lowQualScore : 1 444 2 33 2 2 2 33 2 777777
lowQualScore : . ... . .. . . . .. . ......
lowQualScore : 5 777 5 44 5 5 5 44 5 222222
consensus : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
Reference ( gi|79226 ) : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79227 : AATAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79228 : AAGAAGAGGA---AACAG-AGT--AAAAAGAA-TCTGT-TCCCACAC-TT--TG-T------TTGGGGAACATA
gi|79238 : AAGAAGAAGA---A---G-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGATACACA
gi|79229 : AAGAAGAAGA---AACAG---T--AAAAATAA-TATGT-TCC-AAAC-TT--TG-T------TTGGAGAACATA
gi|79230 : AAGAATAAGA---TACAG-GGT--AAAAACAG-TATCC-TCCCAAAC-TT--AG-T------TTAAGGAACAT
gi|79232 : AAGAATAAGA---AAAAG-AAG--AAGAAAAA-TATGT-TCCCAAAC-TT--CG-TTTAAAATTGGGGAACATA
gi|79231 : AATAATAAAA---AACAG-AGT--AAAAACCA-TA-GT-TCCCAAAC--T--TG--------TTGGGGAACATA
gi|79234 : AAGAG-AAGATCTAATAA-AGT--AAAAACAA-TTTGT-TCCCAAAC-TT--TG-T------TTTCAGAACATA
gi|79233 : AAAAAAAAAA---GACGG-AGC--AAAAACAA-TATGT-TCCCGAACATTCGTG-T------TCTAGGAACATA
gi|79236 : AATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79235 : AATAAGA---AACAG-AGT--AAAAACAAATATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79237 : aAATAAGA---AACAG-AGT--AAAAAACA-TATGTGGCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79239 : ATAAGA---AGCAGCAGTGTAAAAACAA-TATGT-TTTCAAAC-TT--TG-T------TTTGGGAACATA
gi|79240 : TAAGA---AACAG-GGT--AAAAACAA-TATTT-TCCC-AAC-TT--TGTT------TTGGGGAACAT
gi|79241 : AAGA---AGAAG-AGT--AAAAAATG-TATTT-TCACAAAC-TT--CG-T------TTGGGGAACATA
gi|79242 : AG-AAT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTAGGGAACATA
Alignments
lowQualScore : 0 444 2 33 2 2 2 33 2 666666
lowQualScore : . ... . .. . . . .. . ......
lowQualScore : 8 444 4 22 4 4 4 22 4 888888
consensus : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
Reference ( family-913 ) : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79226 : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79227 : AATAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79228 : AAGAAGAGGA---AACAG-AGT--AAAAAGAA-TCTGT-TCCCACAC-TT--TG-T------TTGGGGAACATA
gi|79229 : AAGAAGAAGA---AACAG---T--AAAAATAA-TATGT-TCC-AAAC-TT--TG-T------TTGGAGAACATA
gi|79230 : AAGAATAAGA---TACAG-GGT--AAAAACAG-TATCC-TCCCAAAC-TT--AG-T------TTAAGGAACAT
gi|79231 : AATAATAAAA---AACAG-AGT--AAAAACCA-TA-GT-TCCCAAAC--T--TG--------TTGGGGAACATA
gi|79232 : AAGAATAAGA---AAAAG-AAG--AAGAAAAA-TATGT-TCCCAAAC-TT--CG-TTTAAAATTGGGGAACATA
gi|79233 : AAAAAAAAAA---GACGG-AGC--AAAAACAA-TATGT-TCCCGAACATTCGTG-T------TCTAGGAACATA
gi|79234 : AAGAG-AAGATCTAATAA-AGT--AAAAACAA-TTTGT-TCCCAAAC-TT--TG-T------TTTCAGAACATA
gi|79235 : AATAAGA---AACAG-AGT--AAAAACAAATATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79236 : aAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79237 : AATAAGA---AACAG-AGT--AAAAAACA-TATGTGGCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79238 : AAGAAGAAGA---A---G-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGATACACA
gi|79239 : ATAAGA---AGCAGCAGTGTAAAAACAA-TATGT-TTTCAAAC-TT--TG-T------TTTGGGAACATA
gi|79240 : TAAGA---AACAG-GGT--AAAAACAA-TATTT-TCCC-AAC-TT--TGTT------TTGGGGAACAT
gi|79241 : AAGA---AGAAG-AGT--AAAAAATG-TATTT-TCACAAAC-TT--CG-T------TTGGGGAACATA
gi|79242 : AG-AAT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTAGGGAACATA
Alignments
lowQualScore : 0 444 2 33 2 2 2 33 2 666666
lowQualScore : . ... . .. . . . .. . ......
lowQualScore : 8 444 4 22 4 4 4 22 4 888888
consensus : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
Reference ( family-913 ) : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79226 : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79227 : AATAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79228 : AAGAAGAGGA---AACAG-AGT--AAAAAGAA-TCTGT-TCCCACAC-TT--TG-T------TTGGGGAACATA
gi|79229 : AAGAAGAAGA---AACAG---T--AAAAATAA-TATGT-TCC-AAAC-TT--TG-T------TTGGAGAACATA
gi|79230 : AAGAATAAGA---TACAG-GGT--AAAAACAG-TATCC-TCCCAAAC-TT--AG-T------TTAAGGAACAT
gi|79231 : AATAATAAAA---AACAG-AGT--AAAAACCA-TA-GT-TCCCAAAC--T--TG--------TTGGGGAACATA
gi|79232 : AAGAATAAGA---AAAAG-AAG--AAGAAAAA-TATGT-TCCCAAAC-TT--CG-TTTAAAATTGGGGAACATA
gi|79233 : AAAAAAAAAA---GACGG-AGC--AAAAACAA-TATGT-TCCCGAACATTCGTG-T------TCTAGGAACATA
gi|79234 : AAGAG-AAGATCTAATAA-AGT--AAAAACAA-TTTGT-TCCCAAAC-TT--TG-T------TTTCAGAACATA
gi|79235 : AATAAGA---AACAG-AGT--AAAAACAAATATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79236 : aAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79237 : AATAAGA---AACAG-AGT--AAAAAACA-TATGTGGCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79238 : AAGAAGAAGA---A---G-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGATACACA
gi|79239 : ATAAGA---AGCAGCAGTGTAAAAACAA-TATGT-TTTCAAAC-TT--TG-T------TTTGGGAACATA
gi|79240 : TAAGA---AACAG-GGT--AAAAACAA-TATTT-TCCC-AAC-TT--TGTT------TTGGGGAACAT
gi|79241 : AAGA---AGAAG-AGT--AAAAAATG-TATTT-TCACAAAC-TT--CG-T------TTGGGGAACATA
gi|79242 : AG-AAT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTAGGGAACATA
blockSeqs : TCT C GT A G A CG T TTAAAA
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blockSeqCons :
originalCons : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
finalCons : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
Alignments
lowQualScore : 0 444 2 33 2 2 2 33 2 666666
lowQualScore : . ... . .. . . . .. . ......
lowQualScore : 8 444 4 22 4 4 4 22 4 888888
consensus : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
Reference ( family-913 ) : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79226 : AAGAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79227 : AATAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79228 : AAGAAGAGGA---AACAG-AGT--AAAAAGAA-TCTGT-TCCCACAC-TT--TG-T------TTGGGGAACATA
gi|79229 : AAGAAGAAGA---AACAG---T--AAAAATAA-TATGT-TCC-AAAC-TT--TG-T------TTGGAGAACATA
gi|79230 : AAGAATAAGA---TACAG-GGT--AAAAACAG-TATCC-TCCCAAAC-TT--AG-T------TTAAGGAACAT
gi|79231 : AATAATAAAA---AACAG-AGT--AAAAACCA-TA-GT-TCCCAAAC--T--TG--------TTGGGGAACATA
gi|79232 : AAGAATAAGA---AAAAG-AAG--AAGAAAAA-TATGT-TCCCAAAC-TT--CG-TTTAAAATTGGGGAACATA
gi|79233 : AAAAAAAAAA---GACGG-AGC--AAAAACAA-TATGT-TCCCGAACATTCGTG-T------TCTAGGAACATA
gi|79234 : AAGAG-AAGATCTAATAA-AGT--AAAAACAA-TTTGT-TCCCAAAC-TT--TG-T------TTTCAGAACATA
gi|79235 : AATAAGA---AACAG-AGT--AAAAACAAATATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79236 : aAATAAGA---AACAG-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79237 : AATAAGA---AACAG-AGT--AAAAAACA-TATGTGGCCCAAAC-TT--TG-T------TTGGGGAACATA
gi|79238 : AAGAAGAAGA---A---G-AGT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTGGGATACACA
gi|79239 : ATAAGA---AGCAGCAGTGTAAAAACAA-TATGT-TTTCAAAC-TT--TG-T------TTTGGGAACATA
gi|79240 : TAAGA---AACAG-GGT--AAAAACAA-TATTT-TCCC-AAC-TT--TGTT------TTGGGGAACAT
gi|79241 : AAGA---AGAAG-AGT--AAAAAATG-TATTT-TCACAAAC-TT--CG-T------TTGGGGAACATA
gi|79242 : AG-AAT--AAAAACAA-TATGT-TCCCAAAC-TT--TG-T------TTAGGGAACATA