-CAG-AA--C-T--CCTTCAGGGA--------TCCTATCACCTATCA-CCACAC-GGAATCTGTTACAGACGCGC--GTC
gi|8 : GACA-AG-CGCGGGGGGGAGACAGTCGCATTTTCCT-ACAGCAG-AAC-CTT--CCTTCA-GGAATCCCCCCTC--ATCAACTATCATCCAACACGGAATCTG-TA-AGACGCGCTTGTCacacatcctggtgtgggatattagcaccagcaccagtacaggattgattgacaagggacggtccactctgttctcttttaactgacaccacaaaaatgggatatacataccatacaggtctaactatgatgacaaaaattcaccttcctggtcggatcagcaccaaaacagtggtgtatatagatatgttacaggaggtactcctctgacttggaagtactagtagtactgttagtctac
gi|8 : AACCTTCCTTCAGG-AATCCCCCCTC--ATCAAC-TATCATCCAACACGGAATCTaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacatatccatacagtctggaacttgaatgacaaagaatcaccttctctgggtcggatcaatccacaaaaacagtgtggtgtatcatagatagtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|5 : gacaagcgcgggggggagacagtcgcattttcctacagcagACCT-CCATCAGG-A--------TC--ATTA-C-TAGATCC--ACGTGGAATgtaagacgcgcttgtcaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacatatccatacagtctggaacttgaatgacaaagaatcaccttctctgggtcggatcaatccacaaaaacagtgtggtgtatcatagatagtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|7 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagataaagacaagcaagataacccgatacaacagtacaggacaacacgatctgacgatacagcaggacaacaccggtaaagaactgtatagtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggACCT-ACATCAGG-A--------TC--ATCA-C-TATTACC--ATGGGGAATTTatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|9 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatgcataacgctgatacgggtacaggcaagctaaccaggtacaacagtacaggacaagatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggCT-CCTTCAGGGA--------TCCTATCA-CCTATCACC--ACACGGAATCTgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|8 : gacagaggcgcggggggagacatcgattttcctacacagaaTCCATACAGTCTGGAACT-TGAATGACAAA--GAATCACCTTCTCTGGGTCGGATCA--AT-CCACAAAAACAGTGTGGT-GTATCA-TAGA-TAgttacagacgcgcgtcacacatcctggtgtgggatattagcaccagcaccagtacaggattgattgacaagggacggtccactctgttctcttttaactgacaccacaaaaatgggatatacataccatacaggtctaactatgatgacaaaaattcaccttcctggtcggatcagcaccaaaacagtggtgtatatagatatgttacaggaggtactcctctgacttggaagtactagtagtactgttagtctac
gi|1 : gacaagcgcgggggggagacagtcgcattttcctacagcagaaccttccttcaggaatcccccctcatcaactatcatccaacacggaatctgtaagacgcgcttgtcaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacataCCACGGAGCCTG-GGTTATGA-TGATAAA--TC-TCACCTTCTCTGGGTCGGATCACGGTGG-AACAAAACAGTGT-AT-GTAT-A-CAAA-TATAgtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|5 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattgtggaacccaaaaactaagaagggtaaggtaacccggttcaacagtaaaggcgaccacgtcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagCCACTCAGCCTG-AACTATGA-TGATAAA--AC-TCACCTTCTCTGGGTTGGAGCATGGTG----CAACAAAGTAT-CA-ATAT-A-TAGA-TATAtagagaggag
gi|7 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagataaagacaagcaagataacccgatacaacagtacaggacaacacgatctgacgatacagcaggacaacaccggtaaagaactgtatagtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaCCGCGAGGCCTG-CACTATGA-TGATGAA--AC-TCACCTTCTCTGGGTCGGATCT-TTCAACACCAAAACAGTAT-CT-GTAT-A-TAGA-TATtagagaggaggtactctctgactggtaagtaatcgtagta
gi|14 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatgcataacgctgatacgggtacaggcaagctaaccaggtacaacagtacaggacaagatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaCCATACAGTCTG-AACTATGA-TGACAAA--AA-TCACCTTCTCTGGGTCGGATC---AT-CCACAAAAACAGTGT-GT-GTAT-A-TAGA-TATgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|9 : ggatatacata-AACTATGA-TGACAAAAAT--TCACCT--TCCTGGTCGGATCA-G----CACCAAAACAGTG--GT-GTAT-A-TAGA-TATGTgtacagaggaggtactctctgactggtaagtactagtagtactgt
gi|11 : gacagaggcgcggggggagacatcgattttcctacacagaactccttcagggatcctatcacctatcaccacacggaatctgttacagacgcgcgtcacacatcctggtgtgggatattagcaccagcaccagtacaggattgattgacaagggacggtccactctgttctcttttaactgacaccacaaaaatgggatatacataccatacaggtctCCAACACAGTGT-GTGGTAT-A-TAGATTATATacaggaggtactcctctgacttggaagtactagtagtactgttagtctac
gi|15 : CCAACACCGTGT-GT-GTAT-ATTAGA-TAcagaggagtactctctgaaatcggtaagtactagtagtactgtagtttattgtactagtagtatcagttaagtacaataacataaaacaaaaataggaagccattataaattatttggatgaacatgtatattgtttaggaggtgtggagtctgagataattaagtttacagatagagcttagttatagattacagtat
gi|16 : CAACACAGTGT-GT-GTAT-A-TAGA-TATAatacaggggttactctctgattggtaatactagtgtctgatagtttat
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|10 ): AATATTTAAGATATTGATATATTCTATAGTAATTGTGATTTTCCAAGCAATTATAATGTCTATTTTTAGCACAATGAGTTACTAAAGAGCCAGATCTTCACATAATGATCAGAGCACGACACAGTACAAAGTATAAAGTACGACATTGCTCTCAATGCCAGGGGAACACCGAGTACTACTGTCACACGTGTAAACATGATCTGTGTTTACAGTGTAAAAATAAACATGATGCAGAAAAAAACACCAAATATCACCACGTAGTTATCTA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111
lowQualScore : 2 1 111 11 222222 33333333333 1111 111 11 111 2222222222222222222222222222222222222222222222222222222222222222 222222222 4444 44444444444444444 1 22 55555555 1 11 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 11 22222 2222222 22222222 333333333333 00000000000000000000000000000000 11111 1111 11 11 33333333333 22 11 333333333333333 1 2 1 555555555555555555555555555 111 11 55555555555555555 11111 11111 1 1111 111 11111111 1111 1111111111111111 555555555555555555555555555555555555555555555555555 4444444444
lowQualScore : 1 3 00 0 0 2 2 444 11 333333 8 8 88888888888 9999 444 0 1 5 11 8 444 66 6 1 0 8 0 8 0 1 5 1 33 44 6666666666666666666666666666666666666666666666666666666666666666 0 333333333 88 6 1 1111 0 88888888888888888 1 0 1 2 44 11111111 3 0 44 2 7 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 11 00000 8 2 6666666 99999999 888888888888 33 99999999999999999999999999999999 66666 2 8 8 7777 1 8 0 11 99 22 11 44444444444 1 1 1 66 0 3 0 33 444444444444444 0 0 0 0 0 6 1 1 2 1 3 000000000000000000000000000 0 444 6 8 11 11111111111111111 66666 777 6 6 6 11111 0 6 6 6 6 6 6 6 6 0 6 6 6666 88 5 5 000 5 5 5 5 5 77 5 66 5 5 5 88888888 66 5 5 0000 6 44 6 6 6666666666666666 1 6 111111111111111111111111111111111111111111111111111 0 5 5 5 5 666 3333333333 5 4 4 4 4 4
lowQualScore : . . .. . . . . ... .. ...... . . ........... .... ... . . . .. . ... .. . . . . . . . . . . .. .. ................................................................ . ......... .. . . .... . ................. . . . . .. ........ . . .. . . ........................................................................................................................................... .. ..... . . ....... ........ ............ .. ................................ ..... . . . .... . . . .. .. .. .. ........... . . . .. . . . .. ............... . . . . . . . . . . . ........................... . ... . . .. ................. ..... ... . . . ..... . . . . . . . . . . . . .... .. . . ... . . . . . .. . .. . . . ........ .. . . .... . .. . . ................ . . ................................................... . . . . . ... .......... . . . . . .
lowQualScore : 0 2 55 0 0 0 8 000 00 000000 0 0 00000000000 0000 000 8 0 0 00 0 000 00 4 4 8 0 6 0 8 0 0 0 00 00 2222222222222222222222222222222222222222222222222222222222222222 7 000000000 00 7 0 0000 7 00000000000000000 0 7 0 0 33 00000000 2 0 88 0 0 5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 00 00000 0 2 0000000 00000000 222222222222 55 00000000000000000000000000000000 22222 2 0 0 0000 0 0 8 00 00 00 00 00000000000 0 0 2 55 2 2 2 88 888888888888888 2 0 0 0 2 5 0 0 0 0 2 000000000000000000000000000 8 000 7 0 00 00000000000000000 77777 555 7 7 7 88888 5 7 7 7 7 7 7 7 7 7 7 7 0000 22 2 0 111 0 0 0 0 0 55 0 99 9 0 0 11111111 99 0 0 5555 7 77 7 7 0000000000000000 0 0 000000000000000000000000000000000000000000000000000 4 7 7 7 7 111 4444444444 5 0 0 0 0 0
consensus : TCGTGTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCACAAA-TCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTACA-ATTCCTCTTGTTTATAAAGACCAGTCGTGTCCCCCAGATAAAGGACANCC-----CTANTCNTNCACGCCTT--G-TGTC-NC---GC-AGA-AA---A----GGACGG-TGT-AGTCAGTTATCGAG-G--ATCACAGAAATCAAAACGTCA--AGCGGGAAANC---TAGACGAGT--GTGTGAAACTGACGTT-CAC----AAA-CCTGTATTACACAC-GTCTGTCTGTGTGACAGGTATTA-----GGGG------TGTGTTA--CACA--TATCTG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCGTGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------TACC--------GTGTGACAGA--------TATAGCAT----------------------CG---TGT--GTATAG--GAGGACTACA-CACAGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-GAAATATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTCACCACACTGTTAGAGAGACCTACATCACCA--TGG--ATACC-AGC--T-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTC-GCGA-TGCGTAACNCTGANACGAGGACAGGCAAGATAACCCGGTACAACAGTACAGGACAA----CAG--CG-----TAACC-C--ATAAAAC---GACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CGA-T-C-T-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGANC-TGTATATGTA-T-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCATCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGCAG-CCTG-AACTATGA-TGAC-AAAAC-TCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
Reference ( family-1752 ) : TCGTNTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCA-AAA-TCTGTCGCCGTCAATCACAGATGTCGACAAAAG---CCCAGAG--ACT------GAAGGACCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGNTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTGCA-ATTCCTCTTGTTTATAAAGACCAGTCGTGTCCCNCGNATAAAGGACAGNC-----CCNNCCNNNCACGNNTT--G-TNTC-NC---GC-AGA-AA---A----GGACGGATGTGAGTCAGTTATCGAGNGNNATTACAGGAATCAAAACGNCACGAGCGGGAANGCA--TNGACGNGTCGGNGTGGANCTGACGTCACACGTCTAAA-CCTGTATTACACAC-GTCCGTCTGCGTGACAGGTATTG-----GG--------TGTGTTA--CACA--TNTCCG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCACGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGACACTATA-------TACC--------GTGTGA-AGA--------TATANCAT----------------------CG---TG---GTATAG--GAGGGTTACA-CACAGTGA-ACA----GTTCTGGNGAAC-TGATTTAT--ATAGACAG-NAANNATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTNACCACACTGTTAGAGAGACC-ACATCACCA--TGG--ATACC-AGC--T-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTC-G-GA-TGCGTAACGCTAANACNAAGACGGGCAAGNTAACCCGGTACAACAGTACAGGACAA----CAG--CG-----TAACC-T--ATAAAAC---GACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CG--T-C-T-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGNNC-TGTATACGTA-T-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCNTCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCNTCAGGATCATCACTATCACCACGCGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCACGCAG-CCTG-AACTATGA-TGAC-AAANC-TCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
gi|1 : CATGTTCTCCTCGCAGGGATCAAAACTGATATCCAAGC------------AA-TCTGTGGCCGTCTATCACAGGTGTTGATAAAAG---CCCAGAG--ACT------GAAGGACCTGATTG-ACACT-GTGGT-----------ATTTGATGTTA---AAAGAAGGTACAAACGTTTACTCATTGAGAGAATACAACAACAGAG--GCGAA-TAATGAA---GCATTTTCTAACCCACATACAGAACTATCAAGACAAATATGAACAA-TCAGCAAACAGAGCGGTGCA-ATTTCTCTTGTTTATAAAGACCAGTAATGTCCCTCGGATAAAGGACACCCCTAATCCTCCTCTACACGCCTT--GCTTTC-ACTGAGTGAGA-AATTCAACATGGA-GGATGTGAGTCAGTTATTGAGGGAAATTACAGAAATCAAAA--TCACGA-CGGGAAAA-----AGACATGTCGGAATAGACCTGA-GTTACACGTCTAAA-CCTGAGTTACACAA-GTCTGTCTGCGTGACAGGTATTATAAATGG--------TGT-TTAT-CACA--TATCCT---GTGT-----------GACGT--------CAGA---CAGGATC-----TG--GAT-GAGTGATCATAAT-T-----ACA--ACC--------------TCATCTTGACAG--ACAC-----AACAGG-AGTCACTATT-------CACC--------ATCTAACAGA--------TATAACAT----------------------GGAATTG---GTAT-G--GAGGGTTACA-CACAGTGA-ACA----GTGCTGGGGAAC-TAATTTAT--ATCGATAG-CAACGATGCCG--TCA---------CTAAACTATCTGTAGACAACAAAAGAGTCACCATACTGTTAAAGAGAAT-AAA--ACCA--TGG--TTTCCTAGG--T-GTGTGTACTATTCCCCCTCCAGTGGGGATTTGTTTGTC-G-GATTGTGGAACCCAAAAACTAAGAAGGGTAAGGTAACCCGGTTCAACAGTAAAGG-CGA----CCA--CG-----T
gi|1 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggAACC-C--A-AAAACTAAGAAG-GGTAAGGTAAC-CCGGT--TCAACAGTAAAGGCGACCA-------CG--T-CCT-GACCATTCCAAA-C-AACGAAGACGAA-A---GT-CACGCTA-TGTATAGGAG-T-CCTTGG-TA-CAT-C-ACG-GAAAATAGG-AATGGG-GATGTTAT-TGTGTCTGAATATA-TTAAA-GATAAATGTGGTGCTGTAGTGGTGACAGAC-CAC-A-GGGGGAGATA-TCG-ATTTTCCT-ACA--AG-GG----T--CC-TCG-GGAA--------TC--GCC-A-CTA-CGACC-AGTAGGAATCTG-TACGGACGTGC-TGTCcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|1 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattgtggCCACGGAG-CCTG-GGTTATGA-TGAT-AAATC-TCACCTTCTCTGGGTCGGATCACGGT----G-GAACAAAACAGTGT-AT-GTAT-A-CAAA-TATATaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|11 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattgtggaacccaaaaactaagaagggtaaggtaacccggttcaacagtaaaggcgaccacgtcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagCCAACACAGTGT-GTGGTAT-A-TAGATTATATTagagaggag
gi|12 : AT-----ATC-AGC-ACGACGAC--CCGGT-CAC-ACC-TGTATATGTA-TTCCTAGA-TAGTAT-CCACATGAGAATAGGGAATGGT-GATATTATGTGTGTCTAACTTGAATTACAATATAACCATGGTGCTGTAGTGGTGACAGAG-C-C-GCGGGGGAGACA-TCG-ATTCTCCTAACA-CAGCGACTC-T--CGATCA-GG-A--------TC--ATC-A-CTA-Ccagaggagtactctctgaaatcggtaagtactagtagtactgtagtttattgtactagtagtatcagttaagtacaataacataaaacaaaaataggaagccattataaattatttggatgaacatgtatattgtttaggaggtgtggagtctgagataattaagtttacagatagagcttagttatagattacagtat
gi|13 : aAT-----A-CCAGC-ACGACGACCACCGGTTCACAAACCTGTATATGTA-T-CCTAGA-TA-TATTC-ACA-GAGAATAGG-A-TGGTTGATATT-T-TGTGT-TAACTCGA-TTACA-TATAAC-ATGGTGCTGTA-TGGTGACAGAG--GCTG-GGGGGAGACA-TCG-ATTCTCCT-ACA-CCG-GAC-C-TTGCCATCA-GG-A--------T---ATC-A-CTA-
gi|14 : aCCATACAG-TCTG-AACTATGA-TGAC-AAAAA-TCACCTTCTCTGGGTCGGATCA---T----C-CACAAAAACAGTGT-GT-GTAT-A-TAGA-TATGT
gi|15 : ggatatacataCCAACACCGTGT-GT-GTAT-ATTAGA-TAacagaggaggtactctctgactggtaagtactagtagtactgt
gi|16 : CAACACAGTGT-GT-GTAT-A-TAGA-TATATatacaggggttactctctgattggtaatactagtgtctgatagtttat
gi|2 : TTGTGTTCTCTTGGCAGGAATCCAAACGGGTATCCAAACTTGTCCTCCACAAA-TCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACG---CCTCACCCACCTACAGAACTATGAGGATATATATGAACAA-TCAGCCAACAGAGTGCTACA-ATTCCTCATTTTTATTAAGACCAGTCGTGTTCCCCAGATAAAGGACANNN-----NNNNNNNNNNNNNNNTTC-G-TGTC-CC---CC-AGATAA---A----GGACAGTTGT-AGTCAGTTATTGAGTGCCATCACAGAAATCCAAACGTCA---ACAGGAAACCAATTAGACGAGT--GTGTGAAACTGATGTT-CAC------A-CCTGTATTACACGC-GGCTTTCCGTGTGACAGATGTTA-----GGGA------TGTGTTA--CACA--TATCTG---ATGT-----------GACGT--------CAGACNTCAGG-TC-----TG--GGT------ATC-TGAT-T--GGTACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------CACC--------GTGTGGCAGA--------TATAGCAT----------------------CA---TG---GTATAGAGGAGGACTACA-CACAGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-TAAATATAACA--TCA---------ACAAACTGTCTATAAACAGTAAAACAGTCACCACACTGTTAGAGTGGCCTACATCATCA--TGG--AGACC-AGC--TTGTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTC-GCGA-CGCGTAACTCTGATACAAGGACAGGCACGATAACCCGGTACAACAGTACAGGACAA----CAG--NG-----TAACC-CTCATAAAAC---GACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------GG--TAC-A-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACAACC-TGTATATGTA-T-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AATGGT-GATATTAT-TGTGTCTAACTTGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCACCA-GG-A--------TC--ATC-T-CTA-CATCC-ACTAGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGTAG-CCTG-AACTATGA-TGAT-AAATC-TCACCTACTCTGGGTCGGATCA-GAT----GACACCAACACAGTGC-GT-GTAT-A-TAGA-TATANTacagaggaggtactctctgattggtaagtactagtagta
gi|3 : TCGTATTCTCCTGGCAGAAATCCAAACTGATATCCAAACTTGTCCCTCACAAA-TCGGTCACCGTCAGTCACCGATGTCAACAAAGG---CCCAGAG--ACT------AAAGGACCTGATTG-ACATC-ATGGT-----------ATGTGATGTTA---CAAGA---TACAGAGATGCATTGATTCATAGAATGCAACAACAGAA--GAGAA-AATTAAACAGACA---ACTTTTTCACATACAGAACTATGAACATAGATATGAACAA-TCAACAAACAGAGTGGTGCA-GTTCCTCTTGTTTATAAAGTTCAGTCGTATTCCCCATATAAAAAACAGTC-----CTAGTCAGTTA----TTGAG-TGTCATC---AC-AGA-------------AC---T-----CCAAATATCA---------ACAGG----AAAACGACA--AGTAGGAATGC---TCGAAGA-----TGTGAAACTGACGTC-CAC------A-CCTGTATCACATAC-GTCTGTCTGTGTGAGAGGTAT-----------------TGTATTA--CACA--CGTCTGTCCGTGTAAGAGGTATTAGACGTGTGATTCACATA--TCTGG-TG-----TGACGTCAGA---ACCGCGATAT--GG-ATA--ATCTGATGTAAAGAAATTCATCCTGATAG--ACAT-----AACAGG-AAACATAATA-------TACC--------GTGg
gi|4 : cacacagtataaagtacgacattgctctcaatgtcagggggacaccgagtactactgttacacgtgtaaacatggtctgtgtttacagtgtaaagagagacatgtcattgatgtagataccaaacaccatggtgtcgtaatttaccgtgagaaattcaaatgcgtcccttcccgagagacctgtgtcaaacatccacacatcaaatacctgtactgtgatcagtgtaagtattccatgtgctatcgttgcacagatcatcgaacttacaagctgatagatcttagaacagcctatcaaactaagcgacatcaacacagaacattcattgccaatatcagaagtgagactctctataactgTCGTCTTCTCTTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCA-AAAATATCTCACTGTCAATCACAGATGTCAACAAACG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-ATGGT-----------ATGTGATACCAAAACAAGA---TACAGAGATTTATTGATTGCTAGAATAAAACATCAGAA--GAGAA-AAATGAACAGTCA---CCTCACCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCCAACAGAGCGATACA-ATTCCTCTT-TTTATAAAGACCAGTCGTATCCCGCAAATAAAGGACAACC-----CTAATCTTCCAC
gi|5 : gtaattaatgatatgtatatgttgataacattattatgatgtgctatataattatactgtctgtttattttcagcagattgtatccctaaagacccagacctccacatcatggacacactaggactcagtacacagtataaagtacgacattgttctcaatgtcaggaggacaccgagttctactgtcacacgtgtaaaaatgatctttgtttactgtgtaaagaaagacatgtcattcatctaaacaccatacaacatgatgttgtaatttatcgtgagaggtttggctacatcccgagacatgagatctgcgtccggcatccagacaggatctatgaaatgttctgtcagtcctgtgaactttctgtctgtttccaatgtctagagcaccgaaaacaccaaatattggacattagaacagcctatcaaacaaagcgacaacaacaccgaaaaatcattgacaacatcagaagtgagagtctctataactgATCTTGACAG--ACAC-----AACAGG-AGACACTATG-------TACC--------GTGTGAGAGA--------TGTGTCATTATTGATTGGAGGACCTGGGTACA---TGT--GTAGAG--GAGGGATACA-CACAATGA-ACA----ATTCTGGGGAAC-TGATTTAT--ATAGACAG-GGATTATAACA--TCA---------AAAAACTGTCTATAGACAAAGAAACAGTAATCACACTGTTAGAGAGTCCTACATCACCA--TGGATATATC--GC--T-GTGTAAACTGCTCCCCATCCACTGGAGATCTGATGGTC-GCAA-TGTTTAACACTAAGATAAAGACAAGCAAGATAACCCGATACAACAGTACAGGACAA----CA---CG-------ATC-T------GAC---GATACAGCAGGACAACACCGGTAAAGAACTGTATAGaacacctgctgcttt
gi|5 : --ATAAA-----GACA-AGCAAGATAAC-CCGAT--ACAACAGTACAGGACAACA-------CGA-T-C-T-GACGAT-----A-C-AGC-AGGACAAC-ACCGGT-AAAGAAC-TGTATA-GTAAT-CCTATA-TA-TAT-C-ACA-GTGAATAAG-AACGGT-GATATTAT-TGTGTCTGACT-----------ATAACCATGGTGCTTTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-AAG-GAC-C-T--CCATCA-GG-A--------TC--ATT-A-CTA-GATCC-ACGTGGAATATG-TACAGATGCGC-TGTCtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|5 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagCCACTCAG-CCTG-AACTATGA-TGAT-AAAAC-TCACCTTCTCTGGGTTGGAGCATGGT----G-CAACAA---AGTAT-CA-ATAT-A-TAGA-TATATacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|6 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagataaagacaagcaagataacccgatacaacagtacaggacaacacgatctgacgatacagcaggacaacaccggtaaagaactgtatagtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaTCAACAAAAGAAGCACAGAGTGACTCTCTTTGAAGGATCTGGTTGGACACTAGTGGTTAAGTAGAATGATATCATGTTA-----AGA---TACAG-GGTTTATTAATTGCTA-ATTA-ACCAACAGAATAGAGAATAGATATACAGACA---CCTTGTTAAAATACGAGACTATGAAGA--AATATGA-CAACTGGGCAAACAGAGCGGTACGTAT--CTCGTGTTTATAAAagagaggaggtactctctgactggtaagtaatcgtagta
gi|6 : AAATCCTGTATTAC-CACAGTCT-TCTGTGTGACAGGT-TTG-----GGGGTCGGGGTGTGTTGGGCACAGCTTTCTG----TG------------GACGT--------CAGA--TCAGG-CCGTTCTTG--GTT------AT-GTGAT-TTAAA-ACAGTATC---------------CAT-TGGACAGCAGCACCGCCAAACAGGAAGGAACTATATTTATTTTGCCCTTCTAAAGTGTGA-AGAGATTCTACTATAG-AC----------------------CG---TGTTTGTA-AG--GA--ATCACATCA-AGTGAGACATAATATCTTGGTAAACATGA-TTATTCATAGACAGTGAGATATTATGGATTAGTATGGAACCAAAACTGT-TCTAGATAATAAacgtcacgtggcctcgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactacaaatcctgtattaccacagtcttctgtgtgacaggtttgggggtcggggtgtgttgggcacagctttctgtggacgtcagatcaggccgttcttggttatgtgatttaaaacagtatccattggacagcagcaccgccaaacaggaaggaactatatttattttgcccttctaaagtgtgaagagattctactatagaccgtgtttgtaaggaatcacatcaagtgagacataatatcttggtaaacatgattattcatagacagtgagatattatggattagtatggaaccaaaactgttctagataataa
gi|7 : tcaacaaaagaagcacagagtgactctctttgaaggatctggttggacactagtggttaagtagaatgatatcatgttaagatacagggtttattaattgctaattaaccaacagaatagagaatagatatacagacaccttgttaaaatacgagactatgaagaaatatgacaactgggcaaacagagcggtacgtatctcgtgtttataaaacgtcacgtggcctcgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactacAGGACTACA-CACAGTGA-ACA----GTTCTGGTGATC-TGATTTAT--ATAGACAA-GAAAGGCAACA--TTA---------GCAAACTGTCTAGAGACAAGAAAACAGTTACCACACTTTCAGAGAGAC---TATCAACAGTTAG----ACC-A-CTGT-GTGTGTAATGCTCCCCGTCCACTGGAGATCTGATGGTCGG-GA-TGCATAACGCTGATACGGGTACAGGCAAGCTAACCAGGTACAACAGTACAGGACAAGATCTAGACCGAATCTTGACCAT--AGAAGAC---AACA-GG
gi|7 : cACA-GGCAAGCTAAC-CAGGT--ACAACAGTACAGGACAAGATCTAGACCGAAT-C-TTGACCAT-----A-G-AAG-ACAACAGG-ACCGGT-CAAATGT-TGTATGCTTA-T-CC-ACACTA-TAT-C-ACA-GAAAATACA-AACGGT-GATATTAT-TGTGTCTGATTCG-----CA-CA-----ATCGTGCTGTAGTGGTGACAGAG-CGC-T-GGGGGAGACA-TCG-ATTCTCGT-ACA-CAG-GAC-C-T--ACATCA-GG-A--------TC--ATC-A-CTA-TTACC-ATGGGGAATTTG-TACAGACGAAC-TGTCaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|7 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatgcataacgctgatacgggtCCGCGAGG-CCTG-CACTATGA-TGAT-GAAAC-TCACCTTCTCTGGGTCGGATC----TTTCAA-CACCAAAACAGTAT-CT-GTAT-A-TAGA-TATGTacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|8 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatgcataacgctgatacgggtacaggcaagctaaccaggtacaacagtacaggacaagatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaGACA-AG-CGCGG-GGGGGAGACAGTCGCATTTTCCT-ACAGCAG-AAC-CTT--CCTTCA-GG-AATCCCCCCTC--ATCAA-CTATCATCCAACACGGAATCTG-TA-AGACGCGCTTGTCatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|8 : TCCATACAG-TCTGGAACT-TGAATGAC-AAAGAATCACCTTCTCTGGGTCGGATCA--AT----C-CACAAAAACAGTGTGGT-GTATCA-TAGA-TAaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacatatccatacagtctggaacttgaatgacaaagaatcaccttctctgggtcggatcaatccacaaaaacagtgtggtgtatcatagatagtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|9 : gacaagcgcgggggggagacagtcgcattttcctacagcagaaccttccttcaggaatcccccctcatcaactatcatccaacacggaatctgtaagacgcgcttgtcaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacataGACAGAGGCGC-G-GGGGGAGACA-TCG-ATTTTCCT-ACA-CAG-AA--C-T--CCTTCAGGG-A--------TCCTATC-ACCTA-TCACC-ACACGGAATCTGTTACAGACGCGC--GTCgtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|9 : CCATACAGGTCT--AACTATGA-TGACAAAAAT-TCACCTTC-CT-GGTCGGATCA--------G-CACCAAAACAGTG--GT-GTAT-A-TAGA-TATGTTacacatcctggtgtgggatattagcaccagcaccagtacaggattgattgacaagggacggtccactctgttctcttttaactgacaccacaaaaatgggatatacataccatacaggtctaactatgatgacaaaaattcaccttcctggtcggatcagcaccaaaacagtggtgtatatagatatgttacaggaggtactcctctgacttggaagtactagtagtactgttagtctac
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): AATATTTAAGATATTGATATATTCTATAGTAATTGTGATTTTCCAAGCAATTATAATGTCTATTTTTAGCACAATGAGTTACTAAAGAGCCAGATCTTCACATAATGATCAGAGCACGACACAGTACAAAGTATAAAGTACGACATTGCTCTCAATGCCAGGGGAACACCGAGTACTACTGTCACACGTGTAAACATGATCTGTGTTTACAGTGTAAAAATAAACATGATGCAGAAAAAAACACCAAATATCACCACGTAGTTATCTA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111 111111111111111111111111111
lowQualScore : 111 11 222222 33333333333 1111 111 11 111 11 2222222222222222222222222222222222222222222222222222222222 6666666666 22 33333 2222 1 1 44444444 1 555555555555 22 11 555555555555555555 33333333 111 77777777777777777777777777777777777777777777777777777777777 11 22222 2222222 22222222 33333333 000000000000000000000000000 1 1111 11 1111 11 11 33333333333 1111 11 333333333333333 1 3333333333333333 11 4444444444444 1 11111 11111 1111 111 11111111 1111 1111111111111111 55555555555555555555555555555555555555555555555555 4444444444
lowQualScore : 0 3 00 2 444 11 333333 8 8 88888888888 9999 444 0 5 11 8 444 66 6 1 0 8 0 8 0 1 5 11 0 1 1 2222222222222222222222222222222222222222222222222222222222 0 0000000000 7 6 00 0 11111 4444 2 3 00000000 3 0 8 1 111111111111 0 6 33 33 1 555555555555555555 66666666 777 66666666666666666666666666666666666666666666666666666666666 11 00000 8 1 6666666 99999999 8 66666666 22 000000000000000000000000000 5 9999 3 0 11 8 7777 0 8 0 11 8 11 11 44444444444 1 0 5555 0 33 444444444444444 0 8 0 0 1 1 4 0 3 6 3 4444444444444444 8 8 11 1111111111111 0 66666 777 6 6 6 00000 5 6 6 6 6 6 6 6 6 0 6 6 1111 6 5 5 000 5 5 5 5 5 77 5 66 3 5 5 88888888 66 5 5 0000 6 44 6 6 6666666666666666 00000000000000000000000000000000000000000000000000 0 5 5 5 5 5 3333333333 5 4 4 4 4 4
lowQualScore : . . .. . ... .. ...... . . ........... .... ... . . .. . ... .. . . . . . . . . . .. . . . .......................................................... . .......... . . .. . ..... .... . . ........ . . . . ............ . . .. .. . .................. ........ ... ........................................................... .. ..... . . ....... ........ . ........ .. ........................... . .... . . .. . .... . . . .. . .. .. ........... . . .... . .. ............... . . . . . . . . . . . ................ . . .. ............. . ..... ... . . . ..... . . . . . . . . . . . . .... . . . ... . . . . . .. . .. . . . ........ .. . . .... . .. . . ................ .................................................. . . . . . . .......... . . . . . .
lowQualScore : 2 2 55 5 000 00 000000 0 0 00000000000 0000 000 8 0 00 0 000 00 4 4 8 0 6 0 8 0 0 00 2 0 0 7777777777777777777777777777777777777777777777777777777777 7 7777777777 3 7 00 7 00000 0000 0 3 88888888 2 0 8 2 555555555555 2 5 88 88 2 888888888888888888 22222222 000 55555555555555555555555555555555555555555555555555555555555 00 00000 0 4 0000000 00000000 8 22222222 88 555555555555555555555555555 5 5555 2 8 00 0 0000 6 0 8 00 0 66 00 00000000000 0 2 5555 2 88 888888888888888 2 8 0 2 0 0 2 8 2 5 2 8888888888888888 0 0 00 0000000000000 0 77777 555 7 7 7 22222 7 7 7 7 7 7 7 7 7 7 7 7 8888 7 2 0 111 0 0 0 0 0 55 0 99 6 0 0 11111111 99 0 0 5555 7 77 7 7 0000000000000000 00000000000000000000000000000000000000000000000000 4 7 7 7 7 7 4444444444 5 0 0 0 0 0
consensus : TCGTGTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTACA-ATTCCTCTTGTTTATAAAGACCAGT--CGTGTCCCCCAGATAAAGGACANCCCTAATC-----NTNCACGCCTT--G-TGTC-NC---GC-AGA-AA---A----GGACGGT-GT-AGTCAGTTATCGAG-G---ATCACAGAAATCAAAACGTCAAG-CGGGAAANC---TAGACGAGT--GTGTGAAACTGACGTT-CAC----AAA-CCTGTATTACACAC-GTCTGTCTGTGTGACAGGTAT-----T---AGGGGTGTGTTA--CACA--TATCTG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCGTGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------TACC--------GTGTGACAGA--------TATAGCAT----------------------CG---TGTGTATAG--GAGGANTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-GAAATATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTCACCACACTGTTAGAGAGACCTACATCACCA--TGG--ATACC-AGC--T-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-TGCGTAACNCTGANACGAGGACAGGCAAGATAACCCGGTACAACAGTACAGGACAACAGCGTAACCC--ATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGANC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCATCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGCAG-CCTG-AACTATGA-TGAC-AAA-ACTCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
Reference ( family-1752 ) : TCGTGTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTACA-ATTCCTCTTGTTTATAAAGACCAGT--CGTGTCCCCCAGATAAAGGACANCCCTANTC-----NTNCACGCCTT--G-TGTC-NC---GC-AGA-AA---A----GGACGGT-GT-AGTCAGTTATCGAG-G---ATCACAGAAATCAAAACGTCAAG-CGGGAAANC---TAGACGAGT--GTGTGAAACTGACGTT-CAC----AAA-CCTGTATTACACAC-GTCTGTCTGTGTGACAGGTAT-----T---AGGGGTGTGTTA--CACA--TATCTG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCGTGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------TACC--------GTGTGACAGA--------TATAGCAT----------------------CG---TGTGTATAG--GAGGACTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-GAAATATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTCACCACACTGTTAGAGAGACCTACATCACCA--TGG--ATACC-AGC--T-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-TGCGTAACNCTGANACGAGGACAGGCAAGATAACCCGGTACAACAGTACAGGACAACAGCGTAACCC--ATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGANC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCATCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGCAG-CCTG-AACTATGA-TGAC-AAA-ACTCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
gi|1 : CATGTTCTCCTCGCAGGGATCAAAACTGATATCCAAGC------------AATCTGTGGCCGTCTATCACAGGTGTTGATAAAAG---CCCAGAG--ACT------GAAGGACCTGATTG-ACACT-GTGGT-----------ATTTGATGTTA---AAAGAAGGTACAAACGTTTACTCATTGAGAGAATACAACAACAGAG--GCGAA-TAATGAA---GCATTTTCTAACCCACATACAGAACTATCAAGACAAATATGAACAA-TCAGCAAACAGAGCGGTGCA-ATTTCTCTTGTTTATAAAGACCAGT--AATGTCCCTCGGATAAAGGACACCCCTAATCCTCCTCTACACGCCTT--GCTTTC-ACTGAGTGAGA-AATTCAACATGGAGGAT-GTGAGTCAGTTATTGAG-GGAAATTACAGAAATCAAAA--TCACGACGGGAAAA-----AGACATGTCGGAATAGACCTGA-GTTACACGTCTAAA-CCTGAGTTACACAA-GTCTGTCTGCGTGACAGGTAT-----TATAAATGGTGT-TTAT-CACA--TATCCT---GTGT-----------GACGT--------CAGA---CAGGATC-----TG--GAT-GAGTGATCATAAT-T-----ACA--ACC--------------TCATCTTGACAG--ACAC-----AACAGG-AGTCACTATT-------CACC--------ATCTAACAGA--------TATAACAT----------------------GGAATTG-GTAT-G--GAGGGTTACACAC--AGTGA-ACA----GTGCTGGGGAAC-TAATTTAT--ATCGATAG-CAACGATGCCG--TCA---------CTAAACTATCTGTAGACAACAAAAGAGTCACCATACTGTTAAAGAGA---ATAAAACCA--TGG--TTTCCTAGG--T-GTGTGTACTATTCCCCCTCCAGTGGGGATTTGTTTGTCG-GATTGTGGAACCCAAAAACTAAGAAGGGTAAGGTAACCCGGTTCAACAGTAAAGG-CGACCACGT
gi|1 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggAACCC--A-AAAACTAAG---AAG-GGTAAGGTAAC-CCGGT--TCAACAGTAAAGGCGACCA-------CGT-C-CT-GACCATTCCAAA-C-AACGAAGACGAA-A---GT-CACGCTA-TGTATAGGA-GT-CCTTGG-TA-CAT-C-ACG-GAAAATAGG-AATGGG-GATGTTAT-TGTGTCTGAATATA-TTAAA-GATAAATGTGGTGCTGTAGTGGTGACAGAC-CAC-A-GGGGGAGATA-TCG-ATTTTCCT-ACA--AG-GG----T--CC-TCG-GGAA--------TC--GCC-A-CTA-CGACC-AGTAGGAATCTG-TACGGACGTGC-TGTCcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|1 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattgtggCCACGGAG-CCTG-GGTTATGA-TGAT-AAA-TCTCACCTTCTCTGGGTCGGATCACGGT----G-GAACAAAACAGTGT-AT-GTAT-A-CAAA-TATATaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|11 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattgtggaacccaaaaactaagaagggtaaggtaacccggttcaacagtaaaggcgaccacgtcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagCCAACACAGTGT-GTGGTAT-A-TAGATTATATTagagaggag
gi|12 : AT-----ATC-AGC-ACGACGAC--CCGGT-CAC-ACC-TGTATATGT-ATTCCTAGA-TAGTAT-CCACATGAGAATAGGGAATGGT-GATATTATGTGTGTCTAACTTGAATTACAATATAACCATGGTGCTGTAGTGGTGACAGAG-C-C-GCGGGGGAGACA-TCG-ATTCTCCTAACA-CAGCGACTC-T--CGATCA-GG-A--------TC--ATC-A-CTA-Ccagaggagtactctctgaaatcggtaagtactagtagtactgtagtttattgtactagtagtatcagttaagtacaataacataaaacaaaaataggaagccattataaattatttggatgaacatgtatattgtttaggaggtgtggagtctgagataattaagtttacagatagagcttagttatagattacagtat
gi|13 : aAT-----A-CCAGC-ACGACGACCACCGGTTCACAAACCTGTATATGT-AT-CCTAGA-TA-TATTC-ACA-GAGAATAGG-A-TGGTTGATATT-T-TGTGT-TAACTCGA-TTACA-TATAAC-ATGGTGCTGTA-TGGTGACAGAG--GCTG-GGGGGAGACA-TCG-ATTCTCCT-ACA-CCG-GAC-C-TTGCCATCA-GG-A--------T---ATC-A-CTA-
gi|14 : aCCATACAG-TCTG-AACTATGA-TGAC-AAA-AATCACCTTCTCTGGGTCGGATCA---T----C-CACAAAAACAGTGT-GT-GTAT-A-TAGA-TATGT
gi|15 : ggatatacataCCAACACCGTGT-GT-GTAT-ATTAGA-TAacagaggaggtactctctgactggtaagtactagtagtactgt
gi|16 : CAACACAGTGT-GT-GTAT-A-TAGA-TATATatacaggggttactctctgattggtaatactagtgtctgatagtttat
gi|2 : TTGTGTTCTCTTGGCAGGAATCCAAACGGGTATCCAAACTTGTCCTCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACG---CCTCACCCACCTACAGAACTATGAGGATATATATGAACAA-TCAGCCAACAGAGTGCTACA-ATTCCTCATTTTTATTAAGACCAGT--CGTGTTCCCCAGATAAAGGACANNNNNNNNN-----NNNNNNNNNTTC-G-TGTC-CC---CC-AGATAA---A----GGACAGTTGT-AGTCAGTTATTGAGTGCC-ATCACAGAAATCCAAACGTCAA--CAGGAAACCAATTAGACGAGT--GTGTGAAACTGATGTT-CAC----A---CCTGTATTACACGC-GGCTTTCCGTGTGACAGATGT-----T---AGGGATGTGTTA--CACA--TATCTG---ATGT-----------GACGT--------CAGACNTCAGG-TC-----TG--GGT------ATC-TGAT-T--GGTACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------CACC--------GTGTGGCAGA--------TATAGCAT----------------------CA---TG-GTATAGAGGAGGACTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-TAAATATAACA--TCA---------ACAAACTGTCTATAAACAGTAAAACAGTCACCACACTGTTAGAGTGGCCTACATCATCA--TGG--AGACC-AGC--TTGTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-CGCGTAACTCTGATACAAGGACAGGCACGATAACCCGGTACAACAGTACAGGACAACAGNGTAACCCTCATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA--------GG-TACA-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACAACC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AATGGT-GATATTAT-TGTGTCTAACTTGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCACCA-GG-A--------TC--ATC-T-CTA-CATCC-ACTAGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGTAG-CCTG-AACTATGA-TGAT-AAA-TCTCACCTACTCTGGGTCGGATCA-GAT----GACACCAACACAGTGC-GT-GTAT-A-TAGA-TATANTacagaggaggtactctctgattggtaagtactagtagta
gi|3 : TCGTATTCTCCTGGCAGAAATCCAAACTGATATCCAAACTTGTCCCTCACAAATCGGTCACCGTCAGTCACCGATGTCAACAAAGG---CCCAGAG--ACT------AAAGGACCTGATTG-ACATC-ATGGT-----------ATGTGATGTTA---CAAGA---TACAGAGATGCATTGATTCATAGAATGCAACAACAGAA--GAGAA-AATTAAACAGACA---ACTTTTTCACATACAGAACTATGAACATAGATATGAACAA-TCAACAAACAGAGTGGTGCA-GTTCCTCTTGTTTATAAAGTTCAGT--CGTATTCCCCATATAAAAAACAGTCCTAGTC-----AGTTA----TTGAG-TGTCATC---AC-AGA-------------AC--T------CCAAATATCA----------ACAGG----AAAACGACAAG-TAGGAATGC---TCGAAGA-----TGTGAAACTGACGTC-CAC------A-CCTGTATCACATAC-GTCTGTCTGTGTGAGAGGTAT--------------TGTATTA--CACA--CGTCTGTCCGTGTAAGAGGTATTAGACGTGTGATTCACATA--TCTGG-TG-----TGACGTCAGA---ACCGCGATAT--GG-ATA--ATCTGATGTAAAGAAATTCATCCTGATAG--ACAT-----AACAGG-AAACATAATA-------TACC--------GTGg
gi|4 : cacacagtataaagtacgacattgctctcaatgtcagggggacaccgagtactactgttacacgtgtaaacatggtctgtgtttacagtgtaaagagagacatgtcattgatgtagataccaaacaccatggtgtcgtaatttaccgtgagaaattcaaatgcgtcccttcccgagagacctgtgtcaaacatccacacatcaaatacctgtactgtgatcagtgtaagtattccatgtgctatcgttgcacagatcatcgaacttacaagctgatagatcttagaacagcctatcaaactaagcgacatcaacacagaacattcattgccaatatcagaagtgagactctctataactgTCGTCTTCTCTTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCAAAAATATCTCACTGTCAATCACAGATGTCAACAAACG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-ATGGT-----------ATGTGATACCAAAACAAGA---TACAGAGATTTATTGATTGCTAGAATAAAACATCAGAA--GAGAA-AAATGAACAGTCA---CCTCACCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCCAACAGAGCGATACA-ATTCCTCTT-TTTATAAAGACCAGT--CGTATCCCGCAAATAAAGGACAACCCTAATC-----TTCCAC
gi|5 : gtaattaatgatatgtatatgttgataacattattatgatgtgctatataattatactgtctgtttattttcagcagattgtatccctaaagacccagacctccacatcatggacacactaggactcagtacacagtataaagtacgacattgttctcaatgtcaggaggacaccgagttctactgtcacacgtgtaaaaatgatctttgtttactgtgtaaagaaagacatgtcattcatctaaacaccatacaacatgatgttgtaatttatcgtgagaggtttggctacatcccgagacatgagatctgcgtccggcatccagacaggatctatgaaatgttctgtcagtcctgtgaactttctgtctgtttccaatgtctagagcaccgaaaacaccaaatattggacattagaacagcctatcaaacaaagcgacaacaacaccgaaaaatcattgacaacatcagaagtgagagtctctataactgATCTTGACAG--ACAC-----AACAGG-AGACACTATG-------TACC--------GTGTGAGAGA--------TGTGTCATTATTGATTGGAGGACCTGGGTACA---TGTGTAGAG--GAGGGATACACAC--AATGA-ACA----ATTCTGGGGAAC-TGATTTAT--ATAGACAG-GGATTATAACA--TCA---------AAAAACTGTCTATAGACAAAGAAACAGTAATCACACTGTTAGAGAGTCCTACATCACCA--TGGATATATC--GC--T-GTGTAAACTGCTCCCCATCCACTGGAGATCTGATGGTCGCAA-TGTTTAACACTAAGATAAAGACAAGCAAGATAACCCGATACAACAGTACAGGACAACA-CG--ATCT------GAC---G---ATACAGCAGGACAACACCGGTAAAGAACTGTATAGaacacctgctgcttt
gi|5 : --ATAAA-----G---ACA-AGCAAGATAAC-CCGAT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACGAT-----A-C-AGC-AGGACAAC-ACCGGT-AAAGAAC-TGTATA-GTAAT-CCTATA-TA-TAT-C-ACA-GTGAATAAG-AACGGT-GATATTAT-TGTGTCTGAC-----------TATAACCATGGTGCTTTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-AAG-GAC-C-T--CCATCA-GG-A--------TC--ATT-A-CTA-GATCC-ACGTGGAATATG-TACAGATGCGC-TGTCtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|5 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagCCACTCAG-CCTG-AACTATGA-TGAT-AAA-ACTCACCTTCTCTGGGTTGGAGCATGGT----G-CAACAA---AGTAT-CA-ATAT-A-TAGA-TATATacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|6 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagataaagacaagcaagataacccgatacaacagtacaggacaacacgatctgacgatacagcaggacaacaccggtaaagaactgtatagtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaTCAACAAAAGAAGCACAGAGTGACTCTCTTTGAAGGATCTGGTTGGACACTAGTGGTTAAGTAGAATGATATCATGTTA-----AGA---TACAG-GGTTTATTAATTGCTA-ATTA-ACCAACAGAATAGAGAATAGATATACAGACA---CCTTGTTAAAATACGAGACTATGAAGA--AATATGA-CAACTGGGCAAACAGAGCGGTACGTAT--CTCGTGTTTATAAA-AC--GTCACGTGGCCTCagagaggaggtactctctgactggtaagtaatcgtagta
gi|6 : AC----AAATCCTGTATTAC-CACAGTCT-TCTGTGTGACAGGTTTGGGGGT---CGGGGTGTGTTGGGCACAGCTTTCTG----TG------------GACGT--------CAGA--TCAGG-CCGTTCTTG--GTT------AT-GTGAT-TTAAA-ACAGTATC---------------CAT-TGGACAGCAGCACCGCCAAACAGGAAGGAACTATATTTATTTTGCCCTTCTAAAGTGTGA-AGAGATTCTACTATAG-AC----------------------CG---TGTTTGTA----AGGAAT-CACATCAAGTGAGACATAATATCTTGGTAAACATGA-TTATTCATAGACAGTGAGATATTATGGATTAGTATGGAACCAAAACTGT-TCTAGATAATAAgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactacaaatcctgtattaccacagtcttctgtgtgacaggtttgggggtcggggtgtgttgggcacagctttctgtggacgtcagatcaggccgttcttggttatgtgatttaaaacagtatccattggacagcagcaccgccaaacaggaaggaactatatttattttgcccttctaaagtgtgaagagattctactatagaccgtgtttgtaaggaatcacatcaagtgagacataatatcttggtaaacatgattattcatagacagtgagatattatggattagtatggaaccaaaactgttctagataataa
gi|7 : tcaacaaaagaagcacagagtgactctctttgaaggatctggttggacactagtggttaagtagaatgatatcatgttaagatacagggtttattaattgctaattaaccaacagaatagagaatagatatacagacaccttgttaaaatacgagactatgaagaaatatgacaactgggcaaacagagcggtacgtatctcgtgtttataaaacgtcacgtggcctcgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactAGGACTACACAC--AGTGA-ACA----GTTCTGGTGATC-TGATTTAT--ATAGACAA-GAAAGGCAACA--TTA---------GCAAACTGTCTAGAGACAAGAAAACAGTTACCACACTTTCAGAGAGAC---TATCAACAGTTAG----ACC-A-CTGT-GTGTGTAATGCTCCCCGTCCACTGGAGATCTGATGGTCGGGA-TGCATAACGCTGATACGGGTACAGGCAAGCTAACCAGGTACAACAGTACAGGACAA
gi|7 : cGCATAACGC---TGATAC---GGGTACA-GGCAAGCTAAC-CAGGT--ACAACAGTACAGGACAAGATCTAGACCGAAT-CTTGACCAT-----A-G-AAG-ACAACAGG-ACCGGT-CAAATGT-TGTATGCTT-AT-CC-ACACTA-TAT-C-ACA-GAAAATACA-AACGGT-GATATTAT-TGTGTCTGATTCG-----CA-CA-----ATCGTGCTGTAGTGGTGACAGAG-CGC-T-GGGGGAGACA-TCG-ATTCTCGT-ACA-CAG-GAC-C-T--ACATCA-GG-A--------TC--ATC-A-CTA-TTACC-ATGGGGAATTTG-TACAGACGAAC-TGTCgatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|7 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatCCGCGAGG-CCTG-CACTATGA-TGAT-GAA-ACTCACCTTCTCTGGGTCGGATC----TTTCAA-CACCAAAACAGTAT-CT-GTAT-A-TAGA-TATGTacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|8 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatgcataacgctgatacgggtacaggcaagctaaccaggtacaacagtacaggacaagatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaGACA-AG-CGCGG-GGGGGAGACAGTCGCATTTTCCT-ACAGCAG-AAC-CTT--CCTTCA-GG-AATCCCCCCTC--ATCAA-CTATCATCCAACACGGAATCTG-TA-AGACGCGCTTGTCatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|8 : TCCATACAG-TCTGGAACT-TGAATGAC-AAAGAATCACCTTCTCTGGGTCGGATCA--AT----C-CACAAAAACAGTGTGGT-GTATCA-TAGA-TAaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacatatccatacagtctggaacttgaatgacaaagaatcaccttctctgggtcggatcaatccacaaaaacagtgtggtgtatcatagatagtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|9 : gacaagcgcgggggggagacagtcgcattttcctacagcagaaccttccttcaggaatcccccctcatcaactatcatccaacacggaatctgtaagacgcgcttgtcaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacataGACAGAGGCGC-G-GGGGGAGACA-TCG-ATTTTCCT-ACA-CAG-AA--C-T--CCTTCAGGG-A--------TCCTATC-ACCTA-TCACC-ACACGGAATCTGTTACAGACGCGC--GTCgtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|9 : CCATACAGGTCT--AACTATGA-TGACAAAA-ATTCACCTTC-CT-GGTCGGATCA--------G-CACCAAAACAGTG--GT-GTAT-A-TAGA-TATGTTacacatcctggtgtgggatattagcaccagcaccagtacaggattgattgacaagggacggtccactctgttctcttttaactgacaccacaaaaatgggatatacataccatacaggtctaactatgatgacaaaaattcaccttcctggtcggatcagcaccaaaacagtggtgtatatagatatgttacaggaggtactcctctgacttggaagtactagtagtactgttagtctac
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): AATATTTAAGATATTGATATATTCTATAGTAATTGTGATTTTCCAAGCAATTATAATGTCTATTTTTAGCACAATGAGTTACTAAAGAGCCAGATCTTCACATAATGATCAGAGCACGACACAGTACAAAGTATAAAGTACGACATTGCTCTCAATGCCAGGGGAACACCGAGTACTACTGTCACACGTGTAAACATGATCTGTGTTTACAGTGTAAAAATAAACATGATGCAGAAAAAAACACCAAATATCACCACGTAGTTATCTA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111 111111111111111111111111111
lowQualScore : 111 11 222222 33333333333 1111 111 11 111 11 2222222222222222222222222222222222222222222222222222222222 6666666666 22 33333 2222 1 1 44444444 1 555555555555 22 11 555555555555555555 33333333 111 77777777777777777777777777777777777777777777777777777777777 11 22222 2222222 22222222 33333333 000000000000000000000000000 1 1111 11 1111 11 11 33333333333 1111 11 33333333333 1 1 3333333333333333 11 4444444444444 1 11111 11111 1111 111 11111111 1111 1111111111111111 55555555555555555555555555555555555555555555555555 4444444444
lowQualScore : 0 3 00 2 444 11 333333 8 8 88888888888 9999 444 0 5 11 8 444 66 6 1 0 8 0 8 0 1 5 11 0 1 2222222222222222222222222222222222222222222222222222222222 0 0000000000 7 6 00 0 11111 4444 2 3 00000000 3 0 8 1 111111111111 0 6 33 33 1 555555555555555555 66666666 777 66666666666666666666666666666666666666666666666666666666666 11 00000 8 1 6666666 99999999 8 66666666 22 000000000000000000000000000 5 9999 1 0 11 8 7777 0 8 0 11 8 11 11 44444444444 1 0 3333 0 0 33 55555555555 8 0 0 8 0 0 1 1 4 0 3 6 3 4444444444444444 8 8 11 1111111111111 0 66666 777 6 6 6 00000 5 6 6 6 6 6 6 6 6 0 6 6 1111 6 5 5 000 5 5 5 5 5 77 5 66 3 5 5 88888888 66 5 5 0000 6 44 6 6 6666666666666666 00000000000000000000000000000000000000000000000000 0 5 5 5 5 5 3333333333 5 4 4 4 4 4
lowQualScore : . . .. . ... .. ...... . . ........... .... ... . . .. . ... .. . . . . . . . . . .. . . .......................................................... . .......... . . .. . ..... .... . . ........ . . . . ............ . . .. .. . .................. ........ ... ........................................................... .. ..... . . ....... ........ . ........ .. ........................... . .... . . .. . .... . . . .. . .. .. ........... . . .... . . .. ........... . . . . . . . . . . . . . ................ . . .. ............. . ..... ... . . . ..... . . . . . . . . . . . . .... . . . ... . . . . . .. . .. . . . ........ .. . . .... . .. . . ................ .................................................. . . . . . . .......... . . . . . .
lowQualScore : 2 2 55 5 000 00 000000 0 0 00000000000 0000 000 8 0 00 0 000 00 4 4 8 0 6 0 8 0 0 00 2 0 7777777777777777777777777777777777777777777777777777777777 7 7777777777 3 7 00 7 00000 0000 0 3 88888888 2 0 8 2 555555555555 2 5 88 88 2 888888888888888888 22222222 000 55555555555555555555555555555555555555555555555555555555555 00 00000 0 4 0000000 00000000 8 22222222 88 555555555555555555555555555 5 5555 0 8 00 0 0000 6 0 8 00 0 66 00 00000000000 0 2 2222 2 2 88 00000000000 8 0 2 8 0 2 0 0 2 8 2 5 2 8888888888888888 0 0 00 0000000000000 0 77777 555 7 7 7 22222 7 7 7 7 7 7 7 7 7 7 7 7 8888 7 2 0 111 0 0 0 0 0 55 0 99 6 0 0 11111111 99 0 0 5555 7 77 7 7 0000000000000000 00000000000000000000000000000000000000000000000000 4 7 7 7 7 7 4444444444 5 0 0 0 0 0
consensus : TCGTGTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTACA-ATTCCTCTTGTTTATAAAGACCAGT--CGTGTCCCCCAGATAAAGGACANCCCTAATC-----NTNCACGCCTT--G-TGTC-NC---GC-AGA-AA---A----GGACGGT-GT-AGTCAGTTATCGAG-G---ATCACAGAAATCAAAACGTCAAG-CGGGAAANC---TAGACGAGT--GTGTGAAACTGACGTT-CAC----AAA-CCTGTATTACACAC-GTCTGTCTGTGTGACAGGTAT-----T---AGGGGTGTGTTA--CACA--TATCTG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCGTGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------TACC--------GTGTGACAGA--------TATAGCAT----------------------CG---TGTGTATAG--GAGGANTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-GAAATATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTCACCACACTGTTAGAGAGACCTACATCACCA--TGG--ATACC-A--GCT-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-TGCGTAACNCTGANACGAGGACAGGCAAGATAACCCGGTACAACAGTACAGGACAACAGCGTAACCC--ATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGANC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCATCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGCAG-CCTG-AACTATGA-TGAC-AAA-ACTCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
Reference ( family-1752 ) : TCGTGTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTACA-ATTCCTCTTGTTTATAAAGACCAGT--CGTGTCCCCCAGATAAAGGACANCCCTAATC-----NTNCACGCCTT--G-TGTC-NC---GC-AGA-AA---A----GGACGGT-GT-AGTCAGTTATCGAG-G---ATCACAGAAATCAAAACGTCAAG-CGGGAAANC---TAGACGAGT--GTGTGAAACTGACGTT-CAC----AAA-CCTGTATTACACAC-GTCTGTCTGTGTGACAGGTAT-----T---AGGGGTGTGTTA--CACA--TATCTG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCGTGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------TACC--------GTGTGACAGA--------TATAGCAT----------------------CG---TGTGTATAG--GAGGANTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-GAAATATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTCACCACACTGTTAGAGAGACCTACATCACCA--TGG--ATACC-A--GCT-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-TGCGTAACNCTGANACGAGGACAGGCAAGATAACCCGGTACAACAGTACAGGACAACAGCGTAACCC--ATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGANC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCATCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGCAG-CCTG-AACTATGA-TGAC-AAA-ACTCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
gi|1 : CATGTTCTCCTCGCAGGGATCAAAACTGATATCCAAGC------------AATCTGTGGCCGTCTATCACAGGTGTTGATAAAAG---CCCAGAG--ACT------GAAGGACCTGATTG-ACACT-GTGGT-----------ATTTGATGTTA---AAAGAAGGTACAAACGTTTACTCATTGAGAGAATACAACAACAGAG--GCGAA-TAATGAA---GCATTTTCTAACCCACATACAGAACTATCAAGACAAATATGAACAA-TCAGCAAACAGAGCGGTGCA-ATTTCTCTTGTTTATAAAGACCAGT--AATGTCCCTCGGATAAAGGACACCCCTAATCCTCCTCTACACGCCTT--GCTTTC-ACTGAGTGAGA-AATTCAACATGGAGGAT-GTGAGTCAGTTATTGAG-GGAAATTACAGAAATCAAAA--TCACGACGGGAAAA-----AGACATGTCGGAATAGACCTGA-GTTACACGTCTAAA-CCTGAGTTACACAA-GTCTGTCTGCGTGACAGGTAT-----TATAAATGGTGT-TTAT-CACA--TATCCT---GTGT-----------GACGT--------CAGA---CAGGATC-----TG--GAT-GAGTGATCATAAT-T-----ACA--ACC--------------TCATCTTGACAG--ACAC-----AACAGG-AGTCACTATT-------CACC--------ATCTAACAGA--------TATAACAT----------------------GGAATTG-GTAT-G--GAGGGTTACACAC--AGTGA-ACA----GTGCTGGGGAAC-TAATTTAT--ATCGATAG-CAACGATGCCG--TCA---------CTAAACTATCTGTAGACAACAAAAGAGTCACCATACTGTTAAAGAGA---ATAAAACCA--TGG--TTTCCTA--GGT-GTGTGTACTATTCCCCCTCCAGTGGGGATTTGTTTGTCG-GATTGTGGAACCCAAAAACTAAGAAGGGTAAGGTAACCCGGTTCAACAGTAAAGG-CGACCACGT
gi|1 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggAACCC--A-AAAACTAAG---AAG-GGTAAGGTAAC-CCGGT--TCAACAGTAAAGGCGACCA-------CGT-C-CT-GACCATTCCAAA-C-AACGAAGACGAA-A---GT-CACGCTA-TGTATAGGA-GT-CCTTGG-TA-CAT-C-ACG-GAAAATAGG-AATGGG-GATGTTAT-TGTGTCTGAATATA-TTAAA-GATAAATGTGGTGCTGTAGTGGTGACAGAC-CAC-A-GGGGGAGATA-TCG-ATTTTCCT-ACA--AG-GG----T--CC-TCG-GGAA--------TC--GCC-A-CTA-CGACC-AGTAGGAATCTG-TACGGACGTGC-TGTCcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|1 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattgtggCCACGGAG-CCTG-GGTTATGA-TGAT-AAA-TCTCACCTTCTCTGGGTCGGATCACGGT----G-GAACAAAACAGTGT-AT-GTAT-A-CAAA-TATATaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|11 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattgtggaacccaaaaactaagaagggtaaggtaacccggttcaacagtaaaggcgaccacgtcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagCCAACACAGTGT-GTGGTAT-A-TAGATTATATTagagaggag
gi|12 : AT-----ATC-AGC-ACGACGAC--CCGGT-CAC-ACC-TGTATATGT-ATTCCTAGA-TAGTAT-CCACATGAGAATAGGGAATGGT-GATATTATGTGTGTCTAACTTGAATTACAATATAACCATGGTGCTGTAGTGGTGACAGAG-C-C-GCGGGGGAGACA-TCG-ATTCTCCTAACA-CAGCGACTC-T--CGATCA-GG-A--------TC--ATC-A-CTA-Ccagaggagtactctctgaaatcggtaagtactagtagtactgtagtttattgtactagtagtatcagttaagtacaataacataaaacaaaaataggaagccattataaattatttggatgaacatgtatattgtttaggaggtgtggagtctgagataattaagtttacagatagagcttagttatagattacagtat
gi|13 : aAT-----A-CCAGC-ACGACGACCACCGGTTCACAAACCTGTATATGT-AT-CCTAGA-TA-TATTC-ACA-GAGAATAGG-A-TGGTTGATATT-T-TGTGT-TAACTCGA-TTACA-TATAAC-ATGGTGCTGTA-TGGTGACAGAG--GCTG-GGGGGAGACA-TCG-ATTCTCCT-ACA-CCG-GAC-C-TTGCCATCA-GG-A--------T---ATC-A-CTA-
gi|14 : aCCATACAG-TCTG-AACTATGA-TGAC-AAA-AATCACCTTCTCTGGGTCGGATCA---T----C-CACAAAAACAGTGT-GT-GTAT-A-TAGA-TATGT
gi|15 : ggatatacataCCAACACCGTGT-GT-GTAT-ATTAGA-TAacagaggaggtactctctgactggtaagtactagtagtactgt
gi|16 : CAACACAGTGT-GT-GTAT-A-TAGA-TATATatacaggggttactctctgattggtaatactagtgtctgatagtttat
gi|2 : TTGTGTTCTCTTGGCAGGAATCCAAACGGGTATCCAAACTTGTCCTCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACG---CCTCACCCACCTACAGAACTATGAGGATATATATGAACAA-TCAGCCAACAGAGTGCTACA-ATTCCTCATTTTTATTAAGACCAGT--CGTGTTCCCCAGATAAAGGACANNNNNNNNN-----NNNNNNNNNTTC-G-TGTC-CC---CC-AGATAA---A----GGACAGTTGT-AGTCAGTTATTGAGTGCC-ATCACAGAAATCCAAACGTCAA--CAGGAAACCAATTAGACGAGT--GTGTGAAACTGATGTT-CAC----A---CCTGTATTACACGC-GGCTTTCCGTGTGACAGATGT-----T---AGGGATGTGTTA--CACA--TATCTG---ATGT-----------GACGT--------CAGACNTCAGG-TC-----TG--GGT------ATC-TGAT-T--GGTACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------CACC--------GTGTGGCAGA--------TATAGCAT----------------------CA---TG-GTATAGAGGAGGACTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-TAAATATAACA--TCA---------ACAAACTGTCTATAAACAGTAAAACAGTCACCACACTGTTAGAGTGGCCTACATCATCA--TGG--AGACC-A--GCTTGTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-CGCGTAACTCTGATACAAGGACAGGCACGATAACCCGGTACAACAGTACAGGACAACAGNGTAACCCTCATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA--------GG-TACA-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACAACC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AATGGT-GATATTAT-TGTGTCTAACTTGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCACCA-GG-A--------TC--ATC-T-CTA-CATCC-ACTAGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGTAG-CCTG-AACTATGA-TGAT-AAA-TCTCACCTACTCTGGGTCGGATCA-GAT----GACACCAACACAGTGC-GT-GTAT-A-TAGA-TATANTacagaggaggtactctctgattggtaagtactagtagta
gi|3 : TCGTATTCTCCTGGCAGAAATCCAAACTGATATCCAAACTTGTCCCTCACAAATCGGTCACCGTCAGTCACCGATGTCAACAAAGG---CCCAGAG--ACT------AAAGGACCTGATTG-ACATC-ATGGT-----------ATGTGATGTTA---CAAGA---TACAGAGATGCATTGATTCATAGAATGCAACAACAGAA--GAGAA-AATTAAACAGACA---ACTTTTTCACATACAGAACTATGAACATAGATATGAACAA-TCAACAAACAGAGTGGTGCA-GTTCCTCTTGTTTATAAAGTTCAGT--CGTATTCCCCATATAAAAAACAGTCCTAGTC-----AGTTA----TTGAG-TGTCATC---AC-AGA-------------AC--T------CCAAATATCA----------ACAGG----AAAACGACAAG-TAGGAATGC---TCGAAGA-----TGTGAAACTGACGTC-CAC------A-CCTGTATCACATAC-GTCTGTCTGTGTGAGAGGTAT--------------TGTATTA--CACA--CGTCTGTCCGTGTAAGAGGTATTAGACGTGTGATTCACATA--TCTGG-TG-----TGACGTCAGA---ACCGCGATAT--GG-ATA--ATCTGATGTAAAGAAATTCATCCTGATAG--ACAT-----AACAGG-AAACATAATA-------TACC--------GTGg
gi|4 : cacacagtataaagtacgacattgctctcaatgtcagggggacaccgagtactactgttacacgtgtaaacatggtctgtgtttacagtgtaaagagagacatgtcattgatgtagataccaaacaccatggtgtcgtaatttaccgtgagaaattcaaatgcgtcccttcccgagagacctgtgtcaaacatccacacatcaaatacctgtactgtgatcagtgtaagtattccatgtgctatcgttgcacagatcatcgaacttacaagctgatagatcttagaacagcctatcaaactaagcgacatcaacacagaacattcattgccaatatcagaagtgagactctctataactgTCGTCTTCTCTTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCAAAAATATCTCACTGTCAATCACAGATGTCAACAAACG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-ATGGT-----------ATGTGATACCAAAACAAGA---TACAGAGATTTATTGATTGCTAGAATAAAACATCAGAA--GAGAA-AAATGAACAGTCA---CCTCACCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCCAACAGAGCGATACA-ATTCCTCTT-TTTATAAAGACCAGT--CGTATCCCGCAAATAAAGGACAACCCTAATC-----TTCCAC
gi|5 : gtaattaatgatatgtatatgttgataacattattatgatgtgctatataattatactgtctgtttattttcagcagattgtatccctaaagacccagacctccacatcatggacacactaggactcagtacacagtataaagtacgacattgttctcaatgtcaggaggacaccgagttctactgtcacacgtgtaaaaatgatctttgtttactgtgtaaagaaagacatgtcattcatctaaacaccatacaacatgatgttgtaatttatcgtgagaggtttggctacatcccgagacatgagatctgcgtccggcatccagacaggatctatgaaatgttctgtcagtcctgtgaactttctgtctgtttccaatgtctagagcaccgaaaacaccaaatattggacattagaacagcctatcaaacaaagcgacaacaacaccgaaaaatcattgacaacatcagaagtgagagtctctataactgATCTTGACAG--ACAC-----AACAGG-AGACACTATG-------TACC--------GTGTGAGAGA--------TGTGTCATTATTGATTGGAGGACCTGGGTACA---TGTGTAGAG--GAGGGATACACAC--AATGA-ACA----ATTCTGGGGAAC-TGATTTAT--ATAGACAG-GGATTATAACA--TCA---------AAAAACTGTCTATAGACAAAGAAACAGTAATCACACTGTTAGAGAGTCCTACATCACCA--TGGATATATC----GCT-GTGTAAACTGCTCCCCATCCACTGGAGATCTGATGGTCGCAA-TGTTTAACACTAAGATAAAGACAAGCAAGATAACCCGATACAACAGTACAGGACAACA-CG--ATCT------GAC---G---ATACAGCAGGACAACACCGGTAAAGAACTGTATAGaacacctgctgcttt
gi|5 : --ATAAA-----G---ACA-AGCAAGATAAC-CCGAT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACGAT-----A-C-AGC-AGGACAAC-ACCGGT-AAAGAAC-TGTATA-GTAAT-CCTATA-TA-TAT-C-ACA-GTGAATAAG-AACGGT-GATATTAT-TGTGTCTGAC-----------TATAACCATGGTGCTTTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-AAG-GAC-C-T--CCATCA-GG-A--------TC--ATT-A-CTA-GATCC-ACGTGGAATATG-TACAGATGCGC-TGTCtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|5 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagCCACTCAG-CCTG-AACTATGA-TGAT-AAA-ACTCACCTTCTCTGGGTTGGAGCATGGT----G-CAACAA---AGTAT-CA-ATAT-A-TAGA-TATATacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|6 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagataaagacaagcaagataacccgatacaacagtacaggacaacacgatctgacgatacagcaggacaacaccggtaaagaactgtatagtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaTCAACAAAAGAAGCACAGAGTGACTCTCTTTGAAGGATCTGGTTGGACACTAGTGGTTAAGTAGAATGATATCATGTTA-----AGA---TACAG-GGTTTATTAATTGCTA-ATTA-ACCAACAGAATAGAGAATAGATATACAGACA---CCTTGTTAAAATACGAGACTATGAAGA--AATATGA-CAACTGGGCAAACAGAGCGGTACGTAT--CTCGTGTTTATAAA-AC--GTCACGTGGCCTCagagaggaggtactctctgactggtaagtaatcgtagta
gi|6 : AC----AAATCCTGTATTAC-CACAGTCT-TCTGTGTGACAGGTTTGGGGGT---CGGGGTGTGTTGGGCACAGCTTTCTG----TG------------GACGT--------CAGA--TCAGG-CCGTTCTTG--GTT------AT-GTGAT-TTAAA-ACAGTATC---------------CAT-TGGACAGCAGCACCGCCAAACAGGAAGGAACTATATTTATTTTGCCCTTCTAAAGTGTGA-AGAGATTCTACTATAG-AC----------------------CG---TGTTTGTA----AGGAAT-CACATCAAGTGAGACATAATATCTTGGTAAACATGA-TTATTCATAGACAGTGAGATATTATGGATTAGTATGGAACCAAAACTGT-TCTAGATAATAAgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactacaaatcctgtattaccacagtcttctgtgtgacaggtttgggggtcggggtgtgttgggcacagctttctgtggacgtcagatcaggccgttcttggttatgtgatttaaaacagtatccattggacagcagcaccgccaaacaggaaggaactatatttattttgcccttctaaagtgtgaagagattctactatagaccgtgtttgtaaggaatcacatcaagtgagacataatatcttggtaaacatgattattcatagacagtgagatattatggattagtatggaaccaaaactgttctagataataa
gi|7 : tcaacaaaagaagcacagagtgactctctttgaaggatctggttggacactagtggttaagtagaatgatatcatgttaagatacagggtttattaattgctaattaaccaacagaatagagaatagatatacagacaccttgttaaaatacgagactatgaagaaatatgacaactgggcaaacagagcggtacgtatctcgtgtttataaaacgtcacgtggcctcgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactAGGACTACACAC--AGTGA-ACA----GTTCTGGTGATC-TGATTTAT--ATAGACAA-GAAAGGCAACA--TTA---------GCAAACTGTCTAGAGACAAGAAAACAGTTACCACACTTTCAGAGAGACT---ATCAACAGTTAG--A--CC-ACTG-T-GTGTGTAATGCTCCCCGTCCACTGGAGATCTGATGGTCGGGA-TGCATAACGCTGATACGGGTACAGGCAAGCTAACCAGGTACAACAGTACAGGACAA
gi|7 : cGCATAACGC---TGATAC---GGGTACA-GGCAAGCTAAC-CAGGT--ACAACAGTACAGGACAAGATCTAGACCGAAT-CTTGACCAT-----A-G-AAG-ACAACAGG-ACCGGT-CAAATGT-TGTATGCTT-AT-CC-ACACTA-TAT-C-ACA-GAAAATACA-AACGGT-GATATTAT-TGTGTCTGATTCG-----CA-CA-----ATCGTGCTGTAGTGGTGACAGAG-CGC-T-GGGGGAGACA-TCG-ATTCTCGT-ACA-CAG-GAC-C-T--ACATCA-GG-A--------TC--ATC-A-CTA-TTACC-ATGGGGAATTTG-TACAGACGAAC-TGTCgatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|7 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatCCGCGAGG-CCTG-CACTATGA-TGAT-GAA-ACTCACCTTCTCTGGGTCGGATC----TTTCAA-CACCAAAACAGTAT-CT-GTAT-A-TAGA-TATGTacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|8 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatgcataacgctgatacgggtacaggcaagctaaccaggtacaacagtacaggacaagatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaGACA-AG-CGCGG-GGGGGAGACAGTCGCATTTTCCT-ACAGCAG-AAC-CTT--CCTTCA-GG-AATCCCCCCTC--ATCAA-CTATCATCCAACACGGAATCTG-TA-AGACGCGCTTGTCatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|8 : TCCATACAG-TCTGGAACT-TGAATGAC-AAAGAATCACCTTCTCTGGGTCGGATCA--AT----C-CACAAAAACAGTGTGGT-GTATCA-TAGA-TAaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacatatccatacagtctggaacttgaatgacaaagaatcaccttctctgggtcggatcaatccacaaaaacagtgtggtgtatcatagatagtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|9 : gacaagcgcgggggggagacagtcgcattttcctacagcagaaccttccttcaggaatcccccctcatcaactatcatccaacacggaatctgtaagacgcgcttgtcaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacataGACAGAGGCGC-G-GGGGGAGACA-TCG-ATTTTCCT-ACA-CAG-AA--C-T--CCTTCAGGG-A--------TCCTATC-ACCTA-TCACC-ACACGGAATCTGTTACAGACGCGC--GTCgtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|9 : CCATACAGGTCT--AACTATGA-TGACAAAA-ATTCACCTTC-CT-GGTCGGATCA--------G-CACCAAAACAGTG--GT-GTAT-A-TAGA-TATGTTacacatcctggtgtgggatattagcaccagcaccagtacaggattgattgacaagggacggtccactctgttctcttttaactgacaccacaaaaatgggatatacataccatacaggtctaactatgatgacaaaaattcaccttcctggtcggatcagcaccaaaacagtggtgtatatagatatgttacaggaggtactcctctgacttggaagtactagtagtactgttagtctac
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): AATATTTAAGATATTGATATATTCTATAGTAATTGTGATTTTCCAAGCAATTATAATGTCTATTTTTAGCACAATGAGTTACTAAAGAGCCAGATCTTCACATAATGATCAGAGCACGACACAGTACAAAGTATAAAGTACGACATTGCTCTCAATGCCAGGGGAACACCGAGTACTACTGTCACACGTGTAAACATGATCTGTGTTTACAGTGTAAAAATAAACATGATGCAGAAAAAAACACCAAATATCACCACGTAGTTATCTA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111 111111111111111111111111111
lowQualScore : 111 11 222222 33333333333 1111 111 11 111 11 2222222222222222222222222222222222222222222222222222222222 6666666666 22 33333 2222 1 1 44444444 1 555555555555 22 11 555555555555555555 33333333 111 77777777777777777777777777777777777777777777777777777777777 11 22222 2222222 22222222 33333333 000000000000000000000000000 1 1111 11 1111 11 11 33333333333 1111 11 33333333333 1 1 3333333333333333 11 4444444444444 1 11111 11111 1111 111 11111111 1111 1111111111111111 55555555555555555555555555555555555555555555555555 4444444444
lowQualScore : 0 3 00 2 444 11 333333 8 8 88888888888 9999 444 0 5 11 8 444 66 6 1 0 8 0 8 0 1 5 11 0 1 2222222222222222222222222222222222222222222222222222222222 0 0000000000 7 6 00 0 11111 4444 2 3 00000000 3 0 8 1 111111111111 0 6 33 33 1 555555555555555555 66666666 777 66666666666666666666666666666666666666666666666666666666666 11 00000 8 1 6666666 99999999 8 66666666 22 000000000000000000000000000 5 9999 1 0 11 8 7777 0 8 0 11 8 11 11 44444444444 1 0 3333 0 0 33 55555555555 8 0 0 8 0 0 1 1 4 0 3 6 3 4444444444444444 8 8 11 1111111111111 0 66666 777 6 6 6 00000 5 6 6 6 6 6 6 6 6 0 6 6 1111 6 5 5 000 5 5 5 5 5 77 5 66 3 5 5 88888888 66 5 5 0000 6 44 6 6 6666666666666666 00000000000000000000000000000000000000000000000000 0 5 5 5 5 5 3333333333 5 4 4 4 4 4
lowQualScore : . . .. . ... .. ...... . . ........... .... ... . . .. . ... .. . . . . . . . . . .. . . .......................................................... . .......... . . .. . ..... .... . . ........ . . . . ............ . . .. .. . .................. ........ ... ........................................................... .. ..... . . ....... ........ . ........ .. ........................... . .... . . .. . .... . . . .. . .. .. ........... . . .... . . .. ........... . . . . . . . . . . . . . ................ . . .. ............. . ..... ... . . . ..... . . . . . . . . . . . . .... . . . ... . . . . . .. . .. . . . ........ .. . . .... . .. . . ................ .................................................. . . . . . . .......... . . . . . .
lowQualScore : 2 2 55 5 000 00 000000 0 0 00000000000 0000 000 8 0 00 0 000 00 4 4 8 0 6 0 8 0 0 00 2 0 7777777777777777777777777777777777777777777777777777777777 7 7777777777 3 7 00 7 00000 0000 0 3 88888888 2 0 8 2 555555555555 2 5 88 88 2 888888888888888888 22222222 000 55555555555555555555555555555555555555555555555555555555555 00 00000 0 4 0000000 00000000 8 22222222 88 555555555555555555555555555 5 5555 0 8 00 0 0000 6 0 8 00 0 66 00 00000000000 0 2 2222 2 2 88 00000000000 8 0 2 8 0 2 0 0 2 8 2 5 2 8888888888888888 0 0 00 0000000000000 0 77777 555 7 7 7 22222 7 7 7 7 7 7 7 7 7 7 7 7 8888 7 2 0 111 0 0 0 0 0 55 0 99 6 0 0 11111111 99 0 0 5555 7 77 7 7 0000000000000000 00000000000000000000000000000000000000000000000000 4 7 7 7 7 7 4444444444 5 0 0 0 0 0
consensus : TCGTGTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTACA-ATTCCTCTTGTTTATAAAGACCAGT--CGTGTCCCCCAGATAAAGGACANCCCTAATC-----NTNCACGCCTT--G-TGTC-NC---GC-AGA-AA---A----GGACGGT-GT-AGTCAGTTATCGAG-G---ATCACAGAAATCAAAACGTCAAG-CGGGAAANC---TAGACGAGT--GTGTGAAACTGACGTT-CAC----AAA-CCTGTATTACACAC-GTCTGTCTGTGTGACAGGTAT-----T---AGGGGTGTGTTA--CACA--TATCTG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCGTGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------TACC--------GTGTGACAGA--------TATAGCAT----------------------CG---TGTGTATAG--GAGGANTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-GAAATATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTCACCACACTGTTAGAGAGACCTACATCACCA--TGG--ATACC-A--GCT-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-TGCGTAACNCTGANACGAGGACAGGCAAGATAACCCGGTACAACAGTACAGGACAACAGCGTAACCC--ATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGANC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCATCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGCAG-CCTG-AACTATGA-TGAC-AAA-ACTCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
Reference ( family-1752 ) : TCGTGTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTACA-ATTCCTCTTGTTTATAAAGACCAGT--CGTGTCCCCCAGATAAAGGACANCCCTAATC-----NTNCACGCCTT--G-TGTC-NC---GC-AGA-AA---A----GGACGGT-GT-AGTCAGTTATCGAG-G---ATCACAGAAATCAAAACGTCAAG-CGGGAAANC---TAGACGAGT--GTGTGAAACTGACGTT-CAC----AAA-CCTGTATTACACAC-GTCTGTCTGTGTGACAGGTAT-----T---AGGGGTGTGTTA--CACA--TATCTG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCGTGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------TACC--------GTGTGACAGA--------TATAGCAT----------------------CG---TGTGTATAG--GAGGANTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-GAAATATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTCACCACACTGTTAGAGAGACCTACATCACCA--TGG--ATACC-A--GCT-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-TGCGTAACNCTGANACGAGGACAGGCAAGATAACCCGGTACAACAGTACAGGACAACAGCGTAACCC--ATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGANC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCATCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGCAG-CCTG-AACTATGA-TGAC-AAA-ACTCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
gi|1 : CATGTTCTCCTCGCAGGGATCAAAACTGATATCCAAGC------------AATCTGTGGCCGTCTATCACAGGTGTTGATAAAAG---CCCAGAG--ACT------GAAGGACCTGATTG-ACACT-GTGGT-----------ATTTGATGTTA---AAAGAAGGTACAAACGTTTACTCATTGAGAGAATACAACAACAGAG--GCGAA-TAATGAA---GCATTTTCTAACCCACATACAGAACTATCAAGACAAATATGAACAA-TCAGCAAACAGAGCGGTGCA-ATTTCTCTTGTTTATAAAGACCAGT--AATGTCCCTCGGATAAAGGACACCCCTAATCCTCCTCTACACGCCTT--GCTTTC-ACTGAGTGAGA-AATTCAACATGGAGGAT-GTGAGTCAGTTATTGAG-GGAAATTACAGAAATCAAAA--TCACGACGGGAAAA-----AGACATGTCGGAATAGACCTGA-GTTACACGTCTAAA-CCTGAGTTACACAA-GTCTGTCTGCGTGACAGGTAT-----TATAAATGGTGT-TTAT-CACA--TATCCT---GTGT-----------GACGT--------CAGA---CAGGATC-----TG--GAT-GAGTGATCATAAT-T-----ACA--ACC--------------TCATCTTGACAG--ACAC-----AACAGG-AGTCACTATT-------CACC--------ATCTAACAGA--------TATAACAT----------------------GGAATTG-GTAT-G--GAGGGTTACACAC--AGTGA-ACA----GTGCTGGGGAAC-TAATTTAT--ATCGATAG-CAACGATGCCG--TCA---------CTAAACTATCTGTAGACAACAAAAGAGTCACCATACTGTTAAAGAGA---ATAAAACCA--TGG--TTTCCTA--GGT-GTGTGTACTATTCCCCCTCCAGTGGGGATTTGTTTGTCG-GATTGTGGAACCCAAAAACTAAGAAGGGTAAGGTAACCCGGTTCAACAGTAAAGG-CGACCACGT
gi|1 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggAACCC--A-AAAACTAAG---AAG-GGTAAGGTAAC-CCGGT--TCAACAGTAAAGGCGACCA-------CGT-C-CT-GACCATTCCAAA-C-AACGAAGACGAA-A---GT-CACGCTA-TGTATAGGA-GT-CCTTGG-TA-CAT-C-ACG-GAAAATAGG-AATGGG-GATGTTAT-TGTGTCTGAATATA-TTAAA-GATAAATGTGGTGCTGTAGTGGTGACAGAC-CAC-A-GGGGGAGATA-TCG-ATTTTCCT-ACA--AG-GG----T--CC-TCG-GGAA--------TC--GCC-A-CTA-CGACC-AGTAGGAATCTG-TACGGACGTGC-TGTCcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|1 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattgtggCCACGGAG-CCTG-GGTTATGA-TGAT-AAA-TCTCACCTTCTCTGGGTCGGATCACGGT----G-GAACAAAACAGTGT-AT-GTAT-A-CAAA-TATATaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|11 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattgtggaacccaaaaactaagaagggtaaggtaacccggttcaacagtaaaggcgaccacgtcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagCCAACACAGTGT-GTGGTAT-A-TAGATTATATTagagaggag
gi|12 : AT-----ATC-AGC-ACGACGAC--CCGGT-CAC-ACC-TGTATATGT-ATTCCTAGA-TAGTAT-CCACATGAGAATAGGGAATGGT-GATATTATGTGTGTCTAACTTGAATTACAATATAACCATGGTGCTGTAGTGGTGACAGAG-C-C-GCGGGGGAGACA-TCG-ATTCTCCTAACA-CAGCGACTC-T--CGATCA-GG-A--------TC--ATC-A-CTA-Ccagaggagtactctctgaaatcggtaagtactagtagtactgtagtttattgtactagtagtatcagttaagtacaataacataaaacaaaaataggaagccattataaattatttggatgaacatgtatattgtttaggaggtgtggagtctgagataattaagtttacagatagagcttagttatagattacagtat
gi|13 : aAT-----A-CCAGC-ACGACGACCACCGGTTCACAAACCTGTATATGT-AT-CCTAGA-TA-TATTC-ACA-GAGAATAGG-A-TGGTTGATATT-T-TGTGT-TAACTCGA-TTACA-TATAAC-ATGGTGCTGTA-TGGTGACAGAG--GCTG-GGGGGAGACA-TCG-ATTCTCCT-ACA-CCG-GAC-C-TTGCCATCA-GG-A--------T---ATC-A-CTA-
gi|14 : aCCATACAG-TCTG-AACTATGA-TGAC-AAA-AATCACCTTCTCTGGGTCGGATCA---T----C-CACAAAAACAGTGT-GT-GTAT-A-TAGA-TATGT
gi|15 : ggatatacataCCAACACCGTGT-GT-GTAT-ATTAGA-TAacagaggaggtactctctgactggtaagtactagtagtactgt
gi|16 : CAACACAGTGT-GT-GTAT-A-TAGA-TATATatacaggggttactctctgattggtaatactagtgtctgatagtttat
gi|2 : TTGTGTTCTCTTGGCAGGAATCCAAACGGGTATCCAAACTTGTCCTCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACG---CCTCACCCACCTACAGAACTATGAGGATATATATGAACAA-TCAGCCAACAGAGTGCTACA-ATTCCTCATTTTTATTAAGACCAGT--CGTGTTCCCCAGATAAAGGACANNNNNNNNN-----NNNNNNNNNTTC-G-TGTC-CC---CC-AGATAA---A----GGACAGTTGT-AGTCAGTTATTGAGTGCC-ATCACAGAAATCCAAACGTCAA--CAGGAAACCAATTAGACGAGT--GTGTGAAACTGATGTT-CAC----A---CCTGTATTACACGC-GGCTTTCCGTGTGACAGATGT-----T---AGGGATGTGTTA--CACA--TATCTG---ATGT-----------GACGT--------CAGACNTCAGG-TC-----TG--GGT------ATC-TGAT-T--GGTACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------CACC--------GTGTGGCAGA--------TATAGCAT----------------------CA---TG-GTATAGAGGAGGACTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-TAAATATAACA--TCA---------ACAAACTGTCTATAAACAGTAAAACAGTCACCACACTGTTAGAGTGGCCTACATCATCA--TGG--AGACC-A--GCTTGTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-CGCGTAACTCTGATACAAGGACAGGCACGATAACCCGGTACAACAGTACAGGACAACAGNGTAACCCTCATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA--------GG-TACA-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACAACC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AATGGT-GATATTAT-TGTGTCTAACTTGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCACCA-GG-A--------TC--ATC-T-CTA-CATCC-ACTAGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGTAG-CCTG-AACTATGA-TGAT-AAA-TCTCACCTACTCTGGGTCGGATCA-GAT----GACACCAACACAGTGC-GT-GTAT-A-TAGA-TATANTacagaggaggtactctctgattggtaagtactagtagta
gi|3 : TCGTATTCTCCTGGCAGAAATCCAAACTGATATCCAAACTTGTCCCTCACAAATCGGTCACCGTCAGTCACCGATGTCAACAAAGG---CCCAGAG--ACT------AAAGGACCTGATTG-ACATC-ATGGT-----------ATGTGATGTTA---CAAGA---TACAGAGATGCATTGATTCATAGAATGCAACAACAGAA--GAGAA-AATTAAACAGACA---ACTTTTTCACATACAGAACTATGAACATAGATATGAACAA-TCAACAAACAGAGTGGTGCA-GTTCCTCTTGTTTATAAAGTTCAGT--CGTATTCCCCATATAAAAAACAGTCCTAGTC-----AGTTA----TTGAG-TGTCATC---AC-AGA-------------AC--T------CCAAATATCA----------ACAGG----AAAACGACAAG-TAGGAATGC---TCGAAGA-----TGTGAAACTGACGTC-CAC------A-CCTGTATCACATAC-GTCTGTCTGTGTGAGAGGTAT--------------TGTATTA--CACA--CGTCTGTCCGTGTAAGAGGTATTAGACGTGTGATTCACATA--TCTGG-TG-----TGACGTCAGA---ACCGCGATAT--GG-ATA--ATCTGATGTAAAGAAATTCATCCTGATAG--ACAT-----AACAGG-AAACATAATA-------TACC--------GTGg
gi|4 : cacacagtataaagtacgacattgctctcaatgtcagggggacaccgagtactactgttacacgtgtaaacatggtctgtgtttacagtgtaaagagagacatgtcattgatgtagataccaaacaccatggtgtcgtaatttaccgtgagaaattcaaatgcgtcccttcccgagagacctgtgtcaaacatccacacatcaaatacctgtactgtgatcagtgtaagtattccatgtgctatcgttgcacagatcatcgaacttacaagctgatagatcttagaacagcctatcaaactaagcgacatcaacacagaacattcattgccaatatcagaagtgagactctctataactgTCGTCTTCTCTTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCAAAAATATCTCACTGTCAATCACAGATGTCAACAAACG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-ATGGT-----------ATGTGATACCAAAACAAGA---TACAGAGATTTATTGATTGCTAGAATAAAACATCAGAA--GAGAA-AAATGAACAGTCA---CCTCACCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCCAACAGAGCGATACA-ATTCCTCTT-TTTATAAAGACCAGT--CGTATCCCGCAAATAAAGGACAACCCTAATC-----TTCCAC
gi|5 : gtaattaatgatatgtatatgttgataacattattatgatgtgctatataattatactgtctgtttattttcagcagattgtatccctaaagacccagacctccacatcatggacacactaggactcagtacacagtataaagtacgacattgttctcaatgtcaggaggacaccgagttctactgtcacacgtgtaaaaatgatctttgtttactgtgtaaagaaagacatgtcattcatctaaacaccatacaacatgatgttgtaatttatcgtgagaggtttggctacatcccgagacatgagatctgcgtccggcatccagacaggatctatgaaatgttctgtcagtcctgtgaactttctgtctgtttccaatgtctagagcaccgaaaacaccaaatattggacattagaacagcctatcaaacaaagcgacaacaacaccgaaaaatcattgacaacatcagaagtgagagtctctataactgATCTTGACAG--ACAC-----AACAGG-AGACACTATG-------TACC--------GTGTGAGAGA--------TGTGTCATTATTGATTGGAGGACCTGGGTACA---TGTGTAGAG--GAGGGATACACAC--AATGA-ACA----ATTCTGGGGAAC-TGATTTAT--ATAGACAG-GGATTATAACA--TCA---------AAAAACTGTCTATAGACAAAGAAACAGTAATCACACTGTTAGAGAGTCCTACATCACCA--TGGATATATC----GCT-GTGTAAACTGCTCCCCATCCACTGGAGATCTGATGGTCGCAA-TGTTTAACACTAAGATAAAGACAAGCAAGATAACCCGATACAACAGTACAGGACAACA-CG--ATCT------GAC---G---ATACAGCAGGACAACACCGGTAAAGAACTGTATAGaacacctgctgcttt
gi|5 : --ATAAA-----G---ACA-AGCAAGATAAC-CCGAT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACGAT-----A-C-AGC-AGGACAAC-ACCGGT-AAAGAAC-TGTATA-GTAAT-CCTATA-TA-TAT-C-ACA-GTGAATAAG-AACGGT-GATATTAT-TGTGTCTGAC-----------TATAACCATGGTGCTTTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-AAG-GAC-C-T--CCATCA-GG-A--------TC--ATT-A-CTA-GATCC-ACGTGGAATATG-TACAGATGCGC-TGTCtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|5 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagCCACTCAG-CCTG-AACTATGA-TGAT-AAA-ACTCACCTTCTCTGGGTTGGAGCATGGT----G-CAACAA---AGTAT-CA-ATAT-A-TAGA-TATATacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|6 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagataaagacaagcaagataacccgatacaacagtacaggacaacacgatctgacgatacagcaggacaacaccggtaaagaactgtatagtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaTCAACAAAAGAAGCACAGAGTGACTCTCTTTGAAGGATCTGGTTGGACACTAGTGGTTAAGTAGAATGATATCATGTTA-----AGA---TACAG-GGTTTATTAATTGCTA-ATTA-ACCAACAGAATAGAGAATAGATATACAGACA---CCTTGTTAAAATACGAGACTATGAAGA--AATATGA-CAACTGGGCAAACAGAGCGGTACGTAT--CTCGTGTTTATAAA-AC--GTCACGTGGCCTCagagaggaggtactctctgactggtaagtaatcgtagta
gi|6 : AC----AAATCCTGTATTAC-CACAGTCT-TCTGTGTGACAGGTTTGGGGGT---CGGGGTGTGTTGGGCACAGCTTTCTG----TG------------GACGT--------CAGA--TCAGG-CCGTTCTTG--GTT------AT-GTGAT-TTAAA-ACAGTATC---------------CAT-TGGACAGCAGCACCGCCAAACAGGAAGGAACTATATTTATTTTGCCCTTCTAAAGTGTGA-AGAGATTCTACTATAG-AC----------------------CG---TGTTTGTA----AGGAAT-CACATCAAGTGAGACATAATATCTTGGTAAACATGA-TTATTCATAGACAGTGAGATATTATGGATTAGTATGGAACCAAAACTGT-TCTAGATAATAAgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactacaaatcctgtattaccacagtcttctgtgtgacaggtttgggggtcggggtgtgttgggcacagctttctgtggacgtcagatcaggccgttcttggttatgtgatttaaaacagtatccattggacagcagcaccgccaaacaggaaggaactatatttattttgcccttctaaagtgtgaagagattctactatagaccgtgtttgtaaggaatcacatcaagtgagacataatatcttggtaaacatgattattcatagacagtgagatattatggattagtatggaaccaaaactgttctagataataa
gi|7 : tcaacaaaagaagcacagagtgactctctttgaaggatctggttggacactagtggttaagtagaatgatatcatgttaagatacagggtttattaattgctaattaaccaacagaatagagaatagatatacagacaccttgttaaaatacgagactatgaagaaatatgacaactgggcaaacagagcggtacgtatctcgtgtttataaaacgtcacgtggcctcgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactAGGACTACACAC--AGTGA-ACA----GTTCTGGTGATC-TGATTTAT--ATAGACAA-GAAAGGCAACA--TTA---------GCAAACTGTCTAGAGACAAGAAAACAGTTACCACACTTTCAGAGAGACT---ATCAACAGTTAG--A--CC-ACTG-T-GTGTGTAATGCTCCCCGTCCACTGGAGATCTGATGGTCGGGA-TGCATAACGCTGATACGGGTACAGGCAAGCTAACCAGGTACAACAGTACAGGACAA
gi|7 : cGCATAACGC---TGATAC---GGGTACA-GGCAAGCTAAC-CAGGT--ACAACAGTACAGGACAAGATCTAGACCGAAT-CTTGACCAT-----A-G-AAG-ACAACAGG-ACCGGT-CAAATGT-TGTATGCTT-AT-CC-ACACTA-TAT-C-ACA-GAAAATACA-AACGGT-GATATTAT-TGTGTCTGATTCG-----CA-CA-----ATCGTGCTGTAGTGGTGACAGAG-CGC-T-GGGGGAGACA-TCG-ATTCTCGT-ACA-CAG-GAC-C-T--ACATCA-GG-A--------TC--ATC-A-CTA-TTACC-ATGGGGAATTTG-TACAGACGAAC-TGTCgatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|7 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatCCGCGAGG-CCTG-CACTATGA-TGAT-GAA-ACTCACCTTCTCTGGGTCGGATC----TTTCAA-CACCAAAACAGTAT-CT-GTAT-A-TAGA-TATGTacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|8 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatgcataacgctgatacgggtacaggcaagctaaccaggtacaacagtacaggacaagatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaGACA-AG-CGCGG-GGGGGAGACAGTCGCATTTTCCT-ACAGCAG-AAC-CTT--CCTTCA-GG-AATCCCCCCTC--ATCAA-CTATCATCCAACACGGAATCTG-TA-AGACGCGCTTGTCatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|8 : TCCATACAG-TCTGGAACT-TGAATGAC-AAAGAATCACCTTCTCTGGGTCGGATCA--AT----C-CACAAAAACAGTGTGGT-GTATCA-TAGA-TAaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacatatccatacagtctggaacttgaatgacaaagaatcaccttctctgggtcggatcaatccacaaaaacagtgtggtgtatcatagatagtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|9 : gacaagcgcgggggggagacagtcgcattttcctacagcagaaccttccttcaggaatcccccctcatcaactatcatccaacacggaatctgtaagacgcgcttgtcaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacataGACAGAGGCGC-G-GGGGGAGACA-TCG-ATTTTCCT-ACA-CAG-AA--C-T--CCTTCAGGG-A--------TCCTATC-ACCTA-TCACC-ACACGGAATCTGTTACAGACGCGC--GTCgtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|9 : CCATACAGGTCT--AACTATGA-TGACAAAA-ATTCACCTTC-CT-GGTCGGATCA--------G-CACCAAAACAGTG--GT-GTAT-A-TAGA-TATGTTacacatcctggtgtgggatattagcaccagcaccagtacaggattgattgacaagggacggtccactctgttctcttttaactgacaccacaaaaatgggatatacataccatacaggtctaactatgatgacaaaaattcaccttcctggtcggatcagcaccaaaacagtggtgtatatagatatgttacaggaggtactcctctgacttggaagtactagtagtactgttagtctac
blockSeqs : T C AAG TG CTCTTT G A TAAGTAGAATG AAAC . C TA T . CA T T C T A T CA N NNNNNNNNNTTCGTGTCCCCCAGATAAAGGACAGTTGT AGTGCCATC A C G CCAAT GT T . AAAT A A T G GGGGGTCGG G GG GC A TCCGTGTAAGAGGTATTA GTGATTCA CNT TGTGACGTCAGAACCGCGATATGGATAATCTGATGTAAAGAAATT CA CGCCA A G TTTATTT CTTCTAAA C GATTCTAC GC TATTGATTGGAGGACCTGGGTACA T AGAG C CA G TAAT A TC T AT GA GTATGGAACCA T GCCT GT ATATATC C T C . T T A A G T TCATAAAACG C A AA TCTAGACCGAAT T . TC . C T AAACC T A T C G T C T G T G TGAA A C G GC G C A G C CT T TG A G . ATCCCCCC CT A C TCAT A TA T T G G A A G TTTCAA C G G C T T
blockSeqs : T C . . . . . . C . C . . . TT T G . . T G . G AGTTATTGAGTGTCATCACAGAACT . . C . GC . C . A A . G A TAGG A . . G ATGT . T CCGTTCTTGGTTATGTGATTTAAAACAGTATC . . . A . . G . TC CA T AG A . . . . . . TT . AC A TCCT . AGACCA C . C . A G A A G T TGATACGGGT . . . GGTA . . CC . . . AACC T . . . . . . . . . . CGA . C . TG . . . . . C . . A . . . . . . CAT . GT . . . . . . . GATGA A . . . . .
blockSeqs : T A . . . . . . C . A . . . CA C G . . T G . A A . . . T . G . . T TG . T TCTGGGTATCTGATTGGTACAATCT . . . A . . . . G CG . A A . . . . . . AT . AA T ACT . ACCACT . . G . G T G A . . ATAAAG . . . CGAT . . C . . . GAAC T . . . . . . . . . . TGA . C . GG . . . . . C . . A . . . . . . GAT . GG . . . . . . . TGGTG C . . . . .
blockSeqs : . . . . . . . . . . . . TG . A . . G . . . . . G . . C . . . . . . AG . GC G GACG . . . . C . . . ATGT C . . . . . . . . . . CG . . . G . . . . . C . . A . . . . . . TTA . AC . . . . . . . ATC C . . . . .
blockSeqs : . G . . . ACC . . . . . . . . . . . . . . . G . . . . . C . . A . . . . . . TCA . AC . . . . . . . TC C . . . . .
blockSeqs : . T . . . . . C . . T . . . . . . . . . . . G A . . . . .
blockSeqs : . G . . . . . . . . T . . . . . . A . . . . .
blockSeqs : A . . . . .
blockSeqs : . . . . . .
blockSeqCons : *** *** ***** C*
originalCons : TCGTGTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTACA-ATTCCTCTTGTTTATAAAGACCAGT--CGTGTCCCCCAGATAAAGGACANCCCTAATC-----NTNCACGCCTT--G-TGTC-NC---GC-AGA-AA---A----GGACGGT-GT-AGTCAGTTATCGAG-G---ATCACAGAAATCAAAACGTCAAG-CGGGAAANC---TAGACGAGT--GTGTGAAACTGACGTT-CAC----AAA-CCTGTATTACACAC-GTCTGTCTGTGTGACAGGTAT-----T---AGGGGTGTGTTA--CACA--TATCTG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCGTGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------TACC--------GTGTGACAGA--------TATAGCAT----------------------CG---TGTGTATAG--GAGGANTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-GAAATATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTCACCACACTGTTAGAGAGACCTACATCACCA--TGG--ATACC-A--GCT-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-TGCGTAACNCTGANACGAGGACAGGCAAGATAACCCGGTACAACAGTACAGGACAACAGCGTAACCC--ATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGANC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCATCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGCAG-CCTG-AACTATGA-TGAC-AAA-ACTCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
finalCons : TCGTGTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTACA-ATTCCTCTTGTTTATAAAGACCAGT--CGTGTCCCCCAGATAAAGGACANCCCTAATC-----NTNCACGCCTT--G-TGTC-NC---GC-AGA-AA---A----GGACGGT-GT-AGTCAGTTATCGAG-G---ATCACAGAAATCAAAACGTCAAG-CGGGAAANC---TAGACGAGT--GTGTGAAACTGACGTT-CAC----AAA-CCTGTATTACACAC-GTCTGTCTGTGTGACAGGTAT-----T---AGGGGTGTGTTA--CACA--TATCTG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCGTGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------TACC--------GTGTGACAGA--------TATAGCAT----------------------CG---TGTGTATAG--GAGGANTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-GAAATATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTCACCACACTGTTAGAGAGACCTACATCACCA--TGG--ATACC-A--GCT-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-TGCGTAACNCTGANACGAGGACAGGCAAGATAACCCGGTACAACAGTACAGGACAACAGCGTAACCC--ATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGANC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCATCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGCAG-CCTG-AACTATGA-TGAC-AAA-ACTCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): AATATTTAAGATATTGATATATTCTATAGTAATTGTGATTTTCCAAGCAATTATAATGTCTATTTTTAGCACAATGAGTTACTAAAGAGCCAGATCTTCACATAATGATCAGAGCACGACACAGTACAAAGTATAAAGTACGACATTGCTCTCAATGCCAGGGGAACACCGAGTACTACTGTCACACGTGTAAACATGATCTGTGTTTACAGTGTAAAAATAAACATGATGCAGAAAAAAACACCAAATATCACCACGTAGTTATCTA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111 111111111111111111111111111
lowQualScore : 111 11 222222 33333333333 1111 111 11 111 11 2222222222222222222222222222222222222222222222222222222222 6666666666 22 33333 2222 1 1 44444444 1 555555555555 22 11 555555555555555555 33333333 111 77777777777777777777777777777777777777777777777777777777777 11 22222 2222222 22222222 33333333 000000000000000000000000000 1 1111 11 1111 11 11 33333333333 1111 11 33333333333 1 1 3333333333333333 11 4444444444444 1 11111 11111 1111 111 11111111 1111 1111111111111111 55555555555555555555555555555555555555555555555555 4444444444
lowQualScore : 0 3 00 2 444 11 333333 8 8 88888888888 9999 444 0 5 11 8 444 66 6 1 0 8 0 8 0 1 5 11 0 1 2222222222222222222222222222222222222222222222222222222222 0 0000000000 7 6 00 0 11111 4444 2 3 00000000 3 0 8 1 111111111111 0 6 33 33 1 555555555555555555 66666666 777 66666666666666666666666666666666666666666666666666666666666 11 00000 8 1 6666666 99999999 8 66666666 22 000000000000000000000000000 5 9999 1 0 11 8 7777 0 8 0 11 8 11 11 44444444444 1 0 3333 0 0 33 55555555555 8 0 0 8 0 0 1 1 4 0 3 6 3 4444444444444444 8 8 11 1111111111111 0 66666 777 6 6 6 00000 5 6 6 6 6 6 6 6 6 0 6 6 1111 6 5 5 000 5 5 5 5 5 77 5 66 3 5 5 88888888 66 5 5 0000 6 44 6 6 6666666666666666 00000000000000000000000000000000000000000000000000 0 5 5 5 5 5 3333333333 5 4 4 4 4 4
lowQualScore : . . .. . ... .. ...... . . ........... .... ... . . .. . ... .. . . . . . . . . . .. . . .......................................................... . .......... . . .. . ..... .... . . ........ . . . . ............ . . .. .. . .................. ........ ... ........................................................... .. ..... . . ....... ........ . ........ .. ........................... . .... . . .. . .... . . . .. . .. .. ........... . . .... . . .. ........... . . . . . . . . . . . . . ................ . . .. ............. . ..... ... . . . ..... . . . . . . . . . . . . .... . . . ... . . . . . .. . .. . . . ........ .. . . .... . .. . . ................ .................................................. . . . . . . .......... . . . . . .
lowQualScore : 2 2 55 5 000 00 000000 0 0 00000000000 0000 000 8 0 00 0 000 00 4 4 8 0 6 0 8 0 0 00 2 0 7777777777777777777777777777777777777777777777777777777777 7 7777777777 3 7 00 7 00000 0000 0 3 88888888 2 0 8 2 555555555555 2 5 88 88 2 888888888888888888 22222222 000 55555555555555555555555555555555555555555555555555555555555 00 00000 0 4 0000000 00000000 8 22222222 88 555555555555555555555555555 5 5555 0 8 00 0 0000 6 0 8 00 0 66 00 00000000000 0 2 2222 2 2 88 00000000000 8 0 2 8 0 2 0 0 2 8 2 5 2 8888888888888888 0 0 00 0000000000000 0 77777 555 7 7 7 22222 7 7 7 7 7 7 7 7 7 7 7 7 8888 7 2 0 111 0 0 0 0 0 55 0 99 6 0 0 11111111 99 0 0 5555 7 77 7 7 0000000000000000 00000000000000000000000000000000000000000000000000 4 7 7 7 7 7 4444444444 5 0 0 0 0 0
consensus : TCGTGTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTACA-ATTCCTCTTGTTTATAAAGACCAGT--CGTGTCCCCCAGATAAAGGACANCCCTAATC-----NTNCACGCCTT--G-TGTC-NC---GC-AGA-AA---A----GGACGGT-GT-AGTCAGTTATCGAG-G---ATCACAGAAATCAAAACGTCAAG-CGGGAAANC---TAGACGAGT--GTGTGAAACTGACGTT-CAC----AAA-CCTGTATTACACAC-GTCTGTCTGTGTGACAGGTAT-----T---AGGGGTGTGTTA--CACA--TATCTG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCGTGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------TACC--------GTGTGACAGA--------TATAGCAT----------------------CG---TGTGTATAG--GAGGANTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-GAAATATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTCACCACACTGTTAGAGAGACCTACATCACCA--TGG--ATACC-A--GCT-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-TGCGTAACNCTGANACGAGGACAGGCAAGATAACCCGGTACAACAGTACAGGACAACAGCGTAACCC--ATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGANC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCATCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGCAG-CCTG-AACTATGA-TGAC-AAA-ACTCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
Reference ( family-1752 ) : TCGTGTTCTCCTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACA---CCTCGCCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCAAACAGAGCGGTACA-ATTCCTCTTGTTTATAAAGACCAGT--CGTGTCCCCCAGATAAAGGACANCCCTAATC-----NTNCACGCCTT--G-TGTC-NC---GC-AGA-AA---A----GGACGGT-GT-AGTCAGTTATCGAG-G---ATCACAGAAATCAAAACGTCAAG-CGGGAAANC---TAGACGAGT--GTGTGAAACTGACGTT-CAC----AAA-CCTGTATTACACAC-GTCTGTCTGTGTGACAGGTAT-----T---AGGGGTGTGTTA--CACA--TATCTG---GTGT-----------GACGT--------CAGA--TCAGG-TC-----TG--GNT-GA---ATCGTGAT-T--GG-ACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------TACC--------GTGTGACAGA--------TATAGCAT----------------------CG---TGTGTATAG--GAGGANTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-GAAATATAACG--TCA---------NNAAACTGTCTATAGACAANAAAACAGTCACCACACTGTTAGAGAGACCTACATCACCA--TGG--ATACC-A--GCT-GTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-TGCGTAACNCTGANACGAGGACAGGCAAGATAACCCGGTACAACAGTACAGGACAACAGCGTAACCC--ATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACGANC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AACGGT-GATATTAT-TGTGTCTGACTCGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCATCA-GG-A--------TC--ATC-A-CTA-CGNCC-ACGNGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGCAG-CCTG-AACTATGA-TGAC-AAA-ACTCACCTTCTCTGGGTCGGATCA-GGT----G-CACCAAAACAGTGT-GT-GTAT-A-TAGA-TATATT
gi|1 : CATGTTCTCCTCGCAGGGATCAAAACTGATATCCAAGC------------AATCTGTGGCCGTCTATCACAGGTGTTGATAAAAG---CCCAGAG--ACT------GAAGGACCTGATTG-ACACT-GTGGT-----------ATTTGATGTTA---AAAGAAGGTACAAACGTTTACTCATTGAGAGAATACAACAACAGAG--GCGAA-TAATGAA---GCATTTTCTAACCCACATACAGAACTATCAAGACAAATATGAACAA-TCAGCAAACAGAGCGGTGCA-ATTTCTCTTGTTTATAAAGACCAGT--AATGTCCCTCGGATAAAGGACACCCCTAATCCTCCTCTACACGCCTT--GCTTTC-ACTGAGTGAGA-AATTCAACATGGAGGAT-GTGAGTCAGTTATTGAG-GGAAATTACAGAAATCAAAA--TCACGACGGGAAAA-----AGACATGTCGGAATAGACCTGA-GTTACACGTCTAAA-CCTGAGTTACACAA-GTCTGTCTGCGTGACAGGTAT-----TATAAATGGTGT-TTAT-CACA--TATCCT---GTGT-----------GACGT--------CAGA---CAGGATC-----TG--GAT-GAGTGATCATAAT-T-----ACA--ACC--------------TCATCTTGACAG--ACAC-----AACAGG-AGTCACTATT-------CACC--------ATCTAACAGA--------TATAACAT----------------------GGAATTG-GTAT-G--GAGGGTTACACAC--AGTGA-ACA----GTGCTGGGGAAC-TAATTTAT--ATCGATAG-CAACGATGCCG--TCA---------CTAAACTATCTGTAGACAACAAAAGAGTCACCATACTGTTAAAGAGA---ATAAAACCA--TGG--TTTCCTA--GGT-GTGTGTACTATTCCCCCTCCAGTGGGGATTTGTTTGTCG-GATTGTGGAACCCAAAAACTAAGAAGGGTAAGGTAACCCGGTTCAACAGTAAAGG-CGACCACGT
gi|1 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggAACCC--A-AAAACTAAG---AAG-GGTAAGGTAAC-CCGGT--TCAACAGTAAAGGCGACCA-------CGT-C-CT-GACCATTCCAAA-C-AACGAAGACGAA-A---GT-CACGCTA-TGTATAGGA-GT-CCTTGG-TA-CAT-C-ACG-GAAAATAGG-AATGGG-GATGTTAT-TGTGTCTGAATATA-TTAAA-GATAAATGTGGTGCTGTAGTGGTGACAGAC-CAC-A-GGGGGAGATA-TCG-ATTTTCCT-ACA--AG-GG----T--CC-TCG-GGAA--------TC--GCC-A-CTA-CGACC-AGTAGGAATCTG-TACGGACGTGC-TGTCcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|1 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattgtggCCACGGAG-CCTG-GGTTATGA-TGAT-AAA-TCTCACCTTCTCTGGGTCGGATCACGGT----G-GAACAAAACAGTGT-AT-GTAT-A-CAAA-TATATaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagccacggagcctgggttatgatgataaatctcaccttctctgggtcggatcacggtggaacaaaacagtgtatgtatacaaatatatagagaggag
gi|11 : ctgtttaatttcaggaaaatgtgtttctaaatgcctatacccttcacgggatggatgtgctaggatgcaccgcacaatataaagtacgacaatgttttcaatgtcagagtgacaccgagttctactgccatatatgtaaacacgacctgtgtgtgcagtgtaaagagagacatgcctttgatctacacaccaaagaccatgatattgtcatttaccgagagaagttcgactacattcccaaacaagaggcatgcgtcagacatccagacaggatctatgaaaagttttgtgaatcatgtgaactgtctatctgttttcggtgtgtagagcacaaagcacaccacgtaatggacattagaacagcatatcaaacaaagcgacaacaacatagggaaatcattctcaacatcagaaatgagaccctctttaccgggcatgttctcctcgcagggatcaaaactgatatccaagcaatctgtggccgtctatcacaggtgttgataaaagcccagagactgaaggacctgattgacactgtggtatttgatgttaaaagaaggtacaaacgtttactcattgagagaatacaacaacagaggcgaataatgaagcattttctaacccacatacagaactatcaagacaaatatgaacaatcagcaaacagagcggtgcaatttctcttgtttataaagaccagtaatgtccctcggataaaggacacccctaatcctcctctacacgccttgctttcactgagtgagaaattcaacatggaggatgtgagtcagttattgagggaaattacagaaatcaaaatcacgacgggaaaaagacatgtcggaatagacctgagttacacgtctaaacctgagttacacaagtctgtctgcgtgacaggtattataaatggtgtttatcacatatcctgtgtgacgtcagacaggatctggatgagtgatcataattacaacctcatcttgacagacacaacaggagtcactattcaccatctaacagatataacatggaattggtatggagggttacacacagtgaacagtgctggggaactaatttatatcgatagcaacgatgccgtcactaaactatctgtagacaacaaaagagtcaccatactgttaaagagaataaaaccatggtttcctaggtgtgtgtactattccccctccagtggggatttgtttgtcggattgtggaacccaaaaactaagaagggtaaggtaacccggttcaacagtaaaggcgaccacgtcctgaccattccaaacaacgaagacgaaagtcacgctatgtataggagtccttggtacatcacggaaaataggaatggggatgttattgtgtctgaatatattaaagataaatgtggtgctgtagtggtgacagaccacagggggagatatcgattttcctacaagggtcctcgggaatcgccactacgaccagtaggaatctgtacggacgtgctgtcaaacatccttgtgtgtgatgataattctcaatcagtacatttgattaacaaaaacggtcaattcctgtccctcctgttgacggaacaacacgggataaaaaagCCAACACAGTGT-GTGGTAT-A-TAGATTATATTagagaggag
gi|12 : AT-----ATC-AGC-ACGACGAC--CCGGT-CAC-ACC-TGTATATGT-ATTCCTAGA-TAGTAT-CCACATGAGAATAGGGAATGGT-GATATTATGTGTGTCTAACTTGAATTACAATATAACCATGGTGCTGTAGTGGTGACAGAG-C-C-GCGGGGGAGACA-TCG-ATTCTCCTAACA-CAGCGACTC-T--CGATCA-GG-A--------TC--ATC-A-CTA-Ccagaggagtactctctgaaatcggtaagtactagtagtactgtagtttattgtactagtagtatcagttaagtacaataacataaaacaaaaataggaagccattataaattatttggatgaacatgtatattgtttaggaggtgtggagtctgagataattaagtttacagatagagcttagttatagattacagtat
gi|13 : aAT-----A-CCAGC-ACGACGACCACCGGTTCACAAACCTGTATATGT-AT-CCTAGA-TA-TATTC-ACA-GAGAATAGG-A-TGGTTGATATT-T-TGTGT-TAACTCGA-TTACA-TATAAC-ATGGTGCTGTA-TGGTGACAGAG--GCTG-GGGGGAGACA-TCG-ATTCTCCT-ACA-CCG-GAC-C-TTGCCATCA-GG-A--------T---ATC-A-CTA-
gi|14 : aCCATACAG-TCTG-AACTATGA-TGAC-AAA-AATCACCTTCTCTGGGTCGGATCA---T----C-CACAAAAACAGTGT-GT-GTAT-A-TAGA-TATGT
gi|15 : ggatatacataCCAACACCGTGT-GT-GTAT-ATTAGA-TAacagaggaggtactctctgactggtaagtactagtagtactgt
gi|16 : CAACACAGTGT-GT-GTAT-A-TAGA-TATATatacaggggttactctctgattggtaatactagtgtctgatagtttat
gi|2 : TTGTGTTCTCTTGGCAGGAATCCAAACGGGTATCCAAACTTGTCCTCCACAAATCTGTCACCGTCAATCACAGATGTCAACAAAAG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-GTGGT-----------ATGTGATGTTA---CAAGA---TACAGAGGTTTATTGATTGCTAGAATACAACAACAGAA--GAGAA-AAATGAACAGACG---CCTCACCCACCTACAGAACTATGAGGATATATATGAACAA-TCAGCCAACAGAGTGCTACA-ATTCCTCATTTTTATTAAGACCAGT--CGTGTTCCCCAGATAAAGGACANNNNNNNNN-----NNNNNNNNNTTC-G-TGTC-CC---CC-AGATAA---A----GGACAGTTGT-AGTCAGTTATTGAGTGCC-ATCACAGAAATCCAAACGTCAA--CAGGAAACCAATTAGACGAGT--GTGTGAAACTGATGTT-CAC----A---CCTGTATTACACGC-GGCTTTCCGTGTGACAGATGT-----T---AGGGATGTGTTA--CACA--TATCTG---ATGT-----------GACGT--------CAGACNTCAGG-TC-----TG--GGT------ATC-TGAT-T--GGTACA--ATC--------------TCATCTTGACAG--ACAC-----AACAGG-AGGCACTATA-------CACC--------GTGTGGCAGA--------TATAGCAT----------------------CA---TG-GTATAGAGGAGGACTACACAC--AGTGA-ACA----GTTCTGGTGAAC-TGATTTAT--ATAGACAG-TAAATATAACA--TCA---------ACAAACTGTCTATAAACAGTAAAACAGTCACCACACTGTTAGAGTGGCCTACATCATCA--TGG--AGACC-A--GCTTGTGTGTACTGCTCCCCGTCCACTGGAGATCTGATGGTCGCGA-CGCGTAACTCTGATACAAGGACAGGCACGATAACCCGGTACAACAGTACAGGACAACAGNGTAACCCTCATAAAAC---G---ACA-GGCAAGATAAC-CCGGT--ACAACAGTACAGGACAACA--------GG-TACA-GACCAT-----A-C-AGC-ACGACGAC-ACCGGT-CACAACC-TGTATATGT-AT-CCTAGA-TA-TAT-C-ACA-GAGAATAGG-AATGGT-GATATTAT-TGTGTCTAACTTGA-TTACA-TATAACCATGGTGCTGTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-CAG-GAC-C-T--CCACCA-GG-A--------TC--ATC-T-CTA-CATCC-ACTAGGAATCTG-TACAGACGCGC-TGTCNNNNNNNNNNNNNNNNAACCTCCTTCAGGATCATCACTATCACCACACGGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACGTAG-CCTG-AACTATGA-TGAT-AAA-TCTCACCTACTCTGGGTCGGATCA-GAT----GACACCAACACAGTGC-GT-GTAT-A-TAGA-TATANTacagaggaggtactctctgattggtaagtactagtagta
gi|3 : TCGTATTCTCCTGGCAGAAATCCAAACTGATATCCAAACTTGTCCCTCACAAATCGGTCACCGTCAGTCACCGATGTCAACAAAGG---CCCAGAG--ACT------AAAGGACCTGATTG-ACATC-ATGGT-----------ATGTGATGTTA---CAAGA---TACAGAGATGCATTGATTCATAGAATGCAACAACAGAA--GAGAA-AATTAAACAGACA---ACTTTTTCACATACAGAACTATGAACATAGATATGAACAA-TCAACAAACAGAGTGGTGCA-GTTCCTCTTGTTTATAAAGTTCAGT--CGTATTCCCCATATAAAAAACAGTCCTAGTC-----AGTTA----TTGAG-TGTCATC---AC-AGA-------------AC--T------CCAAATATCA----------ACAGG----AAAACGACAAG-TAGGAATGC---TCGAAGA-----TGTGAAACTGACGTC-CAC------A-CCTGTATCACATAC-GTCTGTCTGTGTGAGAGGTAT--------------TGTATTA--CACA--CGTCTGTCCGTGTAAGAGGTATTAGACGTGTGATTCACATA--TCTGG-TG-----TGACGTCAGA---ACCGCGATAT--GG-ATA--ATCTGATGTAAAGAAATTCATCCTGATAG--ACAT-----AACAGG-AAACATAATA-------TACC--------GTGg
gi|4 : cacacagtataaagtacgacattgctctcaatgtcagggggacaccgagtactactgttacacgtgtaaacatggtctgtgtttacagtgtaaagagagacatgtcattgatgtagataccaaacaccatggtgtcgtaatttaccgtgagaaattcaaatgcgtcccttcccgagagacctgtgtcaaacatccacacatcaaatacctgtactgtgatcagtgtaagtattccatgtgctatcgttgcacagatcatcgaacttacaagctgatagatcttagaacagcctatcaaactaagcgacatcaacacagaacattcattgccaatatcagaagtgagactctctataactgTCGTCTTCTCTTGGCAGGAATCCAAACTGATATCCAAACTTGTCCCCCAAAAATATCTCACTGTCAATCACAGATGTCAACAAACG---CCCAGAG--ACT------GAAGGATCTGATTG-ACACT-ATGGT-----------ATGTGATACCAAAACAAGA---TACAGAGATTTATTGATTGCTAGAATAAAACATCAGAA--GAGAA-AAATGAACAGTCA---CCTCACCCACATACAGAACTATGAAGACAGATATGAACAA-TCAGCCAACAGAGCGATACA-ATTCCTCTT-TTTATAAAGACCAGT--CGTATCCCGCAAATAAAGGACAACCCTAATC-----TTCCAC
gi|5 : gtaattaatgatatgtatatgttgataacattattatgatgtgctatataattatactgtctgtttattttcagcagattgtatccctaaagacccagacctccacatcatggacacactaggactcagtacacagtataaagtacgacattgttctcaatgtcaggaggacaccgagttctactgtcacacgtgtaaaaatgatctttgtttactgtgtaaagaaagacatgtcattcatctaaacaccatacaacatgatgttgtaatttatcgtgagaggtttggctacatcccgagacatgagatctgcgtccggcatccagacaggatctatgaaatgttctgtcagtcctgtgaactttctgtctgtttccaatgtctagagcaccgaaaacaccaaatattggacattagaacagcctatcaaacaaagcgacaacaacaccgaaaaatcattgacaacatcagaagtgagagtctctataactgATCTTGACAG--ACAC-----AACAGG-AGACACTATG-------TACC--------GTGTGAGAGA--------TGTGTCATTATTGATTGGAGGACCTGGGTACA---TGTGTAGAG--GAGGGATACACAC--AATGA-ACA----ATTCTGGGGAAC-TGATTTAT--ATAGACAG-GGATTATAACA--TCA---------AAAAACTGTCTATAGACAAAGAAACAGTAATCACACTGTTAGAGAGTCCTACATCACCA--TGGATATATC----GCT-GTGTAAACTGCTCCCCATCCACTGGAGATCTGATGGTCGCAA-TGTTTAACACTAAGATAAAGACAAGCAAGATAACCCGATACAACAGTACAGGACAACA-CG--ATCT------GAC---G---ATACAGCAGGACAACACCGGTAAAGAACTGTATAGaacacctgctgcttt
gi|5 : --ATAAA-----G---ACA-AGCAAGATAAC-CCGAT--ACAACAGTACAGGACAACA-------CGA-T-CT-GACGAT-----A-C-AGC-AGGACAAC-ACCGGT-AAAGAAC-TGTATA-GTAAT-CCTATA-TA-TAT-C-ACA-GTGAATAAG-AACGGT-GATATTAT-TGTGTCTGAC-----------TATAACCATGGTGCTTTAGTGGTGACAGAG-CGC-G-GGGGGAGACA-TCG-ATTCTCCT-ACA-AAG-GAC-C-T--CCATCA-GG-A--------TC--ATT-A-CTA-GATCC-ACGTGGAATATG-TACAGATGCGC-TGTCtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|5 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagCCACTCAG-CCTG-AACTATGA-TGAT-AAA-ACTCACCTTCTCTGGGTTGGAGCATGGT----G-CAACAA---AGTAT-CA-ATAT-A-TAGA-TATATacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaccactcagcctgaactatgatgataaaactcaccttctctgggttggagcatggtgcaacaaagtatcaatatatagatatatagagaggaggtactctctgactggtaagtaatcgtagta
gi|6 : atcttgacagacacaacaggagacactatgtaccgtgtgagagatgtgtcattattgattggaggacctgggtacatgtgtagaggagggatacacacaatgaacaattctggggaactgatttatatagacagggattataacatcaaaaaactgtctatagacaaagaaacagtaatcacactgttagagagtcctacatcaccatggatatatcgctgtgtaaactgctccccatccactggagatctgatggtcgcaatgtttaacactaagataaagacaagcaagataacccgatacaacagtacaggacaacacgatctgacgatacagcaggacaacaccggtaaagaactgtatagtaatcctatatatatcacagtgaataagaacggtgatattattgtgtctgactataaccatggtgctttagtggtgacagagcgcggggggagacatcgattctcctacaaaggacctccatcaggatcattactagatccacgtggaatatgtacagatgcgctgtcacacatcctggtgtgtgattataacacccacacagtacagatgattgacaaggacggtcatttcctttctctgttactgacacaacaacacgggataaaaaaaTCAACAAAAGAAGCACAGAGTGACTCTCTTTGAAGGATCTGGTTGGACACTAGTGGTTAAGTAGAATGATATCATGTTA-----AGA---TACAG-GGTTTATTAATTGCTA-ATTA-ACCAACAGAATAGAGAATAGATATACAGACA---CCTTGTTAAAATACGAGACTATGAAGA--AATATGA-CAACTGGGCAAACAGAGCGGTACGTAT--CTCGTGTTTATAAA-AC--GTCACGTGGCCTCagagaggaggtactctctgactggtaagtaatcgtagta
gi|6 : AC----AAATCCTGTATTAC-CACAGTCT-TCTGTGTGACAGGTTTGGGGGT---CGGGGTGTGTTGGGCACAGCTTTCTG----TG------------GACGT--------CAGA--TCAGG-CCGTTCTTG--GTT------AT-GTGAT-TTAAA-ACAGTATC---------------CAT-TGGACAGCAGCACCGCCAAACAGGAAGGAACTATATTTATTTTGCCCTTCTAAAGTGTGA-AGAGATTCTACTATAG-AC----------------------CG---TGTTTGTA----AGGAAT-CACATCAAGTGAGACATAATATCTTGGTAAACATGA-TTATTCATAGACAGTGAGATATTATGGATTAGTATGGAACCAAAACTGT-TCTAGATAATAAgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactacaaatcctgtattaccacagtcttctgtgtgacaggtttgggggtcggggtgtgttgggcacagctttctgtggacgtcagatcaggccgttcttggttatgtgatttaaaacagtatccattggacagcagcaccgccaaacaggaaggaactatatttattttgcccttctaaagtgtgaagagattctactatagaccgtgtttgtaaggaatcacatcaagtgagacataatatcttggtaaacatgattattcatagacagtgagatattatggattagtatggaaccaaaactgttctagataataa
gi|7 : tcaacaaaagaagcacagagtgactctctttgaaggatctggttggacactagtggttaagtagaatgatatcatgttaagatacagggtttattaattgctaattaaccaacagaatagagaatagatatacagacaccttgttaaaatacgagactatgaagaaatatgacaactgggcaaacagagcggtacgtatctcgtgtttataaaacgtcacgtggcctcgtggactatactctcgcactcagaagaacagtccatagccaagtcatatgtgaggatattctgtatacttaatttcacaaggaattacaactgggacaaataatatcaggaagactgacaggatggaataatgatcgattgtgtgtatagatctatgcgttcatattctactAGGACTACACAC--AGTGA-ACA----GTTCTGGTGATC-TGATTTAT--ATAGACAA-GAAAGGCAACA--TTA---------GCAAACTGTCTAGAGACAAGAAAACAGTTACCACACTTTCAGAGAGACT---ATCAACAGTTAG--A--CC-ACTG-T-GTGTGTAATGCTCCCCGTCCACTGGAGATCTGATGGTCGGGA-TGCATAACGCTGATACGGGTACAGGCAAGCTAACCAGGTACAACAGTACAGGACAA
gi|7 : cGCATAACGC---TGATAC---GGGTACA-GGCAAGCTAAC-CAGGT--ACAACAGTACAGGACAAGATCTAGACCGAAT-CTTGACCAT-----A-G-AAG-ACAACAGG-ACCGGT-CAAATGT-TGTATGCTT-AT-CC-ACACTA-TAT-C-ACA-GAAAATACA-AACGGT-GATATTAT-TGTGTCTGATTCG-----CA-CA-----ATCGTGCTGTAGTGGTGACAGAG-CGC-T-GGGGGAGACA-TCG-ATTCTCGT-ACA-CAG-GAC-C-T--ACATCA-GG-A--------TC--ATC-A-CTA-TTACC-ATGGGGAATTTG-TACAGACGAAC-TGTCgatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|7 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatCCGCGAGG-CCTG-CACTATGA-TGAT-GAA-ACTCACCTTCTCTGGGTCGGATC----TTTCAA-CACCAAAACAGTAT-CT-GTAT-A-TAGA-TATGTacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaccgcgaggcctgcactatgatgatgaaactcaccttctctgggtcggatctttcaacaccaaaacagtatctgtatatagatatgtatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|8 : caggactacacacagtgaacagttctggtgatctgatttatatagacaagaaaggcaacattagcaaactgtctagagacaagaaaacagttaccacactttcagagagactatcaacagttagaccactgtgtgtgtaatgctccccgtccactggagatctgatggtcgggatgcataacgctgatacgggtacaggcaagctaaccaggtacaacagtacaggacaagatctagaccgaatcttgaccatagaagacaacaggaccggtcaaatgttgtatgcttatccacactatatcacagaaaatacaaacggtgatattattgtgtctgattcgcacaatcgtgctgtagtggtgacagagcgctgggggagacatcgattctcgtacacaggacctacatcaggatcatcactattaccatggggaatttgtacagacgaactgtcacacatcctggtgtgtgatgctctcacccacacagtacaggtgattgacaaggacggctattttctatcgctgttgttgacaccacaacaagggataaactcaGACA-AG-CGCGG-GGGGGAGACAGTCGCATTTTCCT-ACAGCAG-AAC-CTT--CCTTCA-GG-AATCCCCCCTC--ATCAA-CTATCATCCAACACGGAATCTG-TA-AGACGCGCTTGTCatagaggaggtactctctgacttgtaagtacaagtagtactgta
gi|8 : TCCATACAG-TCTGGAACT-TGAATGAC-AAAGAATCACCTTCTCTGGGTCGGATCA--AT----C-CACAAAAACAGTGTGGT-GTATCA-TAGA-TAaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacatatccatacagtctggaacttgaatgacaaagaatcaccttctctgggtcggatcaatccacaaaaacagtgtggtgtatcatagatagtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|9 : gacaagcgcgggggggagacagtcgcattttcctacagcagaaccttccttcaggaatcccccctcatcaactatcatccaacacggaatctgtaagacgcgcttgtcaacacatctggtgtgtgagattaggcaccagcacagtacagtattgaacaaggacggtccacttcctgtctctgttactgcaccacaaaatgggatagtacataGACAGAGGCGC-G-GGGGGAGACA-TCG-ATTTTCCT-ACA-CAG-AA--C-T--CCTTCAGGG-A--------TCCTATC-ACCTA-TCACC-ACACGGAATCTGTTACAGACGCGC--GTCgtgtcgaggaggtactctctgactggtaagtactagtagtgaacttgtaggctac
gi|9 : CCATACAGGTCT--AACTATGA-TGACAAAA-ATTCACCTTC-CT-GGTCGGATCA--------G-CACCAAAACAGTG--GT-GTAT-A-TAGA-TATGTTacacatcctggtgtgggatattagcaccagcaccagtacaggattgattgacaagggacggtccactctgttctcttttaactgacaccacaaaaatgggatatacataccatacaggtctaactatgatgacaaaaattcaccttcctggtcggatcagcaccaaaacagtggtgtatatagatatgttacaggaggtactcctctgacttggaagtactagtagtactgttagtctac
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|10 ): AATATTTAAGATATTGATATATTCTATAGTAATTGTGATTTTCCAAGCAATTATAATGTCTATTTTTAGCACAATGAGTTACTAAAGAGCCAGATCTTCACATAATGATCAGAGCACGACACAGTACAAAGTATAAAGTACGACATTGCTCTCAATGCCAGGGGAACACCGAGTACTACTGTCACACGTGTAAACATGATCTGTGTTTACAGTGTAAAAATAAACATGATGCAGAAAAAAACACCAAATATCACCACGTAGTTATCTA