lowQualScore : 1111111111111111111111111111111111111111111111 111111111111111111111111 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 2222222222222
lowQualScore : 1 333333333 1 11 1 11 1 11 111 2 2222 1 1 111 11 1 111 1 111 22222222 1 33333333333333333 111 1 1 22222 4 11111 11 1 1111 22 6666666666666 1 222 1111 1 1 11 44444444444 3 11 3333333333 333333333 2222222222222222222222222222222222222222222222 1 111 1 1 7777777777777777777777777777 1 44 11 4 4444 222 444444444444444444444444 22222 3 11 6666666666666666 1 11111 11 1 22 1 2 222222 111 44444 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 333333 1 1 2 11 11 111 22222 111 11 4444444 111 4444444444 1 5555555 1 11 1 1 1 33333333333333 77777777777777 2 55 1 5555555555 22222 333333 2222222222222 33333333 2 1 111 66666666666666666666666666 222 4444444444 22222 11 1 1 11 1 22 33 11 222 33 4444444444 444 1 333333333 2 1 555555 2 1 2 44444444
lowQualScore : 0 0 777777777 4 3 3 0 22 8 8 5 11 4 8 11 444 4 4444 8 0 8 5 0 7 8 99 3 1 6 222 22 9 6 2 111 6 6 8 0 88 111 66666666 99 888 6 99 6 3 55555555555555555 7 111 6 2 3 2 3 7 8 5 88 00000 0 6 55555 0 1 3 11 0 8 6 8 3 5555 8 8 8 22 0 0 7777777777777 8 0 3 3 111 7777 0 6 8 0 3 0 55 11 99999999999 8 2 11 1 5555555555 0 0 555555555 0000000000000000000000000000000000000000000000 0 777 0 0 9999999999999999999999999999 2 0 22 11 4 0 2 44 2 8888 8 222 8 8 222222222222222222222222 8 00000 8 0 8 8 8 11 8 9999999999999999 5 6 3 8 6 77777 77 8 8 3 88 1 5 3 333333 8 3 000 99999 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 7 222222 0 5 0 99 55 33 3 444 0 44444 444 8 99 7777777 000 3 2222222222 1 2 0000000 3 88 3 3 3 99999999999999 44444444444444 8 6 00 3 8888888888 77777 6 888888 0000000000000 6 6 7 66666666 6 3 888 33333333333333333333333333 333 5555555555 33333 88 7 3 3 66 6 00 7 11 88 333 77 00 5555555555 888 5 666666666 0 5 2 444444 0 6 5 0 22222222 2 2 2
lowQualScore : . . ......... . . . . .. . . . .. . . .. ... . .... . . . . . . . .. . . . ... .. . . . ... . . . . .. ... ........ .. ... . .. . . ................. . ... . . . . . . . . .. ..... . . ..... . . . .. . . . . . .... . . . .. . . ............. . . . . ... .... . . . . . . .. .. ........... . . .. . .......... . . ......... .............................................. . ... . . ............................ . . .. .. . . . .. . .... . ... . . ........................ . ..... . . . . . .. . ................ . . . . . ..... .. . . . .. . . . ...... . . ... ..... ............................................................................................. . ...... . . . .. .. .. . ... . ..... ... . .. ....... ... . .......... . . ....... . .. . . . .............. .............. . . .. . .......... ..... . ...... ............. . . . ........ . . ... .......................... ... .......... ..... .. . . . .. . .. . .. .. ... .. .. .......... ... . ......... . . . ...... . . . . ........ . . .
lowQualScore : 7 0 000000000 0 2 3 8 66 2 0 8 00 6 0 00 000 0 2222 0 6 0 0 6 0 0 00 3 7 7 777 77 5 7 8 777 7 7 0 0 88 777 77777777 22 777 7 22 7 3 77777777777777777 2 777 7 5 3 5 6 0 0 2 88 00000 0 7 44444 8 0 8 00 6 0 0 0 2 4444 0 0 0 22 8 8 6666666666666 0 2 2 2 000 0000 6 0 0 8 2 0 00 00 00000000000 0 0 00 4 0000000000 8 8 888888888 8888888888888888888888888888888888888888888888 0 555 0 5 5555555555555555555555555555 5 0 55 00 2 0 5 55 5 8888 0 000 0 0 000000000000000000000000 0 00000 0 2 0 0 0 00 0 0000000000000000 0 7 3 0 4 00000 88 0 3 3 33 0 0 7 000000 0 8 555 99999 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 8 222222 0 5 0 88 88 88 0 000 8 00000 000 0 88 5555555 555 2 7777777777 0 0 3333333 3 33 3 3 3 33333333333333 00000000000000 3 7 00 3 3333333333 00000 7 333333 0000000000000 7 7 3 33333333 7 3 777 66666666666666666666666666 333 3333333333 77777 33 3 3 3 33 0 00 3 77 33 333 33 00 0000000000 000 0 000000000 0 5 5 000000 0 0 5 0 00000000 5 5 5
consensus : ATAAATGAGACATCTATA-TAACATG-------TTTNCAAAAATGTGCTCAAAAGTTA-AATGCTGATCATGGTTA-CTATGGAAACAGGTGAAA-TATNATCAA--ATTTGGCTATTTTCCAGAAA-TGG--GTAGTTTT---TGCACAAAA-ACTCAAAA-CAACAAATTA-TTAATTGTCTTAAAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC-AATTT-GAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--A-T-CCCATC--CAC------------CTCCAAAAAAA---TA-GCAGTGCTTTTTAAAACAANTNATTGATGTTTTTA-ATCAATCT-AAAATA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTNAT---TAGGT-AGTAAA-GTTACATA-GAN-ACACAAATAATATGGCGGGATGA--G-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTTC-A-AAAATACCT----CTCTATTCACC-CATTCGAACAAAGNAA--GTGTGA-G---------GGAATG-CCAGGTCCAAGACGTTT--GCTGGAGATAGAG----------CCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAA-------CC------------CAAAA--AAAAAATT----------ATCTAGCTAGC-AA---TT-TATCGAA--TAT--ACANGT--------------TTAAAGCGGGTCGAG-AAATGTTTCC-AATGGAAGTGGTTTCCA-TNCCATGCATTTTTAAAANGTTCA---AATTATTGAAACC-ATA---GGAGC-ACG-T-A-------ATATTTCATATACAAAT-C-----TAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---A------TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGAAT-ATGC-GTGCCTGACATAGCCT-AAAATG------TT-AATATTGACCTTA-----AAAATGATAG-----TA----TATAA-TGGA-CCCCC-----CA-----CCCCCTTTC----CT---------------TG---TAAA-CTT----------TTTGTTTTNTTT--TC--GAAATACA-CCACAAGTAATAATGT-TTTCATAGACAT--TANACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTCATAC-G----TTGTAAACAAATTACA-ATAT-G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC---G-C-GNTTGA-TATTA-ACG---TA--AC-GTCAATATGGAAGAA-CCA-TTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATA-CGT-TT-TAATGTCTTTTGT-AAATTCGCAAT-C-ATTATA----AAATNTGT---AT-C-TA-AAAATC-AACGTTTA-TT-TAAT-TACTTT--TGATG--ATACTTGAAAAATA-TTTG-TGACTAATTTGAAT-TGAA-NAGAATTG-AAAATACTGAG--TACG---CTGGCTAAAAAAAAAACCAAAACCAGCAAAC-ACAAAATA-CATACATGGAAATTATACCNGAGTGTAGGCCTTCATTTATACANTGGTACAAAGTCATAGAGCAGATTTAAGAGGGAGGGCCTGCCCNANGAGNCCC
Reference ( gi|2 ) : ATGAATGAGACATCTATA-TAACAAG-------TTTACAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTTG-CTATGGAAACCGGTGAAA-TATAATCAA--ATTTGACTATTTTCCAAGAA-TGA--GTAGTTTT---TGCA-AAAA-AC-CAAAA-CAACAAATTA-TTAATTGTCTTACAATTGTATTTTTCAAATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTG-ATAATGGACAAATTT-GAAGTGATTTTCATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TCTTT--ATGTC-T-TAAT-AACTTTT--A-T-CCCATC--AAC------------CTCCAAAAAAA---TA-GCAATGCTTTTTGAAACAACTAATTGATGTATTTA-ATCAATAT-AAAATA-----AAACTTTTGGGAATCTCGCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCAT---TAGGT-AGTAAA-GTTACATA-GAT-ACACAAATAATATGGCGGGATGATTGTTCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTTC-C-AAAATACCT----CTCTATTCA-C-CATTCGAAGAAAGAAA--GTGTGA-----------GGAATG-TCAGGTCCAAGACG-TT--GCTGGAGATAGAG----------CCATGTTAGTACAGGTG-ACTGAGGTGAGTGTACAA-------CC------------CAAAA---------T----------ATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAG-AAATGTTTTCAAACTGAAGTGGCTTCCATTCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-A-------AT-------------AT-C-----TAA-GCATATAAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---AC-----TAGCC-ATTAGGTG-GTTGGATT--G--AACCCGATATCCC-TC-ATATGTAT-ATGG-GTGTCTGCCATAGCCTAAAAATG------TT-AATATTGACCTTA----GAAAATGATAGACTAGTACATGTATAA-TG---CCCCC-----C------CCCCC--------CT---------------TG---TA---CTT----------TTTGTTTTATTT--T---GAAATACA-TCACAAGTAA-AATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCACTGTCATA--G----TTGTAAACAAATTACAGATGT-GACACTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT---GACAGGTTG--TATTACATG---TAT-AC-GTCAAAAT-GAAGA--CCA-TTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCCTACATTTTTTTTGTAATATATGCACTCTGAGTCTGAAATTGAGATA-CAT-TT-TAATGTC-TTTGT-AAATTCGCAAT-C-ATTATA----AAATTTGT---AT-CATA-AAAATCAAGCATTTATTTATAAT-TACTTT--TTATG--ATACTTGAAAAATA-TTTG-TGACTAATTTAAATATGAA-GAGAATT--AAAATACTGAG--TACG---CTGGCCAAAAAAAAAAAAAAAAAAAAAAAACAACAAAAAACCATACATGGAAAT---ACCC--GTGTA-GTCTTCATTTATACACTGGTAC-AAGTCATAG-GCGGATTT-AGAGG--AGGCCTGCCCCAGGAGCCCCC
gi|3 : ATAAATGAGACATCTATA-TAACATG-------TTTACAAAAATGTGCTCAAAAGTTA-AATGCTGATCATGGTTA-CTATGGAAACAGGTGAAA-TATAATCAA--ATTTGGCTATTTTCTAGAAA-TGG--GTAGCTTT---TGCACAAAA-ACTCAAAA-CAGCAAATGG-TTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATCTA-GGAGGAAAAA--TTTA-ATAATGGAC-AATTT-GAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------GTTTT--ATGTC-T-TAAT-AACTTTT--ATT-CCCATC--TAC------------CTTCCAAAAAA---TA-GCAATGCTTTTTAAAACAAGTCATTGATATTTTTA-ATCAATCT-AAAATA-----AAACTCTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTTTTTCCCCTTTGGTACT-CTTCAACGTAAT---TAGGT-AGTAAA-GTTACATA-GAA-ACACA---AACATG-------------TCTCACAACTGGTGGAATTTAGAATAT-TGTACTCGCTTGAAGACATGTGGCCTTCAA-AAAATACCT----CTCTATTCACC-CATTCGAACAAAACAA--GTGTGA-----------GGAATG-CCAGGTCCAAGACGTTT--GCAGGAGATGGAG----------CCATGTTAGTACAGGTGAAC-----TGAGTGCACAA-------AC------------CAAAAAGAAAAAATT----------GTCTAGCTAGC-AATTGTT-TAT-AAA--TCT--ACAGA----------------TAAAGGGGGTCGAG-AAATATTTC--AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTC----AATTATTGAAACC-ATA---GGAGC-ATG-T-A-------ATATTTCATATACAAAT-C-----TAA-GAATA-AAGC-A-AATATTT-TGA--TT-TTATACCTAGCCT---A-------A------TAGGTA-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGAAT-ATGC-GTGCCTGACATAGCCT-AAAATGTTAAATTT-AATATTGACCCT
gi|1 : gcATAAATGAGACATCTATAATAACATG-------TTTACAAA--TGTGCTCAAAAGTTA-AATGC-GATCATGGTTAACTATGGAAAA-GGTGAAAATATAATCAA--ATTTG-CTATTTTTCTAGAAATGG--GTAGCTTT---TGCACAAAA-ACTCAAAA-CAGCAAATGGGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TA-TTTAATCTA-GGAGGAAAAAATTTTA-ATAATGGAC-AATTT-GAAGTGATTTTTATAAATCTC-CAA-TAAATCTGTAAAGTT-GT-TTTAAAGTTCAATTGAGA------GTTTTAAATGTCTT-TAAT-AACTTTT--A-T-TCCATCTTACC------------TTCC--AAAAA---TA-GCAATGC-TTTTAAAACAAGTCAATGATATTTTTATATCAATCT--AAATA-----AAACTCTTGGGAATCT-GCCTATTTAAACGCAATTTTCC--GGGGC-TGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTT-TTCCCTTTGGTAACTGCTTCAACGTAAT---TAGGTAAGTAAAGGTTACATA-GACAACACAAACAGT------------------TCACAACTGGT-GAATTTAGAATATGTGTACTCGCTTGAA-ACATGTGGCCCTT-C-AAAATACCT----CTCTATTCA-C-CATTCGAACAAAACAACGGTGTGG-----------AGAATGCCCAGGT--AAGACGTTT--GCAGGAGATGGAG----------CCATGTTAGTACAGGTGAACTGAG----GTGCACAA-------AC------------AAAAAGAAAAAAATT----------GTCTAGCTAGCTAA---TTGTTTTAAATCTATCTACAGA----------------TAAAGGGGGTCGAGAAAATATTTC--AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTCA---AATTATTGAAACCTATAG--GGAGCAATGTT-A-------ATATTTCATATACAAAT-C-----TAA-GAATA-AAGCAA-AATATTT-TGA--TT-TTATACCTA---------------AGCCTAATAGGTA-GTTGGTTT--GGAAACCCGATATCCC-CCTATATGAATCATGC-GTGCCTGACATAGCCT-AAAATG------TTAAATATTAAtaagattttgtaagctttatctattacaaatatatcagtacattgaattcatattatattgtaaaaatgatagtaataatgccccccacccaccccccttttcatgcttgtaaactttgtgttttttttttgtgaaatacaccacagtaataatgtatttcatagaattatacaatgtacattaaatgatgaaatttctctgtcatactttgtaacaaattactattcgccgatgatcacttcatgtcagtgcatgctaaattgacactgtgccggttgatcattagcaacgtcaatatggaaggacccattgcatcacatctttatacttgtctttggct
gi|18 : GAATGAGACATCTATA-TAACATG-------TTTTCATAAATGTGCTCAAAAGtataatgtttgataagctttatctatacaaatatatcagtaattgaagttcagtattcacttcattgtaaaaatgatagtataatgaaccccccacccacccccctttcatgcttgtaaaacttgtagtgtaattttgttttgatttgaaatagaccacaagtaataatgatttcatagcattatacaaagtacttaaatgatgaatttctctgtcatacaactttgttacaaattaatatattggcgctcatgatagatcattcatcctcatgtcagtgcatgctaaattgacactgtgccggtttgtattagacgtccaatatggaagacccattgcatcacatcttgtactcgatatttatatactttgggcctaatatacgcacttctgatctaatgtcttttgtaaattcgcaatcaattatttgtatccatataaaatccaacattcaaattacttttgatgatacttgaaaaatattttgtgactaatttgaataagattagaattaaaaatattgagtacgcgcctgacttaaaaatggacatggaaattataccggtgtaaccttcatttatatactgtaagtcataagcagatttaagagggaggtccaatgagcccc
gi|10 : cTCAATA-TAATAAACTACTGTTTTTCAAAAATGTGCTCAAAAGTTAGAATGCTGGTCATTGTTC-TTAATGAAACAGGTGAAA-TATCATCAATTGTTTGCTTATTTTCCGAGAA-TTAAGGTAGTTATAACCACA-AAAA-CT-CAAAAACAACTAATTA-TTAATTATGTTAAAATTGTATTTTTCATATC-AAATAATCAAATAG-ATCCTACCATTTT-ATTTA-AGAGGAAAAT--GTCA-ATAATGGACAAA-TT-GAAGTAATTTTTAAAA---TT-CAA-TATATCTG
gi|8 : TGCTGATCACTGTTG-GTATGGAAACTGGTCAAA-TATTATCAA--AGTTGGCTATTTTCCAGAAT-TCA--GTAGTTTT---TGCA-CAAATATTCAAAG-CAACAAATTA-TTGATTGTTTTAAAATTGTATTTTTCATTTC-TAATGATAAAATAA-ATCCTA-TATTTTAATTCG-AGAGGAAAA---TTCA-ATAATGGACAA-TTT-GAAGGGATTTTTATAA---TT-CAA-TAAGTCTGTGAAGTT-GTGTTTAAA-TCCAAT---GA------TTTTT--AAGTC-T-TAAT-AGCCTTT--A-T-TCCATC--AAC------------CTCTCAAAAAA---TA------GTTTTTTAAAACAAGTAATTTATGTTTTTC-ATAAAT-T-AAAAAAAACCCAAACTTTTGGGAATCT-GCCTATTT-A
gi|14 : TGCTGGGCATGGTTA-CTATGGAAACAGGTGAAA-TATCATCAA--ATTTGGGTATTTTCCAGAAA-TGG--GTGATTTT---TGCACAAAA-AC-TCACA-CAACAAATTA-TTAATTGTCTTAATATTGTATTTTT
gi|12 : TCATATCCAAATGATAACATATGATCCTAATCTTTTGATTTAAGGAGGAAAAA--ATTATATAATGGACCTATTTTGAAGTAATTTTCATAA---TTGCAAATAAATCTGTGAAGTTTGTGTTTAAA-TCCAAT---CAATTTTTTTTTT--GTGTC-AATAATCAACTTTTTAA-T-TCTATC--CACAGCCCCGCCCCCCCCCAAAAAAAAAATAAGCAGTGCTTTTTAAAACAACT
gi|19 : -TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATTTAC-AATTT-GAAtt
gi|7 : AA---AT-CAG-AAAGTC---AAAGTT-AT---TGA--TTAAAT---GA------CTTTT--ATGTC-T-CAAT-AACTTTT--A-TTCCCATC--CAC------------CTCCAAACA-----TG-GGAGTGTTTTTTAAAACAACTGATTTATGTTTTTA-ATAAATCT-AAAATA-----AAACTTTTTGGCATCT-GCCTATTT-AACGCAATT---TCAGGGGCATGTTTTATGGGGGGAAAGGCGTTTTTTTTAAC-AAGCAGTTATTCCCCTTTGAAACT-CTTCAACGTTAT---AAGGT-AGTGAA-GTTACATA-GAA-ACACAAATAATATGGCGGGATGAT--ATCTCACAACTGGTGGAATTTAGAAGAT-TGAACTCGCTTGAAAGCATAAGGAGCTC-A-AAACTTCCC----AACTAGTCA-C-C---C----AAAGAAA--GTGTGAAG---------GGCATG-TCA
gi|4 : AAT---GA------TTTTT--ATGTC-T-TAAT-CACTTTT--A-TTCCCATC--CAC------------CTCCAAAAAAA---TA-GCAGTGCTTTTTGAAACAACTAATTGATGTTTTTA-TTCAATATAAAAATA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATAGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATTTATAGGT-AGTAAA-GTTGCATA-GCT-ACACAAATAATATGGCGGGATGA--GGTCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTTC-CAAAAATACCT----CTCTATTCACC-CATTAGAAGAAAGGAA--GTGTGA-----------GGAATG-TCTGGTCCAAGACGTTT--GCTGGAGATAGAG----------CCATGTTAGTACAGGTG-ACTGAGGTGAGTGTACAG-------CCAAAAAAGAAAAAGAAAA---------T----------ATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAG-AAATGTTTTC-AACTGAAATGACTTCCA-TCCCATGCATTTTAAAAAGGTTCAATTAATTATTGAAACC-ATA---GGGGC-ACG-T-A-------AT-------------AT-C-----TAA-GCATATAAGT-A-TATATTT-TAA--TT-TTCTACCTAGCCCAATACTGCAATAGCC-ATTAcggaataccaggccc
gi|5 : -AACGCAATT---TGAGGGCCATGCTTTATAT-GGGAAAAGC--AGTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CCACACCGTCAT---AAGGT-AGTAAA-GTTACATACGA--ACACAAATAATATGGCGGGATGA-TG-TCTTACAACTGGCGGATTTTAGAAGAT-TTTACTCGCTTAAAGACATTTCGCATTC-A-AAAATACCTCTCCCTCCAGTCA-CTCATTCAAACAAATAAA--GTGCGAGGGCATATTACGGAATG-CCAGATCCAAGACGTTT--GCTGGACAAAGAG----------------TAA-AC----G-A-----GTGAGTGTAGAA-------CC------------CAAAA---------TGAAAAAAAAAATCTGACTAGC-AA---TT-TATTGAA--TA---ACATGTTAATAAACCTACAGTTAAAGCAGGTCGAG-AAATGTTTTC-AGTGGAAGCGGGTTCCA-ACCCATGTATTTTC-AAGGGTTC----AATTATTGAAACA-ATA---GGAGC-ACG-T-GCTGTTTCAT-------------ATACAAATATAA-GCATA-AAGC-A-AACATTC-TGA--TT-TTCAACCTAGCCC---A-------ATCT-AT---GTG-GTTGG-TT--T--ATCCCGATATCCC-CC-Actggnnnnnnnnnnnnnnnnnnnnnnnnnaaattagtgcgttggattgaacccgacatcccatcatatatatatgccgtgtctgacatagccaaacaatgttaatattgaccttaagatttataaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|16 : TCCAAGACG-TTTTGCTGGAGATAGAGCAAACTTTATCCATGTTAGTTCAGGTG-AGTGTAAAAAATATAAAAAAAAATCCC------------CAAAA--------------------ATCTAGCTAG
gi|6 : atgtgcaacataATAATTGAAAAA-AAATGGGGAGC-ACG-TTA-------ATGTTCACTATACACAT-C-----TAAAGCATA-AATC-ACAATACTTCTAAAGTTATTCTACCT---------------TAGCC-AGTAGGTG-GTTGGTTTCGG--GACCCGATATCCC--C-ATATG
gi|4 : -ATTAG-TGCGTTGGATT--G--AACCCGACATCCCATC-ATATATAT-ATGCCGTGTCTGACATAGCCAAACAATG------TT-AATATTGACCTTA----ctgcctgaacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaattgttaaaaataataacatgtagtataaatggaacccaccacccccctcaatgattgtaaacatgagttattttttatttttttttcgaaatacatcatagtaaaatgttttcatagacattctagacaatatgtcacattatctgaatctgaatttgttgtctttcgatacactactcttgtatacaaaattagtcaatcgttgtcactcagctagtc
gi|3 : aatgatttttatgtcttaatcacttttattcccatccacctccaaaaaaatagcagtgctttttgaaacaactaattgatgtttttattcaatataaaaataaaacttttgggaatctgcctatttaacgcaattcgaggggcatgatttatagagggaaaggctttttttaaccaagagttattcccctttgaaactcttcaacgtcatttataggtagtaaagttgcatagctacacaaataatatggcgggatgaggtctcacaactggtggaatttagaagattgtactcgattgaagacatgtggcgttccaaaaatacctctctattcacccattagaagaaaggaagtgtgaggaatgtctggtccaagacgtttgctggagatagagccatgttagtacaggtgactgaggtgagtgtacagccaaaaaagaaaaagaaaatatctagctagcaatttatcgaataacatgtttaaagcgggtcgagaaatgttttcaactgaaatgacttccatcccatgcattttaaaaaggttcaattaattattgaaaccataggggcacgtaatatctaagcatataagtatatattttaattttctacctagcccaatactgcaatagccattactggnnnnnnnnnnnnnnnnnnnnnnnnnaaATA------TT-A-TATTG----TA-----AAAATGATAG-----TA-----ATAA-TG---CCCCC-----CACCCACCCCCCTTTTCATGCT---------------TG---TAAA-CTT----------TGTGTTTTTTTT--TTGTGAAATACA-CCACA-GTAATAATGTATTTCATAGA-AT--TATACAATGT---ACATTAAA--TGA---TGAAATTTCTCTGTCATAC-T----TTGT-AACAAATTAC---TAT-T-CGCCGATGATCA----------CTT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT---G-CCGGTTGATCATTA---G---CA--AC-GTCAATATGGAAGGACCCA-TTGCATCA----------CATC--------------TTTATACTTGTC------TTTGGagatttataaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|1 : gcataaatgagacatctatataacatgtttacaaaaatgtgctcaaaagttaaatgctgatcatggttactatggaaacaggtgaaatataatcaaatttggctattttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatattttaatctaggaggaaaaatttaataatggacaatttgaagtgatttttataattcaataaatctgtaaagttgtgtttaaattcaatgagttttatgtcttaataacttttattcccatctaccttccaaaaaatagcaatgctttttaaaacaagtcattgatatttttaatcaatctaaaataaaactcttgggaatctgcctatttaacgcaattcgaggggcatgatttatggatggaaaggcttttttcatcaagagtttttcccctttggtactcttcaacgtaattaggtagtaaagttacatagaaacacaaacatgtctcacaactggtggaatttagaatattgtactcgcttgaagacatgtggccttcaaaaaatacctctctattcacccattcgaacaaaacaagtgtgaggaatgccaggtccaagacgtttgcaggagatggagccatgttagtacaggtgaactgagtgcacaaaccaaaaagaaaaaattgtctagctagcaattgtttataaatctacagataaagggggtcgagaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaattattgaaaccataggagcatgtaatatttcatatacaaatctaagaataaagcaaatattttgattttatacctagcctaataggtagttggtttgaacccgatatcccccatatgaatatgcgtgcctgacatagcctaaaatgttaaatttaatattgacccttaagattttgtaagctttatctattacaaatatatcagtacattgaattc------TC-AGTATTCACTTCATTGTAAAAATGATAG-----------TATAA-TGAACCCCCCACCCAC------CCCCCTTTCATG-CT---------------TG---TAAAACTTGTAGTGTAATTTTGTTTTGATT--T---GAAATAGA-CCACAAGTAATAATGA-TTTCATAG-CAT--TATACAAAGT---AC-TT--AAATGA---TG-AATTTCTCTGTCATA--CAACTTTGTTA-CAAATTA-ATATATTGGCGCTCATGA-TAGATCATTCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT---GCCGGTTTG--TATTAGACG---T-------CCAATATGGAAGAC-CCA-TTGCATCA----------CATCTTGTACTCGATATTTATATA-----C------TTTGGGCC-------------TAATATACGCACT-----TCTGA---------------TC-TAATGTCTTTTGT-AAATTCGCAAT-CAATT---------ATTTGT---ATCCATATAAAATCCAACATTCA-----AAT-TACTTT--TGATG--ATACTTGAAAAATATTTTG-TGACTAATTTGAATAAGAT-TAGAATTA-AAAATATTGAG--TACGCGCCTGACTTAAAAAct
gi|6 : ataaatgagacatctataataacatgtttacaaatgtgctcaaaagttaaatgcgatcatggttaactatggaaaaggtgaaaatataatcaaatttgctatttttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatgggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatatttaatctaggaggaaaaaattttaataatggacaatttgaagtgatttttataaatctccaataaatctgtaaagttgttttaaagttcaattgagagttttaaatgtctttaataacttttattccatcttaccttccaaaaatagcaatgcttttaaaacaagtcaatgatatttttatatcaatctaaataaaactcttgggaatctgcctatttaaacgcaattttccggggctgatttatggatggaaaggcttttttcatcaagagttttccctttggtaactgcttcaacgtaattaggtaagtaaaggttacatagacaacacaaacagttcacaactggtgaatttagaatatgtgtactcgcttgaaacatgtggcccttcaaaatacctctctattcaccattcgaacaaaacaacggtgtggagaatgcccaggtaagacgtttgcaggagatggagccatgttagtacaggtgaactgaggtgcacaaacaaaaagaaaaaaattgtctagctagctaattgttttaaatctatctacagataaagggggtcgagaaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaaattattgaaacctatagggagcaatgttaatatttcatatacaaatctaagaataaagcaaaatattttgattttatacctaagcctaataggtagttggtttggaaacccgatatccccctatatgaatcatgcgtgcctgacatagcctaaaatgttaaatattaatataatgtttgataagctttatctatacaaatatatcagtaattgaagtATTG---TTA-----AAAATAATA-ACATGTA---GTATAAATGGAACCCAC-----CA-----CCCCC--------CTCAATGATTGTAAACATGAGTTA---TTT----------TTTATTTTTTTT--TC--GAAATACA-TCATA-GTAA-AATGT-TTTCATAGACATTCTAGACAATATGTCACATT--ATCTGAATCTG-AATTT-GTTGTCtggacatggaaattataccggtgtaaccttcatttatatactgtaagtcataagcagatttaagagggaggtccaatgagcccc
gi|15 : ataattgaaaaaaaatggggagcacgttaatgttcactatacacatctaaagcataaatcacaatacttctaaagttattctaccttagccagtaggtggttggtttcgggacccgatatccccatatgctgcctgaacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaTTTATTTCTT---GAAATACATTCACAAGTAA-AATG--GTTCATAGACAT--TAGACAATGT---ACATT--A--TGA---TT-AATTTGTCTGTCATA--G----TTGTATACAAATTAtttcgatacactactcttgtatacaaaattagtcaatcgttgtcactcagctagtc
gi|11 : taaacatgttattaattatttaACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTCATATAG----TTGTAAACAA--TACAGATGT-G-CACTCATGACTA------CCATCCTACATGTCAGACTGCATAGCTAAATATGACATCTGCTCGGAC-GCTTGA-TATTACATGAGATATGACTGTCAAAAT-GAAGAAACCAATTCCATCAGTCTCTCCCCCATCTC-TGCTCGATATTTTTATACTTGTCTTTCAGTTTGGGCC-------------TAATATATGCACTCTGAGTCTG
gi|9 : AATAGATG-ACTCTGAGTCTGAAATTGAGATACCGTGTT-TAATGTCTTTTGTGAAATTCGCAATCC-ATTATAACACAAATATGT--------TT-AAAATC---CATTT-TTTATAAGATACTTTAGTT-TGATATACTTGAAA---A-TTTGTTGACTAATT--AATTTGAAGGAGAATT--ATAATACTGAGATTACG---CTGG-CAATAAAAAAACCAAAACCAGCAAAC-ACAAAATA-CATA-ATGGAAAT---ACCCGAGTGTAGGTCTTC-TTTATACAAT-GTACAAAGTCATAGAGCAG-TTT-AGAGGGAGGGCCTGCCCCAGGAGGCCC
gi|17 : TCTGAAATTGAGATA-CAT-GTATTATGTC-TTTGT-AAATTTGCAAT-T-ATTA
gi|13 : atatgcgtac-ATCATA----AAAAC-GTGAAAT-CCTA-AAAATCAAACGTTTAGTTCT--T-TACTGT--TGATG--ATACTTGAAAAATA-TATC-TGACTAATTTGAAT-TGAA-CAG-ATTGAAAAATACTACA--TACA---CTGGCTAAAAAAA
gi|1 : ACATGGAAATTATACCG--GTGTA-ACCTTCATTTATATACTG---T-AAGTCATAA-GCAGATTTAAGAGG--GAG---GTCCAATGAGCCCC
Alignments
lowQualScore : 222222 1 1 111 111 111111 1 222222222222 11111 11111 111 11 111 44444 1111 5555555555555 2222222222222 222222222 111 666666666666666666666666666 111 3333 111 1 2222222 1 4444444444444 11111 1 1 111111 222222222 55555555555555555 1 11 22 88888888888888888888888888888888888888888888888888 1111 2 11 111 22 111 11111 444444444 22222 2222 222222 1 11 1 1 1 5555555555 111 666666666666666 111 1 4444444444 111 222222 7777777777777 33333 1 1 1 2222 444444444444 1 222 3333 1 2222 1 1 222 11 22 11 111 2 2 222 222 111 22222 11 11
lowQualScore : 8 333333 99 0 0 6 6 1 99 5 6 99 6 6 6 3 6 6 1 0 5 77 5 77 5 000 5 5 6 6 6 000 666666 77 5 5 5 77 7 77 999999999999 5 22222 5 0 1 1 6 6 6 66666 6 6 111 1 99 11 6 3 6 1 111 6 6 1 6 1 3 00000 6 1 1 6 6 4444 6 1 99 0000000000000 6 6 7 7 2 2 1 6666666666666 333333333 8 444 8 6 111111111111111111111111111 8 777 1 8 1 0 1 8888 6 111 6 6 3 1111111 3 6 3 6 6 6 99 6 2 4444444444444 2 5 1 6 66666 7777 6 8 8 0 0 999999 1 000000000 6 66666666666666666 3 5 55 33 3 55555555555555555555555555555555555555555555555555 1 7777 8 11 0 99 0 0 11 1 111 77 111 6 66666 666666666 7 6 66666 0000 6 888888 3 0 33 0 0 0 1111111111 1 666 555555555555555 4 2 444 0 3333333333 333 0 2 888888 3333333333333 3 5 3 11111 3 5 0 6 0 1111 44 333333333333 0 000 2 0000 0 1111 2 3 0 0 33 777 11 3 99 33 777 7 55 55 2 0 4 0 6 111 333 999 7 1 77777 44 7 44 7777 1 1 1
lowQualScore : . ...... .. . . . . . .. . . .. . . . . . . . . . .. . .. . ... . . . . . ... ...... .. . . . .. . .. ............ . ..... . . . . . . . ..... . . ... . .. .. . . . . ... . . . . . . ..... . . . . . .... . . .. ............. . . . . . . . ............. ......... . ... . . ........................... . ... . . . . . .... . ... . . . ....... . . . . . . .. . . ............. . . . . ..... .... . . . . . ...... . ......... . ................. . . .. .. . .................................................. . .... . .. . .. . . .. . ... .. ... . ..... ......... . . ..... .... . ...... . . .. . . . .......... . ... ............... . . ... . .......... ... . . ...... ............. . . . ..... . . . . . .... .. ............ . ... . .... . .... . . . . .. ... .. . .. .. ... . .. .. . . . . . ... ... ... . . ..... .. . .. .... . . .
lowQualScore : 0 000000 00 8 0 7 7 0 22 2 7 22 7 7 7 0 7 7 4 1 7 99 7 99 7 000 7 7 7 7 7 000 444444 99 7 7 7 99 1 44 333333333333 7 99999 7 4 0 0 7 7 7 77777 7 7 777 7 22 00 7 5 7 0 777 7 7 0 7 7 2 00000 7 0 0 7 7 2222 7 0 22 0000000000000 7 7 3 3 5 5 0 3333333333333 222222222 0 000 0 4 000000000000000000000000000 0 666 8 0 0 8 0 6666 7 777 7 7 3 5555555 0 7 3 7 7 7 22 7 5 7777777777777 5 7 6 7 77777 0000 2 0 0 0 0 222222 7 888888888 7 00000000000000000 2 5 88 88 2 44444444444444444444444444444444444444444444444444 0 4444 0 66 4 00 8 8 00 0 777 55 777 7 77777 333333333 3 7 22222 0000 5 888888 2 0 88 0 0 0 0000000000 0 555 222222222222222 0 5 000 0 8888888888 555 2 5 888888 3333333333333 2 6 2 00000 2 5 0 0 8 2222 22 888888888888 0 222 0 0000 0 2222 5 2 0 0 55 555 00 2 00 88 555 0 00 00 5 0 0 0 7 777 000 333 3 0 33333 00 3 77 7777 0 0 0
consensus : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTTA-CTATGGAAACAGGTGAAA-TATNATCAA--ATTTGGCTATTTTCC-AGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAATTA-TTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTTA--TGTCT-T-AAT-AACTTTT--ATTCCCATCC-AC------------CT-CCAAAAAAA---TA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTTAA-CGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCAT---TAGGTA-GTAAAG-TTACATAGANA-CACAAATAATATGGCGGGATGAT-G-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATGCC-AGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAANCCA-----AA---A--AAAAAATT-------ATCTAGCTAGC-AA---TT-TATCGAAT--AT--ACATGT--------------TTAAAGCGGGTCGAGAAA-TGTTTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GG-AGCA-CGT-AATGTTTCA-TATACAAATCTAA-GCATA-AAGCA-AA-TATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TTAATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNACCCCA-CCACCC-----CC--TT---TCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTTCG--AAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATTA--TGA---TGAA-TTTCTCTGTC-----ATAC-G------TTGTAAAC-AAATTA--CAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTAC-----ACGTA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAAT-CAAGCATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAATAT-GAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCTAAAAAAAAAANNAAAANNAGNAAACAACAAAANACCATACATGGAAAT-ATACCCG-GTGTAGGTCTTCATTTATACACTG-TAC-AAGTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
Reference ( family-5052 ) : ATAAATGAGACATCTATA-TAACA------TGTTTN-CAAAAATGTGCTCAAAAGTTA-AATGCTGATCATGGTTA-CTATGGAAACAGGTGAAA-TATNATCAA--ATTTGGCTATTTTCC-AGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAATTA-TTAATTGTCTTAAAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTTA--TGTCT-T-AAT-AACTTTT--AT-CCCATCC-AC------------CT-CCAAAAAAA---TA-GCAGTGCTTTTTAAAACAANTNATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTTAA-CGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTNAT---TAGGTA-GTAAAG-TTACATAGANA-CACAAATAATATGGCGGGATGA--G-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGNAA--GTGTG-AG----------GGAATGCC-AGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAACCCA-----AA---A--AAAAAATT-------ATCTAGCTAGC-AA---TT-TATCGAAT--AT--ACANGT--------------TTAAAGCGGGTCGAGAAA-TGTTTCC-AATGGAAGTGGTTTCCA-TNCCATGCATTTTTAAAANGTTCA---AATTATTGAAACC-ATA---GG-AGCA-CGT-AATATTTCA-TATACAAATCTAA-GCATA-AAGCA-AA-TATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGAAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TTAATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGGACCCC--CCACCC-----CC--TT---TC---CTTGTAAA-C---------TT----------TTTGTTTTNTTTTCG--AAATACAC-CACAAGTAATAATGT-TTTCATAGACAT--TANACAATGT---ACATTA--TGA---TGAA-TTTCTCTGTC-----ATAC-G------TTGTAAAC-AAATTA--CA-ATAT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTA------ACGTA-AC-GTCAATATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAAT-CAA-CGTTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAAT-T-GAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCTAAAAAAAAAACCAAAACCAGCAAAC-ACAAAATA-CATACATGGAAATTATACCNGAGTGTAGGCCTTCATTTATACANTGGTACAAAGTCATAGAGCAGATTTAAGAGGGAGGGCCTGCCCNANGAGNCCC
gi|1 : ATAAATGAGACATCTATAATAACA------TGTTTA-CAAA--TGTGCTCAAAAGTTA-AATGC-GATCATGGTTAACTATGGAAA-AGGTGAAAATATAATCAA--ATTTG-CTATTTTTCTAGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAATGGGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TATTT-AATCTA-GGAGGAAAAAATTTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAAATCTC-CAA-TAAATCTGTAAAGTT-GT-TTTAAAGTTCAATTGAGA------GTTTTAAATGTCT-TTAAT-AACTTTT--AT-TCCATCTTAC------------CTTCCAAAAA-----TA-GCAATGCTTTT-AAAACAAGTCAATGATATTTTTATATCAATCTAAA--TA-----AAACTCTTGGGAATCT-GCCTATTTAAACGCAATTTTCCG--GGGC-TGATTTATGGATGGAAAGGC--TTTTTTCA-TCAAG-AGTT-TTCCCTTTGGTAACTGCTTCAACGTAAT---TAGGTAAGTAAAGGTTACATAGACAACACAAACAGT------------------TCACAACTGGTG-AATTTAGAATATGTGTACTCGCTTGAA-ACATGTGGCCCT-T-CAAAATACCT----CTCTATTCACC-ATTCGAACAAAACAACGGTGTG--G----------AGAATGCCCAGGT--AAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAACTGAGGTG----CACAAACAA-----AA---AGAAAAAAATT-------GTCTAGCTAGCTAA---TTGTTTTAAATCTATCTACAGAT----------------AAAGGGGGTCGAGAAAATATTTC--AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTCA---AATTATTGAAACCTATA---GGGAGCAATGTTAATATTTCA-TATACAAATCTAA-GAATA-AAGCA-AAATATTT-TGA--TT-TTATACCTA----------------AGCCTAATAGGTA-GTTGGTTT--GGAAACCCGATATCCC-CCTATATGAATCATGC-GTGCCTGACATAGCCT-AA-AATG------TTAA
gi|1 : ------TCAGTATTCACTTCATTGTA-AAAATGATA-------G---------TATA--ATGAACCCC--CCACCCACCCCCC--TT---TCATGCTTGTAAAAC---------TTGTAGTGTAATTTTGTTTTGATTT-G--AAATAGAC-CACAAGTAATAATGA-TTTCATAG-CAT--TATACAAAGT---AC-TTAAATGA---TGAA-TTTCTCTGTC-----ATAC-AACT---TTGTTA-C-AAATTA--AT-ATATTGG-CGCTCATGA-TAGATCATTCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----G-CCGGTTTG-T-ATTAG-----ACGT------CCAATATGGAAGAC-CC-ATTGCATCA----------CATCTTGTACTCGATATTTATATA-----C------TTTGGGCC-------------TAATATACGCACT-----TCTGA----------------TCTAATGTCTTTTGT-AAATTCGCAATCAATT---------ATTTGT---ATC-CATATAAAATCCAA-CATTCA-----AAT-TACTTT----TGATGATACTTGAAAAATATTTTGT-GACTAATTTGAATAA-GATT-AGAATTA-AAAATATTGAG--TACGCGCCTGACTTAAAAAatattaatataatgtttgataagctttatctatacaaatatatcagtaattgaagttcagtattcacttcattgtaaaaatgatagtataatgaaccccccacccacccccctttcatgcttgtaaaacttgtagtgtaattttgttttgatttgaaatagaccacaagtaataatgatttcatagcattatacaaagtacttaaatgatgaatttctctgtcatacaactttgttacaaattaatatattggcgctcatgatagatcattcatcctcatgtcagtgcatgctaaattgacactgtgccggtttgtattagacgtccaatatggaagacccattgcatcacatcttgtactcgatatttatatactttgggcctaatatacgcacttctgatctaatgtcttttgtaaattcgcaatcaattatttgtatccatataaaatccaacattcaaattacttttgatgatacttgaaaaatattttgtgactaatttgaataagattagaattaaaaatattgagtacgcgcctgacttaaaaatggacatggaaattataccggtgtaaccttcatttatatactgtaagtcataagcagatttaagagggaggtccaatgagcccc
gi|1 : ataaatgagacatctataataacatgtttacaaatgtgctcaaaagttaaatgcgatcatggttaactatggaaaaggtgaaaatataatcaaatttgctatttttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatgggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatatttaatctaggaggaaaaaattttaataatggacaatttgaagtgatttttataaatctccaataaatctgtaaagttgttttaaagttcaattgagagttttaaatgtctttaataacttttattccatcttaccttccaaaaatagcaatgcttttaaaacaagtcaatgatatttttatatcaatctaaataaaactcttgggaatctgcctatttaaacgcaattttccggggctgatttatggatggaaaggcttttttcatcaagagttttccctttggtaactgcttcaacgtaattaggtaagtaaaggttacatagacaacacaaacagttcacaactggtgaatttagaatatgtgtactcgcttgaaacatgtggcccttcaaaatacctctctattcaccattcgaacaaaacaacggtgtggagaatgcccaggtaagacgtttgcaggagatggagccatgttagtacaggtgaactgaggtgcacaaacaaaaagaaaaaaattgtctagctagctaattgttttaaatctatctacagataaagggggtcgagaaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaaattattgaaacctatagggagcaatgttaatatttcatatacaaatctaagaataaagcaaaatattttgattttatacctaagcctaataggtagttggtttggaaacccgatatccccctatatgaatcatgcgtgcctgacatagcctaaaatgttaaatattaatataatgtttgataagctttatctatacaaatatatcagtaattgaagtACATGGAAATTATACCGG--TGTAA-CCTTCATTTATATACTG-TA---AGTCATA-AGCAGATTTAAGAGGGAG-----GTCCAATGAGCCCCtggacatggaaattataccggtgtaaccttcatttatatactgtaagtcataagcagatttaagagggaggtccaatgagcccc
gi|10 : ataaatgagacatctataataacatgtttacaaatgtgctcaaaagttaaatgcgatcatggttaactatggaaaaggtgaaaatataatcaaatttgctatttttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatgggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatatttaatctaggaggaaaaaattttaataatggacaatttgaagtgatttttataaatctccaataaatctgtaaagttgttttaaagttcaattgagagttttaaatgtctttaataacttttattccatcttaccttccaaaaatagcaatgcttttaaaacaagtcaatgatatttttatatcaatctaaataaaactcttgggaatctgcctatttaaacgcaattttccggggctgatttatggatggaaaggcttttttcatcaagagttttccctttggtaactgcttcaacgtaattaggtaagtaaaggttacatagacaacacaaacagttcacaactggtgaatttagaatatgtgtactcgcttgaaacatgtggcccttcaaaatacctctctattcaccattcgaacaaaacaacggtgtggagaatgcccaggtaagacgtttgcaggagatggagccatgttagtacaggtgaactgaggtgcacaaacaaaaagaaaaaaattgtctagctagctaattgttttaaatctatctacagataaagggggtcgagaaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaaattattgaaacctatagggagcaatgttaatatttcatatacaaatctaagaataaagcaaaatattttgattttatacctaagcctaataggtagttggtttggaaacccgatatccccctatatgaatcatgcgtgcctgacatagcctaaaatgttaaatattaatataatgtttgataagctttatctatacaaatatatcagtaattgaagttcagtattcacttcattgtaaaaatgatagtataatgaaccccccacccacccccctttcatgcttgtaaaacttgtagtgtaattttgttttgatttgaaatagaccacaagtaataatgatttcatagcattatacaaagtacttaaatgatgaatttctctgtcatacaactttgttacaaattaatatattggcgctcatgatagatcattcatcctcatgtcagtgcatgctaaattgacactgtgccggtttgtattagacgtccaatatggaagacccattgcatcacatcttgtactcgatatttatatactttgggcctaatatacgcacttctgatctaatgtcttttgtaaattcgcaatcaattatttgtatccatataaaatccaacattcaaattacttttgatgatacttgaaaaatattttgtgactaatttgaataagattagaattaaaaatattgagtacgcgcctgacttaaaaatggTCAATA-TAATAAACTACTGTTTTTCAAAAATGTGCTCAAAAGTTAGAATGCTGGTCATTGTTC-TTAATGAAACAGGTGAAA-TATCATCAATTGTTTGCTTATTTTCC-GAGAATTAAGGTAGTTATAACCACAAAAACTCAAAAACAACTAATTA-TTAATTATGTTAAAATTGTATTTTTCATATC-AAATAATCAAATAG-ATCCTACCATTTT-ATTTA-AGAGGAAAAT--GTCA-ATAATGGAC--AA-ATTGAAGTAATTTTTAAAA---TT-CAA-TATATCTG
gi|11 : ACAATGT---ACATTA--TGA---TGAA-TTTCTCTGTC-----ATATAG------TTGTAAAC-AA--TA--CAGATGT--G-CACTCATGACTA------CCATCCTACATGTCAGACTGCATAGCTAAATATGACATCTGCTCGGA-C--GCTTGAT-ATTACATGAGATATG-ACTGTCAAAATGAAGAAA-CCAATTCCATCAGTCTCTCCCCCATCTC-TGCTCGATATTTTTATACTTGTCTTTCAGTTTGGGCC-------------TAATATATGCACTCTGAGTCTG
gi|12 : TCATATCCAAATGATAACATATGATCCTAATCTTTTGATTTAAGGAGGAAAAA--ATTATATAATGGACCTAT-TTTGAAGTAATTTTCATAA---TTGCAAATAAATCTGTGAAGTTTGTGTTTAAA-TCCAAT---CAATTTTTTTTTTG--TGTCAAT-AATCAACTTTTTAAT-TCTATCC-ACAGCCCCGCCCCCCC-CCAAAAAAAAAATAAGCAGTGCTTTTTAAAACAACT
gi|13 : -ATCATAA----AA-ACGTGAAATCCTA---AAAAT-CAAACGTTTAGT--TCTT-TACTGT----TGATGATACTTGAAAAATA-TATCT-GACTAATTTGAAT-T-GAAC-AG-ATTGAAAAATACTACA--TACA---CTGGCTAAAAAAAtt
gi|14 : TGCTGGGCATGGTTA-CTATGGAAACAGGTGAAA-TATCATCAA--ATTTGGGTATTTTCC-AGAAAT--GGGTGATTTTTGC-ACAAAAACTC-ACA-CAACAAATTA-TTAATTGTCTTAATATTGTATTTTT
gi|15 : TTATTAA-T---------TA----------TTTATTTATTTCTTG--AAATACATTCACAAGTAA-AATGG-TT-CATAGACAT--TAGACAATGT---ACATTA--TGA---TTAA-TTTGTCTGTC-----ATA--G------TTGTATAC-AAATTA--
gi|16 : taaacatgTCCAAGACGTTTTGCTGGAGATAGAGCAAACTTTATCCATGTTAGTTCAGGTGAGTGTAAAAAATAT----AA---A--AAAAAATCCCCAAAAATCTAGCTAG
gi|17 : atgtgcaacataATATGCGTACTCTG------AAATTGAGATACATGT-ATT-ATGTC-TTTGT-AAATTTGCAATT-ATTA
gi|18 : AATGAGACATCTATA-TAACA------TGTTTT-CATAAATGTGCTCAAAAG
gi|19 : cg-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATTTAC--AA-TTTGAA
gi|2 : ATGAATGAGACATCTATA-TAACA------AGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTTG-CTATGGAAACCGGTGAAA-TATAATCAA--ATTTGACTATTTTCC-AAGAAT--GAGTAGTTTTTGC-A-AAAAAC-CAAAA-CAACAAATTA-TTAATTGTCTTACAATTGTATTTTTCAAATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTG-ATAATGGAC--AAATTTGAAGTGATTTTCATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TCTTTA--TGTCT-T-AAT-AACTTTT--AT-CCCATCA-AC------------CT-CCAAAAAAA---TA-GCAATGCTTTTTGAAACAACTAATTGATGTATTTA-ATCAATATAAAA-TA-----AAACTTTTGGGAATCTCGCCTATTTAA-CGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCAT---TAGGTA-GTAAAG-TTACATAGATA-CACAAATAATATGGCGGGATGATTGTTCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTT-C-CAAAATACCT----CTCTATTCA-CCATTCGAAGAAAGAAA--GTGTG-A-----------GGAATGTC-AGGTCCAAGACG-TT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTACAACCCA-----AA---A---------T-------ATCTAGCTAGC-AA---TT-TATCGAAT--A---ACATGT--------------TTAAAGCGGGTCGAGAAA-TGTTTTCAAACTGAAGTGGCTTCCATTCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GG-AGCA-CGT-AAT--------------ATCTAA-GCATATAAGCA-AA-TATTT-TGA--TT-TTCTACCTAGCCC---------ACTAGCC-ATTAGGTG-GTTGGATT--G--AACCCGATATCCC-TC-ATATGTAT-ATGG-GTGTCTGCCATAGCCTAAA-AATG------TTAATATTGACCT-----TAGAAAATGATA-------GACTAGTACATGTATAATG--CCCC--CC-CCC-----C---------C---CTTGT--A-C---------TT----------TTTGTTTTATTTT-G--AAATACAT-CACAAGTAA-AATGT-TTTCATAGACAT--TATACAATGT---ACATTA--TGA---TGAA-TTTCACTGTC-----ATA--G------TTGTAAAC-AAATTA--CAGATGT--GACACTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GACA-GGTTG-T-ATTAC-----ATGTATAC-GTCAAAAT-GAAG-A-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCCTACATTTTTTTTGTAATATATGCACTCTGAGTCTGAAATTGAGATAC--AT-TTTAATGTC-TTTGT-AAATTCGCAATC-ATTATAA----AATTTGT---ATCATA---AAAAT-CAAGCATTTATTTATAAT-TACTTT----TTATGATACTTGAAAAATA-TTTGT-GACTAATTTAAATAT-GAAG-AGAATT--AAAATACTGAG--TACG---CTGGCCAAAAAAAAAAAAAAAAAAAAAAAACAACAAAAAACCATACATGGAA---ATACCC--GTGTA-GTCTTCATTTATACACTGGTAC-AAGTCATAG-GCGGATTT-AGAGG--AGGCCTGCCCCAGGAGCCCC
gi|3 : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGATCATGGTTA-CTATGGAAACAGGTGAAA-TATAATCAA--ATTTGGCTATTTTCT-AGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAATGG-TTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATCTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------GTTTTA--TGTCT-T-AAT-AACTTTT--ATTCCCATCT-AC------------CT-TCCAAAAAA---TA-GCAATGCTTTTTAAAACAAGTCATTGATATTTTTA-ATCAATCTAAAA-TA-----AAACTCTTGGGAATCT-GCCTATTTAA-CGCAATT---CGAGGGGCATGATTTATGGATGGAAAGGC--TTTTTTCA-TCAAG-AGTTTTTCCCCTTTGGTACT-CTTCAACGTAAT---TAGGTA-GTAAAG-TTACATAGAAA-CACAAACA-----------TG-----TCTCACAACTGGTGGAATTTAGAATAT-TGTACTCGCTTGAAGACATGTGGCCTT-CAAAAAATACCT----CTCTATTCACCCATTCGAACAAAACAA--GTGTG-A-----------GGAATGCC-AGGTCCAAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAAC-----TGAGTGCACAAACCA-----AA---AAGAAAAAATT-------GTCTAGCTAGC-AATTGTT-TAT-AAAT--CT--ACAGA----------------TAAAGGGGGTCGAGAAA-TATTT-C-AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTC----AATTATTGAAACC-ATA---GG-AGCA-TGT-AATATTTCA-TATACAAATCTAA-GAATA-AAGCA-AA-TATTT-TGA--TT-TTATACCTAGCCT---------A--A------TAGGTA-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGAAT-ATGC-GTGCCTGACATAGCCT-AA-AATGTTAAATTTAATATTGACCC-----TT-AAGATc
gi|3 : gcATA------TTA-TATTG---------TA-AAAATGATA-------G---------TA-ATAATGCCCCCCACCCACCC-----CCCTTT---TCATGCTTGTAAA-C---------TT----------TGTGTTTTTTTTTTGTGAAATACAC-CACA-GTAATAATGTATTTCATAGA-AT--TATACAATGT---ACATTAAATGA---TGAAATTTCTCTGTC-----ATAC-T------TTGTAA-C-AAATTA--C---TAT--T-CGCCGATGATCA------CT----T-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GCC--GGTTGATCATTA--------GCA-AC-GTCAATATGGAAGGACCC-ATTGCATCA----------CATC--------------TTTATACTTGTC------TTTGGtttgtaagctttatctattacaaatatatcagtacattgaattcatattatattgtaaaaatgatagtaataatgccccccacccaccccccttttcatgcttgtaaactttgtgttttttttttgtgaaatacaccacagtaataatgtatttcatagaattatacaatgtacattaaatgatgaaatttctctgtcatactttgtaacaaattactattcgccgatgatcacttcatgtcagtgcatgctaaattgacactgtgccggttgatcattagcaacgtcaatatggaaggacccattgcatcacatctttatacttgtctttggct
gi|4 : gcataaatgagacatctatataacatgtttacaaaaatgtgctcaaaagttaaatgctgatcatggttactatggaaacaggtgaaatataatcaaatttggctattttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatattttaatctaggaggaaaaatttaataatggacaatttgaagtgatttttataattcaataaatctgtaaagttgtgtttaaattcaatgagttttatgtcttaataacttttattcccatctaccttccaaaaaatagcaatgctttttaaaacaagtcattgatatttttaatcaatctaaaataaaactcttgggaatctgcctatttaacgcaattcgaggggcatgatttatggatggaaaggcttttttcatcaagagtttttcccctttggtactcttcaacgtaattaggtagtaaagttacatagaaacacaaacatgtctcacaactggtggaatttagaatattgtactcgcttgaagacatgtggccttcaaaaaatacctctctattcacccattcgaacaaaacaagtgtgaggaatgccaggtccaagacgtttgcaggagatggagccatgttagtacaggtgaactgagtgcacaaaccaaaaagaaaaaattgtctagctagcaattgtttataaatctacagataaagggggtcgagaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaattattgaaaccataggagcatgtaatatttcatatacaaatctaagaataaagcaaatattttgattttatacctagcctaataggtagttggtttgaacccgatatcccccatatgaatatgcgtgcctgacatagcctaaaatgttaaatttaatattgacccttaagattttgtaagctttatctattacaaatatatcagtacattgaattcAAT---GA------TTTTTA--TGTCT-T-AAT-CACTTTT--ATTCCCATCC-AC------------CT-CCAAAAAAA---TA-GCAGTGCTTTTTGAAACAACTAATTGATGTTTTTA-TTCAATATAAAAATA-----AAACTTTTGGGAATCT-GCCTATTTAA-CGCAATT---CGAGGGGCATGATTTATAGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATTTATAGGTA-GTAAAG-TTGCATAGCTA-CACAAATAATATGGCGGGATGAG-G-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTTCC-AAAAATACCT----CTCTATTCACCCATTAGAAGAAAGGAA--GTGTG-A-----------GGAATGTC-TGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTACAGCCAAAAAAGAA---A--AAGAAAAT-------ATCTAGCTAGC-AA---TT-TATCGAAT--A---ACATGT--------------TTAAAGCGGGTCGAGAAA-TGTTTTC-AACTGAAATGACTTCCA-TCCCATGCATTTTAAAAAGGTTCAATTAATTATTGAAACC-ATA---GG-GGCA-CGT-AAT--------------ATCTAA-GCATATAAGTA-TA-TATTT-TAA--TT-TTCTACCTAGCCCAATACTGCAA-TAGCC-ATTAct
gi|4 : -ATTAG-TGCGTTGGATT--G--AACCCGACATCCCATC-ATATATAT-ATGCCGTGTCTGACATAGCCA-AACAATG------TTAATATTGACCT-----TA-AGATTTATA-------ctggnnnnnnnnnnnnnnnnnnnnnnnnnaaattagtgcgttggattgaacccgacatcccatcatatatatatgccgtgtctgacatagccaaacaatgttaatattgaccttaagatttataaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|5 : aatgatttttatgtcttaatcacttttattcccatccacctccaaaaaaatagcagtgctttttgaaacaactaattgatgtttttattcaatataaaaataaaacttttgggaatctgcctatttaacgcaattcgaggggcatgatttatagagggaaaggctttttttaaccaagagttattcccctttgaaactcttcaacgtcatttataggtagtaaagttgcatagctacacaaataatatggcgggatgaggtctcacaactggtggaatttagaagattgtactcgattgaagacatgtggcgttccaaaaatacctctctattcacccattagaagaaaggaagtgtgaggaatgtctggtccaagacgtttgctggagatagagccatgttagtacaggtgactgaggtgagtgtacagccaaaaaagaaaaagaaaatatctagctagcaatttatcgaataacatgtttaaagcgggtcgagaaatgttttcaactgaaatgacttccatcccatgcattttaaaaaggttcaattaattattgaaaccataggggcacgtaatatctaagcatataagtatatattttaattttctacctagcccaatactgcaatagccattactggnnnnnnnnnnnnnnnnnnnnnnnnnaaAA-CGCAATT---TGAGGGCCATGCTTTATAT-GGGAAAAGC--AGTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CCACACCGTCAT---AAGGTA-GTAAAG-TTACATACGAA-CACAAATAATATGGCGGGATGAT-G-TCTTACAACTGGCGGATTTTAGAAGAT-TTTACTCGCTTAAAGACATTTCGCATT-C-AAAAATACCTCTCCCTCCAGTCACTCATTCAAACAAATAAA--GTGCG-AGGGCATATTACGGAATGCC-AGATCCAAGACGTTT-GCTGGACAAAGA---------------GTAAAC-GA-GTGAGTGTAGAACCCA-----AAATGA--AAAAAAAA-------ATCTGACTAGC-AA---TT-TATTGAAT--A---ACATGTTAATAAACCTACAGTTAAAGCAGGTCGAGAAA-TGTTTTC-AGTGGAAGCGGGTTCCA-ACCCATGTATTTTC-AAGGGTTC----AATTATTGAAACA-ATA---GG-AGCA-CGT-GCTGTTTCA-TATACAAATATAA-GCATA-AAGCA-AA-CATTC-TGA--TT-TTCAACCTAGCCC---------A--ATCT-AT---GTG-GTTGGTTT-----ATCCCGATATCCC-CC-Aaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|6 : ATAATTGAAAAA-AAATGGGG-AGCA-CGTTAATGTT-CACTATACACATCTAAAGCATA-AATCACAA-TACTTCTAAAGTTATTCTACCT----------------TAGCC-AGTAGGTG-GTTGGTTTCGG--GACCCGATATCCC-C--------AT-ATGC--TGCCTGA
gi|6 : ATTG---T-----TA-AAAATAATAACATGTAG---------TATA-AATGGAACCCA-CCACCC-----CC--CTCAATG---ATTGTAAA-CATGAGTTATTT----------TTTATTTTTTTTTCG--AAATACAT-CAT-AGTAA-AATGT-TTTCATAGACATTCTAGACAATATGTCACATTATCTGAATCTGAA-TTTGT-TGTCTTTCGATAC-ACTACTCTTGTATACAAAATTAGTCA-ATacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaattgttaaaaataataacatgtagtataaatggaacccaccacccccctcaatgattgtaaacatgagttattttttatttttttttcgaaatacatcatagtaaaatgttttcatagacattctagacaatatgtcacattatctgaatctgaatttgttgtctttcgatacactactcttgtatacaaaattagtcaatcgttgtcactcagctagtc
gi|7 : ataattgaaaaaaaatggggagcacgttaatgttcactatacacatctaaagcataaatcacaatacttctaaagttattctaccttagccagtaggtggttggtttcgggacccgatatccccatatgctgcctgaacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaAA---AT-CAG-AAAGTC---AAAGTT-AT---TGA--TTAAAT---GA------CTTTTA--TGTCT-C-AAT-AACTTTT--ATTCCCATCC-AC------------CT-CCAAACA-----TG-GGAGTGTTTTTTAAAACAACTGATTTATGTTTTTA-ATAAATCTAAAA-TA-----AAACTTTTTGGCATCT-GCCTATTTAA-CGCAATT---TCAGGGGCATGTTTTATGGGGGGAAAGGCGTTTTTTTTAA-CAAGCAGTTATTCCCCTTTGAAACT-CTTCAACGTTAT---AAGGTA-GTGAAG-TTACATAGAAA-CACAAATAATATGGCGGGATGAT-A-TCTCACAACTGGTGGAATTTAGAAGAT-TGAACTCGCTTGAAAGCATAAGGAGCT-C-AAAACTTCCC----AACTAGTCACC--------CAAAGAAA--GTGTGAAG----------GGCATGTC-Acgttgtcactcagctagtc
gi|8 : TGCTGATCACTGTTG-GTATGGAAACTGGTCAAA-TATTATCAA--AGTTGGCTATTTTCC-AGAATT--CAGTAGTTTTTGC-ACAAATATTCAAAG-CAACAAATTA-TTGATTGTTTTAAAATTGTATTTTTCATTTC-TAATGATAAAATAA-ATCCTA-TATTTTAATTCG-AGAGG-AAAA--TTCA-ATAATGGAC--AA-TTTGAAGGGATTTTTATAA---TT-CAA-TAAGTCTGTGAAGTT-GTGTTTAAA-TCCAAT---GA------TTTTTA--AGTCT-T-AAT-AGCCTTT--AT-TCCATCA-AC------------CT-CTCAAAAAA---TA------GTTTTTTAAAACAAGTAATTTATGTTTTTC-ATAAAT-TAAAA-AAAACCCAAACTTTTGGGAATCT-GCCTATTTAcggaataccaggccc
gi|9 : AATAGATG-ACTCTGAGTCTGAAATTGAGATACC-GTGTTTAATGTCTTTTGTGAAATTCGCAATCCATTATAACACAAATATGT---TT-------AAAAT-C---CATTTTTTA-TAAGATACTTTAGTTTGAT-ATACTTGAAAA----TTTGTTGACTAATT--AAT-TTGAAGGAGAATT--ATAATACTGAGATTACG---CTGGC-AATAAAAAAACCAAAACCAGCAAAC-ACAAAATA-CATA-ATGGAAAT---ACCCGAGTGTAGGTCTTC-TTTATACAATG-TACAAAGTCATAGAGCAG-TTTA-GAGGGAGGGCCTGCCCCAGGAGGCCC
Alignments
lowQualScore : 222222 1 1 111 111 111111 1111 1111 33333333 11111 111 111 1111 5555555555555 4444444444444444444444444444 111 11 555555555555555555555555 3333 111 2222222 1 4444444444444 11111 1 1 111111 111111111 55555555555555555 1 1111 2222222222 55555555555555555555555 222 1 2 11 111 11111 111 11111 444444444 2222 3333333 1 11 1 1 1 5555555555 111 111 44444444444 111 1 4444444444 111 222222 7777777777777 33333 1 1 4444444444444444444444444 111 3333 1 2222 1 1 11 22 11 111 1111 3333333333333333 111 222 11 1 1 11 11
lowQualScore : 8 333333 99 0 0 6 6 1 99 6 99 6 6 6 1 6 6 1 0 5 77 5 77 5 000 5 5 6 6 6 000 666666 77 666 5 77 4444 2222 77 5 00000000 5 0 0 1 6 6 6 66666 6 5 111 2 1 99 7 3 6 3 6 1 111 6 6 77 3 9999 6 1 1 6 6 4444 6 1 99 0000000000000 6 6 7 7 55 1 6 3333333333333333333333333333 8 444 8 6 11 888888888888888888888888 0 88 8 1 8 0 1111 6 888 6 6 6 1111111 3 6 3 6 6 6 99 6 2 4444444444444 2 5 1 6 66666 7777 3 8 8 0 0 999999 6 1 888888888 6 66666666666666666 3 5 44 8888 5555555555 0 5 6 55555555555555555555555 1 777 8 0 0 99 0 0 11 0 111 88888 111 6 66666 666666666 3 6 888 0000 6 5555555 0 33 0 0 0 1111111111 1 666 000 00000000000 1 2 444 0 3333333333 333 0 2 888888 3333333333333 3 5 3 11111 3 5 0 8 8 5555555555555555555555555 000 0000 0 1111 2 3 0 0 33 9 11 3 99 33 777 0000 66 22 6666666666666666 6 999 7 666 88 7 3 6 3 44 0 7 44 7777
lowQualScore : . ...... .. . . . . . .. . .. . . . . . . . . . .. . .. . ... . . . . . ... ...... .. ... . .. .... .... .. . ........ . . . . . . . ..... . . ... . . .. . . . . . . ... . . .. . .... . . . . . .... . . .. ............. . . . . .. . . ............................ . ... . . .. ........................ . .. . . . . .... . ... . . . ....... . . . . . . .. . . ............. . . . . ..... .... . . . . . ...... . . ......... . ................. . . .. .... .......... . . . ....................... . ... . . . .. . . .. . ... ..... ... . ..... ......... . . ... .... . ....... . .. . . . .......... . ... ... ........... . . ... . .......... ... . . ...... ............. . . . ..... . . . . . ......................... ... .... . .... . . . . .. . .. . .. .. ... .... .. .. ................ . ... . ... .. . . . . .. . . .. ....
lowQualScore : 0 000000 44 8 0 7 7 0 22 7 22 7 7 7 0 7 7 4 1 7 99 7 99 7 000 7 7 7 7 7 000 444444 99 111 7 99 3333 1111 44 7 44444444 7 4 7 5 7 7 7 77777 7 7 777 5 7 22 3 7 7 5 7 0 777 7 7 77 2 2222 7 0 0 7 7 2222 7 5 22 0000000000000 7 7 3 3 00 0 7 8888888888888888888888888888 0 000 0 4 00 666666666666666666666666 8 88 0 4 0 8 8888 7 333 7 7 7 2222222 0 7 3 7 7 7 22 7 5 7777777777777 5 7 6 7 77777 0000 8 0 0 0 0 222222 7 7 555555555 7 00000000000000000 2 5 00 0000 8888888888 8 0 0 44444444444444444444444 0 444 0 6 4 00 8 8 00 6 777 55555 777 7 77777 333333333 5 7 222 0000 5 2222222 0 88 0 0 0 0000000000 0 555 000 00000000000 0 5 000 0 8888888888 555 2 5 888888 3333333333333 2 6 2 00000 2 5 0 0 0 2222222222222222222222222 555 0000 0 2222 5 2 0 0 55 8 00 2 00 88 555 8888 77 00 0000000000000000 7 777 3 777 77 3 3 7 3 00 7 3 77 7777
consensus : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAAACCA-AA---A--AA-------AAAATT-------ATCTAGCTAGC-AA---TT-TATCGAA--TA--TACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNNCCCCACC-ACCC-----CC--TTTCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTT--CGAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATAC-G------TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-A-TTATAA----AATNTGT---ATC-TA---AAAATCAAACATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATATTT-GT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCTAAAAAAAAAA-NAAAAACGG-AAACA-CAAAA-AC-ATACATGGAAAT-ATACCCG-GTGTAGGTCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
Reference ( family-5052 ) : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-NACACAAATAATATGGCGGGATGA-TG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAANCCA-AA---A--AA-------AAAATT-------ATCTAGCTAGC-AA---TT-TATCGAA--TA--TACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNACCCCACC-ACCC-----CC--TTTCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTT--CGAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATAC-G------TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-A-TTATAA----AATNTGT---ATC-TA---AAAATCAAGCATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATATTT-GT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCTAAAAAAAAAANNAAAANNAGNAAACAACAAAANACCATACATGGAAAT-ATACCCG-GTGTAGGTCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
gi|1 : ATAAATGAGACATCTATAATAACA------TGTTTA-CAAA--TGTGCTCAAAAGTTA-AATGC-GATCATGGTTAACTATGGAAA-AGGTGAAAATATAATCAA--ATTT-GCTATTTTTCTAGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAATGGGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TA-TTTAATCTA-GGAGGAAAAAATTTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAAATCTC-CAA-TAAATCTGTAAAGTT-GT-TTTAAAGTTCAATTGAGA------GTTTTAAATGTCTT-TAAT-AACTTTT--ATT----CCAT----CTTACCTTCC---------AAAAATA-GCAATGC-TTTTAAAACAAGTCAATGATATTTTTATATCAATCT-AAA-TA-----AAACTCTTGGGAATCT-GCCTATTTAAACGCAATTTTCC--GGGGC-TGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTT-TTCCCTTTGGTAACTGCTTCAACGTAATT---AGGTAAGTAAAGGTTACATAGACAACACAAACAGT------------------TCACAACTGGT-GAATTTAGAATATGTGTACTCGCTTGAA-ACATGTGGCCCT-T-CAAAATACCT----CTCTATTCA-CCATTCGAACAAAACAACGGTGTG--G----------AGAATGCCCAGGT--AAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAACTGAG----GTGCACAAACAA-AAAG-A--AA-------AAAATT-------GTCTAGCTAGCTAA---TTGTTTTAAATCTATCTACAGA----------------TAAAGGGGGTCGAGAAA-ATATTTC-AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTCA---AATTATTGAAACCTATAG--GGAGCAATGTT-AATATTTCA-TATACAAATCTAA-GAATA-AAGCAA-AATATTT-TGA--TT-TTATACCTA----------------AGCCTAATAGGTA-GTTGGTTT--GGAAACCCGATATCCC-CCTATATGAATCATGC-GTGCCTGACATAGCCT-AA-AATG------TTAAATATTAA
gi|1 : ------TC-AGTATTCACTTCATTGTA-AAAATGATA-------G---------TATA--ATGAACCCC-CC-ACCCACCCCCC--TTTCATGCTTGTAAAAC---------TTGTAGTGTAATTTTGTTTTGATTT---GAAATAGAC-CACAAGTAATAATGA-TTTCATAG-CAT--TATACAAAGT---AC-TT--AAATGA---TG-AATTTCTCTGTC-----ATAC-AACT---TTGTTA-C-AAATTA-ATATATTGG-CGCTCATGA-TAGATCATTCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----G-CCGGTTTG-T-ATTAGACG-----T------CCAATATGGAAGAC-CC-ATTGCATCA----------CATCTTGTACTCGATATTTATATACTT-----------TGGGCC-------------TAATATACGCACT-----TCTGA----------------TCTAATGTCTTTTGT-AAATTCGCAATC-AATTAT---------TTGT---ATC-CATATAAAATCCAACATTCA-----AAT-TACTTT----TGATGATACTTGAAAAATATTTTGT-GACTAATTTGAATAAGATT-AGAATTA-AAAATATTGAG--TACGCGCCTGACT-----------TAAAAATGG------------------ACATGGAAATTATACC-G-GTGTAA-CCTTCATTTATATACT-GTA--A-GTCATA-AGCAGATTTAAGAGGGAG-----GTCCAATGAGCCCCtataatgtttgataagctttatctatacaaatatatcagtaattgaagttcagtattcacttcattgtaaaaatgatagtataatgaaccccccacccacccccctttcatgcttgtaaaacttgtagtgtaattttgttttgatttgaaatagaccacaagtaataatgatttcatagcattatacaaagtacttaaatgatgaatttctctgtcatacaactttgttacaaattaatatattggcgctcatgatagatcattcatcctcatgtcagtgcatgctaaattgacactgtgccggtttgtattagacgtccaatatggaagacccattgcatcacatcttgtactcgatatttatatactttgggcctaatatacgcacttctgatctaatgtcttttgtaaattcgcaatcaattatttgtatccatataaaatccaacattcaaattacttttgatgatacttgaaaaatattttgtgactaatttgaataagattagaattaaaaatattgagtacgcgcctgacttaaaaatggacatggaaattataccggtgtaaccttcatttatatactgtaagtcataagcagatttaagagggaggtccaatgagcccc
gi|10 : ataaatgagacatctataataacatgtttacaaatgtgctcaaaagttaaatgcgatcatggttaactatggaaaaggtgaaaatataatcaaatttgctatttttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatgggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatatttaatctaggaggaaaaaattttaataatggacaatttgaagtgatttttataaatctccaataaatctgtaaagttgttttaaagttcaattgagagttttaaatgtctttaataacttttattccatcttaccttccaaaaatagcaatgcttttaaaacaagtcaatgatatttttatatcaatctaaataaaactcttgggaatctgcctatttaaacgcaattttccggggctgatttatggatggaaaggcttttttcatcaagagttttccctttggtaactgcttcaacgtaattaggtaagtaaaggttacatagacaacacaaacagttcacaactggtgaatttagaatatgtgtactcgcttgaaacatgtggcccttcaaaatacctctctattcaccattcgaacaaaacaacggtgtggagaatgcccaggtaagacgtttgcaggagatggagccatgttagtacaggtgaactgaggtgcacaaacaaaaagaaaaaaattgtctagctagctaattgttttaaatctatctacagataaagggggtcgagaaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaaattattgaaacctatagggagcaatgttaatatttcatatacaaatctaagaataaagcaaaatattttgattttatacctaagcctaataggtagttggtttggaaacccgatatccccctatatgaatcatgcgtgcctgacatagcctaaaatgttaaatattaatataatgtttgataagctttatctatacaaatatatcagtaattgaagtTCAATA-TAATAAACTACTGTTTTTCAAAAATGTGCTCAAAAGTTAGAATGCTGGTCATTGTT-CTTAATGAAACAGGTG-AAATATCATCAATTGTTTGCTTA-TTTTCCGAGAATTAAGGTAGTTATAACCACAAAAACTCAAAAACAACTAAT-TATTAATTATGTTAAAATTGTATTTTTCATATC-AAATAATCAAATAG-ATCCTACCATTTT-ATTTA-AGAGGAAAAT--GTCA-ATAATGGAC--AA-ATTGAAGTAATTTTTAAAA---TT-CAA-TATATCTG
gi|11 : ACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATATAG------TTGTAAAC-AA--TACAGATGT--G-CACTCATGACTA------CCATCCTACATGTCAGACTGCATAGCTAAATATGACATCTGCTCGGA-C--GCTTGAT-ATTACATGAGATATG-ACTGTCAAAATGAAGAAA-CCAATTCCATCAGTCTCTCCCCCATCTC-TGCTCGATATTTTTATACTTGTCTTTCAGTTTGGGCC-------------TAATATATGCACTCTGAGTCTG
gi|12 : TCATATCCAAATGATAACATATGATCCTAATCTTTTGATTTAAGGAGGAAAAA--ATTATATAATGGACCTAT-TTTGAAGTAATTTTCATAA---TTGCAAATAAATCTGTGAAGTTTGTGTTTAAA-TCCAAT---CAATTTTTTTTTT--GTGTC-AATAATCAACTTTTTAATTCTATCCACAGCCC-CGCC-CCCCCCCAAAAAAAAAATAAGCAGTGCTTTTTAAAACAACT
gi|13 : -A-TCATAA----AA-ACGTGAAATCCTA---AAAATCAAACGTTTAGT--TCTT-TACTGT----TGATGATACTTGAAAAATATAT-CT-GACTAATTTGAAT-TGAAC-AG-ATTGAAAAATACTACA--TACA---CTGGCTAAAAAAAtt
gi|14 : TGCTGGGCATGGTT-ACTATGGAAACAGGTG-AAATATCATCAA--ATTTGGGTA-TTTTCCAGAAAT--GGGTGATTTTTGC-ACAAAAACTC-ACA-CAACAAAT-TATTAATTGTCTTAATATTGTATTTTT
gi|15 : CATG-TTATTAA-T---------TA----------TTTATTTATTTCT--TGAAATACATTCACAAGTAA-AATGG-TT-CATAGACAT--TAGACAATGT---ACATT--A--TGA---TT-AATTTGTCTGTC-----ATA--G------TTGTATAC-AAATTA
gi|16 : taaaTCCAAGACGTTTTGCTGGAGATAGAGCAAACTTTATCCATGTTAGTTCAGGTGAGTGTAAAAAATATAA---A--AA-------AAAATCCCCAAAAATCTAGCTAG
gi|17 : atgtgcaacataATATGCGTACTCTG------AAATTGAGATACATGT-ATT-ATGTC-TTTGT-AAATTTGCAATT-A-TTA
gi|18 : AATGAGACATCTATA-TAACA------TGTTTT-CATAAATGTGCTCAAAAG
gi|19 : cg-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATTTAC--AA-TTTGAA
gi|2 : ATGAATGAGACATCTATA-TAACA------AGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-GCTATGGAAACCGGTG-AAATATAATCAA--ATTTGACTA-TTTTCCAAGAAT--GAGTAGTTTTTGC-A-AAAAAC-CAAAA-CAACAAAT-TATTAATTGTCTTACAATTGTATTTTTCAAATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTG-ATAATGGAC--AAATTTGAAGTGATTTTCATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TCTTT--ATGTC-T-TAAT-AACTTTT--AT-C---CCAT----C-AACC-TCC-------AAAAAAATA-GCAATGCTTTTTGAAACAACTAATTGATGTATTTA-ATCAATATAAAA-TA-----AAACTTTTGGGAATCTCGCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-TACACAAATAATATGGCGGGATGATTGTTCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTT-C-CAAAATACCT----CTCTATTCA-CCATTCGAAGAAAGAAA--GTGTG-A-----------GGAATG-TCAGGTCCAAGACG-TT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTACAACCCA-AA---A----------------T-------ATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTCAAACTGAAGTGGCTTCCATTCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AAT--------------ATCTAA-GCATATAAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------ACTAGCC-ATTAGGTG-GTTGGATT--G--AACCCGATATCCC-TC-ATATGTAT-ATGG-GTGTCTGCCATAGCCTAAA-AATG------TT-AATATTGACCT-----TAGAAAATGATA-------GACTAGTACATGTATAATGCCCCCC-----CCC-----CC---------CTTGT--A-C---------TT----------TTTGTTTTATTTT---GAAATACAT-CACAAGTAA-AATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCACTGTC-----ATA--G------TTGTAAAC-AAATTACAGATGT--GACACTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GACA-GGTTG-T-ATTACATG-----TATAC-GTCAAAAT-GAAG-A-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCCTACATTTTTTTTGTAATATATGCACTCTGAGTCTGAAATTGAGATAC--AT-TTTAATGTC-TTTGT-AAATTCGCAATC-A-TTATAA----AATTTGT---ATCATA---AAAATCAAGCATTTATTTATAAT-TACTTT----TTATGATACTTGAAAAATATTT-GT-GACTAATTTAAATATGAAG-AGAATT--AAAATACTGAG--TACG---CTGGCCAAAAAAAAAAAAAAAAAAAAAAAACAACAAAAAACCATACATGGAA---ATACCC--GTGTA-GTCTTCATTTATACACTGGTACAA-GTCATAG-GCGGATTT-AGAGG--AGGCCTGCCCCAGGAGCCCC
gi|3 : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGATCATGGTT-ACTATGGAAACAGGTG-AAATATAATCAA--ATTTGGCTA-TTTTCTAGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAAT-GGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATCTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------GTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-TACC-TTC-------CAAAAAATA-GCAATGCTTTTTAAAACAAGTCATTGATATTTTTA-ATCAATCTAAAA-TA-----AAACTCTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTTTTTCCCCTTTGGTACT-CTTCAACGTAATT---AGGT-AGTAAA-GTTACATAGA-AACACAAAC--------------A-TG-TCTCACAACTGGTGGAATTTAGAATAT-TGTACTCGCTTGAAGACATGTGGCCTT-CAAAAAATACCT----CTCTATTCACCCATTCGAACAAAACAA--GTGTG-A-----------GGAATG-CCAGGTCCAAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAAC-----TGAGTGCACAAACCA-AA---AAGAA-------AAAATT-------GTCTAGCTAGC-AATTGTT-TAT-AAA--TC--TACAGA----------------TAAAGGGGGTCGAGAAATA--TTTC-AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTC----AATTATTGAAACC-ATA---GGAGC-ATG-T-AATATTTCA-TATACAAATCTAA-GAATA-AAGC-A-AATATTT-TGA--TT-TTATACCTAGCCT---------A--A------TAGGTA-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGAAT-ATGC-GTGCCTGACATAGCCT-AA-AATGTTAAATTT-AATATTGACCC-----TT-AAGATc
gi|3 : gcATA------TT-A-TATTG---------TA-AAAATGATA-------G---------TA-ATAATGCCCCCCACCCACCC-----CCCTTTTCATGCTTGTAAA-C---------TT----------TGTGTTTTTTTTTTGTGAAATACAC-CAC-AGTAATAATGTATTTCATAGA-AT--TATACAATGT---ACATTAAA--TGA---TGAAATTTCTCTGTC-----ATAC-T------TTGT-AAC-AAATTAC---TAT--T-CGCCGATGATCA----------CTT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GCC--GGTTGATCATTA---G-----CA-AC-GTCAATATGGAAGGACCC-ATTGCATCA----------CATC--------------TTTATACTTGTC------TTTGGtttgtaagctttatctattacaaatatatcagtacattgaattcatattatattgtaaaaatgatagtaataatgccccccacccaccccccttttcatgcttgtaaactttgtgttttttttttgtgaaatacaccacagtaataatgtatttcatagaattatacaatgtacattaaatgatgaaatttctctgtcatactttgtaacaaattactattcgccgatgatcacttcatgtcagtgcatgctaaattgacactgtgccggttgatcattagcaacgtcaatatggaaggacccattgcatcacatctttatacttgtctttggct
gi|4 : gcataaatgagacatctatataacatgtttacaaaaatgtgctcaaaagttaaatgctgatcatggttactatggaaacaggtgaaatataatcaaatttggctattttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatattttaatctaggaggaaaaatttaataatggacaatttgaagtgatttttataattcaataaatctgtaaagttgtgtttaaattcaatgagttttatgtcttaataacttttattcccatctaccttccaaaaaatagcaatgctttttaaaacaagtcattgatatttttaatcaatctaaaataaaactcttgggaatctgcctatttaacgcaattcgaggggcatgatttatggatggaaaggcttttttcatcaagagtttttcccctttggtactcttcaacgtaattaggtagtaaagttacatagaaacacaaacatgtctcacaactggtggaatttagaatattgtactcgcttgaagacatgtggccttcaaaaaatacctctctattcacccattcgaacaaaacaagtgtgaggaatgccaggtccaagacgtttgcaggagatggagccatgttagtacaggtgaactgagtgcacaaaccaaaaagaaaaaattgtctagctagcaattgtttataaatctacagataaagggggtcgagaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaattattgaaaccataggagcatgtaatatttcatatacaaatctaagaataaagcaaatattttgattttatacctagcctaataggtagttggtttgaacccgatatcccccatatgaatatgcgtgcctgacatagcctaaaatgttaaatttaatattgacccttaagattttgtaagctttatctattacaaatatatcagtacattgaattcAAT---GA------TTTTT--ATGTC-T-TAAT-CACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTGAAACAACTAATTGATGTTTTTA-TTCAATATAAAAATA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATAGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATTTATAGGT-AGTAAA-GTTGCATAGC-TACACAAATAATATGGCGGGATGA-GG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTTCC-AAAAATACCT----CTCTATTCACCCATTAGAAGAAAGGAA--GTGTG-A-----------GGAATG-TCTGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTAC-AGCCA-AA---A--AAGAAAAAGAAAA-T-------ATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACTGAAATGACTTCCA-TCCCATGCATTTTAAAAAGGTTCAATTAATTATTGAAACC-ATA---GGGGC-ACG-T-AAT--------------ATCTAA-GCATATAAGT-A-TATATTT-TAA--TT-TTCTACCTAGCCCAATACTGCAA-TAGCC-ATTAct
gi|4 : -ATTAG-TGCGTTGGATT--G--AACCCGACATCCCATC-ATATATAT-ATGCCGTGTCTGACATAGCCA-AACAATG------TT-AATATTGACCT-----TA-AGATTTATA-------ctggnnnnnnnnnnnnnnnnnnnnnnnnnaaattagtgcgttggattgaacccgacatcccatcatatatatatgccgtgtctgacatagccaaacaatgttaatattgaccttaagatttataaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|5 : aatgatttttatgtcttaatcacttttattcccatccacctccaaaaaaatagcagtgctttttgaaacaactaattgatgtttttattcaatataaaaataaaacttttgggaatctgcctatttaacgcaattcgaggggcatgatttatagagggaaaggctttttttaaccaagagttattcccctttgaaactcttcaacgtcatttataggtagtaaagttgcatagctacacaaataatatggcgggatgaggtctcacaactggtggaatttagaagattgtactcgattgaagacatgtggcgttccaaaaatacctctctattcacccattagaagaaaggaagtgtgaggaatgtctggtccaagacgtttgctggagatagagccatgttagtacaggtgactgaggtgagtgtacagccaaaaaagaaaaagaaaatatctagctagcaatttatcgaataacatgtttaaagcgggtcgagaaatgttttcaactgaaatgacttccatcccatgcattttaaaaaggttcaattaattattgaaaccataggggcacgtaatatctaagcatataagtatatattttaattttctacctagcccaatactgcaatagccattactggnnnnnnnnnnnnnnnnnnnnnnnnnaa-AACGCAATT---TGAGGGCCATGCTTTATAT-GGGAAAAGC--AGTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CCACACCGTCATA---AGGT-AGTAAA-GTTACATACG-AACACAAATAATATGGCGGGATGA-TG-TCTTACAACTGGCGGATTTTAGAAGAT-TTTACTCGCTTAAAGACATTTCGCATT-C-AAAAATACCTCTCCCTCCAGTCACTCATTCAAACAAATAAA--GTGCG-AGGGCATATTACGGAATG-CCAGATCCAAGACGTTT-GCTGGACAAAGA---------------GTAAAC-GA-GTGAGTGTAGAACCCA-AAATGA--AA-------AAAAAA-------ATCTGACTAGC-AA---TT-TATTGAA--TA---ACATGTTAATAAACCTACAGTTAAAGCAGGTCGAGAAATGT-TTTC-AGTGGAAGCGGGTTCCA-ACCCATGTATTTTC-AAGGGTTC----AATTATTGAAACA-ATA---GGAGC-ACG-T-GCTGTTTCA-TATACAAATATAA-GCATA-AAGC-A-AACATTC-TGA--TT-TTCAACCTAGCCC---------A--ATCT-AT---GTG-GTTGGTTT-----ATCCCGATATCCC-CC-Aaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|6 : ATAATTGAAAAA-AAATGGGGAGC-ACG-TTAATGTT-CACTATACACATCTAAAGCATA-AATC-ACAATACTTCTAAAGTTATTCTACCT----------------TAGCC-AGTAGGTG-GTTGGTTTCGG--GACCCGATATCCC-C--------AT-ATGC--TGCCTGA
gi|6 : ATTG---T-----TA-AAAATAATAACATGTAG---------TATA-AATGGAACCCACC-ACCC-----CC--CTCAATGATTGTAAA-CATGAGTTATTT----------TTTATTTTTTTTT--CGAAATACAT-CAT-AGTAA-AATGT-TTTCATAGACATTCTAGACAATATGTCACATT--ATCTGAATCTG-AATTTGT-TGTCTTTCGATAC-ACTACTCTTGTATACAAAATTAacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaattgttaaaaataataacatgtagtataaatggaacccaccacccccctcaatgattgtaaacatgagttattttttatttttttttcgaaatacatcatagtaaaatgttttcatagacattctagacaatatgtcacattatctgaatctgaatttgttgtctttcgatacactactcttgtatacaaaattagtcaatcgttgtcactcagctagtc
gi|7 : ataattgaaaaaaaatggggagcacgttaatgttcactatacacatctaaagcataaatcacaatacttctaaagttattctaccttagccagtaggtggttggtttcgggacccgatatccccatatgctgcctgaacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaAA---AT-CAG-AAAGTC---AAAGTT-AT---TGA--TTAAAT---GA------CTTTT--ATGTC-T-CAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC---------AAACATG-GGAGTGTTTTTTAAAACAACTGATTTATGTTTTTA-ATAAATCTAAAA-TA-----AAACTTTTTGGCATCT-GCCTATTT-AACGCAATT---TCAGGGGCATGTTTTATGGGGGGAAAGGCGTTTTTTTTAA-CAAGCAGTTATTCCCCTTTGAAACT-CTTCAACGTTATA---AGGT-AGTGAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TA-TCTCACAACTGGTGGAATTTAGAAGAT-TGAACTCGCTTGAAAGCATAAGGAGCT-C-AAAACTTCCC----AACTAGTCACC--------CAAAGAAA--GTGTGAAG----------GGCATG-TCAgtcaatcgttgtcactcagctagtc
gi|8 : TGCTGATCACTGTT-GGTATGGAAACTGGTC-AAATATTATCAA--AGTTGGCTA-TTTTCCAGAATT--CAGTAGTTTTTGC-ACAAATATTCAAAG-CAACAAAT-TATTGATTGTTTTAAAATTGTATTTTTCATTTC-TAATGATAAAATAA-ATCCTA-TATTTTAATTCG-AGAGG-AAAA--TTCA-ATAATGGAC--AA-TTTGAAGGGATTTTTATAA---TT-CAA-TAAGTCTGTGAAGTT-GTGTTTAAA-TCCAAT---GA------TTTTT--AAGTC-T-TAAT-AGCCTTT--ATT----CCAT----C-AACC-TCT-------CAAAAAATA------GTTTTTTAAAACAAGTAATTTATGTTTTTC-ATAAAT-TAAAA-AAAACCCAAACTTTTGGGAATCT-GCCTATTT-Acggaataccaggccc
gi|9 : AATAGATG-ACTCTGAGTCTGAAATTGAGATACC-GTGTTTAATGTCTTTTGTGAAATTCGCAATCCA-TTATAACACAAATATGT---TT-------AAAATC---CATTTTTTA-TAAGATACTTTAGTTTGAT-ATACTTGAAAA---TTT-GTTGACTAATT--AATTTGAAGGAGAATT--ATAATACTGAGATTACG---CTGGC-AATAAAAAAACCAAAACCAGCAAACA-CAAAATAC-ATA-ATGGAAAT-A--CCCGAGTGTAGGTCTTC-TTTATACAAT-GTACAAAGTCATAGAGCAG-TTTA-GAGGGAGGGCCTGCCCCAGGAGGCCC
Alignments
lowQualScore : 222222 1 1 111 111 111111 1111 1111 33333333 11111 111 111 1111 5555555555555 4444444444444444444444444444 111 11 555555555555555555555555 3333 111 2222222 1 4444444444444 11111 1 1 111111 111111111 55555555555555555 1 1111 2222222222 55555555555555555555555 222 1 2 11 111 11111 111 11111 444444444 2222 3333333 1 11 1 1 1 5555555555 111 111 44444444444 111 1 4444444444 111 222222 7777777777777 33333 1 1 1 2222 444444444444 3333 1 2222 1 1 11 22 11 111 222222 66666666666666666666 2222222 22 2 1 1 11 11
lowQualScore : 8 333333 99 0 0 6 6 1 99 6 99 6 6 6 1 6 6 1 0 5 77 5 77 5 000 5 5 6 6 6 000 666666 77 666 5 77 4444 2222 77 5 00000000 5 0 0 1 6 6 6 66666 6 5 111 2 1 99 7 3 6 3 6 1 111 6 6 6 3 9999 6 1 1 6 6 4444 6 1 99 0000000000000 6 6 7 7 55 1 6 3333333333333333333333333333 8 444 8 6 11 888888888888888888888888 0 88 8 1 8 0 1111 6 888 6 6 6 1111111 3 6 3 6 6 6 99 6 2 4444444444444 2 5 1 6 66666 7777 3 8 8 0 0 999999 6 1 888888888 6 66666666666666666 3 5 22 8888 5555555555 0 5 6 55555555555555555555555 1 777 8 0 0 99 0 0 11 0 111 88888 111 6 66666 666666666 3 6 888 0000 6 5555555 0 33 0 0 0 1111111111 1 666 000 00000000000 1 2 444 0 3333333333 333 0 2 888888 3333333333333 3 5 3 11111 3 5 0 6 0 1111 44 333333333333 9 0 0000 0 1111 2 3 0 0 33 9 11 3 99 33 777 444444 1 22222222222222222222 6 3333333 00 3 7 3 7 3 44 0 7 44 7777
lowQualScore : . ...... .. . . . . . .. . .. . . . . . . . . . .. . .. . ... . . . . . ... ...... .. ... . .. .... .... .. . ........ . . . . . . . ..... . . ... . . .. . . . . . . ... . . . . .... . . . . . .... . . .. ............. . . . . .. . . ............................ . ... . . .. ........................ . .. . . . . .... . ... . . . ....... . . . . . . .. . . ............. . . . . ..... .... . . . . . ...... . . ......... . ................. . . .. .... .......... . . . ....................... . ... . . . .. . . .. . ... ..... ... . ..... ......... . . ... .... . ....... . .. . . . .......... . ... ... ........... . . ... . .......... ... . . ...... ............. . . . ..... . . . . . .... .. ............ . . .... . .... . . . . .. . .. . .. .. ... ...... . .................... . ....... .. . . . . . .. . . .. ....
lowQualScore : 0 000000 44 8 0 7 7 0 22 7 22 7 7 7 0 7 7 4 1 7 99 7 99 7 000 7 7 7 7 7 000 444444 99 111 7 99 3333 1111 44 7 44444444 7 4 7 5 7 7 7 77777 7 7 777 5 7 22 3 7 7 5 7 0 777 7 7 7 2 2222 7 0 0 7 7 2222 7 5 22 0000000000000 7 7 3 3 00 5 7 8888888888888888888888888888 0 000 0 4 00 666666666666666666666666 8 88 0 4 0 8 8888 7 333 7 7 7 2222222 0 7 3 7 7 7 22 7 5 7777777777777 5 7 6 7 77777 0000 8 0 0 0 0 222222 7 7 555555555 7 00000000000000000 2 5 00 0000 8888888888 8 0 0 44444444444444444444444 0 444 0 6 4 00 8 8 00 6 777 55555 777 7 77777 333333333 5 7 222 0000 5 2222222 0 88 0 0 0 0000000000 0 555 000 00000000000 0 5 000 0 8888888888 555 2 5 888888 3333333333333 2 6 2 00000 2 5 0 0 8 2222 22 888888888888 2 8 0000 0 2222 5 2 0 0 55 8 00 2 00 88 555 555555 0 00000000000000000000 7 7777777 00 3 3 3 3 3 00 7 3 77 7777
consensus : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAAACCA-AA---A--AA-------AAAATT-------ATCTAGCTAGC-AA---TT-TATCGAA--TA--TACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNNCCCCACC-ACCC-----CC--TTTCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTT--CGAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATAC-G------TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAATCAAACATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCT--AAAAAAAAAANAAAAAC--GNAAAC-ACAAAA-A--CATACATGGAAA-TATACCCG-GTGTA-GTCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
Reference ( family-5052 ) : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAAACCA-AA---A--AA-------AAAATT-------ATCTAGCTAGC-AA---TT-TATCGAA--TA--TACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNNCCCCACC-ACCC-----CC--TTTCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTT--CGAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATAC-G------TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAATCAAACATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCT--AAAAAAAAAANAAAAAC--GGAAAC-ACAAAA-A--CATACATGGAAA-TATACCCG-GTGTAGGTCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
gi|1 : ATAAATGAGACATCTATAATAACA------TGTTTA-CAAA--TGTGCTCAAAAGTTA-AATGC-GATCATGGTTAACTATGGAAA-AGGTGAAAATATAATCAA--ATTT-GCTATTTTTCTAGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAATGGGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TA-TTTAATCTA-GGAGGAAAAAATTTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAAATCTC-CAA-TAAATCTGTAAAGTT-GT-TTTAAAGTTCAATTGAGA------GTTTTAAATGTCTT-TAAT-AACTTTT--ATT----CCAT----CTTACCTTCC---------AAAAATA-GCAATGC-TTTTAAAACAAGTCAATGATATTTTTATATCAATCT-AAA-TA-----AAACTCTTGGGAATCT-GCCTATTTAAACGCAATTTTCC--GGGGC-TGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTT-TTCCCTTTGGTAACTGCTTCAACGTAATT---AGGTAAGTAAAGGTTACATAGACAACACAAACAGT------------------TCACAACTGGT-GAATTTAGAATATGTGTACTCGCTTGAA-ACATGTGGCCCT-T-CAAAATACCT----CTCTATTCA-CCATTCGAACAAAACAACGGTGTG--G----------AGAATGCCCAGGT--AAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAACTGAG----GTGCACAAACAA-AAAG-A--AA-------AAAATT-------GTCTAGCTAGCTAA---TTGTTTTAAATCTATCTACAGA----------------TAAAGGGGGTCGAGAAA-ATATTTC-AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTCA---AATTATTGAAACCTATAG--GGAGCAATGTT-AATATTTCA-TATACAAATCTAA-GAATA-AAGCAA-AATATTT-TGA--TT-TTATACCTA----------------AGCCTAATAGGTA-GTTGGTTT--GGAAACCCGATATCCC-CCTATATGAATCATGC-GTGCCTGACATAGCCT-AA-AATG------TTAAATATTAA
gi|1 : ------TC-AGTATTCACTTCATTGTA-AAAATGATA-------G---------TATA--ATGAACCCC-CC-ACCCACCCCCC--TTTCATGCTTGTAAAAC---------TTGTAGTGTAATTTTGTTTTGATTT---GAAATAGAC-CACAAGTAATAATGA-TTTCATAG-CAT--TATACAAAGT---AC-TT--AAATGA---TG-AATTTCTCTGTC-----ATAC-AACT---TTGTTA-C-AAATTA-ATATATTGG-CGCTCATGA-TAGATCATTCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----G-CCGGTTTG-T-ATTAGACG-----T------CCAATATGGAAGAC-CC-ATTGCATCA----------CATCTTGTACTCGATATTTATATA-----C------TTTGGGCC-------------TAATATACGCACT-----TCTGA----------------TCTAATGTCTTTTGT-AAATTCGCAATCAATT---------ATTTGT---ATC-CATATAAAATCCAACATTCA-----AAT-TACTTT----TGATGATACTTGAAAAATATTTTGT-GACTAATTTGAATAAGATT-AGAATTA-AAAATATTGAG--TACGCGCCTGACT------------TAAAAAT--GG------------------ACATGGAAATTATA-CCG-GTGTA-ACCTTCATTTATATACT-GT--AA-GTCATA-AGCAGATTTAAGAGGGAG-----GTCCAATGAGCCCCtataatgtttgataagctttatctatacaaatatatcagtaattgaagttcagtattcacttcattgtaaaaatgatagtataatgaaccccccacccacccccctttcatgcttgtaaaacttgtagtgtaattttgttttgatttgaaatagaccacaagtaataatgatttcatagcattatacaaagtacttaaatgatgaatttctctgtcatacaactttgttacaaattaatatattggcgctcatgatagatcattcatcctcatgtcagtgcatgctaaattgacactgtgccggtttgtattagacgtccaatatggaagacccattgcatcacatcttgtactcgatatttatatactttgggcctaatatacgcacttctgatctaatgtcttttgtaaattcgcaatcaattatttgtatccatataaaatccaacattcaaattacttttgatgatacttgaaaaatattttgtgactaatttgaataagattagaattaaaaatattgagtacgcgcctgacttaaaaatggacatggaaattataccggtgtaaccttcatttatatactgtaagtcataagcagatttaagagggaggtccaatgagcccc
gi|10 : ataaatgagacatctataataacatgtttacaaatgtgctcaaaagttaaatgcgatcatggttaactatggaaaaggtgaaaatataatcaaatttgctatttttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatgggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatatttaatctaggaggaaaaaattttaataatggacaatttgaagtgatttttataaatctccaataaatctgtaaagttgttttaaagttcaattgagagttttaaatgtctttaataacttttattccatcttaccttccaaaaatagcaatgcttttaaaacaagtcaatgatatttttatatcaatctaaataaaactcttgggaatctgcctatttaaacgcaattttccggggctgatttatggatggaaaggcttttttcatcaagagttttccctttggtaactgcttcaacgtaattaggtaagtaaaggttacatagacaacacaaacagttcacaactggtgaatttagaatatgtgtactcgcttgaaacatgtggcccttcaaaatacctctctattcaccattcgaacaaaacaacggtgtggagaatgcccaggtaagacgtttgcaggagatggagccatgttagtacaggtgaactgaggtgcacaaacaaaaagaaaaaaattgtctagctagctaattgttttaaatctatctacagataaagggggtcgagaaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaaattattgaaacctatagggagcaatgttaatatttcatatacaaatctaagaataaagcaaaatattttgattttatacctaagcctaataggtagttggtttggaaacccgatatccccctatatgaatcatgcgtgcctgacatagcctaaaatgttaaatattaatataatgtttgataagctttatctatacaaatatatcagtaattgaagtTCAATA-TAATAAACTACTGTTTTTCAAAAATGTGCTCAAAAGTTAGAATGCTGGTCATTGTT-CTTAATGAAACAGGTG-AAATATCATCAATTGTTTGCTTA-TTTTCCGAGAATTAAGGTAGTTATAACCACAAAAACTCAAAAACAACTAAT-TATTAATTATGTTAAAATTGTATTTTTCATATC-AAATAATCAAATAG-ATCCTACCATTTT-ATTTA-AGAGGAAAAT--GTCA-ATAATGGAC--AA-ATTGAAGTAATTTTTAAAA---TT-CAA-TATATCTG
gi|11 : ACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATATAG------TTGTAAAC-AA--TACAGATGT--G-CACTCATGACTA------CCATCCTACATGTCAGACTGCATAGCTAAATATGACATCTGCTCGGA-C--GCTTGAT-ATTACATGAGATATG-ACTGTCAAAATGAAGAAA-CCAATTCCATCAGTCTCTCCCCCATCTC-TGCTCGATATTTTTATACTTGTCTTTCAGTTTGGGCC-------------TAATATATGCACTCTGAGTCTG
gi|12 : TCATATCCAAATGATAACATATGATCCTAATCTTTTGATTTAAGGAGGAAAAA--ATTATATAATGGACCTAT-TTTGAAGTAATTTTCATAA---TTGCAAATAAATCTGTGAAGTTTGTGTTTAAA-TCCAAT---CAATTTTTTTTTT--GTGTC-AATAATCAACTTTTTAATTCTATCCACAGCCC-CGCC-CCCCCCCAAAAAAAAAATAAGCAGTGCTTTTTAAAACAACT
gi|13 : -ATCATAA----AA-ACGTGAAATCCTA---AAAATCAAACGTTTAGT--TCTT-TACTGT----TGATGATACTTGAAAAATA-TATCT-GACTAATTTGAAT-TGAAC-AG-ATTGAAAAATACTACA--TACA---CTGGCT--AAAAAAAtt
gi|14 : TGCTGGGCATGGTT-ACTATGGAAACAGGTG-AAATATCATCAA--ATTTGGGTA-TTTTCCAGAAAT--GGGTGATTTTTGC-ACAAAAACTC-ACA-CAACAAAT-TATTAATTGTCTTAATATTGTATTTTT
gi|15 : CATG-TTATTAA-T---------TA----------TTTATTTATTTCT--TGAAATACATTCACAAGTAA-AATGG-TT-CATAGACAT--TAGACAATGT---ACATT--A--TGA---TT-AATTTGTCTGTC-----ATA--G------TTGTATAC-AAATTA
gi|16 : taaaTCCAAGACGTTTTGCTGGAGATAGAGCAAACTTTATCCATGTTAGTTCAGGTGAGTGTAAAAAATATAA---A--AA-------AAAATCCCCAAAAATCTAGCTAG
gi|17 : atgtgcaacataATATGCGTACTCTG------AAATTGAGATACATGT-ATT-ATGTC-TTTGT-AAATTTGCAATT-ATTA
gi|18 : AATGAGACATCTATA-TAACA------TGTTTT-CATAAATGTGCTCAAAAG
gi|19 : cg-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATTTAC--AA-TTTGAA
gi|2 : ATGAATGAGACATCTATA-TAACA------AGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-GCTATGGAAACCGGTG-AAATATAATCAA--ATTTGACTA-TTTTCCAAGAAT--GAGTAGTTTTTGC-A-AAAAAC-CAAAA-CAACAAAT-TATTAATTGTCTTACAATTGTATTTTTCAAATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTG-ATAATGGAC--AAATTTGAAGTGATTTTCATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TCTTT--ATGTC-T-TAAT-AACTTTT--AT-C---CCAT----C-AACC-TCC-------AAAAAAATA-GCAATGCTTTTTGAAACAACTAATTGATGTATTTA-ATCAATATAAAA-TA-----AAACTTTTGGGAATCTCGCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-TACACAAATAATATGGCGGGATGATTGTTCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTT-C-CAAAATACCT----CTCTATTCA-CCATTCGAAGAAAGAAA--GTGTG-A-----------GGAATG-TCAGGTCCAAGACG-TT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTACAACCCA-AA---A----------------T-------ATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTCAAACTGAAGTGGCTTCCATTCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AAT--------------ATCTAA-GCATATAAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------ACTAGCC-ATTAGGTG-GTTGGATT--G--AACCCGATATCCC-TC-ATATGTAT-ATGG-GTGTCTGCCATAGCCTAAA-AATG------TT-AATATTGACCT-----TAGAAAATGATA-------GACTAGTACATGTATAATGCCCCCC-----CCC-----CC---------CTTGT--A-C---------TT----------TTTGTTTTATTTT---GAAATACAT-CACAAGTAA-AATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCACTGTC-----ATA--G------TTGTAAAC-AAATTACAGATGT--GACACTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GACA-GGTTG-T-ATTACATG-----TATAC-GTCAAAAT-GAAG-A-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCCTACATTTTTTTTGTAATATATGCACTCTGAGTCTGAAATTGAGATAC--AT-TTTAATGTC-TTTGT-AAATTCGCAATC-ATTATAA----AATTTGT---ATCATA---AAAATCAAGCATTTATTTATAAT-TACTTT----TTATGATACTTGAAAAATA-TTTGT-GACTAATTTAAATATGAAG-AGAATT--AAAATACTGAG--TACG---CTGGCCAAAAAAAAAAAAAAAAAAA--AAAAACAACAAAA-AACCATACATGGAA---ATACCC--GTGTA-GTCTTCATTTATACACTGGTACAA-GTCATAG-GCGGATTT-AGAGG--AGGCCTGCCCCAGGAGCCCC
gi|3 : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGATCATGGTT-ACTATGGAAACAGGTG-AAATATAATCAA--ATTTGGCTA-TTTTCTAGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAAT-GGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATCTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------GTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-TACC-TTC-------CAAAAAATA-GCAATGCTTTTTAAAACAAGTCATTGATATTTTTA-ATCAATCTAAAA-TA-----AAACTCTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTTTTTCCCCTTTGGTACT-CTTCAACGTAATT---AGGT-AGTAAA-GTTACATAGA-AACACAAAC--------------A-TG-TCTCACAACTGGTGGAATTTAGAATAT-TGTACTCGCTTGAAGACATGTGGCCTT-CAAAAAATACCT----CTCTATTCACCCATTCGAACAAAACAA--GTGTG-A-----------GGAATG-CCAGGTCCAAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAAC-----TGAGTGCACAAACCA-AA---AAGAA-------AAAATT-------GTCTAGCTAGC-AATTGTT-TAT-AAA--TC--TACAGA----------------TAAAGGGGGTCGAGAAATA--TTTC-AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTC----AATTATTGAAACC-ATA---GGAGC-ATG-T-AATATTTCA-TATACAAATCTAA-GAATA-AAGC-A-AATATTT-TGA--TT-TTATACCTAGCCT---------A--A------TAGGTA-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGAAT-ATGC-GTGCCTGACATAGCCT-AA-AATGTTAAATTT-AATATTGACCC-----TT-AAGATc
gi|3 : gcATA------TT-A-TATTG---------TA-AAAATGATA-------G---------TA-ATAATGCCCCCCACCCACCC-----CCCTTTTCATGCTTGTAAA-C---------TT----------TGTGTTTTTTTTTTGTGAAATACAC-CAC-AGTAATAATGTATTTCATAGA-AT--TATACAATGT---ACATTAAA--TGA---TGAAATTTCTCTGTC-----ATAC-T------TTGT-AAC-AAATTAC---TAT--T-CGCCGATGATCA----------CTT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GCC--GGTTGATCATTA---G-----CA-AC-GTCAATATGGAAGGACCC-ATTGCATCA----------CATC--------------TTTATACTTGTC------TTTGGtttgtaagctttatctattacaaatatatcagtacattgaattcatattatattgtaaaaatgatagtaataatgccccccacccaccccccttttcatgcttgtaaactttgtgttttttttttgtgaaatacaccacagtaataatgtatttcatagaattatacaatgtacattaaatgatgaaatttctctgtcatactttgtaacaaattactattcgccgatgatcacttcatgtcagtgcatgctaaattgacactgtgccggttgatcattagcaacgtcaatatggaaggacccattgcatcacatctttatacttgtctttggct
gi|4 : gcataaatgagacatctatataacatgtttacaaaaatgtgctcaaaagttaaatgctgatcatggttactatggaaacaggtgaaatataatcaaatttggctattttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatattttaatctaggaggaaaaatttaataatggacaatttgaagtgatttttataattcaataaatctgtaaagttgtgtttaaattcaatgagttttatgtcttaataacttttattcccatctaccttccaaaaaatagcaatgctttttaaaacaagtcattgatatttttaatcaatctaaaataaaactcttgggaatctgcctatttaacgcaattcgaggggcatgatttatggatggaaaggcttttttcatcaagagtttttcccctttggtactcttcaacgtaattaggtagtaaagttacatagaaacacaaacatgtctcacaactggtggaatttagaatattgtactcgcttgaagacatgtggccttcaaaaaatacctctctattcacccattcgaacaaaacaagtgtgaggaatgccaggtccaagacgtttgcaggagatggagccatgttagtacaggtgaactgagtgcacaaaccaaaaagaaaaaattgtctagctagcaattgtttataaatctacagataaagggggtcgagaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaattattgaaaccataggagcatgtaatatttcatatacaaatctaagaataaagcaaatattttgattttatacctagcctaataggtagttggtttgaacccgatatcccccatatgaatatgcgtgcctgacatagcctaaaatgttaaatttaatattgacccttaagattttgtaagctttatctattacaaatatatcagtacattgaattcAAT---GA------TTTTT--ATGTC-T-TAAT-CACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTGAAACAACTAATTGATGTTTTTA-TTCAATATAAAAATA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATAGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATTTATAGGT-AGTAAA-GTTGCATAGC-TACACAAATAATATGGCGGGATGA-GG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTTCC-AAAAATACCT----CTCTATTCACCCATTAGAAGAAAGGAA--GTGTG-A-----------GGAATG-TCTGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTAC-AGCCA-AA---A--AAGAAAAAGAAAA-T-------ATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACTGAAATGACTTCCA-TCCCATGCATTTTAAAAAGGTTCAATTAATTATTGAAACC-ATA---GGGGC-ACG-T-AAT--------------ATCTAA-GCATATAAGT-A-TATATTT-TAA--TT-TTCTACCTAGCCCAATACTGCAA-TAGCC-ATTAct
gi|4 : -ATTAG-TGCGTTGGATT--G--AACCCGACATCCCATC-ATATATAT-ATGCCGTGTCTGACATAGCCA-AACAATG------TT-AATATTGACCT-----TA-AGATTTATA-------ctggnnnnnnnnnnnnnnnnnnnnnnnnnaaattagtgcgttggattgaacccgacatcccatcatatatatatgccgtgtctgacatagccaaacaatgttaatattgaccttaagatttataaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|5 : aatgatttttatgtcttaatcacttttattcccatccacctccaaaaaaatagcagtgctttttgaaacaactaattgatgtttttattcaatataaaaataaaacttttgggaatctgcctatttaacgcaattcgaggggcatgatttatagagggaaaggctttttttaaccaagagttattcccctttgaaactcttcaacgtcatttataggtagtaaagttgcatagctacacaaataatatggcgggatgaggtctcacaactggtggaatttagaagattgtactcgattgaagacatgtggcgttccaaaaatacctctctattcacccattagaagaaaggaagtgtgaggaatgtctggtccaagacgtttgctggagatagagccatgttagtacaggtgactgaggtgagtgtacagccaaaaaagaaaaagaaaatatctagctagcaatttatcgaataacatgtttaaagcgggtcgagaaatgttttcaactgaaatgacttccatcccatgcattttaaaaaggttcaattaattattgaaaccataggggcacgtaatatctaagcatataagtatatattttaattttctacctagcccaatactgcaatagccattactggnnnnnnnnnnnnnnnnnnnnnnnnnaa-AACGCAATT---TGAGGGCCATGCTTTATAT-GGGAAAAGC--AGTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CCACACCGTCATA---AGGT-AGTAAA-GTTACATACG-AACACAAATAATATGGCGGGATGA-TG-TCTTACAACTGGCGGATTTTAGAAGAT-TTTACTCGCTTAAAGACATTTCGCATT-C-AAAAATACCTCTCCCTCCAGTCACTCATTCAAACAAATAAA--GTGCG-AGGGCATATTACGGAATG-CCAGATCCAAGACGTTT-GCTGGACAAAGA---------------GTAAAC-GA-GTGAGTGTAGAACCCA-AAATGA--AA-------AAAAAA-------ATCTGACTAGC-AA---TT-TATTGAA--TA---ACATGTTAATAAACCTACAGTTAAAGCAGGTCGAGAAATGT-TTTC-AGTGGAAGCGGGTTCCA-ACCCATGTATTTTC-AAGGGTTC----AATTATTGAAACA-ATA---GGAGC-ACG-T-GCTGTTTCA-TATACAAATATAA-GCATA-AAGC-A-AACATTC-TGA--TT-TTCAACCTAGCCC---------A--ATCT-AT---GTG-GTTGGTTT-----ATCCCGATATCCC-CC-Aaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|6 : ATAATTGAAAAA-AAATGGGGAGC-ACG-TTAATGTT-CACTATACACATCTAAAGCATA-AATC-ACAATACTTCTAAAGTTATTCTACCT----------------TAGCC-AGTAGGTG-GTTGGTTTCGG--GACCCGATATCCC-C--------AT-ATGC--TGCCTGA
gi|6 : ATTG---T-----TA-AAAATAATAACATGTAG---------TATA-AATGGAACCCACC-ACCC-----CC--CTCAATGATTGTAAA-CATGAGTTATTT----------TTTATTTTTTTTT--CGAAATACAT-CAT-AGTAA-AATGT-TTTCATAGACATTCTAGACAATATGTCACATT--ATCTGAATCTG-AATTTGT-TGTCTTTCGATAC-ACTACTCTTGTATACAAAATTAacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaattgttaaaaataataacatgtagtataaatggaacccaccacccccctcaatgattgtaaacatgagttattttttatttttttttcgaaatacatcatagtaaaatgttttcatagacattctagacaatatgtcacattatctgaatctgaatttgttgtctttcgatacactactcttgtatacaaaattagtcaatcgttgtcactcagctagtc
gi|7 : ataattgaaaaaaaatggggagcacgttaatgttcactatacacatctaaagcataaatcacaatacttctaaagttattctaccttagccagtaggtggttggtttcgggacccgatatccccatatgctgcctgaacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaAA---AT-CAG-AAAGTC---AAAGTT-AT---TGA--TTAAAT---GA------CTTTT--ATGTC-T-CAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC---------AAACATG-GGAGTGTTTTTTAAAACAACTGATTTATGTTTTTA-ATAAATCTAAAA-TA-----AAACTTTTTGGCATCT-GCCTATTT-AACGCAATT---TCAGGGGCATGTTTTATGGGGGGAAAGGCGTTTTTTTTAA-CAAGCAGTTATTCCCCTTTGAAACT-CTTCAACGTTATA---AGGT-AGTGAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TA-TCTCACAACTGGTGGAATTTAGAAGAT-TGAACTCGCTTGAAAGCATAAGGAGCT-C-AAAACTTCCC----AACTAGTCACC--------CAAAGAAA--GTGTGAAG----------GGCATG-TCAgtcaatcgttgtcactcagctagtc
gi|8 : TGCTGATCACTGTT-GGTATGGAAACTGGTC-AAATATTATCAA--AGTTGGCTA-TTTTCCAGAATT--CAGTAGTTTTTGC-ACAAATATTCAAAG-CAACAAAT-TATTGATTGTTTTAAAATTGTATTTTTCATTTC-TAATGATAAAATAA-ATCCTA-TATTTTAATTCG-AGAGG-AAAA--TTCA-ATAATGGAC--AA-TTTGAAGGGATTTTTATAA---TT-CAA-TAAGTCTGTGAAGTT-GTGTTTAAA-TCCAAT---GA------TTTTT--AAGTC-T-TAAT-AGCCTTT--ATT----CCAT----C-AACC-TCT-------CAAAAAATA------GTTTTTTAAAACAAGTAATTTATGTTTTTC-ATAAAT-TAAAA-AAAACCCAAACTTTTGGGAATCT-GCCTATTT-Acggaataccaggccc
gi|9 : AATAGATG-ACTCTGAGTCTGAAATTGAGATACC-GTGTTTAATGTCTTTTGTGAAATTCGCAATCCATTATAACACAAATATGT---TT-------AAAATC---CATTTTTTA-TAAGATACTTTAGTTTGAT-ATACTTGAAAA----TTTGTTGACTAATT--AATTTGAAGGAGAATT--ATAATACTGAGATTACG---CTGGC---AATAAAAAAACCAAAACCAGCAAAC-ACAAAATA--CATA-ATGGAAA-TA--CCCGAGTGTAGGTCTTC-TTTATACAAT-GTACAAAGTCATAGAGCAG-TTTA-GAGGGAGGGCCTGCCCCAGGAGGCCC
Alignments
lowQualScore : 222222 1 1 111 111 111111 1111 1111 33333333 11111 111 111 1111 5555555555555 4444444444444444444444444444 111 11 555555555555555555555555 3333 111 2222222 1 4444444444444 11111 1 1 111111 111111111 55555555555555555 1 1111 2222222222 55555555555555555555555 222 1 2 11 111 11111 111 11111 444444444 2222 3333333 1 11 1 1 1 5555555555 111 111 44444444444 111 1 4444444444 111 222222 7777777777777 33333 1 1 1 2222 444444444444 3333 1 2222 1 1 11 22 11 111 222222 55555555555555555555 2222222 22 1 1 1 11 11
lowQualScore : 8 333333 99 0 0 6 6 1 99 6 99 6 6 6 1 6 6 1 0 5 77 5 77 5 000 5 5 6 6 6 000 666666 77 666 5 77 4444 2222 77 5 00000000 5 0 0 1 6 6 6 66666 6 5 111 2 1 99 7 3 6 3 6 1 111 6 6 6 3 9999 6 1 1 6 6 4444 6 1 99 0000000000000 6 6 7 7 55 1 6 3333333333333333333333333333 8 444 8 6 11 888888888888888888888888 0 88 8 1 8 0 1111 6 888 6 6 6 1111111 3 6 3 6 6 6 99 6 2 4444444444444 2 5 1 6 66666 7777 3 8 8 0 0 999999 6 1 888888888 6 66666666666666666 3 5 22 8888 5555555555 0 5 6 55555555555555555555555 1 777 8 0 0 99 0 0 11 0 111 88888 111 6 66666 666666666 3 6 888 0000 6 5555555 0 33 0 0 0 1111111111 1 666 000 00000000000 1 2 444 0 3333333333 333 0 2 888888 3333333333333 3 5 3 11111 3 5 0 6 0 1111 44 333333333333 9 0 0000 0 1111 2 3 0 0 33 9 11 3 99 33 777 444444 1 99999999999999999999 6 3333333 00 3 7 3 7 3 44 0 7 44 7777
lowQualScore : . ...... .. . . . . . .. . .. . . . . . . . . . .. . .. . ... . . . . . ... ...... .. ... . .. .... .... .. . ........ . . . . . . . ..... . . ... . . .. . . . . . . ... . . . . .... . . . . . .... . . .. ............. . . . . .. . . ............................ . ... . . .. ........................ . .. . . . . .... . ... . . . ....... . . . . . . .. . . ............. . . . . ..... .... . . . . . ...... . . ......... . ................. . . .. .... .......... . . . ....................... . ... . . . .. . . .. . ... ..... ... . ..... ......... . . ... .... . ....... . .. . . . .......... . ... ... ........... . . ... . .......... ... . . ...... ............. . . . ..... . . . . . .... .. ............ . . .... . .... . . . . .. . .. . .. .. ... ...... . .................... . ....... .. . . . . . .. . . .. ....
lowQualScore : 0 000000 44 8 0 7 7 0 22 7 22 7 7 7 0 7 7 4 1 7 99 7 99 7 000 7 7 7 7 7 000 444444 99 111 7 99 3333 1111 44 7 44444444 7 4 7 5 7 7 7 77777 7 7 777 5 7 22 3 7 7 5 7 0 777 7 7 7 2 2222 7 0 0 7 7 2222 7 5 22 0000000000000 7 7 3 3 00 5 7 8888888888888888888888888888 0 000 0 4 00 666666666666666666666666 8 88 0 4 0 8 8888 7 333 7 7 7 2222222 0 7 3 7 7 7 22 7 5 7777777777777 5 7 6 7 77777 0000 8 0 0 0 0 222222 7 7 555555555 7 00000000000000000 2 5 00 0000 8888888888 8 0 0 44444444444444444444444 0 444 0 6 4 00 8 8 00 6 777 55555 777 7 77777 333333333 5 7 222 0000 5 2222222 0 88 0 0 0 0000000000 0 555 000 00000000000 0 5 000 0 8888888888 555 2 5 888888 3333333333333 2 6 2 00000 2 5 0 0 8 2222 22 888888888888 2 8 0000 0 2222 5 2 0 0 55 8 00 2 00 88 555 555555 0 33333333333333333333 7 7777777 00 3 3 3 3 3 00 7 3 77 7777
consensus : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAAACCA-AA---A--AA-------AAAATT-------ATCTAGCTAGC-AA---TT-TATCGAA--TA--TACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNNCCCCACC-ACCC-----CC--TTTCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTT--CGAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATAC-G------TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAATCAAACATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCT--AAAAAAAAAANAAAAAC--GNAAAC-ACAAAA-A--CATACATGGAAA-TATACCCG-GTGTAG-TCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
Reference ( family-5052 ) : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAAACCA-AA---A--AA-------AAAATT-------ATCTAGCTAGC-AA---TT-TATCGAA--TA--TACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNNCCCCACC-ACCC-----CC--TTTCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTT--CGAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATAC-G------TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAATCAAACATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCT--AAAAAAAAAANAAAAAC--GNAAAC-ACAAAA-A--CATACATGGAAA-TATACCCG-GTGTAG-TCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
gi|1 : ATAAATGAGACATCTATAATAACA------TGTTTA-CAAA--TGTGCTCAAAAGTTA-AATGC-GATCATGGTTAACTATGGAAA-AGGTGAAAATATAATCAA--ATTT-GCTATTTTTCTAGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAATGGGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TA-TTTAATCTA-GGAGGAAAAAATTTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAAATCTC-CAA-TAAATCTGTAAAGTT-GT-TTTAAAGTTCAATTGAGA------GTTTTAAATGTCTT-TAAT-AACTTTT--ATT----CCAT----CTTACCTTCC---------AAAAATA-GCAATGC-TTTTAAAACAAGTCAATGATATTTTTATATCAATCT-AAA-TA-----AAACTCTTGGGAATCT-GCCTATTTAAACGCAATTTTCC--GGGGC-TGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTT-TTCCCTTTGGTAACTGCTTCAACGTAATT---AGGTAAGTAAAGGTTACATAGACAACACAAACAGT------------------TCACAACTGGT-GAATTTAGAATATGTGTACTCGCTTGAA-ACATGTGGCCCT-T-CAAAATACCT----CTCTATTCA-CCATTCGAACAAAACAACGGTGTG--G----------AGAATGCCCAGGT--AAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAACTGAG----GTGCACAAACAA-AAAG-A--AA-------AAAATT-------GTCTAGCTAGCTAA---TTGTTTTAAATCTATCTACAGA----------------TAAAGGGGGTCGAGAAA-ATATTTC-AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTCA---AATTATTGAAACCTATAG--GGAGCAATGTT-AATATTTCA-TATACAAATCTAA-GAATA-AAGCAA-AATATTT-TGA--TT-TTATACCTA----------------AGCCTAATAGGTA-GTTGGTTT--GGAAACCCGATATCCC-CCTATATGAATCATGC-GTGCCTGACATAGCCT-AA-AATG------TTAAATATTAA
gi|1 : ------TC-AGTATTCACTTCATTGTA-AAAATGATA-------G---------TATA--ATGAACCCC-CC-ACCCACCCCCC--TTTCATGCTTGTAAAAC---------TTGTAGTGTAATTTTGTTTTGATTT---GAAATAGAC-CACAAGTAATAATGA-TTTCATAG-CAT--TATACAAAGT---AC-TT--AAATGA---TG-AATTTCTCTGTC-----ATAC-AACT---TTGTTA-C-AAATTA-ATATATTGG-CGCTCATGA-TAGATCATTCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----G-CCGGTTTG-T-ATTAGACG-----T------CCAATATGGAAGAC-CC-ATTGCATCA----------CATCTTGTACTCGATATTTATATA-----C------TTTGGGCC-------------TAATATACGCACT-----TCTGA----------------TCTAATGTCTTTTGT-AAATTCGCAATCAATT---------ATTTGT---ATC-CATATAAAATCCAACATTCA-----AAT-TACTTT----TGATGATACTTGAAAAATATTTTGT-GACTAATTTGAATAAGATT-AGAATTA-AAAATATTGAG--TACGCGCCTGACT------------TAAAAAT--GG------------------ACATGGAAATTATA-CCG-GTGTAA-CCTTCATTTATATACT-GT--AA-GTCATA-AGCAGATTTAAGAGGGAG-----GTCCAATGAGCCCCtataatgtttgataagctttatctatacaaatatatcagtaattgaagttcagtattcacttcattgtaaaaatgatagtataatgaaccccccacccacccccctttcatgcttgtaaaacttgtagtgtaattttgttttgatttgaaatagaccacaagtaataatgatttcatagcattatacaaagtacttaaatgatgaatttctctgtcatacaactttgttacaaattaatatattggcgctcatgatagatcattcatcctcatgtcagtgcatgctaaattgacactgtgccggtttgtattagacgtccaatatggaagacccattgcatcacatcttgtactcgatatttatatactttgggcctaatatacgcacttctgatctaatgtcttttgtaaattcgcaatcaattatttgtatccatataaaatccaacattcaaattacttttgatgatacttgaaaaatattttgtgactaatttgaataagattagaattaaaaatattgagtacgcgcctgacttaaaaatggacatggaaattataccggtgtaaccttcatttatatactgtaagtcataagcagatttaagagggaggtccaatgagcccc
gi|10 : ataaatgagacatctataataacatgtttacaaatgtgctcaaaagttaaatgcgatcatggttaactatggaaaaggtgaaaatataatcaaatttgctatttttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatgggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatatttaatctaggaggaaaaaattttaataatggacaatttgaagtgatttttataaatctccaataaatctgtaaagttgttttaaagttcaattgagagttttaaatgtctttaataacttttattccatcttaccttccaaaaatagcaatgcttttaaaacaagtcaatgatatttttatatcaatctaaataaaactcttgggaatctgcctatttaaacgcaattttccggggctgatttatggatggaaaggcttttttcatcaagagttttccctttggtaactgcttcaacgtaattaggtaagtaaaggttacatagacaacacaaacagttcacaactggtgaatttagaatatgtgtactcgcttgaaacatgtggcccttcaaaatacctctctattcaccattcgaacaaaacaacggtgtggagaatgcccaggtaagacgtttgcaggagatggagccatgttagtacaggtgaactgaggtgcacaaacaaaaagaaaaaaattgtctagctagctaattgttttaaatctatctacagataaagggggtcgagaaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaaattattgaaacctatagggagcaatgttaatatttcatatacaaatctaagaataaagcaaaatattttgattttatacctaagcctaataggtagttggtttggaaacccgatatccccctatatgaatcatgcgtgcctgacatagcctaaaatgttaaatattaatataatgtttgataagctttatctatacaaatatatcagtaattgaagtTCAATA-TAATAAACTACTGTTTTTCAAAAATGTGCTCAAAAGTTAGAATGCTGGTCATTGTT-CTTAATGAAACAGGTG-AAATATCATCAATTGTTTGCTTA-TTTTCCGAGAATTAAGGTAGTTATAACCACAAAAACTCAAAAACAACTAAT-TATTAATTATGTTAAAATTGTATTTTTCATATC-AAATAATCAAATAG-ATCCTACCATTTT-ATTTA-AGAGGAAAAT--GTCA-ATAATGGAC--AA-ATTGAAGTAATTTTTAAAA---TT-CAA-TATATCTG
gi|11 : ACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATATAG------TTGTAAAC-AA--TACAGATGT--G-CACTCATGACTA------CCATCCTACATGTCAGACTGCATAGCTAAATATGACATCTGCTCGGA-C--GCTTGAT-ATTACATGAGATATG-ACTGTCAAAATGAAGAAA-CCAATTCCATCAGTCTCTCCCCCATCTC-TGCTCGATATTTTTATACTTGTCTTTCAGTTTGGGCC-------------TAATATATGCACTCTGAGTCTG
gi|12 : TCATATCCAAATGATAACATATGATCCTAATCTTTTGATTTAAGGAGGAAAAA--ATTATATAATGGACCTAT-TTTGAAGTAATTTTCATAA---TTGCAAATAAATCTGTGAAGTTTGTGTTTAAA-TCCAAT---CAATTTTTTTTTT--GTGTC-AATAATCAACTTTTTAATTCTATCCACAGCCC-CGCC-CCCCCCCAAAAAAAAAATAAGCAGTGCTTTTTAAAACAACT
gi|13 : -ATCATAA----AA-ACGTGAAATCCTA---AAAATCAAACGTTTAGT--TCTT-TACTGT----TGATGATACTTGAAAAATA-TATCT-GACTAATTTGAAT-TGAAC-AG-ATTGAAAAATACTACA--TACA---CTGGCT--AAAAAAAtt
gi|14 : TGCTGGGCATGGTT-ACTATGGAAACAGGTG-AAATATCATCAA--ATTTGGGTA-TTTTCCAGAAAT--GGGTGATTTTTGC-ACAAAAACTC-ACA-CAACAAAT-TATTAATTGTCTTAATATTGTATTTTT
gi|15 : CATG-TTATTAA-T---------TA----------TTTATTTATTTCT--TGAAATACATTCACAAGTAA-AATGG-TT-CATAGACAT--TAGACAATGT---ACATT--A--TGA---TT-AATTTGTCTGTC-----ATA--G------TTGTATAC-AAATTA
gi|16 : taaaTCCAAGACGTTTTGCTGGAGATAGAGCAAACTTTATCCATGTTAGTTCAGGTGAGTGTAAAAAATATAA---A--AA-------AAAATCCCCAAAAATCTAGCTAG
gi|17 : atgtgcaacataATATGCGTACTCTG------AAATTGAGATACATGT-ATT-ATGTC-TTTGT-AAATTTGCAATT-ATTA
gi|18 : AATGAGACATCTATA-TAACA------TGTTTT-CATAAATGTGCTCAAAAG
gi|19 : cg-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATTTAC--AA-TTTGAA
gi|2 : ATGAATGAGACATCTATA-TAACA------AGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-GCTATGGAAACCGGTG-AAATATAATCAA--ATTTGACTA-TTTTCCAAGAAT--GAGTAGTTTTTGC-A-AAAAAC-CAAAA-CAACAAAT-TATTAATTGTCTTACAATTGTATTTTTCAAATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTG-ATAATGGAC--AAATTTGAAGTGATTTTCATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TCTTT--ATGTC-T-TAAT-AACTTTT--AT-C---CCAT----C-AACC-TCC-------AAAAAAATA-GCAATGCTTTTTGAAACAACTAATTGATGTATTTA-ATCAATATAAAA-TA-----AAACTTTTGGGAATCTCGCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-TACACAAATAATATGGCGGGATGATTGTTCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTT-C-CAAAATACCT----CTCTATTCA-CCATTCGAAGAAAGAAA--GTGTG-A-----------GGAATG-TCAGGTCCAAGACG-TT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTACAACCCA-AA---A----------------T-------ATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTCAAACTGAAGTGGCTTCCATTCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AAT--------------ATCTAA-GCATATAAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------ACTAGCC-ATTAGGTG-GTTGGATT--G--AACCCGATATCCC-TC-ATATGTAT-ATGG-GTGTCTGCCATAGCCTAAA-AATG------TT-AATATTGACCT-----TAGAAAATGATA-------GACTAGTACATGTATAATGCCCCCC-----CCC-----CC---------CTTGT--A-C---------TT----------TTTGTTTTATTTT---GAAATACAT-CACAAGTAA-AATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCACTGTC-----ATA--G------TTGTAAAC-AAATTACAGATGT--GACACTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GACA-GGTTG-T-ATTACATG-----TATAC-GTCAAAAT-GAAG-A-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCCTACATTTTTTTTGTAATATATGCACTCTGAGTCTGAAATTGAGATAC--AT-TTTAATGTC-TTTGT-AAATTCGCAATC-ATTATAA----AATTTGT---ATCATA---AAAATCAAGCATTTATTTATAAT-TACTTT----TTATGATACTTGAAAAATA-TTTGT-GACTAATTTAAATATGAAG-AGAATT--AAAATACTGAG--TACG---CTGGCCAAAAAAAAAAAAAAAAAAA--AAAAACAACAAAA-AACCATACATGGAA---ATACCC--GTGTAG-TCTTCATTTATACACTGGTACAA-GTCATAG-GCGGATTT-AGAGG--AGGCCTGCCCCAGGAGCCCC
gi|3 : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGATCATGGTT-ACTATGGAAACAGGTG-AAATATAATCAA--ATTTGGCTA-TTTTCTAGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAAT-GGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATCTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------GTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-TACC-TTC-------CAAAAAATA-GCAATGCTTTTTAAAACAAGTCATTGATATTTTTA-ATCAATCTAAAA-TA-----AAACTCTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTTTTTCCCCTTTGGTACT-CTTCAACGTAATT---AGGT-AGTAAA-GTTACATAGA-AACACAAAC--------------A-TG-TCTCACAACTGGTGGAATTTAGAATAT-TGTACTCGCTTGAAGACATGTGGCCTT-CAAAAAATACCT----CTCTATTCACCCATTCGAACAAAACAA--GTGTG-A-----------GGAATG-CCAGGTCCAAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAAC-----TGAGTGCACAAACCA-AA---AAGAA-------AAAATT-------GTCTAGCTAGC-AATTGTT-TAT-AAA--TC--TACAGA----------------TAAAGGGGGTCGAGAAATA--TTTC-AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTC----AATTATTGAAACC-ATA---GGAGC-ATG-T-AATATTTCA-TATACAAATCTAA-GAATA-AAGC-A-AATATTT-TGA--TT-TTATACCTAGCCT---------A--A------TAGGTA-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGAAT-ATGC-GTGCCTGACATAGCCT-AA-AATGTTAAATTT-AATATTGACCC-----TT-AAGATc
gi|3 : gcATA------TT-A-TATTG---------TA-AAAATGATA-------G---------TA-ATAATGCCCCCCACCCACCC-----CCCTTTTCATGCTTGTAAA-C---------TT----------TGTGTTTTTTTTTTGTGAAATACAC-CAC-AGTAATAATGTATTTCATAGA-AT--TATACAATGT---ACATTAAA--TGA---TGAAATTTCTCTGTC-----ATAC-T------TTGT-AAC-AAATTAC---TAT--T-CGCCGATGATCA----------CTT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GCC--GGTTGATCATTA---G-----CA-AC-GTCAATATGGAAGGACCC-ATTGCATCA----------CATC--------------TTTATACTTGTC------TTTGGtttgtaagctttatctattacaaatatatcagtacattgaattcatattatattgtaaaaatgatagtaataatgccccccacccaccccccttttcatgcttgtaaactttgtgttttttttttgtgaaatacaccacagtaataatgtatttcatagaattatacaatgtacattaaatgatgaaatttctctgtcatactttgtaacaaattactattcgccgatgatcacttcatgtcagtgcatgctaaattgacactgtgccggttgatcattagcaacgtcaatatggaaggacccattgcatcacatctttatacttgtctttggct
gi|4 : gcataaatgagacatctatataacatgtttacaaaaatgtgctcaaaagttaaatgctgatcatggttactatggaaacaggtgaaatataatcaaatttggctattttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatattttaatctaggaggaaaaatttaataatggacaatttgaagtgatttttataattcaataaatctgtaaagttgtgtttaaattcaatgagttttatgtcttaataacttttattcccatctaccttccaaaaaatagcaatgctttttaaaacaagtcattgatatttttaatcaatctaaaataaaactcttgggaatctgcctatttaacgcaattcgaggggcatgatttatggatggaaaggcttttttcatcaagagtttttcccctttggtactcttcaacgtaattaggtagtaaagttacatagaaacacaaacatgtctcacaactggtggaatttagaatattgtactcgcttgaagacatgtggccttcaaaaaatacctctctattcacccattcgaacaaaacaagtgtgaggaatgccaggtccaagacgtttgcaggagatggagccatgttagtacaggtgaactgagtgcacaaaccaaaaagaaaaaattgtctagctagcaattgtttataaatctacagataaagggggtcgagaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaattattgaaaccataggagcatgtaatatttcatatacaaatctaagaataaagcaaatattttgattttatacctagcctaataggtagttggtttgaacccgatatcccccatatgaatatgcgtgcctgacatagcctaaaatgttaaatttaatattgacccttaagattttgtaagctttatctattacaaatatatcagtacattgaattcAAT---GA------TTTTT--ATGTC-T-TAAT-CACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTGAAACAACTAATTGATGTTTTTA-TTCAATATAAAAATA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATAGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATTTATAGGT-AGTAAA-GTTGCATAGC-TACACAAATAATATGGCGGGATGA-GG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTTCC-AAAAATACCT----CTCTATTCACCCATTAGAAGAAAGGAA--GTGTG-A-----------GGAATG-TCTGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTAC-AGCCA-AA---A--AAGAAAAAGAAAA-T-------ATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACTGAAATGACTTCCA-TCCCATGCATTTTAAAAAGGTTCAATTAATTATTGAAACC-ATA---GGGGC-ACG-T-AAT--------------ATCTAA-GCATATAAGT-A-TATATTT-TAA--TT-TTCTACCTAGCCCAATACTGCAA-TAGCC-ATTAct
gi|4 : -ATTAG-TGCGTTGGATT--G--AACCCGACATCCCATC-ATATATAT-ATGCCGTGTCTGACATAGCCA-AACAATG------TT-AATATTGACCT-----TA-AGATTTATA-------ctggnnnnnnnnnnnnnnnnnnnnnnnnnaaattagtgcgttggattgaacccgacatcccatcatatatatatgccgtgtctgacatagccaaacaatgttaatattgaccttaagatttataaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|5 : aatgatttttatgtcttaatcacttttattcccatccacctccaaaaaaatagcagtgctttttgaaacaactaattgatgtttttattcaatataaaaataaaacttttgggaatctgcctatttaacgcaattcgaggggcatgatttatagagggaaaggctttttttaaccaagagttattcccctttgaaactcttcaacgtcatttataggtagtaaagttgcatagctacacaaataatatggcgggatgaggtctcacaactggtggaatttagaagattgtactcgattgaagacatgtggcgttccaaaaatacctctctattcacccattagaagaaaggaagtgtgaggaatgtctggtccaagacgtttgctggagatagagccatgttagtacaggtgactgaggtgagtgtacagccaaaaaagaaaaagaaaatatctagctagcaatttatcgaataacatgtttaaagcgggtcgagaaatgttttcaactgaaatgacttccatcccatgcattttaaaaaggttcaattaattattgaaaccataggggcacgtaatatctaagcatataagtatatattttaattttctacctagcccaatactgcaatagccattactggnnnnnnnnnnnnnnnnnnnnnnnnnaa-AACGCAATT---TGAGGGCCATGCTTTATAT-GGGAAAAGC--AGTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CCACACCGTCATA---AGGT-AGTAAA-GTTACATACG-AACACAAATAATATGGCGGGATGA-TG-TCTTACAACTGGCGGATTTTAGAAGAT-TTTACTCGCTTAAAGACATTTCGCATT-C-AAAAATACCTCTCCCTCCAGTCACTCATTCAAACAAATAAA--GTGCG-AGGGCATATTACGGAATG-CCAGATCCAAGACGTTT-GCTGGACAAAGA---------------GTAAAC-GA-GTGAGTGTAGAACCCA-AAATGA--AA-------AAAAAA-------ATCTGACTAGC-AA---TT-TATTGAA--TA---ACATGTTAATAAACCTACAGTTAAAGCAGGTCGAGAAATGT-TTTC-AGTGGAAGCGGGTTCCA-ACCCATGTATTTTC-AAGGGTTC----AATTATTGAAACA-ATA---GGAGC-ACG-T-GCTGTTTCA-TATACAAATATAA-GCATA-AAGC-A-AACATTC-TGA--TT-TTCAACCTAGCCC---------A--ATCT-AT---GTG-GTTGGTTT-----ATCCCGATATCCC-CC-Aaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|6 : ATAATTGAAAAA-AAATGGGGAGC-ACG-TTAATGTT-CACTATACACATCTAAAGCATA-AATC-ACAATACTTCTAAAGTTATTCTACCT----------------TAGCC-AGTAGGTG-GTTGGTTTCGG--GACCCGATATCCC-C--------AT-ATGC--TGCCTGA
gi|6 : ATTG---T-----TA-AAAATAATAACATGTAG---------TATA-AATGGAACCCACC-ACCC-----CC--CTCAATGATTGTAAA-CATGAGTTATTT----------TTTATTTTTTTTT--CGAAATACAT-CAT-AGTAA-AATGT-TTTCATAGACATTCTAGACAATATGTCACATT--ATCTGAATCTG-AATTTGT-TGTCTTTCGATAC-ACTACTCTTGTATACAAAATTAacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaattgttaaaaataataacatgtagtataaatggaacccaccacccccctcaatgattgtaaacatgagttattttttatttttttttcgaaatacatcatagtaaaatgttttcatagacattctagacaatatgtcacattatctgaatctgaatttgttgtctttcgatacactactcttgtatacaaaattagtcaatcgttgtcactcagctagtc
gi|7 : ataattgaaaaaaaatggggagcacgttaatgttcactatacacatctaaagcataaatcacaatacttctaaagttattctaccttagccagtaggtggttggtttcgggacccgatatccccatatgctgcctgaacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaAA---AT-CAG-AAAGTC---AAAGTT-AT---TGA--TTAAAT---GA------CTTTT--ATGTC-T-CAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC---------AAACATG-GGAGTGTTTTTTAAAACAACTGATTTATGTTTTTA-ATAAATCTAAAA-TA-----AAACTTTTTGGCATCT-GCCTATTT-AACGCAATT---TCAGGGGCATGTTTTATGGGGGGAAAGGCGTTTTTTTTAA-CAAGCAGTTATTCCCCTTTGAAACT-CTTCAACGTTATA---AGGT-AGTGAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TA-TCTCACAACTGGTGGAATTTAGAAGAT-TGAACTCGCTTGAAAGCATAAGGAGCT-C-AAAACTTCCC----AACTAGTCACC--------CAAAGAAA--GTGTGAAG----------GGCATG-TCAgtcaatcgttgtcactcagctagtc
gi|8 : TGCTGATCACTGTT-GGTATGGAAACTGGTC-AAATATTATCAA--AGTTGGCTA-TTTTCCAGAATT--CAGTAGTTTTTGC-ACAAATATTCAAAG-CAACAAAT-TATTGATTGTTTTAAAATTGTATTTTTCATTTC-TAATGATAAAATAA-ATCCTA-TATTTTAATTCG-AGAGG-AAAA--TTCA-ATAATGGAC--AA-TTTGAAGGGATTTTTATAA---TT-CAA-TAAGTCTGTGAAGTT-GTGTTTAAA-TCCAAT---GA------TTTTT--AAGTC-T-TAAT-AGCCTTT--ATT----CCAT----C-AACC-TCT-------CAAAAAATA------GTTTTTTAAAACAAGTAATTTATGTTTTTC-ATAAAT-TAAAA-AAAACCCAAACTTTTGGGAATCT-GCCTATTT-Acggaataccaggccc
gi|9 : AATAGATG-ACTCTGAGTCTGAAATTGAGATACC-GTGTTTAATGTCTTTTGTGAAATTCGCAATCCATTATAACACAAATATGT---TT-------AAAATC---CATTTTTTA-TAAGATACTTTAGTTTGAT-ATACTTGAAAA----TTTGTTGACTAATT--AATTTGAAGGAGAATT--ATAATACTGAGATTACG---CTGGC---AATAAAAAAACCAAAACCAGCAAAC-ACAAAATA--CATA-ATGGAAA-TA--CCCGAGTGTAGGTCTTC-TTTATACAAT-GTACAAAGTCATAGAGCAG-TTTA-GAGGGAGGGCCTGCCCCAGGAGGCCC
Alignments
lowQualScore : 222222 1 1 111 111 111111 1111 1111 33333333 11111 111 111 1111 5555555555555 4444444444444444444444444444 111 11 555555555555555555555555 3333 111 2222222 1 4444444444444 11111 1 1 111111 111111111 55555555555555555 1 1111 2222222222 55555555555555555555555 222 1 2 11 111 11111 111 11111 444444444 2222 3333333 1 11 1 1 1 5555555555 111 111 44444444444 111 1 4444444444 111 222222 7777777777777 33333 1 1 1 2222 444444444444 3333 1 2222 1 1 11 22 11 111 222222 55555555555555555555 2222222 22 1 1 1 11 11
lowQualScore : 8 333333 99 0 0 6 6 1 99 6 99 6 6 6 1 6 6 1 0 5 77 5 77 5 000 5 5 6 6 6 000 666666 77 666 5 77 4444 2222 77 5 00000000 5 0 0 1 6 6 6 66666 6 5 111 2 1 99 7 3 6 3 6 1 111 6 6 6 3 9999 6 1 1 6 6 4444 6 1 99 0000000000000 6 6 7 7 55 1 6 3333333333333333333333333333 8 444 8 6 11 888888888888888888888888 0 88 8 1 8 0 1111 6 888 6 6 6 1111111 3 6 3 6 6 6 99 6 2 4444444444444 2 5 1 6 66666 7777 3 8 8 0 0 999999 6 1 888888888 6 66666666666666666 3 5 22 8888 5555555555 0 5 6 55555555555555555555555 1 777 8 0 0 99 0 0 11 0 111 88888 111 6 66666 666666666 3 6 888 0000 6 5555555 0 33 0 0 0 1111111111 1 666 000 00000000000 1 2 444 0 3333333333 333 0 2 888888 3333333333333 3 5 3 11111 3 5 0 6 0 1111 44 333333333333 9 0 0000 0 1111 2 3 0 0 33 9 11 3 99 33 777 444444 1 99999999999999999999 6 3333333 00 3 7 3 7 3 44 0 7 44 7777
lowQualScore : . ...... .. . . . . . .. . .. . . . . . . . . . .. . .. . ... . . . . . ... ...... .. ... . .. .... .... .. . ........ . . . . . . . ..... . . ... . . .. . . . . . . ... . . . . .... . . . . . .... . . .. ............. . . . . .. . . ............................ . ... . . .. ........................ . .. . . . . .... . ... . . . ....... . . . . . . .. . . ............. . . . . ..... .... . . . . . ...... . . ......... . ................. . . .. .... .......... . . . ....................... . ... . . . .. . . .. . ... ..... ... . ..... ......... . . ... .... . ....... . .. . . . .......... . ... ... ........... . . ... . .......... ... . . ...... ............. . . . ..... . . . . . .... .. ............ . . .... . .... . . . . .. . .. . .. .. ... ...... . .................... . ....... .. . . . . . .. . . .. ....
lowQualScore : 0 000000 44 8 0 7 7 0 22 7 22 7 7 7 0 7 7 4 1 7 99 7 99 7 000 7 7 7 7 7 000 444444 99 111 7 99 3333 1111 44 7 44444444 7 4 7 5 7 7 7 77777 7 7 777 5 7 22 3 7 7 5 7 0 777 7 7 7 2 2222 7 0 0 7 7 2222 7 5 22 0000000000000 7 7 3 3 00 5 7 8888888888888888888888888888 0 000 0 4 00 666666666666666666666666 8 88 0 4 0 8 8888 7 333 7 7 7 2222222 0 7 3 7 7 7 22 7 5 7777777777777 5 7 6 7 77777 0000 8 0 0 0 0 222222 7 7 555555555 7 00000000000000000 2 5 00 0000 8888888888 8 0 0 44444444444444444444444 0 444 0 6 4 00 8 8 00 6 777 55555 777 7 77777 333333333 5 7 222 0000 5 2222222 0 88 0 0 0 0000000000 0 555 000 00000000000 0 5 000 0 8888888888 555 2 5 888888 3333333333333 2 6 2 00000 2 5 0 0 8 2222 22 888888888888 2 8 0000 0 2222 5 2 0 0 55 8 00 2 00 88 555 555555 0 33333333333333333333 7 7777777 00 3 3 3 3 3 00 7 3 77 7777
consensus : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAAACCA-AA---A--AA-------AAAATT-------ATCTAGCTAGC-AA---TT-TATCGAA--TA--TACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNNCCCCACC-ACCC-----CC--TTTCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTT--CGAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATAC-G------TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAATCAAACATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCT--AAAAAAAAAANAAAAAC--GNAAAC-ACAAAA-A--CATACATGGAAA-TATACCCG-GTGTAG-TCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
Reference ( family-5052 ) : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAAACCA-AA---A--AA-------AAAATT-------ATCTAGCTAGC-AA---TT-TATCGAA--TA--TACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNNCCCCACC-ACCC-----CC--TTTCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTT--CGAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATAC-G------TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAATCAAACATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCT--AAAAAAAAAANAAAAAC--GNAAAC-ACAAAA-A--CATACATGGAAA-TATACCCG-GTGTAG-TCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
gi|1 : ATAAATGAGACATCTATAATAACA------TGTTTA-CAAA--TGTGCTCAAAAGTTA-AATGC-GATCATGGTTAACTATGGAAA-AGGTGAAAATATAATCAA--ATTT-GCTATTTTTCTAGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAATGGGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TA-TTTAATCTA-GGAGGAAAAAATTTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAAATCTC-CAA-TAAATCTGTAAAGTT-GT-TTTAAAGTTCAATTGAGA------GTTTTAAATGTCTT-TAAT-AACTTTT--ATT----CCAT----CTTACCTTCC---------AAAAATA-GCAATGC-TTTTAAAACAAGTCAATGATATTTTTATATCAATCT-AAA-TA-----AAACTCTTGGGAATCT-GCCTATTTAAACGCAATTTTCC--GGGGC-TGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTT-TTCCCTTTGGTAACTGCTTCAACGTAATT---AGGTAAGTAAAGGTTACATAGACAACACAAACAGT------------------TCACAACTGGT-GAATTTAGAATATGTGTACTCGCTTGAA-ACATGTGGCCCT-T-CAAAATACCT----CTCTATTCA-CCATTCGAACAAAACAACGGTGTG--G----------AGAATGCCCAGGT--AAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAACTGAG----GTGCACAAACAA-AAAG-A--AA-------AAAATT-------GTCTAGCTAGCTAA---TTGTTTTAAATCTATCTACAGA----------------TAAAGGGGGTCGAGAAA-ATATTTC-AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTCA---AATTATTGAAACCTATAG--GGAGCAATGTT-AATATTTCA-TATACAAATCTAA-GAATA-AAGCAA-AATATTT-TGA--TT-TTATACCTA----------------AGCCTAATAGGTA-GTTGGTTT--GGAAACCCGATATCCC-CCTATATGAATCATGC-GTGCCTGACATAGCCT-AA-AATG------TTAAATATTAA
gi|1 : ------TC-AGTATTCACTTCATTGTA-AAAATGATA-------G---------TATA--ATGAACCCC-CC-ACCCACCCCCC--TTTCATGCTTGTAAAAC---------TTGTAGTGTAATTTTGTTTTGATTT---GAAATAGAC-CACAAGTAATAATGA-TTTCATAG-CAT--TATACAAAGT---AC-TT--AAATGA---TG-AATTTCTCTGTC-----ATAC-AACT---TTGTTA-C-AAATTA-ATATATTGG-CGCTCATGA-TAGATCATTCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----G-CCGGTTTG-T-ATTAGACG-----T------CCAATATGGAAGAC-CC-ATTGCATCA----------CATCTTGTACTCGATATTTATATA-----C------TTTGGGCC-------------TAATATACGCACT-----TCTGA----------------TCTAATGTCTTTTGT-AAATTCGCAATCAATT---------ATTTGT---ATC-CATATAAAATCCAACATTCA-----AAT-TACTTT----TGATGATACTTGAAAAATATTTTGT-GACTAATTTGAATAAGATT-AGAATTA-AAAATATTGAG--TACGCGCCTGACT------------TAAAAAT--GG------------------ACATGGAAATTATA-CCG-GTGTAA-CCTTCATTTATATACT-GT--AA-GTCATA-AGCAGATTTAAGAGGGAG-----GTCCAATGAGCCCCtataatgtttgataagctttatctatacaaatatatcagtaattgaagttcagtattcacttcattgtaaaaatgatagtataatgaaccccccacccacccccctttcatgcttgtaaaacttgtagtgtaattttgttttgatttgaaatagaccacaagtaataatgatttcatagcattatacaaagtacttaaatgatgaatttctctgtcatacaactttgttacaaattaatatattggcgctcatgatagatcattcatcctcatgtcagtgcatgctaaattgacactgtgccggtttgtattagacgtccaatatggaagacccattgcatcacatcttgtactcgatatttatatactttgggcctaatatacgcacttctgatctaatgtcttttgtaaattcgcaatcaattatttgtatccatataaaatccaacattcaaattacttttgatgatacttgaaaaatattttgtgactaatttgaataagattagaattaaaaatattgagtacgcgcctgacttaaaaatggacatggaaattataccggtgtaaccttcatttatatactgtaagtcataagcagatttaagagggaggtccaatgagcccc
gi|10 : ataaatgagacatctataataacatgtttacaaatgtgctcaaaagttaaatgcgatcatggttaactatggaaaaggtgaaaatataatcaaatttgctatttttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatgggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatatttaatctaggaggaaaaaattttaataatggacaatttgaagtgatttttataaatctccaataaatctgtaaagttgttttaaagttcaattgagagttttaaatgtctttaataacttttattccatcttaccttccaaaaatagcaatgcttttaaaacaagtcaatgatatttttatatcaatctaaataaaactcttgggaatctgcctatttaaacgcaattttccggggctgatttatggatggaaaggcttttttcatcaagagttttccctttggtaactgcttcaacgtaattaggtaagtaaaggttacatagacaacacaaacagttcacaactggtgaatttagaatatgtgtactcgcttgaaacatgtggcccttcaaaatacctctctattcaccattcgaacaaaacaacggtgtggagaatgcccaggtaagacgtttgcaggagatggagccatgttagtacaggtgaactgaggtgcacaaacaaaaagaaaaaaattgtctagctagctaattgttttaaatctatctacagataaagggggtcgagaaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaaattattgaaacctatagggagcaatgttaatatttcatatacaaatctaagaataaagcaaaatattttgattttatacctaagcctaataggtagttggtttggaaacccgatatccccctatatgaatcatgcgtgcctgacatagcctaaaatgttaaatattaatataatgtttgataagctttatctatacaaatatatcagtaattgaagtTCAATA-TAATAAACTACTGTTTTTCAAAAATGTGCTCAAAAGTTAGAATGCTGGTCATTGTT-CTTAATGAAACAGGTG-AAATATCATCAATTGTTTGCTTA-TTTTCCGAGAATTAAGGTAGTTATAACCACAAAAACTCAAAAACAACTAAT-TATTAATTATGTTAAAATTGTATTTTTCATATC-AAATAATCAAATAG-ATCCTACCATTTT-ATTTA-AGAGGAAAAT--GTCA-ATAATGGAC--AA-ATTGAAGTAATTTTTAAAA---TT-CAA-TATATCTG
gi|11 : ACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATATAG------TTGTAAAC-AA--TACAGATGT--G-CACTCATGACTA------CCATCCTACATGTCAGACTGCATAGCTAAATATGACATCTGCTCGGA-C--GCTTGAT-ATTACATGAGATATG-ACTGTCAAAATGAAGAAA-CCAATTCCATCAGTCTCTCCCCCATCTC-TGCTCGATATTTTTATACTTGTCTTTCAGTTTGGGCC-------------TAATATATGCACTCTGAGTCTG
gi|12 : TCATATCCAAATGATAACATATGATCCTAATCTTTTGATTTAAGGAGGAAAAA--ATTATATAATGGACCTAT-TTTGAAGTAATTTTCATAA---TTGCAAATAAATCTGTGAAGTTTGTGTTTAAA-TCCAAT---CAATTTTTTTTTT--GTGTC-AATAATCAACTTTTTAATTCTATCCACAGCCC-CGCC-CCCCCCCAAAAAAAAAATAAGCAGTGCTTTTTAAAACAACT
gi|13 : -ATCATAA----AA-ACGTGAAATCCTA---AAAATCAAACGTTTAGT--TCTT-TACTGT----TGATGATACTTGAAAAATA-TATCT-GACTAATTTGAAT-TGAAC-AG-ATTGAAAAATACTACA--TACA---CTGGCT--AAAAAAAtt
gi|14 : TGCTGGGCATGGTT-ACTATGGAAACAGGTG-AAATATCATCAA--ATTTGGGTA-TTTTCCAGAAAT--GGGTGATTTTTGC-ACAAAAACTC-ACA-CAACAAAT-TATTAATTGTCTTAATATTGTATTTTT
gi|15 : CATG-TTATTAA-T---------TA----------TTTATTTATTTCT--TGAAATACATTCACAAGTAA-AATGG-TT-CATAGACAT--TAGACAATGT---ACATT--A--TGA---TT-AATTTGTCTGTC-----ATA--G------TTGTATAC-AAATTA
gi|16 : taaaTCCAAGACGTTTTGCTGGAGATAGAGCAAACTTTATCCATGTTAGTTCAGGTGAGTGTAAAAAATATAA---A--AA-------AAAATCCCCAAAAATCTAGCTAG
gi|17 : atgtgcaacataATATGCGTACTCTG------AAATTGAGATACATGT-ATT-ATGTC-TTTGT-AAATTTGCAATT-ATTA
gi|18 : AATGAGACATCTATA-TAACA------TGTTTT-CATAAATGTGCTCAAAAG
gi|19 : cg-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATTTAC--AA-TTTGAA
gi|2 : ATGAATGAGACATCTATA-TAACA------AGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-GCTATGGAAACCGGTG-AAATATAATCAA--ATTTGACTA-TTTTCCAAGAAT--GAGTAGTTTTTGC-A-AAAAAC-CAAAA-CAACAAAT-TATTAATTGTCTTACAATTGTATTTTTCAAATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTG-ATAATGGAC--AAATTTGAAGTGATTTTCATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TCTTT--ATGTC-T-TAAT-AACTTTT--AT-C---CCAT----C-AACC-TCC-------AAAAAAATA-GCAATGCTTTTTGAAACAACTAATTGATGTATTTA-ATCAATATAAAA-TA-----AAACTTTTGGGAATCTCGCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-TACACAAATAATATGGCGGGATGATTGTTCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTT-C-CAAAATACCT----CTCTATTCA-CCATTCGAAGAAAGAAA--GTGTG-A-----------GGAATG-TCAGGTCCAAGACG-TT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTACAACCCA-AA---A----------------T-------ATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTCAAACTGAAGTGGCTTCCATTCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AAT--------------ATCTAA-GCATATAAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------ACTAGCC-ATTAGGTG-GTTGGATT--G--AACCCGATATCCC-TC-ATATGTAT-ATGG-GTGTCTGCCATAGCCTAAA-AATG------TT-AATATTGACCT-----TAGAAAATGATA-------GACTAGTACATGTATAATGCCCCCC-----CCC-----CC---------CTTGT--A-C---------TT----------TTTGTTTTATTTT---GAAATACAT-CACAAGTAA-AATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCACTGTC-----ATA--G------TTGTAAAC-AAATTACAGATGT--GACACTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GACA-GGTTG-T-ATTACATG-----TATAC-GTCAAAAT-GAAG-A-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCCTACATTTTTTTTGTAATATATGCACTCTGAGTCTGAAATTGAGATAC--AT-TTTAATGTC-TTTGT-AAATTCGCAATC-ATTATAA----AATTTGT---ATCATA---AAAATCAAGCATTTATTTATAAT-TACTTT----TTATGATACTTGAAAAATA-TTTGT-GACTAATTTAAATATGAAG-AGAATT--AAAATACTGAG--TACG---CTGGCCAAAAAAAAAAAAAAAAAAA--AAAAACAACAAAA-AACCATACATGGAA---ATACCC--GTGTAG-TCTTCATTTATACACTGGTACAA-GTCATAG-GCGGATTT-AGAGG--AGGCCTGCCCCAGGAGCCCC
gi|3 : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGATCATGGTT-ACTATGGAAACAGGTG-AAATATAATCAA--ATTTGGCTA-TTTTCTAGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAAT-GGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATCTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------GTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-TACC-TTC-------CAAAAAATA-GCAATGCTTTTTAAAACAAGTCATTGATATTTTTA-ATCAATCTAAAA-TA-----AAACTCTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTTTTTCCCCTTTGGTACT-CTTCAACGTAATT---AGGT-AGTAAA-GTTACATAGA-AACACAAAC--------------A-TG-TCTCACAACTGGTGGAATTTAGAATAT-TGTACTCGCTTGAAGACATGTGGCCTT-CAAAAAATACCT----CTCTATTCACCCATTCGAACAAAACAA--GTGTG-A-----------GGAATG-CCAGGTCCAAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAAC-----TGAGTGCACAAACCA-AA---AAGAA-------AAAATT-------GTCTAGCTAGC-AATTGTT-TAT-AAA--TC--TACAGA----------------TAAAGGGGGTCGAGAAATA--TTTC-AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTC----AATTATTGAAACC-ATA---GGAGC-ATG-T-AATATTTCA-TATACAAATCTAA-GAATA-AAGC-A-AATATTT-TGA--TT-TTATACCTAGCCT---------A--A------TAGGTA-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGAAT-ATGC-GTGCCTGACATAGCCT-AA-AATGTTAAATTT-AATATTGACCC-----TT-AAGATc
gi|3 : gcATA------TT-A-TATTG---------TA-AAAATGATA-------G---------TA-ATAATGCCCCCCACCCACCC-----CCCTTTTCATGCTTGTAAA-C---------TT----------TGTGTTTTTTTTTTGTGAAATACAC-CAC-AGTAATAATGTATTTCATAGA-AT--TATACAATGT---ACATTAAA--TGA---TGAAATTTCTCTGTC-----ATAC-T------TTGT-AAC-AAATTAC---TAT--T-CGCCGATGATCA----------CTT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GCC--GGTTGATCATTA---G-----CA-AC-GTCAATATGGAAGGACCC-ATTGCATCA----------CATC--------------TTTATACTTGTC------TTTGGtttgtaagctttatctattacaaatatatcagtacattgaattcatattatattgtaaaaatgatagtaataatgccccccacccaccccccttttcatgcttgtaaactttgtgttttttttttgtgaaatacaccacagtaataatgtatttcatagaattatacaatgtacattaaatgatgaaatttctctgtcatactttgtaacaaattactattcgccgatgatcacttcatgtcagtgcatgctaaattgacactgtgccggttgatcattagcaacgtcaatatggaaggacccattgcatcacatctttatacttgtctttggct
gi|4 : gcataaatgagacatctatataacatgtttacaaaaatgtgctcaaaagttaaatgctgatcatggttactatggaaacaggtgaaatataatcaaatttggctattttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatattttaatctaggaggaaaaatttaataatggacaatttgaagtgatttttataattcaataaatctgtaaagttgtgtttaaattcaatgagttttatgtcttaataacttttattcccatctaccttccaaaaaatagcaatgctttttaaaacaagtcattgatatttttaatcaatctaaaataaaactcttgggaatctgcctatttaacgcaattcgaggggcatgatttatggatggaaaggcttttttcatcaagagtttttcccctttggtactcttcaacgtaattaggtagtaaagttacatagaaacacaaacatgtctcacaactggtggaatttagaatattgtactcgcttgaagacatgtggccttcaaaaaatacctctctattcacccattcgaacaaaacaagtgtgaggaatgccaggtccaagacgtttgcaggagatggagccatgttagtacaggtgaactgagtgcacaaaccaaaaagaaaaaattgtctagctagcaattgtttataaatctacagataaagggggtcgagaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaattattgaaaccataggagcatgtaatatttcatatacaaatctaagaataaagcaaatattttgattttatacctagcctaataggtagttggtttgaacccgatatcccccatatgaatatgcgtgcctgacatagcctaaaatgttaaatttaatattgacccttaagattttgtaagctttatctattacaaatatatcagtacattgaattcAAT---GA------TTTTT--ATGTC-T-TAAT-CACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTGAAACAACTAATTGATGTTTTTA-TTCAATATAAAAATA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATAGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATTTATAGGT-AGTAAA-GTTGCATAGC-TACACAAATAATATGGCGGGATGA-GG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTTCC-AAAAATACCT----CTCTATTCACCCATTAGAAGAAAGGAA--GTGTG-A-----------GGAATG-TCTGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTAC-AGCCA-AA---A--AAGAAAAAGAAAA-T-------ATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACTGAAATGACTTCCA-TCCCATGCATTTTAAAAAGGTTCAATTAATTATTGAAACC-ATA---GGGGC-ACG-T-AAT--------------ATCTAA-GCATATAAGT-A-TATATTT-TAA--TT-TTCTACCTAGCCCAATACTGCAA-TAGCC-ATTAct
gi|4 : -ATTAG-TGCGTTGGATT--G--AACCCGACATCCCATC-ATATATAT-ATGCCGTGTCTGACATAGCCA-AACAATG------TT-AATATTGACCT-----TA-AGATTTATA-------ctggnnnnnnnnnnnnnnnnnnnnnnnnnaaattagtgcgttggattgaacccgacatcccatcatatatatatgccgtgtctgacatagccaaacaatgttaatattgaccttaagatttataaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|5 : aatgatttttatgtcttaatcacttttattcccatccacctccaaaaaaatagcagtgctttttgaaacaactaattgatgtttttattcaatataaaaataaaacttttgggaatctgcctatttaacgcaattcgaggggcatgatttatagagggaaaggctttttttaaccaagagttattcccctttgaaactcttcaacgtcatttataggtagtaaagttgcatagctacacaaataatatggcgggatgaggtctcacaactggtggaatttagaagattgtactcgattgaagacatgtggcgttccaaaaatacctctctattcacccattagaagaaaggaagtgtgaggaatgtctggtccaagacgtttgctggagatagagccatgttagtacaggtgactgaggtgagtgtacagccaaaaaagaaaaagaaaatatctagctagcaatttatcgaataacatgtttaaagcgggtcgagaaatgttttcaactgaaatgacttccatcccatgcattttaaaaaggttcaattaattattgaaaccataggggcacgtaatatctaagcatataagtatatattttaattttctacctagcccaatactgcaatagccattactggnnnnnnnnnnnnnnnnnnnnnnnnnaa-AACGCAATT---TGAGGGCCATGCTTTATAT-GGGAAAAGC--AGTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CCACACCGTCATA---AGGT-AGTAAA-GTTACATACG-AACACAAATAATATGGCGGGATGA-TG-TCTTACAACTGGCGGATTTTAGAAGAT-TTTACTCGCTTAAAGACATTTCGCATT-C-AAAAATACCTCTCCCTCCAGTCACTCATTCAAACAAATAAA--GTGCG-AGGGCATATTACGGAATG-CCAGATCCAAGACGTTT-GCTGGACAAAGA---------------GTAAAC-GA-GTGAGTGTAGAACCCA-AAATGA--AA-------AAAAAA-------ATCTGACTAGC-AA---TT-TATTGAA--TA---ACATGTTAATAAACCTACAGTTAAAGCAGGTCGAGAAATGT-TTTC-AGTGGAAGCGGGTTCCA-ACCCATGTATTTTC-AAGGGTTC----AATTATTGAAACA-ATA---GGAGC-ACG-T-GCTGTTTCA-TATACAAATATAA-GCATA-AAGC-A-AACATTC-TGA--TT-TTCAACCTAGCCC---------A--ATCT-AT---GTG-GTTGGTTT-----ATCCCGATATCCC-CC-Aaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|6 : ATAATTGAAAAA-AAATGGGGAGC-ACG-TTAATGTT-CACTATACACATCTAAAGCATA-AATC-ACAATACTTCTAAAGTTATTCTACCT----------------TAGCC-AGTAGGTG-GTTGGTTTCGG--GACCCGATATCCC-C--------AT-ATGC--TGCCTGA
gi|6 : ATTG---T-----TA-AAAATAATAACATGTAG---------TATA-AATGGAACCCACC-ACCC-----CC--CTCAATGATTGTAAA-CATGAGTTATTT----------TTTATTTTTTTTT--CGAAATACAT-CAT-AGTAA-AATGT-TTTCATAGACATTCTAGACAATATGTCACATT--ATCTGAATCTG-AATTTGT-TGTCTTTCGATAC-ACTACTCTTGTATACAAAATTAacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaattgttaaaaataataacatgtagtataaatggaacccaccacccccctcaatgattgtaaacatgagttattttttatttttttttcgaaatacatcatagtaaaatgttttcatagacattctagacaatatgtcacattatctgaatctgaatttgttgtctttcgatacactactcttgtatacaaaattagtcaatcgttgtcactcagctagtc
gi|7 : ataattgaaaaaaaatggggagcacgttaatgttcactatacacatctaaagcataaatcacaatacttctaaagttattctaccttagccagtaggtggttggtttcgggacccgatatccccatatgctgcctgaacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaAA---AT-CAG-AAAGTC---AAAGTT-AT---TGA--TTAAAT---GA------CTTTT--ATGTC-T-CAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC---------AAACATG-GGAGTGTTTTTTAAAACAACTGATTTATGTTTTTA-ATAAATCTAAAA-TA-----AAACTTTTTGGCATCT-GCCTATTT-AACGCAATT---TCAGGGGCATGTTTTATGGGGGGAAAGGCGTTTTTTTTAA-CAAGCAGTTATTCCCCTTTGAAACT-CTTCAACGTTATA---AGGT-AGTGAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TA-TCTCACAACTGGTGGAATTTAGAAGAT-TGAACTCGCTTGAAAGCATAAGGAGCT-C-AAAACTTCCC----AACTAGTCACC--------CAAAGAAA--GTGTGAAG----------GGCATG-TCAgtcaatcgttgtcactcagctagtc
gi|8 : TGCTGATCACTGTT-GGTATGGAAACTGGTC-AAATATTATCAA--AGTTGGCTA-TTTTCCAGAATT--CAGTAGTTTTTGC-ACAAATATTCAAAG-CAACAAAT-TATTGATTGTTTTAAAATTGTATTTTTCATTTC-TAATGATAAAATAA-ATCCTA-TATTTTAATTCG-AGAGG-AAAA--TTCA-ATAATGGAC--AA-TTTGAAGGGATTTTTATAA---TT-CAA-TAAGTCTGTGAAGTT-GTGTTTAAA-TCCAAT---GA------TTTTT--AAGTC-T-TAAT-AGCCTTT--ATT----CCAT----C-AACC-TCT-------CAAAAAATA------GTTTTTTAAAACAAGTAATTTATGTTTTTC-ATAAAT-TAAAA-AAAACCCAAACTTTTGGGAATCT-GCCTATTT-Acggaataccaggccc
gi|9 : AATAGATG-ACTCTGAGTCTGAAATTGAGATACC-GTGTTTAATGTCTTTTGTGAAATTCGCAATCCATTATAACACAAATATGT---TT-------AAAATC---CATTTTTTA-TAAGATACTTTAGTTTGAT-ATACTTGAAAA----TTTGTTGACTAATT--AATTTGAAGGAGAATT--ATAATACTGAGATTACG---CTGGC---AATAAAAAAACCAAAACCAGCAAAC-ACAAAATA--CATA-ATGGAAA-TA--CCCGAGTGTAGGTCTTC-TTTATACAAT-GTACAAAGTCATAGAGCAG-TTTA-GAGGGAGGGCCTGCCCCAGGAGGCCC
blockSeqs : . AACTAC TT G . . C TT . TA C A . A C G C A . T CT A . G A T G . . ATTTTT . AA C TA CTAT AGCC C . CCCCAAAA A A . A A AACCC C . . G A GT A C C A . C TAT . . . A TTGT . G G C A CTCC C A . AGGGCATATTAC . T A T GG A T AAAAAAATCCCCAAAA . TTG . C . ACATGTTAATAAACCTACAGT T A C T AATT . TGG . . T ATTTCA A A T . C C AG A G CAATACTGCAAT G . T C CGG ATC T . C A C TTAAAT . G ACCT G GACTAGTACA T T CC ACCC CCCTT C T CATGAGTTATTT T TGT T A T TA TC GTC AAA ATC A TTTCG CACTACTC A A CAG GA C C A AC A A T CTCGGAC C ATC CAT AGATATGACT A G GAC A GTCTCTCCCC TC C TTTCAG TACATTTTTTTTG C A A ATGT A T G C CACA TT GAAATCCTA A TTTA A AGTT G A . T TG A GG A GA AT . CAAAAA A AAAAAACAACAAAAAAC C ATAC GA G A G A A GA A A GAGG
blockSeqs : . . T . . . C . . . . . . A . . A . . . . . . . . . G . . . . T . . C . A . A . C . C . . . . . G A . A T . T . A . . . . A TG . G C . . . C C . AAG . . A T GG C . AAAGAAAAAGAAAAT . . . C . ACATGTT T . T . AATT . . . . . GTTTCA A . T . . . . . G CACT G . T . G TC A . . . . . . A ACCC . ACATGTAG T T CC ACC CCC C A TTA A T . A . G . . ATC . . . TAG A . CAG G C C . . . . . TGACA G AT CAT TATAC A G AA . . TC C . . T A A CGTG A . . . . TA ATCATA A TTA . . G A . . TA T C A . . . TAAA C CCAGCAAACACAAAATA . ATAC . . . . A . G . A AG
blockSeqs : . . A . . . A . . . . . . C . . . . . . . . . . . . G . . . . T . . C . T . C . A . A . . . . . G A . A C . A . C . . . . A GG . G G . . . C G . A . . A T GG A . ATGAAAAAAAAA . . . T . ACATGTT T . C . . . . . . . GTTCAC C . . . . . . . G TA T . T . G CC T . . . . . . A ACCT . G . . GA . CC A A CTT T C . . . T . . A . . . CT A . C T T . . . . . . TGCC G T . CAAC T . A . . . C . C A A AT . . . . . A TT . GT . . . . . . . . G . . . . AAT
blockSeqs : . . A . . A . . . . . . C . . . . . . . . . . . . G . . . . T . . C . C . A . G . C . . . . . G G . A C . A . C . . . . A TG . G A . . . C A . A . . . . G G . AAGAAAAAATT . . . . . TACAGA . . G . . . . . . . . . . . . . . . . G CA G . T . G CC . . . . . A T . . . CTT T . . . . T . . A . . . G A . . . .
blockSeqs : . . T . . . . . . A . . . . . . . . . . . . . . . . . T . . C . C . C . A . . . . . . . C . . . . . A . T . . . . . TA . A G . . . . A . A . . . . . C . AT . . . . . . . . . . . . . . . T . . G . . C . . . . . . A . . . G . .
blockSeqs : . . . . . . . . . . . . T . . . . A . . . . . .
blockSeqCons : ** *** *** ** T** C*** C* N******* *** TG** ** GG AGAAAAAAAAAT**************** ** ACATGTT***************** T* **** *** CAT********** G**** CC** ACCT***** CTT******************** C** A**** CAN******
originalCons : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-CACC-TCC-------AAAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAAACCA-AA---A--AA-------AAAATT-------ATCTAGCTAGC-AA---TT-TATCGAA--TA--TACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNNCCCCACC-ACCC-----CC--TTTCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTT--CGAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATAC-G------TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAATCAAACATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCT--AAAAAAAAAANAAAAAC--GNAAAC-ACAAAA-A--CATACATGGAAA-TATACCCG-GTGTAG-TCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
finalCons : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTCT--TAAT-AACTTTT--ATTC---CCAT----CC-ACC-TCCN-------AAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-AACACAAATAATATGGCGGGATGATG--TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAAACCA-AAAGAAAAAAAAAT----------------ATCTAGCTAGC-AA---TT-TATCGAA--TAACATGTT-----------------TAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTC----AATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCCAT----------AGCC-ATTAGGTG-GTTGGTTTG----AACCCGATATCCCCC--ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNNCCCCACC-ACCC-----CC--TTTCATGCTTGTAAACTT--------------------TTTGTTTTTTTTTC--GAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATTA----TGA---TG-AATTTCTCTGTC-----ATACAN------TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAATCAAACATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCT--AAAAAAAAAANAAAAAC--GNAAAC-ACAAAA-A--CATACATGGAAA-TATACCCG-GTGTAG-TCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
Alignments
lowQualScore : 222222 1 1 111 111 111111 1111 1111 222222222 11111 111 111 1111 5555555555555 111 11111 111 11 222 5555555555555555 4444 111 2222222 1 4444444444444 11111 1 1 111111 111111111 55555555555555555 1 1111 2222222222 55555555555555555555555 222 1 2 11 111 11111 111 11111 33333333333 2222 3333333 1 11 1 1 1 5555555555 111 111 44444444444 111 1 4444444444 111 222222 7777777777777 33333 1 1 1 2222 444444444444 3333 1 2222 1 1 11 22 11 111 222222 55555555555555555555 2222222 22 1 1 1 11 11
lowQualScore : 8 333333 99 0 0 6 6 1 99 6 99 6 6 6 1 6 6 1 0 5 77 5 77 5 000 5 5 6 6 6 000 666666 77 666 5 77 4444 2222 77 666666666 5 0 0 1 6 6 6 66666 6 5 111 2 1 99 7 3 6 3 6 1 111 6 6 6 3 9999 6 1 1 6 6 4444 6 1 99 0000000000000 6 6 7 7 55 1 99 555 6 66666 3 8 444 8 6 11 222 0 8888888888888888 0 88 8 1 8 0 2222 6 888 6 6 6 1111111 3 6 3 6 6 6 99 6 2 4444444444444 2 5 1 6 66666 7777 3 8 8 0 0 999999 6 1 888888888 6 66666666666666666 3 5 22 8888 5555555555 0 5 6 55555555555555555555555 1 777 8 0 0 99 0 0 11 0 111 88888 111 6 66666 44444444444 3 6 888 0000 6 5555555 0 33 0 0 0 1111111111 1 666 000 00000000000 1 2 444 0 3333333333 333 0 2 888888 3333333333333 3 5 3 11111 3 5 0 6 0 1111 44 333333333333 9 0 0000 0 1111 2 3 0 0 33 9 11 3 99 33 777 444444 1 99999999999999999999 6 3333333 00 3 7 3 7 3 44 0 7 44 7777
lowQualScore : . ...... .. . . . . . .. . .. . . . . . . . . . .. . .. . ... . . . . . ... ...... .. ... . .. .... .... .. ......... . . . . . . . ..... . . ... . . .. . . . . . . ... . . . . .... . . . . . .... . . .. ............. . . . . .. . .. ... . ..... . . ... . . .. ... . ................ . .. . . . . .... . ... . . . ....... . . . . . . .. . . ............. . . . . ..... .... . . . . . ...... . . ......... . ................. . . .. .... .......... . . . ....................... . ... . . . .. . . .. . ... ..... ... . ..... ........... . . ... .... . ....... . .. . . . .......... . ... ... ........... . . ... . .......... ... . . ...... ............. . . . ..... . . . . . .... .. ............ . . .... . .... . . . . .. . .. . .. .. ... ...... . .................... . ....... .. . . . . . .. . . .. ....
lowQualScore : 0 000000 44 8 0 7 7 0 22 7 22 7 7 7 0 7 7 4 1 7 99 7 99 7 000 7 7 7 7 7 000 444444 99 111 7 99 3333 1111 44 666666666 7 4 7 5 7 7 7 77777 7 7 777 5 7 22 3 7 7 5 7 0 777 7 7 7 2 2222 7 0 0 7 7 2222 7 5 22 0000000000000 7 7 3 3 00 5 22 000 7 77777 5 0 000 0 4 00 000 6 2222222222222222 8 88 0 4 0 8 0000 7 333 7 7 7 2222222 0 7 3 7 7 7 22 7 5 7777777777777 5 7 6 7 77777 0000 8 0 0 0 0 222222 7 7 555555555 7 00000000000000000 2 5 00 0000 8888888888 8 0 0 44444444444444444444444 0 444 0 6 4 00 8 8 00 6 777 55555 777 7 77777 33333333333 5 7 222 0000 5 2222222 0 88 0 0 0 0000000000 0 555 000 00000000000 0 5 000 0 8888888888 555 2 5 888888 3333333333333 2 6 2 00000 2 5 0 0 8 2222 22 888888888888 2 8 0000 0 2222 5 2 0 0 55 8 00 2 00 88 555 555555 0 33333333333333333333 7 7777777 00 3 3 3 3 3 00 7 3 77 7777
consensus : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-CACCTCCC-------AAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAAACC--AAAA-GAAAAA-A-----AAATATCTAGCTAGC-AA---TT-TATCGAA--TAT--ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNNCCCCACC-ACCC-----CC--TTTCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTT--CGAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATACA-----G--TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAATCAAACATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCT--AAAAAAAAAANAAAAAC--GNAAAC-ACAAAA-A--CATACATGGAAA-TATACCCG-GTGTAG-TCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
Reference ( family-5052 ) : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-ACTATGGAAACAGGTG-AAATATNATCAA--ATTTGGCTA-TTTTCCAGAAAT--GGGTAGTTTTTGC-ACAAAAACTCAAAA-CAACAAAT-TATTAATTGTCTTANAATTGTATTTTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-CACCTCCN-------AAAAAATA-GCAGTGCTTTTTAAAACAACTAATTGATGTTTTTA-ATCAATCTAAAA-TA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGCTTGAAGACATGTGGCGTT-C-AAAAATACCT----CTCTATTCACCCATTCGAACAAAGAAA--GTGTG-AG----------GGAATG-CCAGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTGAACTGAGGTGAGTGTACAAACC--AAAA-GAAAAA-A-----AAATATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACGGAAGTGGCTTCCA-TCCCATGCATTTTTAAAAGGTTC----AATTATTGAAACC-ATA---GGAGC-ACG-T-AATGTTTCA-TATACAAATCTAA-GCATA-AAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------A-TAGCC-ATTAGGTG-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGNAT-ATGC-GTGCCTGACATAGCCT-AA-AATG------TT-AATATTGACCT-----TA-AAAATGATA-------G---------TATATAATGNNCCCCACC-ACCC-----CC--TTTCATGCTTGTAAA-C---------TT----------TTTGTTTTTTTTT--CGAAATACAT-CACAAGTAATAATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATACA-----N--TTGTAAAC-AAATTACAGATGT--G-CGCTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGC----G-C--GNTTGAT-ATTACACG-----TA-AC-GTCAANATGGAAGAA-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCC-------------TAATATACGCACTCTGAGTCTGAAATTGAGATAC--GT-TTTAATGTCTTTTGT-AAATTCGCAATC-ATTATAA----AATNTGT---ATC-TA---AAAATCAAACATTTATT--TAAT-TACTTT----TGATGATACTTGAAAAATA-TTTGT-GACTAATTTGAATATGAAN-AGAATTG-AAAATACTGAG--TACG---CTGGCT--AAAAAAAAAANAAAAAC--GNAAAC-ACAAAA-A--CATACATGGAAA-TATACCCG-GTGTAG-TCTTCATTTATACACT-GTACAA-GTCATAGAGCGGATTTAAGAGGGAGGGCCTGCCCCAGGAGCCCC
gi|1 : ATAAATGAGACATCTATAATAACA------TGTTTA-CAAA--TGTGCTCAAAAGTTA-AATGC-GATCATGGTTAACTATGGAAA-AGGTGAAAATATAATCAA--ATTT-GCTATTTTTCTAGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAATGGGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TA-TTTAATCTA-GGAGGAAAAAATTTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAAATCTC-CAA-TAAATCTGTAAAGTT-GT-TTTAAAGTTCAATTGAGA------GTTTTAAATGTCTT-TAAT-AACTTTT--ATT----CCAT----CTTACCTTCC--------AAAAATA-GCAATGC-TTTTAAAACAAGTCAATGATATTTTTATATCAATCT-AAA-TA-----AAACTCTTGGGAATCT-GCCTATTTAAACGCAATTTTCC--GGGGC-TGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTT-TTCCCTTTGGTAACTGCTTCAACGTAATT---AGGTAAGTAAAGGTTACATAGACAACACAAACAGT------------------TCACAACTGGT-GAATTTAGAATATGTGTACTCGCTTGAA-ACATGTGGCCCT-T-CAAAATACCT----CTCTATTCA-CCATTCGAACAAAACAACGGTGTG--G----------AGAATGCCCAGGT--AAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAACTGAG----GTGCACAAACA--AAAA-G-AAAA-A-----AATTGTCTAGCTAGCTAA---TTGTTTTAAATCTATCTACAGA----------------TAAAGGGGGTCGAGAAA-ATATTTC-AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTCA---AATTATTGAAACCTATAG--GGAGCAATGTT-AATATTTCA-TATACAAATCTAA-GAATA-AAGCAA-AATATTT-TGA--TT-TTATACCTA----------------AGCCTAATAGGTA-GTTGGTTT--GGAAACCCGATATCCC-CCTATATGAATCATGC-GTGCCTGACATAGCCT-AA-AATG------TTAAATATTAA
gi|1 : ------TC-AGTATTCACTTCATTGTA-AAAATGATA-------G---------TATA--ATGAACCCC-CC-ACCCACCCCCC--TTTCATGCTTGTAAAAC---------TTGTAGTGTAATTTTGTTTTGATTT---GAAATAGAC-CACAAGTAATAATGA-TTTCATAG-CAT--TATACAAAGT---AC-TT--AAATGA---TG-AATTTCTCTGTC-----ATACA-----ACTTTGTTA-C-AAATTA-ATATATTGG-CGCTCATGA-TAGATCATTCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----G-CCGGTTTG-T-ATTAGACG-----T------CCAATATGGAAGAC-CC-ATTGCATCA----------CATCTTGTACTCGATATTTATATA-----C------TTTGGGCC-------------TAATATACGCACT-----TCTGA----------------TCTAATGTCTTTTGT-AAATTCGCAATCAATT---------ATTTGT---ATC-CATATAAAATCCAACATTCA-----AAT-TACTTT----TGATGATACTTGAAAAATATTTTGT-GACTAATTTGAATAAGATT-AGAATTA-AAAATATTGAG--TACGCGCCTGACT------------TAAAAAT--GG------------------ACATGGAAATTATA-CCG-GTGTAA-CCTTCATTTATATACT-GT--AA-GTCATA-AGCAGATTTAAGAGGGAG-----GTCCAATGAGCCCCtataatgtttgataagctttatctatacaaatatatcagtaattgaagttcagtattcacttcattgtaaaaatgatagtataatgaaccccccacccacccccctttcatgcttgtaaaacttgtagtgtaattttgttttgatttgaaatagaccacaagtaataatgatttcatagcattatacaaagtacttaaatgatgaatttctctgtcatacaactttgttacaaattaatatattggcgctcatgatagatcattcatcctcatgtcagtgcatgctaaattgacactgtgccggtttgtattagacgtccaatatggaagacccattgcatcacatcttgtactcgatatttatatactttgggcctaatatacgcacttctgatctaatgtcttttgtaaattcgcaatcaattatttgtatccatataaaatccaacattcaaattacttttgatgatacttgaaaaatattttgtgactaatttgaataagattagaattaaaaatattgagtacgcgcctgacttaaaaatggacatggaaattataccggtgtaaccttcatttatatactgtaagtcataagcagatttaagagggaggtccaatgagcccc
gi|10 : ataaatgagacatctataataacatgtttacaaatgtgctcaaaagttaaatgcgatcatggttaactatggaaaaggtgaaaatataatcaaatttgctatttttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatgggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatatttaatctaggaggaaaaaattttaataatggacaatttgaagtgatttttataaatctccaataaatctgtaaagttgttttaaagttcaattgagagttttaaatgtctttaataacttttattccatcttaccttccaaaaatagcaatgcttttaaaacaagtcaatgatatttttatatcaatctaaataaaactcttgggaatctgcctatttaaacgcaattttccggggctgatttatggatggaaaggcttttttcatcaagagttttccctttggtaactgcttcaacgtaattaggtaagtaaaggttacatagacaacacaaacagttcacaactggtgaatttagaatatgtgtactcgcttgaaacatgtggcccttcaaaatacctctctattcaccattcgaacaaaacaacggtgtggagaatgcccaggtaagacgtttgcaggagatggagccatgttagtacaggtgaactgaggtgcacaaacaaaaagaaaaaaattgtctagctagctaattgttttaaatctatctacagataaagggggtcgagaaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaaattattgaaacctatagggagcaatgttaatatttcatatacaaatctaagaataaagcaaaatattttgattttatacctaagcctaataggtagttggtttggaaacccgatatccccctatatgaatcatgcgtgcctgacatagcctaaaatgttaaatattaatataatgtttgataagctttatctatacaaatatatcagtaattgaagtTCAATA-TAATAAACTACTGTTTTTCAAAAATGTGCTCAAAAGTTAGAATGCTGGTCATTGTT-CTTAATGAAACAGGTG-AAATATCATCAATTGTTTGCTTA-TTTTCCGAGAATTAAGGTAGTTATAACCACAAAAACTCAAAAACAACTAAT-TATTAATTATGTTAAAATTGTATTTTTCATATC-AAATAATCAAATAG-ATCCTACCATTTT-ATTTA-AGAGGAAAAT--GTCA-ATAATGGAC--AA-ATTGAAGTAATTTTTAAAA---TT-CAA-TATATCTG
gi|11 : ACAATGT---ACATT--A--TGA---TG-AATTTCTCTGTC-----ATATA-----G--TTGTAAAC-AA--TACAGATGT--G-CACTCATGACTA------CCATCCTACATGTCAGACTGCATAGCTAAATATGACATCTGCTCGGA-C--GCTTGAT-ATTACATGAGATATG-ACTGTCAAAATGAAGAAA-CCAATTCCATCAGTCTCTCCCCCATCTC-TGCTCGATATTTTTATACTTGTCTTTCAGTTTGGGCC-------------TAATATATGCACTCTGAGTCTG
gi|12 : TCATATCCAAATGATAACATATGATCCTAATCTTTTGATTTAAGGAGGAAAAA--ATTATATAATGGACCTAT-TTTGAAGTAATTTTCATAA---TTGCAAATAAATCTGTGAAGTTTGTGTTTAAA-TCCAAT---CAATTTTTTTTTT--GTGTC-AATAATCAACTTTTTAATTCTATCCACAGCCC-CGCCCCCCCCCAAAAAAAAAATAAGCAGTGCTTTTTAAAACAACT
gi|13 : -ATCATAA----AA-ACGTGAAATCCTA---AAAATCAAACGTTTAGT--TCTT-TACTGT----TGATGATACTTGAAAAATA-TATCT-GACTAATTTGAAT-TGAAC-AG-ATTGAAAAATACTACA--TACA---CTGGCT--AAAAAAAtt
gi|14 : TGCTGGGCATGGTT-ACTATGGAAACAGGTG-AAATATCATCAA--ATTTGGGTA-TTTTCCAGAAAT--GGGTGATTTTTGC-ACAAAAACTC-ACA-CAACAAAT-TATTAATTGTCTTAATATTGTATTTTT
gi|15 : CATG-TTATTAA-T---------TA----------TTTATTTATTTCT--TGAAATACATTCACAAGTAA-AATGG-TT-CATAGACAT--TAGACAATGT---ACATT--A--TGA---TT-AATTTGTCTGTC-----AT--A-----G--TTGTATAC-AAATTA
gi|16 : taaaTCCAAGACGTTTTGCTGGAGATAGAGCAAACTTTATCCATGTTAGTTCAGGTGAGTGTAAAAAAT--ATAA-AAAAAA-ATCCCCAAAAATCTAGCTAG
gi|17 : atgtgcaacataATATGCGTACTCTG------AAATTGAGATACATGT-ATT-ATGTC-TTTGT-AAATTTGCAATT-ATTA
gi|18 : AATGAGACATCTATA-TAACA------TGTTTT-CATAAATGTGCTCAAAAG
gi|19 : cg-TATTTTAATTTA-GGAGGAAAAA--TTTA-ATAATTTAC--AA-TTTGAA
gi|2 : ATGAATGAGACATCTATA-TAACA------AGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGGTCATGGTT-GCTATGGAAACCGGTG-AAATATAATCAA--ATTTGACTA-TTTTCCAAGAAT--GAGTAGTTTTTGC-A-AAAAAC-CAAAA-CAACAAAT-TATTAATTGTCTTACAATTGTATTTTTCAAATC-AAATGATAAAATAT-ATCCTA-TATTTTAATTTA-GGAGGAAAAA--TTTG-ATAATGGAC--AAATTTGAAGTGATTTTCATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------TCTTT--ATGTC-T-TAAT-AACTTTT--AT-C---CCAT----C-AACCTCCA-------AAAAAATA-GCAATGCTTTTTGAAACAACTAATTGATGTATTTA-ATCAATATAAAA-TA-----AAACTTTTGGGAATCTCGCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATT---AGGT-AGTAAA-GTTACATAGA-TACACAAATAATATGGCGGGATGATTGTTCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTT-C-CAAAATACCT----CTCTATTCA-CCATTCGAAGAAAGAAA--GTGTG-A-----------GGAATG-TCAGGTCCAAGACG-TT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTACAACCC--------------A-----AAATATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTCAAACTGAAGTGGCTTCCATTCCCATGCATTTTTAAAAGGTTCAATTAATTATTGAAACC-ATA---GGAGC-ACG-T-AAT--------------ATCTAA-GCATATAAGC-A-AATATTT-TGA--TT-TTCTACCTAGCCC---------ACTAGCC-ATTAGGTG-GTTGGATT--G--AACCCGATATCCC-TC-ATATGTAT-ATGG-GTGTCTGCCATAGCCTAAA-AATG------TT-AATATTGACCT-----TAGAAAATGATA-------GACTAGTACATGTATAATGCCCCCC-----CCC-----CC---------CTTGT--A-C---------TT----------TTTGTTTTATTTT---GAAATACAT-CACAAGTAA-AATGT-TTTCATAGACAT--TATACAATGT---ACATT--A--TGA---TG-AATTTCACTGTC-----AT--A-----G--TTGTAAAC-AAATTACAGATGT--GACACTCATGACTA------CCATCCT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GACA-GGTTG-T-ATTACATG-----TATAC-GTCAAAAT-GAAG-A-CC-ATTGCATCA----------CATCTC-TGCTCGATATTTTTATACTTGTC------TTTGGGCCTACATTTTTTTTGTAATATATGCACTCTGAGTCTGAAATTGAGATAC--AT-TTTAATGTC-TTTGT-AAATTCGCAATC-ATTATAA----AATTTGT---ATCATA---AAAATCAAGCATTTATTTATAAT-TACTTT----TTATGATACTTGAAAAATA-TTTGT-GACTAATTTAAATATGAAG-AGAATT--AAAATACTGAG--TACG---CTGGCCAAAAAAAAAAAAAAAAAAA--AAAAACAACAAAA-AACCATACATGGAA---ATACCC--GTGTAG-TCTTCATTTATACACTGGTACAA-GTCATAG-GCGGATTT-AGAGG--AGGCCTGCCCCAGGAGCCCC
gi|3 : ATAAATGAGACATCTATA-TAACA------TGTTTA-CAAAAATGTGCTCAAAAGTTA-AATGCTGATCATGGTT-ACTATGGAAACAGGTG-AAATATAATCAA--ATTTGGCTA-TTTTCTAGAAAT--GGGTAGCTTTTGC-ACAAAAACTCAAAA-CAGCAAAT-GGTTAATTGTCTTACAATTGTATTGTTCATATC-AAATGATAAAATAT-ATCCTA-TATTTTAATCTA-GGAGGAAAAA--TTTA-ATAATGGAC--AA-TTTGAAGTGATTTTTATAA---TT-CAA-TAAATCTGTAAAGTT-GTGTTTAAA-TTCAAT---GA------GTTTT--ATGTC-T-TAAT-AACTTTT--ATTC---CCAT----C-TACCTTCC-------AAAAAATA-GCAATGCTTTTTAAAACAAGTCATTGATATTTTTA-ATCAATCTAAAA-TA-----AAACTCTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATGGATGGAAAGGC--TTTTTTC-ATCAAG-AGTTTTTCCCCTTTGGTACT-CTTCAACGTAATT---AGGT-AGTAAA-GTTACATAGA-AACACAAAC--------------A-TG-TCTCACAACTGGTGGAATTTAGAATAT-TGTACTCGCTTGAAGACATGTGGCCTT-CAAAAAATACCT----CTCTATTCACCCATTCGAACAAAACAA--GTGTG-A-----------GGAATG-CCAGGTCCAAGACGTTT-GCAGGAGATGGAGCCATGTTAGTACAGGTGAAC-----TGAGTGCACAAACC--AAAA--AGAAA-A-----AATTGTCTAGCTAGC-AATTGTT-TAT-AAA--TCT--ACAGA----------------TAAAGGGGGTCGAGAAATA--TTTC-AATGGAAGTGGTTTTCA-TACCATGCATTTTTAAAACGTTC----AATTATTGAAACC-ATA---GGAGC-ATG-T-AATATTTCA-TATACAAATCTAA-GAATA-AAGC-A-AATATTT-TGA--TT-TTATACCTAGCCT---------A--A------TAGGTA-GTTGGTTT--G--AACCCGATATCCC-CC-ATATGAAT-ATGC-GTGCCTGACATAGCCT-AA-AATGTTAAATTT-AATATTGACCC-----TT-AAGATc
gi|3 : gcATA------TT-A-TATTG---------TA-AAAATGATA-------G---------TA-ATAATGCCCCCCACCCACCC-----CCCTTTTCATGCTTGTAAA-C---------TT----------TGTGTTTTTTTTTTGTGAAATACAC-CAC-AGTAATAATGTATTTCATAGA-AT--TATACAATGT---ACATTAAA--TGA---TGAAATTTCTCTGTC-----ATAC------T--TTGT-AAC-AAATTAC---TAT--T-CGCCGATGATCA----------CTT-CATGTCAG--TGCAT-GCTAAAT-TGACA-CTGT----GCC--GGTTGATCATTA---G-----CA-AC-GTCAATATGGAAGGACCC-ATTGCATCA----------CATC--------------TTTATACTTGTC------TTTGGtttgtaagctttatctattacaaatatatcagtacattgaattcatattatattgtaaaaatgatagtaataatgccccccacccaccccccttttcatgcttgtaaactttgtgttttttttttgtgaaatacaccacagtaataatgtatttcatagaattatacaatgtacattaaatgatgaaatttctctgtcatactttgtaacaaattactattcgccgatgatcacttcatgtcagtgcatgctaaattgacactgtgccggttgatcattagcaacgtcaatatggaaggacccattgcatcacatctttatacttgtctttggct
gi|4 : gcataaatgagacatctatataacatgtttacaaaaatgtgctcaaaagttaaatgctgatcatggttactatggaaacaggtgaaatataatcaaatttggctattttctagaaatgggtagcttttgcacaaaaactcaaaacagcaaatggttaattgtcttacaattgtattgttcatatcaaatgataaaatatatcctatattttaatctaggaggaaaaatttaataatggacaatttgaagtgatttttataattcaataaatctgtaaagttgtgtttaaattcaatgagttttatgtcttaataacttttattcccatctaccttccaaaaaatagcaatgctttttaaaacaagtcattgatatttttaatcaatctaaaataaaactcttgggaatctgcctatttaacgcaattcgaggggcatgatttatggatggaaaggcttttttcatcaagagtttttcccctttggtactcttcaacgtaattaggtagtaaagttacatagaaacacaaacatgtctcacaactggtggaatttagaatattgtactcgcttgaagacatgtggccttcaaaaaatacctctctattcacccattcgaacaaaacaagtgtgaggaatgccaggtccaagacgtttgcaggagatggagccatgttagtacaggtgaactgagtgcacaaaccaaaaagaaaaaattgtctagctagcaattgtttataaatctacagataaagggggtcgagaaatatttcaatggaagtggttttcataccatgcatttttaaaacgttcaattattgaaaccataggagcatgtaatatttcatatacaaatctaagaataaagcaaatattttgattttatacctagcctaataggtagttggtttgaacccgatatcccccatatgaatatgcgtgcctgacatagcctaaaatgttaaatttaatattgacccttaagattttgtaagctttatctattacaaatatatcagtacattgaattcAAT---GA------TTTTT--ATGTC-T-TAAT-CACTTTT--ATTC---CCAT----C-CACCTCCA-------AAAAAATA-GCAGTGCTTTTTGAAACAACTAATTGATGTTTTTA-TTCAATATAAAAATA-----AAACTTTTGGGAATCT-GCCTATTT-AACGCAATT---CGAGGGGCATGATTTATAGAGGGAAAGGC--TTTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CTTCAACGTCATTTATAGGT-AGTAAA-GTTGCATAGC-TACACAAATAATATGGCGGGATGA-GG-TCTCACAACTGGTGGAATTTAGAAGAT-TGTACTCGATTGAAGACATGTGGCGTTCC-AAAAATACCT----CTCTATTCACCCATTAGAAGAAAGGAA--GTGTG-A-----------GGAATG-TCTGGTCCAAGACGTTT-GCTGGAGATAGAGCCATGTTAGTACAGGTG-ACTGAGGTGAGTGTAC-AGCCAAAAAA-GAAAAAGA-----AAATATCTAGCTAGC-AA---TT-TATCGAA--TA---ACATGT--------------TTAAAGCGGGTCGAGAAATGT-TTTC-AACTGAAATGACTTCCA-TCCCATGCATTTTAAAAAGGTTCAATTAATTATTGAAACC-ATA---GGGGC-ACG-T-AAT--------------ATCTAA-GCATATAAGT-A-TATATTT-TAA--TT-TTCTACCTAGCCCAATACTGCAA-TAGCC-ATTAct
gi|4 : -ATTAG-TGCGTTGGATT--G--AACCCGACATCCCATC-ATATATAT-ATGCCGTGTCTGACATAGCCA-AACAATG------TT-AATATTGACCT-----TA-AGATTTATA-------ctggnnnnnnnnnnnnnnnnnnnnnnnnnaaattagtgcgttggattgaacccgacatcccatcatatatatatgccgtgtctgacatagccaaacaatgttaatattgaccttaagatttataaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|5 : aatgatttttatgtcttaatcacttttattcccatccacctccaaaaaaatagcagtgctttttgaaacaactaattgatgtttttattcaatataaaaataaaacttttgggaatctgcctatttaacgcaattcgaggggcatgatttatagagggaaaggctttttttaaccaagagttattcccctttgaaactcttcaacgtcatttataggtagtaaagttgcatagctacacaaataatatggcgggatgaggtctcacaactggtggaatttagaagattgtactcgattgaagacatgtggcgttccaaaaatacctctctattcacccattagaagaaaggaagtgtgaggaatgtctggtccaagacgtttgctggagatagagccatgttagtacaggtgactgaggtgagtgtacagccaaaaaagaaaaagaaaatatctagctagcaatttatcgaataacatgtttaaagcgggtcgagaaatgttttcaactgaaatgacttccatcccatgcattttaaaaaggttcaattaattattgaaaccataggggcacgtaatatctaagcatataagtatatattttaattttctacctagcccaatactgcaatagccattactggnnnnnnnnnnnnnnnnnnnnnnnnnaa-AACGCAATT---TGAGGGCCATGCTTTATAT-GGGAAAAGC--AGTTTTTAACCAAG-AGTTATTCCCCTTTGAAACT-CCACACCGTCATA---AGGT-AGTAAA-GTTACATACG-AACACAAATAATATGGCGGGATGA-TG-TCTTACAACTGGCGGATTTTAGAAGAT-TTTACTCGCTTAAAGACATTTCGCATT-C-AAAAATACCTCTCCCTCCAGTCACTCATTCAAACAAATAAA--GTGCG-AGGGCATATTACGGAATG-CCAGATCCAAGACGTTT-GCTGGACAAAGA---------------GTAAAC-GA-GTGAGTGTAGAACCC--AAAATGAAAAA-A-----AAA-ATCTGACTAGC-AA---TT-TATTGAA--TA---ACATGTTAATAAACCTACAGTTAAAGCAGGTCGAGAAATGT-TTTC-AGTGGAAGCGGGTTCCA-ACCCATGTATTTTC-AAGGGTTC----AATTATTGAAACA-ATA---GGAGC-ACG-T-GCTGTTTCA-TATACAAATATAA-GCATA-AAGC-A-AACATTC-TGA--TT-TTCAACCTAGCCC---------A--ATCT-AT---GTG-GTTGGTTT-----ATCCCGATATCCC-CC-Aaatcttttcatatcaaaatatatcagcattcacttaaccaatattgtaaatatata
gi|6 : ATAATTGAAAAA-AAATGGGGAGC-ACG-TTAATGTT-CACTATACACATCTAAAGCATA-AATC-ACAATACTTCTAAAGTTATTCTACCT----------------TAGCC-AGTAGGTG-GTTGGTTTCGG--GACCCGATATCCC-C--------AT-ATGC--TGCCTGA
gi|6 : ATTG---T-----TA-AAAATAATAACATGTAG---------TATA-AATGGAACCCACC-ACCC-----CC--CTCAATGATTGTAAA-CATGAGTTATTT----------TTTATTTTTTTTT--CGAAATACAT-CAT-AGTAA-AATGT-TTTCATAGACATTCTAGACAATATGTCACATT--ATCTGAATCTG-AATTTGT-TGTCTTTCGATACACTACTC--TTGTATACAAAATTAacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaattgttaaaaataataacatgtagtataaatggaacccaccacccccctcaatgattgtaaacatgagttattttttatttttttttcgaaatacatcatagtaaaatgttttcatagacattctagacaatatgtcacattatctgaatctgaatttgttgtctttcgatacactactcttgtatacaaaattagtcaatcgttgtcactcagctagtc
gi|7 : ataattgaaaaaaaatggggagcacgttaatgttcactatacacatctaaagcataaatcacaatacttctaaagttattctaccttagccagtaggtggttggtttcgggacccgatatccccatatgctgcctgaacaaacagttgttaccataacaaactataatcataaaaattaaaaggctgttacaattctattacaaatatatccagtattcacttaAA---AT-CAG-AAAGTC---AAAGTT-AT---TGA--TTAAAT---GA------CTTTT--ATGTC-T-CAAT-AACTTTT--ATTC---CCAT----C-CACCTCC---------AAACATG-GGAGTGTTTTTTAAAACAACTGATTTATGTTTTTA-ATAAATCTAAAA-TA-----AAACTTTTTGGCATCT-GCCTATTT-AACGCAATT---TCAGGGGCATGTTTTATGGGGGGAAAGGCGTTTTTTTTAA-CAAGCAGTTATTCCCCTTTGAAACT-CTTCAACGTTATA---AGGT-AGTGAA-GTTACATAGA-AACACAAATAATATGGCGGGATGA-TA-TCTCACAACTGGTGGAATTTAGAAGAT-TGAACTCGCTTGAAAGCATAAGGAGCT-C-AAAACTTCCC----AACTAGTCACC--------CAAAGAAA--GTGTGAAG----------GGCATG-TCAgtcaatcgttgtcactcagctagtc
gi|8 : TGCTGATCACTGTT-GGTATGGAAACTGGTC-AAATATTATCAA--AGTTGGCTA-TTTTCCAGAATT--CAGTAGTTTTTGC-ACAAATATTCAAAG-CAACAAAT-TATTGATTGTTTTAAAATTGTATTTTTCATTTC-TAATGATAAAATAA-ATCCTA-TATTTTAATTCG-AGAGG-AAAA--TTCA-ATAATGGAC--AA-TTTGAAGGGATTTTTATAA---TT-CAA-TAAGTCTGTGAAGTT-GTGTTTAAA-TCCAAT---GA------TTTTT--AAGTC-T-TAAT-AGCCTTT--ATT----CCAT----C-AACCTCTC-------AAAAAATA------GTTTTTTAAAACAAGTAATTTATGTTTTTC-ATAAAT-TAAAA-AAAACCCAAACTTTTGGGAATCT-GCCTATTT-Acggaataccaggccc
gi|9 : AATAGATG-ACTCTGAGTCTGAAATTGAGATACC-GTGTTTAATGTCTTTTGTGAAATTCGCAATCCATTATAACACAAATATGT---TT-------AAAATC---CATTTTTTA-TAAGATACTTTAGTTTGAT-ATACTTGAAAA----TTTGTTGACTAATT--AATTTGAAGGAGAATT--ATAATACTGAGATTACG---CTGGC---AATAAAAAAACCAAAACCAGCAAAC-ACAAAATA--CATA-ATGGAAA-TA--CCCGAGTGTAGGTCTTC-TTTATACAAT-GTACAAAGTCATAGAGCAG-TTTA-GAGGGAGGGCCTGCCCCAGGAGGCCC